BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15269
         (1858 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 375/1009 (37%), Positives = 566/1009 (56%), Gaps = 112/1009 (11%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADK---- 92
            +L N VL TS  +++ LPPL LSN+TQL++LGI SL QVS FL+  V + SP AD     
Sbjct: 180  SLCNSVLETSFDLLQKLPPLCLSNDTQLTNLGITSLEQVSDFLKDAVLN-SPNADSHAKL 238

Query: 93   -------------------------TVQSSLRSRVPLTKSLPPYNAALNLLE-------- 119
                                      + +S ++   L  S   + +A+  LE        
Sbjct: 239  LSCKLLLALALQRGSLRYLLDWIEMVLDASCKTEGILCDSF--FKSAIMQLESGKYKIKS 296

Query: 120  EVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIG 179
            ++ +  T  +V +  +A  +  IL  +A D     G   S+     +++TS         
Sbjct: 297  DLWKGQTSSEVSVYEAAINLMEILAGMAID----FGGVCSA-----VETTS--------- 338

Query: 180  DTDISV-AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            ++++ V   S VY WG N  HQ+ +  + K   P    + + ++ +EAGQ+CTF +   G
Sbjct: 339  ESEVGVYEKSDVYVWGSNSSHQLAEGNQEKILMPVKSKMFTQVQQVEAGQYCTFAIHWDG 398

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
             +   GKG    LGL  ++ Q LPKR+ L+  +  LS SK S+ H L +   G VYSWG 
Sbjct: 399  SVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSWGD 458

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            G++GKLGHGN  + ++P+ I G   GK +  + AG+ HSAAVT+DG LYTWGEGDHGRLG
Sbjct: 459  GDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLG 518

Query: 356  HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            HGD  +R+ PT V  L++VG+V+CG SHTLV+S+DG TVWS GSG  GKLG  + GKV  
Sbjct: 519  HGDSNARYVPTQVAGLAEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKVYR 578

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSS 471
            P+V+EAL+   ++KVCAGT FS+ALT  G V+ WG    LG  S+    + P+ V  L+ 
Sbjct: 579  PQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSADAIVNLPMYVEDLAQ 638

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
            ++IVD+S GD+H LAL+  +EV+AWG+N+MGQCGQ +  +P+ +P KV+GLE V +RQI 
Sbjct: 639  YRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPITRPLKVIGLEGVSIRQIS 698

Query: 532  AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACF--ETGDYIPFCS 589
            AG+  S+A+T   + +   +   P C+D+   TF L+++FLE+Y+  F  ET    PF +
Sbjct: 699  AGTSHSMAWTSMSTENHHMTKHKPFCLDLHEKTFILLKKFLEKYTVSFIYETPP-PPFKT 757

Query: 590  KVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLT 649
               H +F+LL L+LL +HL L + G  S ++L N T  LR +LF+LVD++T PEI + + 
Sbjct: 758  ATEHHRFVLLTLKLLCTHLSLCINGNLSDNILSNHTKQLRLILFRLVDIKTPPEIYSTVI 817

Query: 650  DCLAIGASLLLPPVVEQLDLLKTLLSQDHPLSNGQRMLLGVITSSLHKNEELAHIFYFDQ 709
            + + +GASLLLP + E+++ +   LS+D  L+ GQ+MLL ++  SL     +A +    +
Sbjct: 818  ELINVGASLLLPQLQERVEFVHEHLSKDG-LTQGQQMLLNIVLCSLEDPAHIAALLRIQE 876

Query: 710  NQDTNILM----------LEDLLKISCRKSYAYTLTHFQSNACKVSPQETPVSQVVTLLQ 759
             Q T  LM           ED L  S +K      T    NA   S  +T + ++++ LQ
Sbjct: 877  QQLTETLMSTLLQSFSKLTEDTLD-SVKKYMETQPTDEWKNA--ASTTQTHLQKLLSSLQ 933

Query: 760  SLIITQYVVKHSEICEEVYQHYLDIVFPHVIDILERSIAWVNQ-GKDIEVLNELLYNSLA 818
            + ++   V+K+++I   ++ H L+ +FP +I +LE+S   + Q    +E+L  +L +S++
Sbjct: 934  NHLLAHVVIKNNQIFHILHNH-LNQLFPLIIRVLEKSACILEQYPPSLELLYNVLLDSVS 992

Query: 819  GKILFSIVHSLLINIHRSMYPTLRYFLAILPLLDSLNQLLPMQ--------GNYTET--- 867
            G +   ++ SLL+     +   L   L +L  LD  N+LLP++         + +ET   
Sbjct: 993  GSMFLKLLSSLLLIPPVFIKELLPELLNVLVSLDRFNKLLPVEITNDVSTVSSRSETPTL 1052

Query: 868  -----NSFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTA 922
                  S+LW+ID++R  +LLIG+ LG    G P   EE    +WL T L SAG+     
Sbjct: 1053 AQLADQSWLWIIDLQRTCSLLIGECLGGAFAGDPPTIEEISCWNWLNTDLFSAGIVND-- 1110

Query: 923  IIDID-KFVRDMRHVS-----NNILMS-PNYESDVNKYSVLLKYIPQQY 964
              DID + V DM H +     + +L+S  N    V  Y  L   +PQQY
Sbjct: 1111 --DIDVQTVVDMSHTALLNLQDALLISLENMSPTVQNYCKLAFKLPQQY 1157



 Score =  329 bits (844), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 186/438 (42%), Positives = 268/438 (61%), Gaps = 26/438 (5%)

Query: 1279 ERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLLSISP---SGLCKLNLLRARLLTL 1335
            +++   +L F+  + S   +  +LA++ W+++LL +L  S    S   +L LLR +++ L
Sbjct: 1543 DKSFGDFLVFLRVIGSSKVIKTVLASKKWLEALLSVLDTSDLFMSYPVQLKLLRPKMMVL 1602

Query: 1336 NLLTAILPHAQQGEL------GIITELLTQLSHNMWKVPRTVAHHNALKKEE-ELDKQIE 1388
             +L  ILP  Q   L       ++ +L TQL   +WK   T +    L + E +L+  ++
Sbjct: 1603 QILQNILPGLQPKFLPSDLRKSVVNKLFTQLGKELWKKTSTESLPTQLVESELKLNDLLD 1662

Query: 1389 HLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGIT 1448
                           +  + +  + FD  KC  C +E    +L+HG G RGYG+    I 
Sbjct: 1663 E------------DEEENIPVHDMGFDINKCHNCVIE-SNLTLVHGFGGRGYGLGLQAIR 1709

Query: 1449 RGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTML 1508
             GCYQWK LIV E++GNEGTCIGV+++P+RD++HR+T DMWLYRAYSG++YHSGE+    
Sbjct: 1710 SGCYQWKILIVKENRGNEGTCIGVSKFPVRDFSHRSTTDMWLYRAYSGSLYHSGERDISF 1769

Query: 1509 PSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKI 1568
              +TQGDYITVVLDMDA+TLSFGKNGEEP +AF++++ +  LYP V+FYST   GEKVKI
Sbjct: 1770 QCYTQGDYITVVLDMDAKTLSFGKNGEEPRVAFENIEATE-LYPCVMFYSTGP-GEKVKI 1827

Query: 1569 TDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKE 1628
            TDM V    RDLL GEP  AP+P ++ E+Y++L+R+LH  D W   VN  ++DRLS I++
Sbjct: 1828 TDMKVHSKQRDLLPGEPNLAPLPAVLTEAYVTLIRRLHNADAWTNEVNSAIIDRLSRIED 1887

Query: 1629 LTAAAEEDNASAFVPQADKGRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKP 1688
            L       N+     + +     +  +++  LC  VWPALV +GG D GLR+GG C  K 
Sbjct: 1888 LFEQIHFYNSDGEESEENSNSRDM-YSKINELCLTVWPALVTIGGFDRGLRIGGYCKHKG 1946

Query: 1689 SGRVGTLLGTLKEGIAKV 1706
            +GR   +LG LK+GI  V
Sbjct: 1947 TGRRAIVLGILKKGITTV 1964



 Score =  214 bits (544), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 19/370 (5%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-- 246
            K Y WG + H Q L E+    S P      S  R I  GQ CTF++ S G +L  G+G  
Sbjct: 3328 KAYMWGSDRHGQ-LAELGYSASVPVQVESFSIARKIICGQNCTFVIQSDGTVLACGEGSY 3386

Query: 247  -WLGLANTT-IQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG  N+  +  L     L+  +++ L+ S  S+ H L +   GEV+SWG G+ GKLGH
Sbjct: 3387 GRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGH 3446

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN   QRRP+ I   L  ++V QV+ G  HSA VT DG L+T+G GD G+LG G + ++ 
Sbjct: 3447 GNPDRQRRPRQIEA-LQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKK 3505

Query: 364  TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
             P  V  L    +G V+CG +HT  +S DG TVW+ G G+ GKLG         P+ +E 
Sbjct: 3506 LPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVET 3565

Query: 422  LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-------LRSSSISFHTPVLVTGLSSHQI 474
            +    ++KV  GT  ++ LT DG VF  G+         R  ++    P ++T LS + I
Sbjct: 3566 VCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAV--FKPQIMTSLSDYSI 3623

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             D+++G  HVL L+   +V  WG    GQ G  + S  V  P  +  L D  +RQI  G 
Sbjct: 3624 EDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVS-LVRHPEIITELSDKGIRQISTGR 3682

Query: 535  LFSIAYTVPP 544
              S A++ PP
Sbjct: 3683 THSAAWSAPP 3692


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 374/1008 (37%), Positives = 550/1008 (54%), Gaps = 124/1008 (12%)

Query: 38   LGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD------ 91
            L N V+ T++ +V +LP LSL+NE+++  +G++ L+QV+TFL+  VT  +  AD      
Sbjct: 195  LCNDVIHTAIDVVSSLPALSLANESKIPPMGLDCLSQVTTFLK-GVTMPNSGADILGRRL 253

Query: 92   --------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLIL 143
                     + + SLR  +   +     +A ++ +E+        Q  LI   C + +++
Sbjct: 254  ASELLLGLASQRGSLRYLLEWIEMALAASAVVSTMEQ--NKLLQNQEGLISYDCFMNILM 311

Query: 144  V-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIGD 180
                              T   D +  L +       +     +D   T     +   G+
Sbjct: 312  QMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCVSPDSIQTGE 371

Query: 181  TDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
            T +     +VY WG N  HQ+++  + K  +P+L S  ++ + IEAGQ+CTF++ S G +
Sbjct: 372  TPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFADAQTIEAGQYCTFVISSDGSV 431

Query: 241  LVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
               GKG    LGL ++  Q   K++  E   AI  +S SK S+ H L  T+EGEV+SWG 
Sbjct: 432  RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGD 491

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAV+EDG LYTWGEGD GRLG
Sbjct: 492  GDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG 551

Query: 356  HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            HGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V  
Sbjct: 552  HGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK 611

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSS 471
            PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L++
Sbjct: 612  PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAT 671

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             ++VD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV+GL+ V ++QI 
Sbjct: 672  TRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQIS 731

Query: 532  AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETG-DYIPFCSK 590
            AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y     +    +PF S 
Sbjct: 732  AGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERYCDGINSEVPPLPFPSS 791

Query: 591  VTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTD 650
              H  F+ L LRLLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+  + +
Sbjct: 792  REHHNFLKLCLRLLSNHLALALAGGVATSILGRQARPLRNLLFRLMDSSVPDEIQEAVIE 851

Query: 651  CLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAHIFY 706
             L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A +  
Sbjct: 852  TLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLLG 911

Query: 707  FDQNQD-------------------------TNILMLEDLLKISCRKSYAYTLTHF---- 737
            +    D                          +  + E L+K   R    YT   F    
Sbjct: 912  YSSPADGPEVLSSGPAFTALPEPAYGTTTGHPDTHLAEILMKTLLRNLGFYTDQAFGELE 971

Query: 738  -------QSNACKVSPQETPVSQVVTLLQS-LIITQYVVKHSEICEEV--YQHYLDIVFP 787
                   Q  +   S Q   + Q++  LQ  L+   ++   +E    V     +L ++ P
Sbjct: 972  KNSDKLQQGTSSSDSSQPAHLHQLLCSLQKQLLAYCHINSVTENSSSVSLLHKHLQLLLP 1031

Query: 788  HVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPT 840
            H  DI  RS A + +    G   E L +++Y S AG +L  I+++LL   +++ R +   
Sbjct: 1032 HATDIYSRSAALIKESSWNGSIREKLQDVIYVSAAGSMLCQIINALLLLPVSVARPLLSQ 1091

Query: 841  L-----------RYFLAILPLLDSLNQLLPMQG--NYTETN----------SFLWLIDME 877
            L           R   A  PL D   Q  P+QG  ++ E            S++WL+D+E
Sbjct: 1092 LLELLPPLDCLNRLLPAASPLEDQELQ-WPLQGTSDFAEPASGMTLPQPALSWVWLVDLE 1150

Query: 878  RALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            R +ALL+G+ LG ML G P + EE +TV+WLKT L S GLE     +D
Sbjct: 1151 RTVALLVGRCLGGMLQGAPTSLEEQDTVYWLKTPLFSNGLEMDIPQLD 1198



 Score =  385 bits (990), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/566 (40%), Positives = 311/566 (54%), Gaps = 73/566 (12%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI+   + + L+  V   L   L   L+ LL  +           
Sbjct: 1823 STALKVASTRLLQILAISTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVSLLHAGKEQ 1882

Query: 1264 ------DTQGNLEHDVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLL 1312
                  D+  +   D        HT E +L  +L F+  + S   +   +A+  W + LL
Sbjct: 1883 EDGKHEDSADSERKDFRALLRKQHTAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLL 1942

Query: 1313 YLLSISP-SGLCKLNLLRARLLTLNLLTAILPHAQQGE-----LGIITELLTQLSHNMWK 1366
             + +    SG+  +  LR RLL L++L A+LP  +          +I  L + LS  MW+
Sbjct: 1943 NIAAQKCCSGVPLVGNLRTRLLALHVLEAVLPACEASMEDDQMTQVIERLFSLLSDCMWE 2002

Query: 1367 VPRTVAHHNALKKE--EELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTV 1424
             P     H+   KE  +EL  Q+    C    G +    +  + I  +SFD EK  CC V
Sbjct: 2003 GPIAQTKHSIQIKEKVQELKLQV----CLNSQGDTEEEDEN-LPIQEISFDPEKAQCCVV 2057

Query: 1425 ECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRT 1484
            E  GQ L HG G +GYG+A+ GI+ GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRT
Sbjct: 2058 E-NGQGLTHGSGGKGYGLASTGISSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRT 2116

Query: 1485 TGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDL 1544
            T DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+
Sbjct: 2117 TSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTVSFGKNGEEPKLAFEDV 2176

Query: 1545 DTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQ 1604
            D +  LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I L+R 
Sbjct: 2177 DATE-LYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPVCSPVATVLAEATIQLIRI 2234

Query: 1605 LHKIDRWKAHVNQCLLDRLSVIK---------------------------ELTAAAEEDN 1637
            LH+ D W   +N+ +++RL  IK                           E      E  
Sbjct: 2235 LHRTDHWTHRINKTMIERLHKIKPCFRESAGASGGGLGQRLKKSRSVQSREEHDTQRESQ 2294

Query: 1638 ASAFVPQADKGRL-------VLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSG 1690
             +      +KGR         L E  +  LC EVWP L V+GG D GLR+GG+CV K +G
Sbjct: 2295 ETPTRTDEEKGRHGRQHGLGELSEHHLRTLCTEVWPVLAVIGGADAGLRVGGRCVHKQTG 2354

Query: 1691 RVGTLLGTLKEGIAKVKDLNFDEIDL 1716
            R  TLLG  KEG    K + +DE ++
Sbjct: 2355 RHATLLGVTKEGSTSAK-VQWDEAEV 2379



 Score =  244 bits (624), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/366 (40%), Positives = 208/366 (56%), Gaps = 15/366 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            V+ WG   H Q+ +  R     P +    S  + +  GQ CTF++   G +L  G+G   
Sbjct: 4074 VFLWGAGRHGQLAEAGRNILV-PTIAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYG 4132

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4133 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4192

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4193 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 4251

Query: 365  PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    VG V+CG +HTLV+S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4252 PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4311

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG VF +G    +GL       H  P  V GLS   I DV
Sbjct: 4312 CGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDV 4371

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H L LS   +VY WGSN+ GQ G  + +N V +P+ V  L+   + QI AG   S
Sbjct: 4372 AVGAEHTLVLSSTGDVYTWGSNSEGQLGLGH-TNHVREPTLVTTLQGKNIHQISAGRCHS 4430

Query: 538  IAYTVP 543
             A+T P
Sbjct: 4431 AAWTAP 4436


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  561 bits (1445), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 548/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKNKLLSSQEGMISFDCFMAI 302

Query: 142  I------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLTYNI 178
            +      L + AD +      R S                     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVD+SIGDSH L+LS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSTVCMGYGNLSDQPYGPQTCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACK----VSPQETPVSQ-----VVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K     SP E          + +L + L+   ++   +E    V     +L 
Sbjct: 961  GELEKNSDKYLFGTSPSENSQPAHLHELLCSLQKQLLAFCHINNITENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLLINIHRSMYP 839
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL+       P
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVAPP 1080

Query: 840  TLRYFLAILPLLDSLNQLLPMQGNYTE------------------------TNSFLWLID 875
             L Y L +LP LD LN+LLP      +                          S++WL+D
Sbjct: 1081 FLSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEG 1867

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 1868 EEVEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 1927

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 1928 TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 1987

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 1988 DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 2033

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 2034 DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 2092

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 2093 WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 2152

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 2153 EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 2210

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 2211 AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEVREE 2270

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 2271 KENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 2330

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 2331 TLLGVVKEGSTSAK-VQWDEAEI 2352



 Score =  247 bits (630), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3997 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4056 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4115

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4116 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4234

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4235 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4294

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4295 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4353

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4354 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGAVRE 4389


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 374/1009 (37%), Positives = 545/1009 (54%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 185  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 243

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 244  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 301

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 302  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 361

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            DT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 362  DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 421

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 422  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 481

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 482  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 541

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 542  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 601

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 602  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 661

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 662  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 721

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 722  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 779

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 780  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 839

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 840  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 899

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 900  LLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 959

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 960  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1019

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1020 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1079

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1080 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGMPLPQPAQSWVWLVDL 1139

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1140 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1188



 Score =  395 bits (1015), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/562 (40%), Positives = 315/562 (56%), Gaps = 78/562 (13%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1815 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1874

Query: 1264 ---------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWI 1308
                     D+ G  E           H  E +L  +L F+  + S   +   +A+  W 
Sbjct: 1875 EEDEEGKKIDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWT 1934

Query: 1309 QSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLSH 1362
            + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS 
Sbjct: 1935 EVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSD 1994

Query: 1363 NMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSFD 1415
             MW+ P   A H    KE+E + +++              +QG ++       I  VSFD
Sbjct: 1995 CMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSFD 2040

Query: 1416 KEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRW 1475
             EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RW
Sbjct: 2041 PEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRW 2099

Query: 1476 PIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGE 1535
            P+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGE
Sbjct: 2100 PVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGE 2159

Query: 1536 EPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMV 1595
            EP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ 
Sbjct: 2160 EPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLA 2217

Query: 1596 ESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK-------- 1647
            E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +        
Sbjct: 2218 EATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREEK 2277

Query: 1648 -------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGT 1694
                         G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  T
Sbjct: 2278 ENKEEEKGKHSRHGLADLSEPQLRTLCLEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHAT 2337

Query: 1695 LLGTLKEGIAKVKDLNFDEIDL 1716
            LLG +KEG    K + +DE ++
Sbjct: 2338 LLGVVKEGSTSAK-VQWDEAEI 2358



 Score =  239 bits (609), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/406 (37%), Positives = 219/406 (53%), Gaps = 28/406 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4001 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4059

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4060 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4119

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4120 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4178

Query: 365  PTLVTELS--DVGA----------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
            P  VT L    +G           V+CG +HTL +S DG  VW+ G G+ GKLG  ++  
Sbjct: 4179 PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4238

Query: 413  VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVT 467
             ++P+ ++ L    ++KV  GT FSVALT DG V+ +G    +GL       H  P  + 
Sbjct: 4239 KSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIP 4298

Query: 468  GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCV 527
             L+   I DV++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   V
Sbjct: 4299 VLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNV 4357

Query: 528  RQICAGSLFSIAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
            RQI AG   S A+T PP          PL +   D  P  +  +RE
Sbjct: 4358 RQISAGRCHSAAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4403



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            ++  I+S + S+  + H+     + +VY WG G HG+L        R   +        +
Sbjct: 3978 MDEQIMSWATSRPEDWHL---GGKCDVYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ 4030

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSC 379
              QV  G + +  +  +G +   GEG +GRLG G+    H  T+++ L          SC
Sbjct: 4031 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4090

Query: 380  G-ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
            G + H++ L++ G  V+S G G+ GKLGH ++ +   P+ IEAL+   V ++  G   S 
Sbjct: 4091 GSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA 4149

Query: 439  ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI----------VDVSIGDS 482
             +T DG +F +G      LGL ++S +   P  VT L  +QI          + V+ G +
Sbjct: 4150 VVTSDGKLFTFGNGDYGRLGLGNTS-NKKLPERVTALEGYQIGQARNNTLFFLQVACGLN 4208

Query: 483  HVLALSQYNE-VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            H LA+S     V+A+G    G+ G  N S     P KV  L  + ++++  G+ FS+A T
Sbjct: 4209 HTLAVSADGSMVWAFGDGDYGKLGLGN-STAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4267


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 385/1019 (37%), Positives = 561/1019 (55%), Gaps = 135/1019 (13%)

Query: 38   LGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD------ 91
            L N V+TT++ +V +LPPLSL+NE+++  +G++ L QV++FL+  VT  +  AD      
Sbjct: 188  LCNDVITTAIEVVGSLPPLSLANESKIPPMGLDCLAQVTSFLK-GVTMRNSGADVVGRRL 246

Query: 92   -------------------KTVQSSLRSRVPLT------KSLPPYNAALNLLEEVLRP-- 124
                               + V+ +L +   ++      + L  Y+  +N+L ++ R   
Sbjct: 247  ACELLLGLAAQRGSLRYLLEWVEMALAASAGVSSLEQSQEGLMGYDCFMNILMQMRRSLG 306

Query: 125  --ATHYQ-VDLIRSA---CLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNI 178
              A   Q  +  R+A   C +Y   + L ++  +   D   + ++ D         +   
Sbjct: 307  SSADRSQWREPTRTADGLCSLYEAALCLFEEVCRMASDYSRTCASPD---------SIQA 357

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            G+  +     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ S G
Sbjct: 358  GEAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISSDG 417

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   AI  +S SK S+ H L  TSEGEV+SW
Sbjct: 418  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSW 477

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAV+EDG LYTWGEGD GR
Sbjct: 478  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGR 537

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 538  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 597

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 598  YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 657

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ ++VD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV+GL+ V ++Q
Sbjct: 658  ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQ 717

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C    + I   P
Sbjct: 718  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDGINNEIPPLP 775

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L LRLLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 776  FPSSKEHHNFLKLCLRLLSNHLALALAGGVATSILGRQARPLRNLLFRLMDASVPDEIQE 835

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
             + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 836  AVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 895

Query: 703  HIFYF------------------------DQNQDTNILMLEDLLKISCRKSYAYTLTHF- 737
             +  +                        D + DT+  + E L+K   R    YT   F 
Sbjct: 896  SLLGYSCPPDASEPPAQPSDSTHVPGTHSDTHPDTH--LAEILMKTLLRNLGFYTDQAFG 953

Query: 738  --QSNACKV--------SPQETPVSQVVTLLQS-LIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K+        S Q   + +++  LQ  L+   ++   +E    V     +L +
Sbjct: 954  ELEKNSDKILQGTSSSDSSQPAHLHELLCSLQKQLLAYCHINSVTEGSSSVALLHKHLQL 1013

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLLINIHRSMYPT 840
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV SLL+       P 
Sbjct: 1014 LLPHATDIFNRSATLLRESSGNGSVREKLRDVIYMSAAGSMLCQIVTSLLLLPVWVARPL 1073

Query: 841  LRYFLAILPLLDSLNQLLPMQGNYTE----------------------TNSFLWLIDMER 878
            L + L +LP LD LN+LLP      E                        S++WL+D+ER
Sbjct: 1074 LSFLLDLLPPLDRLNKLLPAATPLEEQELQWPLHGSPDLVDPVCVSGPAQSWVWLVDLER 1133

Query: 879  ALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIIDIDKFVRDMRHVS 937
              ALL+G+ LG ML G   + EE  T HWLKT L S GLE  T I  +D  +  +  V+
Sbjct: 1134 TAALLVGRCLGGMLQGAAPSAEEQHTTHWLKTPLFSNGLE--TEIPQLDACISSLLEVA 1190



 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/553 (40%), Positives = 310/553 (56%), Gaps = 64/553 (11%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI+   + + L+  V   L   L   L+TLL  +           
Sbjct: 1790 STALKVASTRLLQILAISTGTYADRLSPKVVQALLDLLCSQLKTLLAQAAGNSLIASTDL 1849

Query: 1264 -----DTQGNLEHDVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLY 1313
                 D     + D        HT E +L  +L F+  + S   +   +A+  W + LL 
Sbjct: 1850 QEKTDDCADAQKKDFRALLRKRHTAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLN 1909

Query: 1314 LLSISP-SGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLSHNMWKV 1367
            + +    SG+  +  LR RLL L++L A+LP  +          ++  L + LS  MW+ 
Sbjct: 1910 IAAQKCCSGIPLVGNLRTRLLALHVLEAVLPACESSVEDHQMTQVVERLFSLLSDCMWEA 1969

Query: 1368 PRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECG 1427
            P   A H    KE E + +++        G ++   +  + I  V+FD EK  CC VE  
Sbjct: 1970 PVAQAKHTIQLKEREQELKLQ--------GETDEEEEN-LPIQEVTFDPEKAQCCVVE-S 2019

Query: 1428 GQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGD 1487
            GQ L HG G +GYG+A+ GI+ GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRTT D
Sbjct: 2020 GQGLTHGSGGKGYGLASTGISSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTAD 2079

Query: 1488 MWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTS 1547
            MWLYRAYSGN+YH+GEQT  L S+TQGDYIT VLDM+A+T+SFGKNGEEP LAF+D+D +
Sbjct: 2080 MWLYRAYSGNLYHNGEQTLTLSSYTQGDYITCVLDMEARTVSFGKNGEEPKLAFEDVDAT 2139

Query: 1548 APLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHK 1607
              LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+   L+R LH+
Sbjct: 2140 E-LYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVATVLAEATTQLIRILHR 2197

Query: 1608 IDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQA---------------------D 1646
             +RW   +N  +L RL  I+           S  + ++                      
Sbjct: 2198 SERWTQTINHSILQRLQQIRSCLRDGAPPAGSTRLRKSRSAQSREEQDEKEEEREEERGR 2257

Query: 1647 KGRLV---LEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGI 1703
             GR     L EA +  LC +VWP L V+GG D GLRMGG+CV K +GR  TLLG +KEG 
Sbjct: 2258 SGRHAAAELPEAHLRTLCHQVWPVLAVIGGVDGGLRMGGRCVHKQTGRHATLLGVVKEGS 2317

Query: 1704 AKVKDLNFDEIDL 1716
               K + +DE ++
Sbjct: 2318 TSAK-VQWDEAEI 2329



 Score =  243 bits (619), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/399 (38%), Positives = 221/399 (55%), Gaps = 24/399 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            V+ WG   H Q+ +  R     P L    S  + +  GQ CTF++ + G +   G+G   
Sbjct: 3984 VFLWGAGRHGQLAEAGRNILV-PTLAPSFSQAQQVVCGQNCTFVIQANGTVSACGEGSYG 4042

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4043 RLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4102

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+++G GD+GRLG G+  ++  
Sbjct: 4103 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKL 4161

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  V+ L    VG V+CG +HTL +S DG TVW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4162 PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4221

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+   I DV
Sbjct: 4222 CGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQVPALTGVFIEDV 4281

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H L LS   +VYAWGSN+ GQ G  + +N V +P+ +  L+   ++QI AG   S
Sbjct: 4282 AVGAEHTLTLSSTGDVYAWGSNSEGQLGLGH-TNHVREPTLISALQGKNIQQISAGRCHS 4340

Query: 538  IAYTVPPSNSALSSAFTPL------CVDVRPHTFTLIRE 570
             A+T PP       +  PL      CV   P  ++ +RE
Sbjct: 4341 AAWTAPPVPPRAPGSSVPLQLGLPVCV---PPQYSALRE 4376


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 374/1009 (37%), Positives = 545/1009 (54%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            DT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/562 (40%), Positives = 315/562 (56%), Gaps = 78/562 (13%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1867

Query: 1264 ---------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWI 1308
                     D+ G  E           H  E +L  +L F+  + S   +   +A+  W 
Sbjct: 1868 EEDEEGKKIDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWT 1927

Query: 1309 QSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLSH 1362
            + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS 
Sbjct: 1928 EVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSD 1987

Query: 1363 NMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSFD 1415
             MW+ P   A H    KE+E + +++              +QG ++       I  VSFD
Sbjct: 1988 CMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSFD 2033

Query: 1416 KEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRW 1475
             EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RW
Sbjct: 2034 PEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRW 2092

Query: 1476 PIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGE 1535
            P+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGE
Sbjct: 2093 PVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGE 2152

Query: 1536 EPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMV 1595
            EP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ 
Sbjct: 2153 EPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLA 2210

Query: 1596 ESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK-------- 1647
            E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +        
Sbjct: 2211 EATIQLIRILHRTDRWTYCINKKMIERLHKIKICIKESGQKLKKSRSVQSREENEMREEK 2270

Query: 1648 -------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGT 1694
                         G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  T
Sbjct: 2271 ENKEEEKGKHSRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHAT 2330

Query: 1695 LLGTLKEGIAKVKDLNFDEIDL 1716
            LLG +KEG    K + +DE ++
Sbjct: 2331 LLGVVKEGSTSAK-VQWDEAEI 2351



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3994 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4052

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4053 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4112

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4113 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4171

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4172 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4231

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4232 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4291

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4292 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4350

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4351 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4386


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 382/1022 (37%), Positives = 550/1022 (53%), Gaps = 129/1022 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIYTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS-----ACLVYLIL 143
             L S + L   L     AL  L E +  A        T  +  L++S     +   ++ +
Sbjct: 245  RLASELLL--GLAAQRGALRYLLEWIEMALGASAVVNTMEKTKLLQSPEGMISFDCFMSI 302

Query: 144  VTLADDNIKPLGDRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
            +T    ++    DR      T                         D   T     +   
Sbjct: 303  LTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L S  S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++ +VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP--- 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE Y  C +    IP   
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIF-------------------------YFDQNQDTNILMLEDLLKISCRKSYAYTLTHF 737
             +                          Y  Q+   +  + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDTTETASMCISYGNLSDQAYAVQSSHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV-----SPQETPVSQVVTLLQSLIITQYVVKHSEICEE------VYQHYLD 783
               + N+ K      S + +  + +  LL SL        H     E      +   +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAYCHINSVTENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTL----------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLID 875
            +   L             L    LL+      P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIIDIDKFVRDMRH 935
            +ER +ALLIG+ LG ML GPP + EE +T +WLKT L S G+E    I  +DK +  +  
Sbjct: 1141 LERTVALLIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVE--MDIPHLDKCMSSLLE 1198

Query: 936  VS 937
            V+
Sbjct: 1199 VA 1200



 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/558 (41%), Positives = 320/558 (57%), Gaps = 67/558 (12%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLL-------------- 1260
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL              
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGEG 1867

Query: 1261 ---------PPSDTQG-NLEHDVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                       +D+ G N + D        H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEVESKKADSNGDNEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSISP-SGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++ +L + 
Sbjct: 1928 KWTEVLLNIASQKCCSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVEQLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKC 1419
            LS  MW+ P   A H    KE+E + +++        G S    +  + I  VSFD EK 
Sbjct: 1988 LSDCMWESPIAQAKHAIQIKEKEREIKLQK------QGESEDEDEN-LPIQEVSFDPEKA 2040

Query: 1420 VCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRD 1479
             CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D
Sbjct: 2041 QCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHD 2099

Query: 1480 YNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHL 1539
            +NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP L
Sbjct: 2100 FNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKL 2159

Query: 1540 AFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYI 1599
            AF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I
Sbjct: 2160 AFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATI 2217

Query: 1600 SLLRQLHKIDRWKAHVNQCLLDRLSVIKE-LTAAAEEDNASAFVP--------------- 1643
             L+R LH+ DRW   +N+ +++RL+ IK  L    ++   S  V                
Sbjct: 2218 QLIRILHRTDRWTYCINKKMMERLNKIKTYLKEVGQKLKKSRSVQSREENEVREEKENKE 2277

Query: 1644 -----QADKGRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGT 1698
                  +  G   L E Q+++LC EVWP L V+GG D GLR+GG+CV K +GR  TLLG 
Sbjct: 2278 EEKSKHSRHGLAELSELQLKMLCVEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHATLLGV 2337

Query: 1699 LKEGIAKVKDLNFDEIDL 1716
            LKEG    K + +DE ++
Sbjct: 2338 LKEGSTSAK-VQWDEAEI 2354



 Score =  244 bits (624), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4002 VYLWGAGRHGQLAEAGR-NVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGSYG 4060

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4061 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4120

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4121 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 4179

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HT+ +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4180 PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL 4239

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+   I D+
Sbjct: 4240 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDI 4299

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LALS   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4300 AVGAEHTLALSSTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4358

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   DV P  +  ++E
Sbjct: 4359 AAWTAPPVPPRAPGVSVPLQLGLPDVIPPQYGALKE 4394


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 378/1011 (37%), Positives = 549/1011 (54%), Gaps = 129/1011 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADILGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C  ++ 
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNTMEKSKLLSS--QEGMISFDC--FMT 301

Query: 143  LVTLADDNIKPLGDRKSSNSNT-------------------------DIDSTSTPKLTYN 177
            ++T    ++    DR      T                         D   T     +  
Sbjct: 302  ILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQ 361

Query: 178  IGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDST 237
             GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + 
Sbjct: 362  TGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTD 421

Query: 238  GGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+S
Sbjct: 422  GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481

Query: 293  WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
            WG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD G
Sbjct: 482  WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 353  RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
            RLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +
Sbjct: 542  RLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601

Query: 413  VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTG 468
            V  PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  
Sbjct: 602  VYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEE 661

Query: 469  LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
            L++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++
Sbjct: 662  LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQ 721

Query: 529  QICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI--- 585
            QI AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   
Sbjct: 722  QISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPL 779

Query: 586  PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIE 645
            PF S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+
Sbjct: 780  PFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQ 839

Query: 646  TLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEEL 701
             ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +
Sbjct: 840  EVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHV 899

Query: 702  AHIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTH 736
            A +  +    D   L                         + E L+K   R    YT   
Sbjct: 900  ASLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQA 959

Query: 737  F---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYL 782
            F   + N+ K       S    P      + +L + L+   ++   SE    V     +L
Sbjct: 960  FGELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHL 1019

Query: 783  DIVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR 835
             ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R
Sbjct: 1020 QLLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVAR 1079

Query: 836  SMYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLI 874
             +   L   L        +LP  D L +Q L  P+ G                 S++WL+
Sbjct: 1080 PLLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLV 1139

Query: 875  DMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            D+ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1140 DLERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1775 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLLMASFGEG 1834

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        DT G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1835 EQEEGEEEEKKVDTSGETEKKDFRATLRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1894

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1895 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1954

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1955 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2000

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2001 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2059

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2060 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2119

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2120 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2177

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2178 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREESEMR 2237

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2238 EEKENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2297

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2298 HATLLGVVKEGSTSAK-VQWDEAEI 2321



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3966 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4024

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4025 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4084

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4085 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4143

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4144 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4203

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4204 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4263

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4264 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4322

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4323 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4358


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  558 bits (1438), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 373/1009 (36%), Positives = 545/1009 (54%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            DT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGMPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEEEERKVDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4297 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4391


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  558 bits (1438), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 372/1009 (36%), Positives = 545/1009 (54%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGAQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 +++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGMPLPQPAQAWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG MLLG P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLLGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1817 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEE 1876

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1877 EGEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1936

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1937 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1996

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +              + +QG ++       I  V
Sbjct: 1997 LSDCMWETPIAQAKHAIQIKEKEQEIK--------------SQKQGDLEEEDENLPIQEV 2042

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2043 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2101

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2102 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2161

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2162 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2219

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2220 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2279

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2280 EEKESKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2339

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2340 HATLLGVVKEGSTSAK-VQWDEAEI 2363



 Score =  246 bits (629), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4008 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4066

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4067 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4126

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4127 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4185

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4186 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4245

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4246 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4305

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4306 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4364

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4365 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4400


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 372/1009 (36%), Positives = 544/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMMIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  I++SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIINSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1812 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1871

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1872 EGEEGEEEEKKVDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1931

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1932 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1991

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1992 LSDCMWETPIAQAKHALQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2037

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2038 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2096

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2097 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2156

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2157 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPVCSPVAA 2214

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2215 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2274

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2275 EEKESKEEEKGKHSRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2334

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2335 HATLLGVVKEGSTSAK-VQWDEAEI 2358



 Score =  247 bits (631), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3988 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4046

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4047 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4106

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4107 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4165

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4166 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4225

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4226 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4285

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4286 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4344

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4345 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4380


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 372/1009 (36%), Positives = 545/1009 (54%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGAQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 +++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGMPLPQPAQAWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG MLLG P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLLGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEE 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +              + +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIK--------------SQKQGDLEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4297 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4391


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 384/1010 (38%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  250 bits (639), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3992 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4050

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4051 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4110

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4111 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4169

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4170 PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4229

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4230 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4289

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4290 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4348

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4349 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4384


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 381/1010 (37%), Positives = 548/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKGKLLSSQEGMISFDCFMTI 302

Query: 142  ILV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNI 178
            ++                  T   D +  L +       +     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (640), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4391


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 384/1010 (38%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  250 bits (639), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4391


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  558 bits (1437), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 381/1010 (37%), Positives = 548/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKGKLLSSQEGMISFDCFMTI 302

Query: 142  ILV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNI 178
            ++                  T   D +  L +       +     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLVRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (640), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4391


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 384/1010 (38%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1745 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1804

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1805 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1864

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1865 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1924

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1925 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 1970

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 1971 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2029

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2030 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2089

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2090 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2147

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2148 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2207

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2208 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2267

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2268 HATLLGVVKEGSTSAK-VQWDEAEI 2291



 Score =  250 bits (638), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3936 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 3994

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 3995 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4054

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4055 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4113

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4114 PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4173

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4174 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4233

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4234 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4292

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4293 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4328


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 373/1009 (36%), Positives = 544/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNTMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 315/564 (55%), Gaps = 80/564 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLL-------------- 1260
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL              
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLLIASFGEG 1867

Query: 1261 --------PPSDTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQP 1306
                      +D+ G  E           H  E +L  +L F+  + S   +   +A+  
Sbjct: 1868 EEDGEEEMKKADSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPK 1927

Query: 1307 WIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQL 1360
            W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + L
Sbjct: 1928 WTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLL 1987

Query: 1361 SHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVS 1413
            S  MW+ P   A H    KE+E + +++              +QG ++       I  VS
Sbjct: 1988 SDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVS 2033

Query: 1414 FDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVT 1473
            FD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+
Sbjct: 2034 FDPEKAQCCLVE-SGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVS 2092

Query: 1474 RWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKN 1533
            RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKN
Sbjct: 2093 RWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKN 2152

Query: 1534 GEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPIL 1593
            GEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  +
Sbjct: 2153 GEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVATV 2210

Query: 1594 MVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------ 1647
            + E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +      
Sbjct: 2211 LAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMRE 2270

Query: 1648 ---------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRV 1692
                           G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR 
Sbjct: 2271 ERESKEEEKGKHNRHGLADLSEPQLRTLCLEVWPVLAVIGGVDAGLRVGGRCVHKQTGRH 2330

Query: 1693 GTLLGTLKEGIAKVKDLNFDEIDL 1716
             TLLG +KEG    K + +DE ++
Sbjct: 2331 ATLLGVVKEGSTSAK-VQWDEAEI 2353



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3998 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4057 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4116

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4117 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4235

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+   I DV
Sbjct: 4236 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 4295

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4296 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4354

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4355 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4390


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 384/1010 (38%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLTESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1007), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/564 (40%), Positives = 315/564 (55%), Gaps = 80/564 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 -----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQP 1306
                       ++ G  E           H  E +L  +L F+  + S   +   +A+  
Sbjct: 1868 EQEEGEEEKKVESSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPK 1927

Query: 1307 WIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQL 1360
            W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + L
Sbjct: 1928 WTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSLL 1987

Query: 1361 SHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVS 1413
            S  MW+ P   A H    KE+E + +++              +QG ++       I  VS
Sbjct: 1988 SDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVS 2033

Query: 1414 FDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVT 1473
            FD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+
Sbjct: 2034 FDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVS 2092

Query: 1474 RWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKN 1533
            RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKN
Sbjct: 2093 RWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKN 2152

Query: 1534 GEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPIL 1593
            GEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  +
Sbjct: 2153 GEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAV 2210

Query: 1594 MVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------ 1647
            + E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +      
Sbjct: 2211 LAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMRE 2270

Query: 1648 ---------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRV 1692
                           G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR 
Sbjct: 2271 EKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRH 2330

Query: 1693 GTLLGTLKEGIAKVKDLNFDEIDL 1716
             TLLG +KEG    K + +DE ++
Sbjct: 2331 ATLLGVVKEGSTSAK-VQWDEAEI 2353



 Score =  251 bits (640), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3998 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4057 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4116

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4117 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4235

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+   I DV
Sbjct: 4236 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 4295

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4296 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4354

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4355 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4390


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 384/1010 (38%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 315/564 (55%), Gaps = 80/564 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 -----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQP 1306
                       D+ G  E           H  E +L  +L F+  + S   +   +A+  
Sbjct: 1868 EQEEGEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPK 1927

Query: 1307 WIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQL 1360
            W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + L
Sbjct: 1928 WTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSLL 1987

Query: 1361 SHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVS 1413
            S  MW+ P   A H    KE+E + +++              +QG ++       I  VS
Sbjct: 1988 SDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVS 2033

Query: 1414 FDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVT 1473
            FD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+
Sbjct: 2034 FDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVS 2092

Query: 1474 RWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKN 1533
            RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKN
Sbjct: 2093 RWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKN 2152

Query: 1534 GEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPIL 1593
            GEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  +
Sbjct: 2153 GEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAV 2210

Query: 1594 MVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------ 1647
            + E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +      
Sbjct: 2211 LAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMRE 2270

Query: 1648 ---------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRV 1692
                           G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR 
Sbjct: 2271 EKESKEEEKGKHTRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRH 2330

Query: 1693 GTLLGTLKEGIAKVKDLNFDEIDL 1716
             TLLG +KEG    K + +DE ++
Sbjct: 2331 ATLLGVVKEGSTSAK-VQWDEAEI 2353



 Score =  245 bits (626), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 217/396 (54%), Gaps = 23/396 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3998 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4057 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4116

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP        G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4117 NSDRQRRPX------QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4170

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4171 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4230

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4231 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4290

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4291 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4349

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4350 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4385


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 384/1010 (38%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCNGYGNLSDPPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLTESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTVALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/564 (40%), Positives = 315/564 (55%), Gaps = 80/564 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 -----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQP 1306
                       D+ G  E           H  E +L  +L F+  + S   +   +A+  
Sbjct: 1868 EQEEGEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPK 1927

Query: 1307 WIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQL 1360
            W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + L
Sbjct: 1928 WTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSLL 1987

Query: 1361 SHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVS 1413
            S  MW+ P   A H    KE+E + +++              +QG ++       I  VS
Sbjct: 1988 SDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVS 2033

Query: 1414 FDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVT 1473
            FD EK  CC VE  GQ L HG G +GYG+A+ GIT GCYQWKF IV E++GNEGTC+GV+
Sbjct: 2034 FDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGITSGCYQWKFYIVKENRGNEGTCVGVS 2092

Query: 1474 RWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKN 1533
            RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKN
Sbjct: 2093 RWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKN 2152

Query: 1534 GEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPIL 1593
            GEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  +
Sbjct: 2153 GEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAV 2210

Query: 1594 MVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------ 1647
            + E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +      
Sbjct: 2211 LAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMRE 2270

Query: 1648 ---------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRV 1692
                           G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR 
Sbjct: 2271 EKESKEEEKGKHTRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRH 2330

Query: 1693 GTLLGTLKEGIAKVKDLNFDEIDL 1716
             TLLG +KEG    K + +DE ++
Sbjct: 2331 ATLLGVVKEGSTSAK-VQWDEAEI 2353



 Score =  250 bits (639), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 155/397 (39%), Positives = 220/397 (55%), Gaps = 18/397 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3998 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4057 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4116

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4117 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4235

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4236 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4295

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4296 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4354

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIREF 571
             A+T PP          PL +   D  P  +  +RE 
Sbjct: 4355 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALREI 4391


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (642), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3984 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4042

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4043 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4102

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4103 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4161

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4162 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4221

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4222 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4281

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4282 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4340

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4341 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4376


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   +RQI AG   S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNIRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4391


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3962 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4020

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4021 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4080

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4081 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4139

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4140 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4199

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4200 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4259

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4260 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4318

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4319 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4354


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 381/1010 (37%), Positives = 548/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKGKLLSSQEGMISFDCFMTI 302

Query: 142  ILV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNI 178
            ++                  T   D +  L +       +     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 377/1023 (36%), Positives = 549/1023 (53%), Gaps = 135/1023 (13%)

Query: 33   VATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD- 91
             A   L N V+ T++ +V +LPPLSL+NE+++ ++G++ L QV+TFL+  VT  +  AD 
Sbjct: 194  AANMNLCNDVIHTAIEVVNSLPPLSLANESKIPAMGLDCLAQVTTFLK-GVTMPNSGADV 252

Query: 92   -------------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACL 138
                          + + SLR  +   +     +A ++ + E        Q  LI   C 
Sbjct: 253  LGRRLASELLLGLASQRGSLRYLLEWIEMALAASAVVSTMAE---SKAWNQEGLIGYDCF 309

Query: 139  VYLI------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLT 175
            + ++      L + AD +      R S                     +D   T     +
Sbjct: 310  MSILMQMRRSLGSAADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCVSPDS 369

Query: 176  YNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLD 235
               G+  +     +VY WG N  HQ+++  + K  +P+L +  ++ + IEAGQ+CTF++ 
Sbjct: 370  IQTGEAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAATFADAQTIEAGQYCTFVIS 429

Query: 236  STGGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEV 290
            S G +   GKG    LGL ++  Q   K++  E   AI  +S SK S+ H L  T+EGEV
Sbjct: 430  SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEV 489

Query: 291  YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
            +SWG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAV+EDG LYTWGEGD
Sbjct: 490  FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGD 549

Query: 351  HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
             GRLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT
Sbjct: 550  FGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 609

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLV 466
             +V  PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+
Sbjct: 610  NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLI 669

Query: 467  TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
              L++ ++VD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KVVGL+ V 
Sbjct: 670  EELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVA 729

Query: 527  VRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETG-DYI 585
            ++QI AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y     +    +
Sbjct: 730  IQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERYCDGINSDVPPL 789

Query: 586  PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIE 645
            PF S   H  F+ L LRLLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+
Sbjct: 790  PFPSSREHHHFLKLCLRLLSNHLALALAGGVATSILGRQARPLRNLLFRLMDSSVPDEIQ 849

Query: 646  TLLTD----------CLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVI 691
               TD           L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I
Sbjct: 850  EARTDPPSIAAVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDII 909

Query: 692  TSSLHKNEELAHIFYFDQNQDTNIL-------------------------MLEDLLKISC 726
             +SL  +  +A +  +    D   L                         + E L+K   
Sbjct: 910  LTSLQDHTHVASLLGYSSPTDGPELLPSGPGFMASPEPTYGIMSDHPDTHLAEILMKTLL 969

Query: 727  RKSYAYTLTHF---QSNACKV--------SPQETPVSQVVTLLQSLIITQYVV---KHSE 772
            R    YT   F   + N+ K+        S Q   + Q++  LQ  ++    +     + 
Sbjct: 970  RNLGFYTDQAFGELEKNSDKLQRGTSSSDSSQPAHLHQLLCSLQKQLLAYCHINSVSENS 1029

Query: 773  ICEEVYQHYLDIVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHS 828
                +   +L ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+S
Sbjct: 1030 SSVALLHKHLQLLLPHATDIFSRSATLIKESSWNGSIQEKLQDVIYVSAAGSMLCQIVNS 1089

Query: 829  LL---INIHRSMYPTL-----------RYFLAILPLLDSLNQLLPMQG--NYTETN---- 868
            LL   +++ R +   L           R   A  PL D   Q  P+ G  ++ E      
Sbjct: 1090 LLLLPVSVARPLLSHLLDLLPPLDRLNRLLPAASPLEDQELQ-WPLHGASDFAEPASGMS 1148

Query: 869  ------SFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTA 922
                  S++WL+D+ER +ALL+G+ LG ML G P + EE +T +WLKT L S GLE  + 
Sbjct: 1149 LPQPALSWVWLVDLERTVALLVGRCLGGMLQGAPTSLEEQDTAYWLKTPLFSNGLEMESP 1208

Query: 923  IID 925
             +D
Sbjct: 1209 RLD 1211



 Score =  370 bits (949), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 227/619 (36%), Positives = 320/619 (51%), Gaps = 130/619 (21%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI+   + + L+  V   L   L   L+ LL  +           
Sbjct: 1881 STALKVASTRLLQILAISTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAAVNLLSSGSDR 1940

Query: 1264 -----DTQGNLEH-DVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLL 1312
                 +  G+ E  D+        T E +L  +L F+  + S   +   +A+  W + LL
Sbjct: 1941 DSKKQEEGGDTEKKDIRALIRKQRTAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLL 2000

Query: 1313 YLLS-------------ISP--------------SGLCKLNLLRARLLTLNLLTAILPHA 1345
             + +              +P              +G+  +  LR RLL L++L A+LP  
Sbjct: 2001 NIAAQKCCSGRGQTASDCTPDKPSWDSKPLWEPFTGVPLVGNLRTRLLALHVLEAVLPAC 2060

Query: 1346 Q-----QGELGIITELLTQLSHNMWKVPRTVAHHNALKKE--EELDKQIEHLYCPPPSGT 1398
            +     +    ++  L + LS  MW+ P   A H+   KE  +EL  Q+    C      
Sbjct: 2061 ETSMDEEQVTRVVERLFSLLSDCMWEAPIAQAKHSMQVKERVQELRLQV----C-----N 2111

Query: 1399 SNASRQGYVD---------------------------IDSVSFDKEKCVCCTVECGGQSL 1431
            S  +RQ ++                            +  VSFD EK  CC VE  GQ L
Sbjct: 2112 STLARQKHLGKILLVLFLFDGWFILQGEAEEEDENLPVQEVSFDPEKAQCCVVE-NGQGL 2170

Query: 1432 IHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLY 1491
             HG G +GYG+A+ GI+ GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRTT DMWLY
Sbjct: 2171 THGSGGKGYGLASTGISSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLY 2230

Query: 1492 RAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLY 1551
            RAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+D +  LY
Sbjct: 2231 RAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDATE-LY 2289

Query: 1552 PIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRW 1611
            P V+FYS+N  GEKVKI DM +  TPRDLL G+P C+P+  ++ E+   L+R LH+ D W
Sbjct: 2290 PCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPVCSPMATVLAEATTQLIRILHRTDHW 2348

Query: 1612 KAHVNQCLLDRLSVIK---------------------------ELTAAAEEDNASAFVPQ 1644
               +N+ +++RL  IK                           E   A  E   +   P+
Sbjct: 2349 THRINKTMIERLHKIKACFRDSAGSSGSGGGQRLKKSRSVQSREEHDAQRESPEAPARPE 2408

Query: 1645 ADKGRL-------VLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLG 1697
             D+ R         L E  +  LC EVWP L ++GG D GLR+GG+CV K +GR  TLLG
Sbjct: 2409 EDRARHGRQHGLGELSEHSLRTLCTEVWPVLAIIGGADAGLRVGGRCVHKQTGRHATLLG 2468

Query: 1698 TLKEGIAKVKDLNFDEIDL 1716
             +KEG    K + +DE ++
Sbjct: 2469 VVKEGSTSAK-VQWDEAEI 2486


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3992 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4050

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4051 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4110

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4111 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4169

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4170 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4229

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4230 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4289

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4290 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4348

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4349 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4384


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3991 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4049

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4050 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4109

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4110 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4168

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4169 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4228

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4229 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4288

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4289 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4347

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4348 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4383


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4391


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 383/1010 (37%), Positives = 549/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   + L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGQKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E   +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQQIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  251 bits (640), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   +RQI AG   S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNIRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 4391


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 373/1009 (36%), Positives = 543/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P LV  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLVEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSAPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E     +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDIPQLD 1190



 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEEEEKKVDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3998 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4057 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4116

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4117 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4235

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4236 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4295

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4296 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4354

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4355 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4390


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  554 bits (1428), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 371/1009 (36%), Positives = 543/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNTMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRCSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  +     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPLVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCASYGSLSDQPYGTQGCYPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E     +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDIPQLD 1190



 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1806 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEV 1865

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1866 EGEEGEEEERKVDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1925

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1926 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1985

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E D +++              +QG ++       I  V
Sbjct: 1986 LSDCMWETPIAQAKHAIQIKEKEQDIKLQ--------------KQGELEEEDENLPIQEV 2031

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2032 SFDPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2090

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2091 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2150

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2151 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2208

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2209 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREESEVK 2268

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV + +GR
Sbjct: 2269 EEKESKEEEKGKHSRHGLADLSEPQLRTLCTEVWPVLAVIGGVDAGLRVGGRCVHRQTGR 2328

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2329 HATLLGVVKEGSTSAK-VQWDEAEI 2352



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3996 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4054

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4055 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4114

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4115 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4173

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4174 PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4233

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4234 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4293

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4294 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4352

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4353 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4388


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  554 bits (1427), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 372/1009 (36%), Positives = 542/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T+  +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTATEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADILGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E     +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDIPQLD 1190



 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1867

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 1868 EEDEEEEKKLDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 1927

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 1928 TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 1987

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 1988 DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 2033

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 2034 DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 2092

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 2093 WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 2152

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 2153 EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 2210

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 2211 AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREE 2270

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 2271 KESKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 2330

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 2331 TLLGVVKEGSTSAK-VQWDEAEI 2352



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3997 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4056 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4115

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4116 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4234

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4235 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4294

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 4295 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 4353

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4354 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4389


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 378/1010 (37%), Positives = 546/1010 (54%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   LP    +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLPAQRGSLRYLLEWIEMALGASPVVYTMEKNKLLSSQEGMISFDCFMAI 302

Query: 142  I------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLTYNI 178
            +      L + AD +      R S                     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVD+SIGDSH L+LS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP--- 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    IP   
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYF--------------------DQNQDTNIL-----MLEDLLKISCRKSYAYTLTHF 737
             +  +                    DQ   + I      + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSTVCMGYGNLSDQPYGSQICHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   +E    V     +L 
Sbjct: 961  GELEKNSDKYLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNVTENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTL----------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLID 875
            +   L             L    LL+      P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 384/1011 (37%), Positives = 549/1011 (54%), Gaps = 128/1011 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
             +  +    D   L                         + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
               + N+ K       S    P      + +L + L+   ++   SE    V     +L 
Sbjct: 961  GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080

Query: 837  MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
            +   L   L        +LP  D L +Q L  P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAH-EETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P +  EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPCEEQDTAYWMKTPLFSDGVEMDTPQLD 1191



 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/566 (40%), Positives = 315/566 (55%), Gaps = 82/566 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1810 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1869

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1870 EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1929

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 1930 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1989

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1990 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2035

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWK-FLIVNEHKGNEGTCIG 1471
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWK F IV E++GNEGTC+G
Sbjct: 2036 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKYFYIVKENRGNEGTCVG 2094

Query: 1472 VTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFG 1531
            V+RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFG
Sbjct: 2095 VSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFG 2154

Query: 1532 KNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVP 1591
            KNGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV 
Sbjct: 2155 KNGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVA 2212

Query: 1592 ILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK---- 1647
             ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +    
Sbjct: 2213 AVLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEM 2272

Query: 1648 -----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSG 1690
                             G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +G
Sbjct: 2273 REEKESKEEEKGKHTRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTG 2332

Query: 1691 RVGTLLGTLKEGIAKVKDLNFDEIDL 1716
            R  TLLG +KEG    K + +DE ++
Sbjct: 2333 RHATLLGVVKEGSTSAK-VQWDEAEI 2357



 Score =  250 bits (639), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4002 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4060

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4061 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4120

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4121 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4179

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 4180 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4239

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4240 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDV 4299

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 4300 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4358

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4359 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4394


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 377/1010 (37%), Positives = 544/1010 (53%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVYTMEKNKLLSSQEGMISFDCFMAI 302

Query: 142  I------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLTYNI 178
            +      L + AD +      R S                     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVD+SIGDSH L+LS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP--- 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    IP   
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIF-------------------------YFDQNQDTNILMLEDLLKISCRKSYAYTLTHF 737
             +                          Y  Q    +  + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSTVCMGYGNLSDQPYGPQTCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV-----SPQETPVSQVVTLLQSLIITQYVVKH-SEICEE-----VYQHYLD 783
               + N+ K      S + +  + +  LL SL        H + I E      +   +L 
Sbjct: 961  GELEKNSDKYLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNITENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  I++SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIINSLLLLPVSVARP 1080

Query: 837  MYPTL----------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLID 875
            +   L             L    LL+      P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEG 1867

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 1868 EEGEEEDKKVDSSGEAEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 1927

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 1928 TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 1987

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 1988 DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 2033

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 2034 DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 2092

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 2093 WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 2152

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 2153 EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 2210

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 2211 AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIRESGQKLKKSRSVQSREENEMREE 2270

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 2271 KENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 2330

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 2331 TLLGVVKEGSTSAK-VQWDEAEI 2352



 Score =  246 bits (628), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3997 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4056 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4115

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4116 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4234

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4235 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4294

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4295 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4353

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4354 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4389


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  551 bits (1421), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 377/1010 (37%), Positives = 544/1010 (53%), Gaps = 127/1010 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL + VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFL-KGVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
             L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVYTMEKNKLLSSQEGMISFDCFMAI 302

Query: 142  I------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLTYNI 178
            +      L + AD +      R S                     +D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVD+SIGDSH L+LS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP--- 586
            I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    IP   
Sbjct: 723  ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587  FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
            F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781  FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647  LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
            ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841  VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703  HIF-------------------------YFDQNQDTNILMLEDLLKISCRKSYAYTLTHF 737
             +                          Y  Q    +  + E L+K   R    YT   F
Sbjct: 901  SLLGYSSPSDAADLSTVCMGYGNLSDQPYGPQTCHPDTHLAEILMKTLLRNLGFYTDQAF 960

Query: 738  ---QSNACKV-----SPQETPVSQVVTLLQSLIITQYVVKH-SEICEE-----VYQHYLD 783
               + N+ K      S + +  + +  LL SL        H + I E      +   +L 
Sbjct: 961  GELEKNSDKYLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNITENSSSVALLHKHLQ 1020

Query: 784  IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
            ++ PH  DI  RS   + +    G   E L +++Y S AG +L  I++SLL   +++ R 
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIINSLLLLPVSVARP 1080

Query: 837  MYPTL----------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLID 875
            +   L             L    LL+      P+ G                 S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVD 1140

Query: 876  MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            +ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEG 1867

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 1868 EEGEEEDKKVDSSGEAEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 1927

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 1928 TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 1987

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 1988 DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 2033

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 2034 DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 2092

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 2093 WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 2152

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 2153 EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 2210

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 2211 AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIRESGQKLKKSRSVQSREENEMREE 2270

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 2271 KENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 2330

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 2331 TLLGVVKEGSTSAK-VQWDEAEI 2352



 Score =  246 bits (628), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3997 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4056 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4115

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4116 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4234

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4235 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4294

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4295 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4353

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4354 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4389


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  551 bits (1419), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 358/936 (38%), Positives = 524/936 (55%), Gaps = 86/936 (9%)

Query: 36   STLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQT-VTSTSPKADKTV 94
            S L N VL T+ S++ +LPPLSL+NE ++ S+G++ L QV+ FL++T V S +  AD T 
Sbjct: 195  SVLCNDVLATACSVLASLPPLSLANENKIPSVGLDCLAQVAEFLKKTSVISGTGVADPTG 254

Query: 95   QSSL----------RSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILV 144
            +             R  +          +  ++  +VL+        L ++A  ++  + 
Sbjct: 255  RRLALELLLGLAMHRGSLKFLLEWVEGFSGESINTQVLKKDADGLCQLSQAALCLFEEIC 314

Query: 145  TLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDE 204
             LA   +       SS+++T    T    +T              VY WG N  HQ+ + 
Sbjct: 315  NLASYCLC------SSSADTACPGTDGDAVT--------------VYVWGSNSSHQLAEG 354

Query: 205  VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKR 261
               K   P+L    S+ + IEAGQ+CTF + + G +   GKG    LGL ++  Q +PK+
Sbjct: 355  TLEKILLPKLTQGFSDAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKK 414

Query: 262  VPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
            + LE    I  +  SK S+ H L +T +GEV+SWG GE+GKLGHGN+ +Q+ PK++ G L
Sbjct: 415  LVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIVQGPL 474

Query: 320  YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSC 379
            + K V   SAG+ HSAAVT DG LYTWGEGD GRLGH D +SR+TPTLV ++S VG V+C
Sbjct: 475  FSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQVAC 534

Query: 380  GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            G SHT+ ++QDG T+WS G G+ GKLGH DT +V  PKVIEAL  F +RKVCAG+  S+A
Sbjct: 535  GSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLA 594

Query: 440  LTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
            LT  G VF WG    LG  SS  +   P  V  LS  +I+D+S GDSH LALS  NEVYA
Sbjct: 595  LTSAGQVFAWGCGSCLGCGSSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYA 654

Query: 496  WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
            WG+NTMGQCGQ + S P+ +P KV+GLE V ++QI AG+  S+A+T  P++  L +   P
Sbjct: 655  WGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRP 714

Query: 556  LCVDVRPHTFTLIREFLEQYSACFETGD-YIPFCSKVTHAQFILLLLRLLSSHLYLALIG 614
             CVD+   TFT +  FL+ Y    E      PF SK  H QFILL ++LLS HL LA  G
Sbjct: 715  FCVDLEESTFTYLCNFLKCYCDGLEDDTPPTPFLSKRDHHQFILLCMKLLSVHLSLAHAG 774

Query: 615  ARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL 674
               + VLG++   LR++LF+L+D      I+  + + L+IGASLLLPP+ E+ +LL +LL
Sbjct: 775  GTGAMVLGSQGRPLRNLLFRLIDSNMPGSIQQAVLNTLSIGASLLLPPLRERTELLLSLL 834

Query: 675  SQD----HPLSNGQRMLLGVITSSLHKNEELAHIFYFDQNQDTNILMLEDLLKISCRKSY 730
             +     + LS GQR+ L ++ SSL            DQ+   ++L   +  +     + 
Sbjct: 835  PRGPQSLNALSKGQRLQLEMVLSSLQ-----------DQSYIASLLGYSNFGEFPALGTA 883

Query: 731  AYTLTHFQSNACKVSPQETPVSQVVTLLQSLIIT-QYVVKHSEICEEVYQHYLDIVFPHV 789
              + T  Q  +   S    P+     LL++L+++  +    S +   + Q +L ++ P  
Sbjct: 884  LTSTTSAQIPSSSTSEVYDPLRLAEVLLRTLVLSIGFYTGDSNV--SLLQDHLYLLLPCA 941

Query: 790  IDILERSIAWVNQGK-DIEVLNEL---LYNSLAGKILFSIVHSLLINIHRSMYPTLRYFL 845
             + L R+   + +   D +++ EL   LYNS+AG +L  +++SLL+    ++ P L + L
Sbjct: 942  SETLRRATKLLGESSLDKQIIRELHIVLYNSVAGSMLCQVMYSLLLLPLSTIQPLLSHLL 1001

Query: 846  AILPLLDSLNQLLP-----------------------MQGNYTETNSFLWLIDMERALAL 882
            A+L  +++ N+LLP                             E N+++WL+D+ER+LAL
Sbjct: 1002 ALLEHINNFNRLLPDTNLLEVEELATEAQKSSSDTTEESNGQREENTWVWLLDLERSLAL 1061

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLE 918
             +G+ LG ML GPP + +E  +  WL   L   GLE
Sbjct: 1062 AVGRCLGGMLQGPPISFQEKTSEFWLSNILFRNGLE 1097



 Score =  331 bits (848), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 191/466 (40%), Positives = 263/466 (56%), Gaps = 49/466 (10%)

Query: 1279 ERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLLSISPS-GLCKLNLLRARLLTLNL 1337
            E  L  +L F+  + S+  +  L     WI  L+ ++S   S G    + LR +LL  ++
Sbjct: 1599 ESQLGDFLVFLRRVLSLRVLKNLSTFVKWIDPLMTIISHKCSLGSPCFHNLRTKLLAFHV 1658

Query: 1338 LTAILPHAQQGEL--GIITELLTQLSHNMWKVPRTVAHHNAL-KKEEELDKQIEHLYCPP 1394
            L  +LP +        I+ +L   +S  MWK P T  ++  + +K + +    ++  C P
Sbjct: 1659 LERVLPASSDPSQIQKIVVQLFQLVSVYMWKEPLTERNYEEMPEKHKRVMSHFDYEECIP 1718

Query: 1395 PSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQW 1454
                          I + SFD  K VCC++E  G  L HG G +GYG+    IT GC+ W
Sbjct: 1719 --------------IGAFSFDPHKIVCCSLE-SGNILSHGAGGKGYGLTTTAITSGCFIW 1763

Query: 1455 KFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQG 1514
            KF +  E++GNEGTCIGV+RWP+RD+NH TT DMWLYRAYSGN+YH GE    LPSFTQG
Sbjct: 1764 KFSVTKENRGNEGTCIGVSRWPVRDHNHHTTTDMWLYRAYSGNLYHGGELIRTLPSFTQG 1823

Query: 1515 DYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVC 1574
            D IT +LDM+A T+ F KN +EP LAF+ +  ++ LYP VLFYS+N  GEKV + D+ + 
Sbjct: 1824 DTITCILDMEAHTIFFAKNDKEPKLAFEGV-IASELYPCVLFYSSNP-GEKVALHDLQMR 1881

Query: 1575 ETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAE 1634
              P +LL GEP C+P  +++VES I LLR+LH+ D+W   +NQ +  +L +I  L    +
Sbjct: 1882 GMPSNLLPGEPLCSPRSMVLVESTIQLLRRLHRCDQWAPLINQYIHSQLELIGPLL---K 1938

Query: 1635 EDNASAFVP-------------------QADKGRLV-----LEEAQMELLCREVWPALVV 1670
            ED+ S   P                     DKG L      L +A++  LC EVWP L +
Sbjct: 1939 EDDLSRSSPVVSPTHFEKDEREREKNTSDTDKGELYLHRRSLSDAKLAALCSEVWPVLAL 1998

Query: 1671 MGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDL 1716
            +GG D GLR GG C   PSGR   LLG LKEG +  K L ++E DL
Sbjct: 1999 IGGVDTGLRAGGLCQHTPSGRRAVLLGVLKEGSSMAK-LQWEETDL 2043



 Score =  233 bits (594), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 148/378 (39%), Positives = 206/378 (54%), Gaps = 17/378 (4%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
              S VY WG   + Q L       + P L    S  + +  GQ C+FL+ S G ++  G+
Sbjct: 3679 GKSDVYLWGNGRYGQ-LAGTGTNLTLPTLAPCLSQTQQVVCGQNCSFLIQSNGAVMAVGE 3737

Query: 246  GW---LGLANTTIQPLPKRV-PLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGK 300
            G    LG  N+    +P  +   +  +V+  V+ C S+ H + +T  GEV+SWG G+ GK
Sbjct: 3738 GQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGK 3797

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN   QRRPK I   L G+ V Q++ G  HSA VT DG L+T+G G+ GRLG     
Sbjct: 3798 LGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTS 3856

Query: 361  SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            ++  P  V  L    VG VSCG +HTLVLS DG  VW+ G G+ GKLG   +     P+ 
Sbjct: 3857 NKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQK 3916

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQ 473
            +E L    ++KVC G  FSV L  DG V+ +G    +GL  S +   + P +V  L    
Sbjct: 3917 VEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLF 3976

Query: 474  IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            I D+++G  HVLALS   ++YAWG N+ GQ G  +  N V +P+ +  L+   ++QI AG
Sbjct: 3977 IEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGH-CNLVKEPTLITALQGKNIKQISAG 4035

Query: 534  SLFSIAYTVPPS--NSAL 549
               S A+T P +  NSAL
Sbjct: 4036 RCHSSAWTAPSTSKNSAL 4053


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 369/1009 (36%), Positives = 542/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRTQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P++    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKV+EAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDS  LAL   NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDAADLSSVCTGYGNLADQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGMPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG MLLG P + EE +T +W+KT L S G+E     +D
Sbjct: 1142 ERTIALLIGRCLGGMLLGSPVSPEEQDTAYWMKTPLFSDGVEMDIPQLD 1190



 Score =  392 bits (1007), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 314/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEG 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +              + +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIK--------------SQKQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  246 bits (628), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4236

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4296

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4297 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4355

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4391


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  548 bits (1412), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 371/1009 (36%), Positives = 544/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S++LT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q+
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQV 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF- 737
            +  +    D   L                         + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPPDAADLSSVCTGYGTLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHR-- 835
            + PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R  
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 836  --------SMYPTLRYFLAILPLLDSLNQLLPMQGN-----------YTETNSFLWLIDM 876
                         L   L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1809 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLLMASFGEC 1868

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1869 EGEDGEEEEKKLDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1928

Query: 1306 PWIQSLLYLLSISPS-GLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S   S G+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1929 KWTEVLLNIASQKCSAGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1988

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1989 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2034

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2035 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2093

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2094 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2153

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2154 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2211

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2212 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKMCIKESGQKLKKSHSVQSREENEMR 2271

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV + +GR
Sbjct: 2272 EEKESKEEEKSKHNRHGLTDLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHRQTGR 2331

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2332 HATLLGVVKEGSTSAK-VQWDEAEI 2355



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/405 (38%), Positives = 220/405 (54%), Gaps = 27/405 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3985 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4043

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4044 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4103

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4104 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4162

Query: 365  PTLVTEL-----------SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            P  VT L           S + +V+CG +HTL +S DG  VW+ G G+ GKLG  ++   
Sbjct: 4163 PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4222

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTG 468
            ++P+ ++ L    ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  
Sbjct: 4223 SSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHNRPQQVPV 4282

Query: 469  LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
            L+   I DV++G  H LAL+   ++YAWGSN+ GQ G  + +N V +P+ V  L+   VR
Sbjct: 4283 LAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVR 4341

Query: 529  QICAGSLFSIAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
            QI AG   S A+T PP          PL +   D  P  +  +RE
Sbjct: 4342 QISAGRCHSAAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4386



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 31/299 (10%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            ++  I+S + S+  + H+     + +VY WG G HG+L        R   +        +
Sbjct: 3962 MDEQIMSWATSRPEDWHL---GGKCDVYLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ 4014

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSC 379
              QV  G + +  +  +G +   GEG +GRLG G+    H  T+++ L          SC
Sbjct: 4015 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 4074

Query: 380  G-ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
            G + H++ L++ G  V+S G G+ GKLGH ++ +   P+ IEAL+   V ++  G   S 
Sbjct: 4075 GSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA 4133

Query: 439  ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ---------IVDVSIGDSH 483
             +T DG +F +G      LGL ++S +   P  VT L  +Q         I  V+ G +H
Sbjct: 4134 VVTSDGKLFTFGNGDYGRLGLGNTS-NKKLPERVTALEGYQIGQARNKSIICSVACGLNH 4192

Query: 484  VLALSQYNE-VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             LA+S     V+A+G    G+ G  N S     P KV  L  + ++++  G+ FS+A T
Sbjct: 4193 TLAVSADGSMVWAFGDGDYGKLGLGN-STAKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  548 bits (1411), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 365/989 (36%), Positives = 534/989 (53%), Gaps = 101/989 (10%)

Query: 26   IILRSSSVATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTS 85
            ++ +S +     L N+VL T+ S++  LPPLSL+NE+++  LG+E+L QV  FL+  V+ 
Sbjct: 169  LLRQSWNSGQGVLCNEVLQTASSVLTALPPLSLANESKMPELGLETLEQVMEFLKSVVSR 228

Query: 86   TSPKADKTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVT 145
             S   D   Q  L S + L  S+  +  +L  L + +  A    V      C V +  + 
Sbjct: 229  QSAADDTGRQ--LASELLLRLSV--HRGSLQCLLDWVGMAVSGVVGTGEEGCGVAVKCLQ 284

Query: 146  LADDNIKPLGDRKSSNSNT----------DIDSTSTP--------------------KLT 175
               D +     +K SN+              D T  P                    K T
Sbjct: 285  DIQDEMLKSATQKGSNAEVVEPTIVFEPLPSDVTHLPLHQSALCLLSQVSKLADQYAKCT 344

Query: 176  YNIGDT-DIS------VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQ 228
               G T ++S       ++ +VY WG N  HQ+ +    K   P+L +   + + IEAGQ
Sbjct: 345  VKSGITGEVSFHGNSFASNEEVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQQIEAGQ 404

Query: 229  FCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPL--EAAIVSLSVSKCSEAHVLT 283
            +CTF++   G +   GKG    LGL ++T Q   KR+    E  + S+S SK S+ H L 
Sbjct: 405  YCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLA 464

Query: 284  VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
            +T +G+VYSWG G++GKLGHGN+ +Q+ PKL+ G L  K V  ++AG+ HSAAVTEDG L
Sbjct: 465  LTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGEL 524

Query: 344  YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
            YTWGEGD+GRLGHGD  SR+ P  V ++++VG V+CG +HT+ +SQDG TVWS GSG+ G
Sbjct: 525  YTWGEGDYGRLGHGDNNSRNVPVQVKDVANVGQVACGSAHTVCVSQDGQTVWSFGSGDNG 584

Query: 404  KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSIS 459
            KLGH DT +V  PKVIEAL+   +RKVC G+  S+ALT  G V+ WG    LG  S   +
Sbjct: 585  KLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDAT 644

Query: 460  FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              TP L+  L SH +VD+S+GDSH +AL+Q N VYAWG+N+MGQCGQ + + P+ +P KV
Sbjct: 645  SATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKV 704

Query: 520  VGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACF 579
            +GL+ V V QI AG+  ++A+T  P +  + S +   CVD++  TF  ++ FLE+Y    
Sbjct: 705  LGLDGVAVHQISAGTSHTVAWTALPMDRQVVSWYRAYCVDLKESTFGCLKAFLERYCIGL 764

Query: 580  ETGDYI-PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDM 638
            ++     PF SK  H +F+LL LRLLS HL LA+    SS+VLG  T +LR +LF L+D 
Sbjct: 765  DSDQPTPPFASKSEHHKFVLLCLRLLSVHLSLAVSAGASSNVLGVHTTSLRKLLFGLLDA 824

Query: 639  ETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSS 694
              S EI+  + D L+ GASLLLPP+ E++++L +LL Q       L+ G+R  LG+I SS
Sbjct: 825  SVSEEIQEAVNDALSAGASLLLPPLPERMEVLHSLLPQAPESWESLTFGERKQLGIILSS 884

Query: 695  LHKNEELAHIFYFDQNQD--------------TNILMLEDLLKIS-----CRKSYAYTLT 735
            +  +  +A +  F  +                 ++LM   L  ++     C +S   ++T
Sbjct: 885  IQDHTHVASLLGFTLSVKGASPDEVPLISTSLADVLMKTLLRNLAFHTERCLESIEKSIT 944

Query: 736  HFQSNACKVSPQETPVSQVVTLLQSLIITQYVVKHSEICE--EVYQHYLDIVFPHVIDIL 793
               S +     +E P   +  LL SL    +   H+      +V  ++L +  P   +IL
Sbjct: 945  -TSSESIPEECEEAPPLHIHDLLLSLQKHLFAYCHNATSNNGQVMDYHLSLFLPCAGEIL 1003

Query: 794  ERSIAWVNQGKDIEVLNELLYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLAILPLLDS 853
                  +     I  L ++LY+S AG +L  ++HSL +     + P L    ++LPL D 
Sbjct: 1004 GSVYRLLTNHCLICSLLDVLYDSPAGSMLSLVLHSLTLMSFEIVQPLLSVCTSLLPLFDQ 1063

Query: 854  LNQLLP----MQGNYTE--------------------TNSFLWLIDMERALALLIGKTLG 889
            LN++LP    M+    E                      S++WL+D++R  AL IG+ LG
Sbjct: 1064 LNRVLPAAAIMEAQELEWPVLGTSQKIDPATIALPQPAQSWVWLVDLQRTCALFIGRVLG 1123

Query: 890  DMLLGPPEAHEETETVHWLKTSLLSAGLE 918
             ML GPP + +E     WL   LL  GLE
Sbjct: 1124 GMLTGPPLSRDEKACEKWLNAPLLGCGLE 1152


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 372/1009 (36%), Positives = 543/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N LE+        Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSLEK--NKLLSSQEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S++LT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP---F 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    IP   F
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IF-------------------------YFDQNQDTNILMLEDLLKISCRKSYAYTLTHF- 737
            +                          Y  Q+   +  + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDVADLSSVCTGYGSLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSM 837
            + PH  DI  RS   + +    G     L +++Y S AG +L  IV+SLL   +++ R +
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGGKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 838  YPTL----------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDM 876
               L             L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEV 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEEEEKKVDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  247 bits (630), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3984 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4042

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4043 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4102

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4103 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4161

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4162 PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4221

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4222 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4281

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4282 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4340

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4341 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4376


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 372/1009 (36%), Positives = 543/1009 (53%), Gaps = 125/1009 (12%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92   ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                        + SLR  +   +     +A +N LE+        Q  +I   C + ++
Sbjct: 246  LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSLEK--NKLLSSQEGMISFDCFMTIL 303

Query: 143  LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
            +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304  MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364  DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424  VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 484  DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 544  GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 603

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
             PKVIEAL+   +RKVCAG+  S++LT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 604  KPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 663

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 664  ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 723

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP---F 587
             AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    IP   F
Sbjct: 724  SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 781

Query: 588  CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
             S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 782  PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 841

Query: 648  LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
            + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 842  VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 901

Query: 704  IF-------------------------YFDQNQDTNILMLEDLLKISCRKSYAYTLTHF- 737
            +                          Y  Q+   +  + E L+K   R    YT   F 
Sbjct: 902  LLGYSSPSDVADLSSVCTGYGSLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFG 961

Query: 738  --QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDI 784
              + N+ K       S    P      + +L + L+   ++   SE    V     +L +
Sbjct: 962  ELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQL 1021

Query: 785  VFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSM 837
            + PH  DI  RS   + +    G     L +++Y S AG +L  IV+SLL   +++ R +
Sbjct: 1022 LLPHATDIYSRSANLLKESPWNGSVGGKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPL 1081

Query: 838  YPTL----------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDM 876
               L             L    LL+      P+ G                 S++WL+D+
Sbjct: 1082 LSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVDL 1141

Query: 877  ERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1142 ERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190



 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVLLMASFGEV 1867

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1868 EGEEGEEEEKKVDSSGETEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1987

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3991 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4049

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4050 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4109

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4110 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4168

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4169 PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4228

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4229 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4288

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4289 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4347

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4348 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4383


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 337/871 (38%), Positives = 485/871 (55%), Gaps = 87/871 (9%)

Query: 164  TDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH 223
            +D   T     +   G+  +     +VY WG N  HQ+++  + K  +P+L    S+ + 
Sbjct: 348  SDYSRTCASPDSIQSGENPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQT 407

Query: 224  IEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSE 278
            IEAGQ+CTF++ + G +   GKG    LGL ++  Q   K++  E   +I  +S SK S+
Sbjct: 408  IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSD 467

Query: 279  AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
             H L  T+EGEV+SWG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVT
Sbjct: 468  GHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT 527

Query: 339  EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            EDG LYTWGEGD GRLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G
Sbjct: 528  EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 399  SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLR 454
             G+ GKLGH DT +V  PKV+EAL+    RKVCAG+  S+ALT  G V+ WG    LG  
Sbjct: 588  GGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 455  SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
            SS  +   P L+  L++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ 
Sbjct: 648  SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPIT 707

Query: 515  QPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQ 574
            +P KV GL+ V ++QI AG+  S+A+T  P +  + +   P CVD+   TF  +R FLE+
Sbjct: 708  KPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFFHLRSFLER 767

Query: 575  YSACFETGDYIP---FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHV 631
            Y  C +    IP   F S   H  F+ L L++LS+HL LAL G  ++S+LG +   LR++
Sbjct: 768  Y--CEKINSEIPPPPFPSSRDHHGFLKLCLKMLSNHLALALAGGVATSILGRQAGPLRNL 825

Query: 632  LFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRML 687
            LF+L+D     EI+ ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM 
Sbjct: 826  LFRLMDASVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQ 885

Query: 688  LGVITSSLHKNEELAHIF---------------------YFDQNQDTNILMLEDLLKISC 726
            L +I +SL  +  +A +                      Y  Q    +  + E L+K   
Sbjct: 886  LDIILTSLQDHTHVASLLGYSTPSDSSDVTSLPMTSDPSYSSQGSHPDTHLAEILMKTLL 945

Query: 727  RKSYAYTLTHF---QSNACKV--------SPQETPVSQVVTLLQSLIITQYVVKH-SEIC 774
            R    YT   F   + N+ K         + Q   + +++  LQ  ++      H SE  
Sbjct: 946  RNLGFYTDQAFGELEKNSDKFIVGASSSENSQPAHLHELLCSLQKQLLAYCHTNHISENS 1005

Query: 775  EEV--YQHYLDIVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHS 828
              V     +L ++ PH  DI  RS   + +    G   E L +++Y S AG +L  +V++
Sbjct: 1006 SSVALLHKHLQLLLPHATDIYSRSATLLEESPWNGSVGEKLRDVIYVSAAGSMLCQLVNA 1065

Query: 829  LLI---NIHRSMYPTL----------RYFLAILPLLDSLNQLLPMQGNYTETN------- 868
            LL+   ++ R +   L             L    LL+      P+ G     +       
Sbjct: 1066 LLLLPASVARPLLSYLLDLLPPLDRLNRLLPAAALLEDQELQWPLHGGPEHIDPGGVSLP 1125

Query: 869  ----SFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAII 924
                S++WL+D+ER +ALLIG+ LG ML G P + EE +T +WLKT L   G++    + 
Sbjct: 1126 APAQSWVWLVDLERTVALLIGRCLGGMLQGSPASPEEQDTNYWLKTPLFGNGID--MEVP 1183

Query: 925  DIDKFVRDMRHVSNNILMSPNYESDVNKYSV 955
             +DK +  +  VS    +S N E     Y +
Sbjct: 1184 QLDKCMSALLEVS----LSGNEEQKTFDYKL 1210



 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/550 (41%), Positives = 322/550 (58%), Gaps = 59/550 (10%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------D 1264
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +          +
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLAQAGVTLMSSCNAE 1867

Query: 1265 TQGNLEHDV--------------HNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQS 1310
             +G+ + D+                 T E +L  +L F+  + S   +   +A+  W + 
Sbjct: 1868 EEGDRKADLTGEIDRKDFRASLRKQRTAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEV 1927

Query: 1311 LLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILP----HAQQGELGIITE-LLTQLSHNM 1364
            LL + S    SGL  +  LR RLL L++L A+LP    + +  ++  + E L + LS  M
Sbjct: 1928 LLNIASQKCSSGLPLVGNLRTRLLALHVLEAVLPACEANVEDDQMAQVVERLFSLLSDCM 1987

Query: 1365 WKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTV 1424
            W  P   A H+   +E+E + ++        +G      +  + I  VSFD EK  CC V
Sbjct: 1988 WDAPIAQAKHSIQIREKEQETKLNK------TGEVEEEEED-LPIQEVSFDPEKVQCCVV 2040

Query: 1425 ECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRT 1484
            E  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRT
Sbjct: 2041 E-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRT 2099

Query: 1485 TGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDL 1544
            T DMWLYRAYSGN+YH+GEQT  LPSFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+
Sbjct: 2100 TSDMWLYRAYSGNLYHNGEQTLTLPSFTQGDFITCVLDMEARTVSFGKNGEEPKLAFEDV 2159

Query: 1545 DTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQ 1604
            D +  LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ ES + LLR 
Sbjct: 2160 D-AGELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVATVLAESSVQLLRI 2217

Query: 1605 LHKIDRWKAHVNQCLLDRLSVI------------KELTAAAEEDNASAFVPQADKGR--- 1649
            LH+ +RW   +N+ +++RL  I            K  +  + E+N +    + DKG+   
Sbjct: 2218 LHRTERWTYCINKKMIERLQKIKGCLREAGSKLKKSRSVQSREENETRDDREEDKGKHGR 2277

Query: 1650 ---LVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKV 1706
                 L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  TLLG +KEG    
Sbjct: 2278 HGLADLGEPQLRTLCVEVWPVLAVIGGVDTGLRVGGRCVHKQTGRHATLLGVVKEGSTSA 2337

Query: 1707 KDLNFDEIDL 1716
            K + +DE ++
Sbjct: 2338 K-VQWDEAEI 2346



 Score =  247 bits (631), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 165/454 (36%), Positives = 241/454 (53%), Gaps = 29/454 (6%)

Query: 137  CLVYLILVTLADDNIKPLGDRKSSNSNTDID----STSTPKLTYNIGDTDISVAHSKVYT 192
            C     L  + ++ +K + D    N+ TD      +TS P+  +  G  D       V+ 
Sbjct: 3930 CFTVPDLEPVPEEELKLVMDNSKWNNGTDEQIMSWATSKPEDWHLGGKCD-------VFL 3982

Query: 193  WGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLG 249
            WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G    LG
Sbjct: 3983 WGAGRHGQLAEAGR-NVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLG 4041

Query: 250  LANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
              N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHGN+ 
Sbjct: 4042 QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSD 4101

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
             QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  P  
Sbjct: 4102 RQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPER 4160

Query: 368  VTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
            VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L   
Sbjct: 4161 VTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGI 4220

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDVSIG 480
             ++KV  GT FSVALT DG V+ +G    +GL       H  P LV  L    I D+++G
Sbjct: 4221 GIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVG 4280

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
              H LALS   EVYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S A+
Sbjct: 4281 AEHTLALSASGEVYAWGSNSEGQLGLGH-TNHVREPTLVTALQGKNIRQISAGRCHSAAW 4339

Query: 541  TVPPSNSALSSAFTPLCV---DVRPHTFTLIREF 571
            T  P          PL +   DV P  ++ +++ 
Sbjct: 4340 TAAPVPPRAPGVAVPLQLGLPDVIPPQYSCLKDI 4373



 Score = 48.1 bits (113), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 36/44 (81%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLR 80
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV++FL+
Sbjct: 187 SLCNDVIQTAIDVVNSLPPLSLANESKIPPMGLDCLSQVTSFLK 230


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Acyrthosiphon
            pisum]
          Length = 4257

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 334/937 (35%), Positives = 520/937 (55%), Gaps = 53/937 (5%)

Query: 18   WSNEKLENIILRSSSVATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVST 77
            W N+   +I           +G +VL T+L+++R L PLSL ++ +L  LG + L  V+ 
Sbjct: 169  WENKNCNDI----------NMGLEVLNTALTLMRELSPLSLGSKAELPQLGFDCLDNVTH 218

Query: 78   FLRQTVTSTSPK----ADKTVQSSL---RSRVPLTKSLPPYNAALNLLEEVLRPATHYQV 130
            F+++ + +   +     ++  + SL     R  L   L   + ALN+    L     Y+V
Sbjct: 219  FVKECLNADFIQNMNVKEQLAELSLLLAYQRESLIYLLEWIDMALNIDNICLPFEKLYRV 278

Query: 131  DLIRSACLVYLI----LVTLADDNIKPLGDRKS--SNSNTDIDSTSTPKLTYNIGDTDIS 184
                S+ L +             N  PL D              TS  +   N    ++ 
Sbjct: 279  LEEMSSILTFAFGSEEFENYKSRNRIPLQDVALLLMKKLVSFGETSVVRTPLNQNSAELP 338

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
               S+V+ WG N  +Q  +        PRL    S+++ +EAGQ+CTF++D+ G +   G
Sbjct: 339  QPLSEVFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQQVEAGQYCTFIIDTKGCVSACG 398

Query: 245  K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            K   G LGL N++ QP+PKR+ +   I  +S SK  + H L ++  GEVYSWG G++GKL
Sbjct: 399  KNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKL 458

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            GHG+  + + PKLI G   GK +  VSAG+ HSAAVT DG LYTWGEGDHGRLGHGD   
Sbjct: 459  GHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNP 518

Query: 362  RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            R  PTLV  LSD  VG V+CG +HTL  S+DG+TVWS GSG+ GKLGH +T ++  P+ I
Sbjct: 519  RFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKI 578

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIV 475
            E LR ++++KV AG  FSVALT  G VF WG    LG  SS I+  +P +V  L    I+
Sbjct: 579  EGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEITLFSPAVVEDLMQQMII 638

Query: 476  DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            D+S+GDSH LAL++   VYAWGSN  GQCGQ + ++PV +PSKV+ LE   + QI AG+ 
Sbjct: 639  DISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSPVSRPSKVINLEGKQINQISAGTS 698

Query: 536  FSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQ 595
             S+A+T  P +   +   +P C+D+   TF  +R+F+E+Y    E+ +  P      + +
Sbjct: 699  HSVAWTTLPPDRQTNVWHSPFCIDLHESTFKWLRQFIEKYCEQIESHESTP---NDINEE 755

Query: 596  FILLLLRLLSSHLYLALI-GARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAI 654
             ++L L +L++HL+ A + G   S +LGNET+ LR +L KLVD++    +E  L DCL+ 
Sbjct: 756  MLILSLNMLNNHLFFARVSGHNFSKLLGNETSQLRTLLLKLVDLQVKEVVERSLMDCLST 815

Query: 655  GASLLLPPVVEQLDLLKTLLSQDHPLSNGQRMLLGVITSSLHKNEELAHIFYFD-----Q 709
            GASLLLPP+  +L++LK+LL+QD  L+ GQ++LL V  SSL+ N  ++ +F  +     +
Sbjct: 816  GASLLLPPLSGRLNILKSLLAQDTNLTIGQKLLLDVTVSSLNDNSHISSLFRVNSMDLYE 875

Query: 710  NQDTNILMLEDLLKISCRKSYAYTLTHFQSNACKVSPQETPVSQVVTLLQSLIITQ---Y 766
            N+ ++I   E+++K+  +     T+T  +SN      +   +  ++T L  L+++    Y
Sbjct: 876  NRYSSI---EEVMKLLLKHLTNSTVTLLESNNSPTFKKVNKLDMILTSLHKLLLSHLLAY 932

Query: 767  VVK---HSEICEEVYQHYLDIVFPHVIDILERSIAWVNQGKDIEVL--NELLYNSLAGKI 821
             +K    S  C  + + +++ +  +++   +     +N  KD   L  N +L +S+ G+ 
Sbjct: 933  NIKSNHFSNSCLSMNRLFVNHMEAYLLFANKIFTMAINSYKDEHHLFYNAVLSSSIVGET 992

Query: 822  LFSIVHSLLINIHRSMYPTLRYFLAILPLLDSLNQLLPMQGNYTETNSFLWLIDMERALA 881
            + + ++SL       + P +   +  +  L +LNQ +    +  + N  +W I++E A  
Sbjct: 993  MINTLNSLTFLQSEHIQPLITSLINTVQSLHTLNQKM-CSNDPEKMNESVWFIELESAFC 1051

Query: 882  LLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLE 918
            LLIG+ +   ++  P    E     WLK+ L S+G+E
Sbjct: 1052 LLIGQLISYGVISSPLCPSEIYNERWLKSKLFSSGIE 1088



 Score =  323 bits (829), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 195/536 (36%), Positives = 302/536 (56%), Gaps = 29/536 (5%)

Query: 1205 HVPTHPHANGNTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPP-- 1262
            HVP       + ++ +++SN+++ILA++  N      ES+R+   + +H  L+ L+    
Sbjct: 1446 HVPFMSTDRYSLVIVKMTSNILYILAVSGCNANSSF-ESIRAVFVN-VHNLLDILINSRQ 1503

Query: 1263 --------SDTQGNLEHDVHNHTEERNLAYY----LSFIYSLTSVSTVCQLLATQPWIQS 1310
                    S+   N+  +  N  +   +  Y    LSF+   TS S +C  +++  W ++
Sbjct: 1504 CSIMEQTFSENPNNMLIEGINSPDSYPVQSYICDLLSFVLQCTSFSPLC--ISSHQWTET 1561

Query: 1311 LLYLLSISPSGLCKLNLLRARLLTLNLLTAILPH---AQQGELGIITELLTQLSHNMWKV 1367
            LL L   S +     +  R +LL L LL  ILP+   +  G   I+  L  QL  NMW +
Sbjct: 1562 LLRLAQCSTTMFLAEHF-RCKLLILRLLRQILPYLKSSNSGRKKIVKTLFEQLGTNMWLI 1620

Query: 1368 PRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECG 1427
            P+ V +  A  K+E+LDKQ+ ++ C   S  S ++    V     SF +EK   C +E  
Sbjct: 1621 PQKVENITAYLKQEDLDKQMGNI-CLNDSNDSMSNHNIDVGELPFSFHEEKSFNCIIE-N 1678

Query: 1428 GQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGD 1487
              ++IH  G R Y + +     G YQWKF I+ EHKGNEG+CIG++R+PI+D N+RTT D
Sbjct: 1679 SHTVIHAHGGRAYALGSTPFESGVYQWKFFILKEHKGNEGSCIGISRYPIKDQNYRTTSD 1738

Query: 1488 MWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTS 1547
            MWLYRAY+G +YH G+ + +L +FTQGDYIT + D +++TLSF KN + P +AFQ++DT 
Sbjct: 1739 MWLYRAYNGILYHGGQISLVLKTFTQGDYITAIFDTESRTLSFAKNNDYPVVAFQNIDTK 1798

Query: 1548 APLYPIVLFYSTNANGEKVKITDMTVCETPR-DLLCGEPYCAPVPILMVESYISLLRQLH 1606
              LYP VL YST A G+K+KI+D         +L  GEPY AP+   + E+YI+++R LH
Sbjct: 1799 TKLYPCVLCYST-AAGQKIKISDYRAERNKNTELFAGEPYLAPMFTCITENYITIIRILH 1857

Query: 1607 KIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADKGRLV---LEEAQMELLCRE 1663
              D+W   VN+C+L++LS +K +       +    +  + +   +   +EE  +  LC +
Sbjct: 1858 NTDQWLIEVNECILEQLSFLKGVLPEVRFKDRILDISGSIQKEPICEHIEEVDINALCEK 1917

Query: 1664 VWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDLPRD 1719
            VWPAL V+GG D GL++ G+C +      GT++GTLK+G    K +  D+ D   D
Sbjct: 1918 VWPALAVIGGLDRGLKVDGRCYDLDQKSFGTIMGTLKKGFTTAKVMREDKNDTVSD 1973



 Score =  191 bits (485), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 189/372 (50%), Gaps = 25/372 (6%)

Query: 191  YTWGCNLHHQILDEVRGKC----SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
            Y WG   + Q+ D   G+C    S  ++Q+     R I  GQ CTF+L S G +L  G+G
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIKIQNFKIAQR-IVCGQNCTFVLTSQGTVLSCGEG 3453

Query: 247  WLG-LANTTIQPLPKRVPLEA----AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G L +     LP    + A     I  +S S  S+ H L +T  GEV+SWG G+ GKL
Sbjct: 3454 NYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKL 3513

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            GHGN   QR+PKLI   LY   V QV+ GH HSA +++DG +Y +G  +HG+LG G   +
Sbjct: 3514 GHGNNERQRKPKLI-ESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHIN 3572

Query: 362  RHTPTLVTE--LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            +  PT +      ++  ++CG++HT+ + ++   VW+ G G  GKLG      +  P+ I
Sbjct: 3573 KKRPTKIVHKGFLNIKYIACGQNHTICIGEN--VVWAFGEGEGGKLGIGSKKDIYVPQEI 3630

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGL-GLRSSSISFHT----PVLVTGLSSHQI 474
              L    ++K   G  F++ L+ DG ++  G   L+ ++   +T    P  +       +
Sbjct: 3631 ITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIV 3690

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN--PVDQPSKVVGLEDVCVRQICA 532
             DV+ G  HVL L+    V+AWG+N  G  G   F +  PV +P  +  L D  ++QI  
Sbjct: 3691 TDVATGPDHVLVLTARGHVWAWGNNCEGILG---FGHDLPVQKPMIIQILSDKNIKQIAT 3747

Query: 533  GSLFSIAYTVPP 544
                  A+T  P
Sbjct: 3748 SRTHCAAWTAEP 3759


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Ornithorhynchus anatinus]
          Length = 4866

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 307/737 (41%), Positives = 441/737 (59%), Gaps = 72/737 (9%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLR----------------SRVPLTKSLPP------YNAALNLLEE 120
                       + SLR                S +  +K LP       ++  +N+L +
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVSAMEKSKLLPSLEGMISFDCFMNILMQ 305

Query: 121 VLRP----ATHYQ-VDLIRSA---CLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTP 172
           + R     A   Q  +  R++   C +Y   + L ++  +   D   + ++ D       
Sbjct: 306 MRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPD------- 358

Query: 173 KLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTF 232
             +   GDT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF
Sbjct: 359 --SIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTF 416

Query: 233 LLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSE 287
           ++ + G +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+E
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           GEV+SWG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           EGD GRLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTP 463
            DT +V  PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            LV  L++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+
Sbjct: 657 KLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLD 716

Query: 524 DVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGD 583
            V ++QI AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +   
Sbjct: 717 GVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINS 774

Query: 584 YI---PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMET 640
            I   PF S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D   
Sbjct: 775 EIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSV 834

Query: 641 SPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLH 696
             EI+ ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL 
Sbjct: 835 PDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQ 894

Query: 697 KNEELAHIFYFDQNQDT 713
            +  +A +  +    D 
Sbjct: 895 DHTHVASLLGYSSPSDA 911



 Score =  365 bits (938), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 221/571 (38%), Positives = 309/571 (54%), Gaps = 88/571 (15%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLL-------------- 1260
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL              
Sbjct: 1808 STALKVASTRLLQILAITTGTYADQLSPKVVQSLLDLLCSQLKNLLSQAGVLLMVSFGEE 1867

Query: 1261 ----------PPSDTQG-NLEHDVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLAT 1304
                        +D+ G N + D        H  E +L  +L F+  + S   +   +A+
Sbjct: 1868 GEEEEEGGEEKKADSSGENEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMAS 1927

Query: 1305 QPWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLT 1358
              W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L +
Sbjct: 1928 PKWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFS 1987

Query: 1359 QLSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDS 1411
             LS  MW+ P   A H    KE+E + +++              +QG ++       I  
Sbjct: 1988 LLSDCMWETPIAQAKHAIQIKEKEQEMKLQ--------------KQGELEEEDENLPIQE 2033

Query: 1412 VSFDKEKCVCCTVECGGQSLIHGPGTRGYG-----VANIGITRGCYQWKFLIVNEHKGNE 1466
            VSFD EK  CC VE   + +       GY          G+T GCYQWKF IV E++GNE
Sbjct: 2034 VSFDPEKAQCCLVE--KRQIFXXXXDSGYKYYTNXXXXTGVTSGCYQWKFYIVKENRGNE 2091

Query: 1467 GTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQ 1526
            GTC+GV+RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+
Sbjct: 2092 GTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEAR 2151

Query: 1527 TLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPY 1586
            T+SFGKNGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P 
Sbjct: 2152 TISFGKNGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPI 2209

Query: 1587 CAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKE-LTAAAEEDNASAFV--- 1642
            C+P+  ++ E+ I L+R LH+ DRW   +N+ +++RL  IK  +    ++   S  V   
Sbjct: 2210 CSPMATVLAEATIQLIRILHRTDRWTHCINKKMMERLHKIKTCIKETGQKLKKSRSVQSR 2269

Query: 1643 -----------------PQADKGRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCV 1685
                               +  G   L E Q++ LC EVWP L V+GG D GLR+GG+CV
Sbjct: 2270 EESEQREERESKEEEKGKHSRHGLAELSELQLKTLCLEVWPVLAVIGGVDAGLRVGGRCV 2329

Query: 1686 EKPSGRVGTLLGTLKEGIAKVKDLNFDEIDL 1716
             K +GR  TLLG +KEG    K + +DE ++
Sbjct: 2330 HKQTGRHATLLGVVKEGSTSAK-VQWDEAEI 2359



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/367 (39%), Positives = 210/367 (57%), Gaps = 15/367 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R         S  S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4004 VYLWGAGRHGQLAEAGRNVMIPAGAPSF-SQAQQVICGQNCTFVIQANGTVLACGEGSYG 4062

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4063 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4122

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG ++T+G GD+GRLG G+  ++  
Sbjct: 4123 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKL 4181

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4182 PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4241

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+   I DV
Sbjct: 4242 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDV 4301

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LA++   +VYAWGSN+ GQ G  + +N V +P+ +  L+   +RQI AG   S
Sbjct: 4302 AVGAEHTLAITSTGDVYAWGSNSEGQLGLGH-TNHVREPTLITVLQGKNIRQISAGRCHS 4360

Query: 538  IAYTVPP 544
             A+T PP
Sbjct: 4361 AAWTAPP 4367



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 28/163 (17%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +   L  
Sbjct: 1028 DIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLD 1087

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1088 LLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDLERTIAL 1147

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            LIG+ LG ML G P + EE +T +WLKT L S G+E  T  +D
Sbjct: 1148 LIGRCLGGMLQGSPVSPEEQDTAYWLKTPLFSDGVEMDTPHLD 1190


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  518 bits (1333), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 303/752 (40%), Positives = 442/752 (58%), Gaps = 75/752 (9%)

Query: 27  ILRSSSVATSTLG------NQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLR 80
           +LR S +  +T G      N V+ T++ +V +LPPLSL+NE+++ ++G++ L+QV+ FL+
Sbjct: 172 LLRQSWMMPATAGTGLSLCNDVIRTAIEVVSSLPPLSLANESKIPAMGLDCLSQVTAFLK 231

Query: 81  QTVTSTSPK----------------------------------ADKTVQSSLRSR-VPLT 105
                 S                                    A   V +  +SR +P  
Sbjct: 232 GVTVPNSGADTLGRRLASELLLGLAAQRGSLRYLLEWIEMALGASAVVNAMEKSRTLPAQ 291

Query: 106 KSLPPYNAALNLLEEVLRP----ATHYQ-VDLIRSA---CLVYLILVTLADDNIKPLGDR 157
           + +  ++  +N+L ++ R     A   Q  +  R++   C +Y   + L ++  +   D 
Sbjct: 292 EGMVGFDCFMNILMQMRRSLGSSADRSQWKEPTRTSDGLCSLYEAALCLFEEVCRMASDY 351

Query: 158 KSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSL 217
             + ++ D   T         GD  +     +VY WG N  HQ+++  + K  +P+L   
Sbjct: 352 SRTCASPDSIQTG--------GDAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPS 403

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLS 272
            S+ + IEAGQ+CTF++ + G +   GKG    LGL ++  Q   K++  E   +I  +S
Sbjct: 404 FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVS 463

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            SK S+ H L  T+EGEV+SWG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ 
Sbjct: 464 SSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYR 523

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           HSAAVTEDG LYTWGEGD GRLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG 
Sbjct: 524 HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGR 583

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TVWS G G+ GKLGH DT +V  PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG  
Sbjct: 584 TVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG 643

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG  SS  +   P L+  L++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N
Sbjct: 644 ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN 703

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLI 568
            + P+ +P KV GL+ V ++QI AG+  S+A+T  P +  + +   P CVD+   TF+ +
Sbjct: 704 STGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHL 763

Query: 569 REFLEQYSACFETGDYI---PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNET 625
           R FLEQY  C +    +   PF S   H  F+ L L+LLS+HL LAL G  ++S+LG + 
Sbjct: 764 RSFLEQY--CDKINSEVPPLPFPSSREHHHFLKLCLKLLSNHLALALAGGVATSILGRQA 821

Query: 626 AALRHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLS 681
             LR++LF+L+D     EI+ ++ + L++GA++LLPP+ E+++LL +LL Q       LS
Sbjct: 822 GPLRNLLFRLMDSSVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLS 881

Query: 682 NGQRMLLGVITSSLHKNEELAHIFYFDQNQDT 713
            GQRM L +I +SL  +  +A +  +    D 
Sbjct: 882 KGQRMQLDIILTSLQDHTHVASLLGYSSPSDA 913



 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/581 (39%), Positives = 320/581 (55%), Gaps = 90/581 (15%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1845 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGGVLMASFGKK 1904

Query: 1264 -----------DTQGNLEHDVHN--------HTEERNLAYYLSFIYSLTSVSTVCQLLAT 1304
                         + N E +  +        H  E +L  +L F+  + S   +   +A+
Sbjct: 1905 EDGELEPEEEKKAESNGESERRDFRVALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMAS 1964

Query: 1305 QPWIQSLLYLLSISP-SGLCKLNLLRARLLTLNLLTAILPHAQQGELG-----IITELLT 1358
              W + LL + S    SG+  +  LR RLL L++L A+LP  + G        +I  L +
Sbjct: 1965 PKWTEVLLNIASQKCCSGVPLVGNLRTRLLALHVLEAVLPACESGVEDDQMDQVIERLFS 2024

Query: 1359 QLSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEK 1418
             LS  MW+ P   A H    KE+E + +++        G S    +  + I  VSFD EK
Sbjct: 2025 LLSDCMWESPVAQAKHVIQIKEKEQEMKLQK------QGESEEEDEN-LPIQEVSFDPEK 2077

Query: 1419 CVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIR 1478
              CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ 
Sbjct: 2078 AQCCIVE-SGQVLTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVH 2136

Query: 1479 DYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPH 1538
            D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP 
Sbjct: 2137 DFNHRTTSDMWLYRAYSGNLYHNGEQTLTLTSFTQGDFITCVLDMEARTISFGKNGEEPK 2196

Query: 1539 LAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESY 1598
            LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ 
Sbjct: 2197 LAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVATVLAEAT 2254

Query: 1599 ISLLRQLHKIDRWKAHVNQCLLDRLSVI----KELTAAAEEDNASAFVPQA-DKGRLV-- 1651
            + L+R LH+ DRW   +N+ + +RL  I    KE ++++    +S    Q   K R V  
Sbjct: 2255 VQLIRILHRTDRWTHCINKKMAERLHKIKCCLKEASSSSAAATSSVAAGQKLKKSRSVQS 2314

Query: 1652 ------------------------------------LEEAQMELLCREVWPALVVMGGGD 1675
                                                L E Q++ LC EVWP L V+GG D
Sbjct: 2315 REESEAREEKEKEAEEQQRGKHGGGGSSGGRHGLADLSEPQLKTLCVEVWPVLAVIGGVD 2374

Query: 1676 DGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDL 1716
             GLR+GG+CV + +GR  TLLG +KEG A  K + +DE ++
Sbjct: 2375 GGLRVGGRCVHRQTGRHATLLGVVKEGSASAK-VQWDEAEI 2414



 Score =  250 bits (638), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 159/420 (37%), Positives = 227/420 (54%), Gaps = 19/420 (4%)

Query: 166  IDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE 225
            +D  S P  T    D  +      V+ WG   H Q+ +  R   S P   S     + + 
Sbjct: 4067 MDEQSCPWATSRPEDWHLG-GKCDVFLWGAGRHGQLAEAGRNAVSPPPSPSF-CQAQQVI 4124

Query: 226  AGQFCTFLLDSTGGLLVYGKG---WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAH 280
             GQ CTF++ + G +L  G+G    LG  N+  +  L     L+  +V+  V+ C S+ H
Sbjct: 4125 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4184

Query: 281  VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
             + +T  GEV+SWG G++GKLGHGN+  QRRP+ I   L G+ V Q+S G  HSA VT D
Sbjct: 4185 SMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTAD 4243

Query: 341  GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMG 398
            G L+T+G GD+GRLG G+  ++  P  V  L    +G V+CG +HTLV+S DG  VW+ G
Sbjct: 4244 GKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFG 4303

Query: 399  SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLR 454
             G+ GKLG  ++   ++P+ ++ L    ++KV  GT FSVALT DG V+ +G    +GL 
Sbjct: 4304 DGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 4363

Query: 455  SSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
                  H  P  V  LS   + D+++G  H LALS   +VYAWGSN+ GQ G  + +N V
Sbjct: 4364 EGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGH-TNHV 4422

Query: 514  DQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             +P+ V  L+   VRQI AG   S A++ PP          PL +   D  P  F  ++E
Sbjct: 4423 REPTLVTSLQGKSVRQISAGRCHSAAWSSPPVPPRAPGVSVPLQLGLPDAVPPQFGALKE 4482



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 33/171 (19%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +   L  
Sbjct: 1031 DIFSRSAILLKESSWNGSVGEKLRDVVYVSAAGSMLCQIVNSLLLLPVSVARPLLSFLLD 1090

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1091 LLPPLDRLNRLLPAAALLEDQELQWPLHGGPELVDPSGVPLPQPAQSWVWLVDLERTVAL 1150

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIIDIDKFVRDM 933
            LIG+ LG ML G P + EE +T  WLKT L S G+E     +DI +  + M
Sbjct: 1151 LIGRCLGGMLQGSPASPEEQDTAFWLKTPLFSDGVE-----MDIPQLEKSM 1196


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
           domestica]
          Length = 4790

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 303/737 (41%), Positives = 438/737 (59%), Gaps = 72/737 (9%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLR----------------------SRVPLTKSLPPYNAALNLLEE 120
                       + SLR                        +P  + +  ++  +N+L +
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVHTMEKNKLLPSQEGMISFDCFMNILMQ 305

Query: 121 VLRP----ATHYQ-VDLIRSA---CLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTP 172
           + R     A   Q  +  RS+   C +Y   + L ++  +   D   + ++ D       
Sbjct: 306 MRRSLGSSADRSQWREPTRSSDGLCSLYEAALCLFEEVCRMASDYSRTCASPD------- 358

Query: 173 KLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTF 232
             +   GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF
Sbjct: 359 --SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTF 416

Query: 233 LLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSE 287
           ++ + G +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+E
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           GEV+SWG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG 536

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           EGD GRLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTP 463
            DT +V  PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            L+  L++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLD 716

Query: 524 DVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGD 583
            V ++QI AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +   
Sbjct: 717 GVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINS 774

Query: 584 YI---PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMET 640
            I   PF S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D   
Sbjct: 775 EIPPLPFPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSV 834

Query: 641 SPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLH 696
             EI+ ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL 
Sbjct: 835 PDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQ 894

Query: 697 KNEELAHIFYFDQNQDT 713
            +  +A +  +    D 
Sbjct: 895 DHTHVASLLGYSSPSDA 911



 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/562 (40%), Positives = 315/562 (56%), Gaps = 81/562 (14%)

Query: 1218 LREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS-------------- 1263
            L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +              
Sbjct: 1736 LKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLLQAGVLLMVSFGEGEEE 1795

Query: 1264 ---------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWI 1308
                     D  G++E           H  E +L  +L F+  + S   +   +A+  W 
Sbjct: 1796 EEEEEEKKVDPCGDIEKRDFRAVLRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWT 1855

Query: 1309 QSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLSH 1362
            + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS 
Sbjct: 1856 EVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSD 1915

Query: 1363 NMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSFD 1415
             MW+ P   A H    KE+E + +++              +QG ++       I  VSFD
Sbjct: 1916 CMWETPIAQAKHAIQIKEKEQEMKLQ--------------KQGELEEEDENLPIQEVSFD 1961

Query: 1416 KEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRW 1475
             EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RW
Sbjct: 1962 PEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRW 2020

Query: 1476 PIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGE 1535
            P+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGE
Sbjct: 2021 PVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGE 2080

Query: 1536 EPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMV 1595
            EP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ 
Sbjct: 2081 EPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLA 2138

Query: 1596 ESYISLLRQLHKIDRWKAHVNQCLLDRLS----VIKELTAAAEEDNA------------- 1638
            E+ I L+R LH+ DRW   +N+ +++RL      IKE+    ++  +             
Sbjct: 2139 EATIQLIRILHRTDRWTHCINKKMMERLHKIKMCIKEIGQKLKKSRSVQSREENEMREEK 2198

Query: 1639 ----SAFVPQADKGRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGT 1694
                      +  G   L E Q++ LC EVWP L V+GG D GLR+GG+CV K +GR  T
Sbjct: 2199 ENKEEEKGKHSRHGLADLSELQLKTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHAT 2258

Query: 1695 LLGTLKEGIAKVKDLNFDEIDL 1716
            LLG +KEG    K + +DE ++
Sbjct: 2259 LLGVVKEGSTSAK-VQWDEAEI 2279



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/396 (37%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3928 VYLWGAGRHGQLAEAGR-NVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 3986

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 3987 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4046

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4047 NSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4105

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4106 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4165

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I D+
Sbjct: 4166 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDI 4225

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ +  L+   +RQI AG   S
Sbjct: 4226 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLITILQGKNIRQISAGRCHS 4284

Query: 538  IAYT---VPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
             A+T   VPP    +S        D  P  +  ++E
Sbjct: 4285 AAWTASPVPPRAPGVSVPLQLGLPDTVPPQYGALKE 4320


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
           gallus]
          Length = 4860

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 306/731 (41%), Positives = 435/731 (59%), Gaps = 60/731 (8%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97  SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRSA-------CLVYL 141
            L S + L   L     +L  L E +  A        T  +  L++S        C + +
Sbjct: 245 RLASELLL--GLAAQRGSLRYLLEWIEMALNASAVVNTMEKTKLLQSPEGMISFDCFMSI 302

Query: 142 ILV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNI 178
           ++                  T   D +  L +       +     +D   T     +   
Sbjct: 303 LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
           ++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ V ++Q
Sbjct: 663 AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQ 722

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
           I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE Y  C +    I   P
Sbjct: 723 ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHY--CDKINSEIPPLP 780

Query: 587 FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
           F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781 FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQE 840

Query: 647 LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
           ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841 VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703 HIFYFDQNQDT 713
            +  +    DT
Sbjct: 901 SLLGYSSPSDT 911



 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/558 (41%), Positives = 319/558 (57%), Gaps = 67/558 (12%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLL-------------- 1260
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL              
Sbjct: 1807 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGEE 1866

Query: 1261 ---------PPSDTQG-NLEHDVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                       +D+ G N + D        H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1867 EVEEHEAESKKADSNGENEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1926

Query: 1306 PWIQSLLYLLSISP-SGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1927 KWTEVLLNIASQKCCSGVPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1986

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKC 1419
            LS  MW+ P   A H    KE+E + +++        G S    +  + I  VSFD EK 
Sbjct: 1987 LSDCMWETPIAQAKHAIQIKEKEQEMKLQK------QGESEDEDEN-LPIQEVSFDPEKA 2039

Query: 1420 VCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRD 1479
             CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D
Sbjct: 2040 QCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHD 2098

Query: 1480 YNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHL 1539
            +NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP L
Sbjct: 2099 FNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKL 2158

Query: 1540 AFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYI 1599
            AF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I
Sbjct: 2159 AFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATI 2216

Query: 1600 SLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------------ 1647
             L+R LH+ DRW   +N+ +++RL+ IK     A +    +   Q+ +            
Sbjct: 2217 QLIRILHRTDRWTHCINKKMMERLNKIKTCLKEAGQKLKKSRSIQSREENEVREEKENKE 2276

Query: 1648 ---------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGT 1698
                     G   L E Q+++LC EVWP L V+GG D GLR+GG+CV K +GR  TLLG 
Sbjct: 2277 EEKGKHNRHGLADLSELQLKMLCVEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHATLLGV 2336

Query: 1699 LKEGIAKVKDLNFDEIDL 1716
            +KEG    K + +DE ++
Sbjct: 2337 VKEGSTSAK-VQWDEAEI 2353



 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3998 VYLWGAGRHGQLAEAGR-NVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYG 4056

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4057 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4116

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4117 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 4175

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HT+ +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4176 PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL 4235

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  LS   I D+
Sbjct: 4236 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDI 4295

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LALS   +VYAWGSN+ GQ G  + +N V +P+ +  L+   +RQI AG   S
Sbjct: 4296 AVGAEHTLALSSTGDVYAWGSNSEGQLGLGH-TNHVREPTLITVLQGKNIRQISAGRCHS 4354

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  ++E
Sbjct: 4355 AAWTAPPVPPRAPGVSVPLQLGLPDAIPPQYGALKE 4390



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 28/156 (17%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +   L  
Sbjct: 1028 DIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLSQIVNSLLLLPVSVARPLLSYLLD 1087

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1088 LLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVSLPQPAQSWVWLVDLERTVAL 1147

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLE 918
            LIG+ LG ML GPP + EE +T +WLKT L S G+E
Sbjct: 1148 LIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVE 1183


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Meleagris gallopavo]
          Length = 4334

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 306/731 (41%), Positives = 435/731 (59%), Gaps = 60/731 (8%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97  SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRSA-------CLVYL 141
            L S + L   L     +L  L E +  A        T  +  L++S        C + +
Sbjct: 245 RLASELLL--GLAAQRGSLRYLLEWIEMALNASAVVNTMEKTKLLQSPEGMISFDCFMSI 302

Query: 142 ILV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNI 178
           ++                  T   D +  L +       +     +D   T     +   
Sbjct: 303 LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
           ++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ V ++Q
Sbjct: 663 AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQ 722

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
           I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE Y  C +    I   P
Sbjct: 723 ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHY--CDKINSEIPPLP 780

Query: 587 FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
           F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781 FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQE 840

Query: 647 LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
           ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841 VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703 HIFYFDQNQDT 713
            +  +    DT
Sbjct: 901 SLLGYSSPSDT 911



 Score =  398 bits (1023), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/558 (41%), Positives = 319/558 (57%), Gaps = 67/558 (12%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLL-------------- 1260
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL              
Sbjct: 1807 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGEE 1866

Query: 1261 ---------PPSDTQG-NLEHDVH-----NHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                       +D+ G N + D        H  E +L  +L F+  + S   +   +A+ 
Sbjct: 1867 EVEEHEADSKKADSNGENEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1926

Query: 1306 PWIQSLLYLLSISP-SGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 1927 KWTEVLLNIASQKCCSGVPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 1986

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKC 1419
            LS  MW+ P   A H    KE+E + +++        G S    +  + I  VSFD EK 
Sbjct: 1987 LSDCMWETPIAQAKHAIQIKEKEQEMKLQK------QGESEDEDEN-LPIQEVSFDPEKA 2039

Query: 1420 VCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRD 1479
             CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D
Sbjct: 2040 QCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHD 2098

Query: 1480 YNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHL 1539
            +NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP L
Sbjct: 2099 FNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKL 2158

Query: 1540 AFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYI 1599
            AF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I
Sbjct: 2159 AFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATI 2216

Query: 1600 SLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------------ 1647
             L+R LH+ DRW   +N+ +++RL+ IK     A +    +   Q+ +            
Sbjct: 2217 QLIRILHRTDRWTHCINKKMMERLNKIKTCLKEAGQKLKKSRSIQSREENEMREEKENKE 2276

Query: 1648 ---------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGT 1698
                     G   L E Q+++LC EVWP L V+GG D GLR+GG+CV K +GR  TLLG 
Sbjct: 2277 EEKGKHNRHGLADLSELQLKMLCVEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHATLLGV 2336

Query: 1699 LKEGIAKVKDLNFDEIDL 1716
            +KEG    K + +DE ++
Sbjct: 2337 VKEGSTSAK-VQWDEAEI 2353



 Score =  243 bits (621), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3472 VYLWGAGRHGQLAEAGR-NVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYG 3530

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 3531 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 3590

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 3591 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL 3649

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HT+ +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 3650 PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL 3709

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  LS   I D+
Sbjct: 3710 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDI 3769

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LALS   +VYAWGSN+ GQ G  + +N V +P+ +  L+   +RQI AG   S
Sbjct: 3770 AVGAEHTLALSSTGDVYAWGSNSEGQLGLGH-TNHVREPTLITVLQGKNIRQISAGRCHS 3828

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  ++E
Sbjct: 3829 AAWTAPPVPPRAPGVSVPLQLGLPDAIPPQYGALKE 3864



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 30/175 (17%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +   L  
Sbjct: 1028 DIYSRSATLLKESSWNGSVGEKLRDVIYVSAAGSMLSQIVNSLLLLPVSVARPLLSYLLD 1087

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1088 LLPPLDRLNRLLPAAALLEDQELQWPLHGGPELIDPAGVSLPQPAQSWVWLVDLERTVAL 1147

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIIDIDKFVRDMRHVS 937
            LIG+ LG ML GPP + EE +T +WLKT L S G+E    I  +DK +  +  V+
Sbjct: 1148 LIGRCLGGMLQGPPVSPEEQDTAYWLKTPLFSDGVE--MDIPHLDKCMSSLLEVA 1200


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4647

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 330/832 (39%), Positives = 459/832 (55%), Gaps = 85/832 (10%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG N  HQ+ +    K  +P+L    S+ + IEAGQ+CTF + + G +   GKG   
Sbjct: 372  VYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQMIEAGQYCTFSVSADGAVKACGKGSYG 431

Query: 247  WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LGL ++  Q +PK++ LE    +  +S SK S+ H L VT+EGEV+SWG G++GKLGHG
Sbjct: 432  RLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLGHG 491

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+ +Q+ PK+I G L GK V  VSAG+ HSAAVT DG LYTWGEGD GRLGH D  SR+ 
Sbjct: 492  NSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSHSRNV 551

Query: 365  PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
            PTLV ++S VG V+CG SHT+ ++QDG  VWS G G+ GKLGH DT +V  PKVIEAL  
Sbjct: 552  PTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHG 611

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
            F +RKVCAG+  S+ALT  G VF WG    LG  SS  +   P L+  LS  +I+D+S G
Sbjct: 612  FIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRLIEELSITKIIDISCG 671

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
            DSH LALS  NEV+AWG+N MGQCGQ + S PV +P KV+GLE V ++QI AG+  S+A+
Sbjct: 672  DSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAW 731

Query: 541  TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDY--IPFCSKVTHAQFIL 598
            T  P++  L +   P CVD+   TFT +R FLE+Y     +GD    PF SK  H QF+L
Sbjct: 732  TAVPTDRQLVAWHRPFCVDLEESTFTYLRSFLERYCDSI-SGDTPPAPFPSKREHHQFVL 790

Query: 599  LLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAIGASL 658
            L ++LLS HL LA  G   ++VLG +   LR++LF+L+D      I+  +   L++GASL
Sbjct: 791  LCMKLLSIHLSLAHAGGTGATVLGAQGRPLRNLLFRLIDSNVPESIQQAVISTLSMGASL 850

Query: 659  LLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAHIFYF------- 707
            LLPP+ E+ +LL +LL Q       LS GQR+ L ++ +SL +   +A +  +       
Sbjct: 851  LLPPLRERTELLHSLLPQGPESWESLSKGQRLQLDMVLNSLQEQSHVASLLGYSSPGELS 910

Query: 708  ------------------DQNQDTNILMLEDLLKISCRKSYAYTLTHFQSNACKVSPQET 749
                              +     ++ + E LLK        YT   F         Q  
Sbjct: 911  AGLALPPTPDRPTGSVSSNSESPDHLHLAEVLLKTLLLSIGFYTERAFGELEKNSDKQRF 970

Query: 750  PVSQVVTLLQSLIITQYVVKHSEICEEVYQH--------------YLDIVFPHVIDILER 795
              SQ  T   S         H  +    Y H              +L ++ P+  +   R
Sbjct: 971  SQSQKQTEAPSHFHHLLSALHRHLLAHCYIHTGAEDDSSVLLLHKHLCLLLPYAAETFRR 1030

Query: 796  SIAWVNQGK-DIEVLNEL---LYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLAILPLL 851
            S   + +   D  V+N+L   L+ S+AG +L  +++SLL+     + P L + L +L  L
Sbjct: 1031 STILLEESTLDKHVINKLHTVLFGSVAGSLLCQVMYSLLLLPLAVVKPLLPHLLTLLEHL 1090

Query: 852  DSLNQLLP---------MQGNYT------------ETNSFLWLIDMERALALLIGKTLGD 890
            + LN  LP         ++GN              E++ + WL+D+ER++AL IG+ LG 
Sbjct: 1091 NELNCYLPNTAHLEDMELEGNLQEPSEISEPVVVEESDDWAWLLDLERSVALAIGRCLGG 1150

Query: 891  MLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIIDIDKFVRDMRHVSNNILM 942
            ML GPP + +E     WL   LL  GLE     ID ++    M  ++  + M
Sbjct: 1151 MLQGPPPSIQEKTAEFWLCNPLLRNGLE-----IDFEQLDWAMGWLTEAVFM 1197



 Score =  352 bits (902), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 216/544 (39%), Positives = 294/544 (54%), Gaps = 68/544 (12%)

Query: 1221 VSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPSDTQGNLEHDVHNHTE-- 1278
             ++ ++ I AIA ++  E L   V   L   +   L+ LL     Q  LE    N TE  
Sbjct: 1775 AAARLLQIFAIAASSCEEALPLDVSQALMDVMSEQLQGLLHAVHQQEVLER---NSTESI 1831

Query: 1279 ---------------------ERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLLSI 1317
                                 E  LA +L F+  + S+    ++ A   WI  L+ ++S 
Sbjct: 1832 PEETPKQEIADVVRSSSSRVVESQLADFLVFLRRILSLRVAKRVSAFVKWIDPLMTVISY 1891

Query: 1318 S-PSGLCKLNLLRARLLTLNLLTAILPHAQQGEL--GIITELLTQLSHNMWKVPRTVAHH 1374
               SG  +   LR +LL  ++L A+LP      +   I+ +L + LS  MW+ P  VA  
Sbjct: 1892 KCSSGNPRFYNLRTKLLAFHILEALLPACADPVIMKQIVDQLFSLLSTYMWEEP--VALR 1949

Query: 1375 NALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSLIHG 1434
             A+ KE     + +           + S    + I   SFD  K +CC++E  G  L HG
Sbjct: 1950 KAVDKERTESSEKD-----------SGSEDECIPIGDFSFDPHKLICCSLE-SGNVLSHG 1997

Query: 1435 PGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAY 1494
             G +GYG+A   IT GC+ WKF I  E++GNEGTCIGV+RWPIRDYNHRTT DMWLYRAY
Sbjct: 1998 SGGKGYGLATTAITSGCFIWKFYITKENRGNEGTCIGVSRWPIRDYNHRTTTDMWLYRAY 2057

Query: 1495 SGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIV 1554
            SG++YH GE    LPSFTQGD IT +LDM+A+T+SF KN  EP LAF+ +D +  LYP V
Sbjct: 2058 SGSLYHGGELGRALPSFTQGDTITCILDMEARTISFAKNNREPKLAFEGVDATE-LYPCV 2116

Query: 1555 LFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAH 1614
            LFYS+N  GEKV + D+ +   P DLL GEP C+P   +++ES I LLR+L+  D W  H
Sbjct: 2117 LFYSSNP-GEKVALCDLQMRGMPSDLLPGEPLCSPRATVLLESTIQLLRRLYVNDDWLQH 2175

Query: 1615 VNQCLLDRLSVIKEL---------TAAAEED--------NASAFVPQAD-----KGRLVL 1652
            +NQ +L++L +I  L          A+ E D         ASA+           G   L
Sbjct: 2176 INQHMLNKLQLINPLMRDGHSKMGQASKESDEKCGLNRERASAWADVGSSSDHLSGPAGL 2235

Query: 1653 EEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFD 1712
             +AQ+ +LC EVWP + ++GG D GLR GG C+ K SGR  TLLG LKEG + +  L ++
Sbjct: 2236 SDAQLSVLCCEVWPVMALIGGVDSGLRAGGTCLHKSSGRRATLLGVLKEG-SPLAKLQWE 2294

Query: 1713 EIDL 1716
            E D 
Sbjct: 2295 ETDF 2298



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 146/307 (47%), Gaps = 36/307 (11%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
            S+VY WG   H Q+ D      S P L    S  + +  GQ CTFL+ + G +L  G+G 
Sbjct: 3860 SEVYLWGNGRHGQLAD-AGTSASVPTLAPSLSQTQQVVCGQNCTFLVQANGTVLAVGEGS 3918

Query: 247  --WLGLANTTIQPLPKRV-PLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
               LG  N+     P  +  L+  +V+ L  S  S+ H L +T  GEV+SWG G++GKLG
Sbjct: 3919 YGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLG 3978

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            HGN+  QRRPK I  GL G+ V Q++ G  HSA VT DG L+T+G GD GRLG     ++
Sbjct: 3979 HGNSERQRRPKQIE-GLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNK 4037

Query: 363  HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
              P  VT L                  DGH +       L  L          P++I AL
Sbjct: 4038 MIPERVTAL------------------DGHHI----GQRLIGLPDAMLKNHNRPQIIPAL 4075

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
                +  +  G    +AL+  G V+ WG      LGL  S+     P+LVT L    I  
Sbjct: 4076 EGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSN-PVKEPILVTTLQGKNIRQ 4134

Query: 477  VSIGDSH 483
            +S G  H
Sbjct: 4135 ISAGRCH 4141



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 139/274 (50%), Gaps = 28/274 (10%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS--- 332
            C +     V + G V + G G +G+LG GN+     P +I   L G  VTQ+   +    
Sbjct: 3897 CGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTII-SALQGYVVTQLVTSYGSDG 3955

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQD 390
            HS A+TE G +++WG+GD+G+LGHG+ + +  P  +  L   +V  ++CG  H+ V++ D
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTAD 4015

Query: 391  GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            G  +++ GSG+ G+LG   T     P+ + AL    + +                     
Sbjct: 4016 GK-LFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRL------------------- 4055

Query: 451  LGLRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            +GL  + +  H  P ++  L    I D+++G  H+LALS   +VYAWG N   Q G  + 
Sbjct: 4056 IGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGH- 4114

Query: 510  SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP 543
            SNPV +P  V  L+   +RQI AG   S A+T P
Sbjct: 4115 SNPVKEPILVTTLQGKNIRQISAGRCHSSAWTTP 4148



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 8/76 (10%)

Query: 18  WSNEKLENIILRSSSVATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVST 77
           W   +LEN       VA   L N+VL T+ S++  LPPLSL+NE ++ ++G++ L QV  
Sbjct: 184 WQRGRLEN----PPDVA---LCNEVLATASSVLAALPPLSLANENKIPTVGLDCLAQVGD 236

Query: 78  FLRQTVTSTSPKADKT 93
           FL++T  S S  AD+ 
Sbjct: 237 FLKKTAVSGS-GADRA 251


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 301/733 (41%), Positives = 435/733 (59%), Gaps = 58/733 (7%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 185 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 243

Query: 92  ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                       + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 244 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNTMEKSKLLSS--QEGMISFDCFMTIL 301

Query: 143 LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
           +                  T   D +  L +       +     +D   T     +   G
Sbjct: 302 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 361

Query: 180 DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 362 DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 421

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 481

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GRL
Sbjct: 482 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 541

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           GHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V 
Sbjct: 542 GHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVY 601

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLS 470
            PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L+
Sbjct: 602 KPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELA 661

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
           + +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++QI
Sbjct: 662 ATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQI 721

Query: 531 CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---PF 587
            AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   PF
Sbjct: 722 SAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLPF 779

Query: 588 CSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETL 647
            S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ +
Sbjct: 780 PSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEV 839

Query: 648 LTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAH 703
           + + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A 
Sbjct: 840 VIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVAS 899

Query: 704 IFYFDQNQDTNIL 716
           +  +    D   L
Sbjct: 900 LLGYSSPSDAADL 912



 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/422 (46%), Positives = 263/422 (62%), Gaps = 51/422 (12%)

Query: 1328 LRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLSHNMWKVPRTVAHHNALKKEEE 1382
            LR RLL L++L A+LP  + G        ++  L + LS  MW+ P   A H    KE+E
Sbjct: 1606 LRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSDCMWETPIAQAKHAIQIKEKE 1665

Query: 1383 LDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSFDKEKCVCCTVECGGQSLIHGP 1435
             + +++              +QG ++       I  VSFD EK  CC VE  GQ L HG 
Sbjct: 1666 QEIKLQ--------------KQGELEEEDENLPIQEVSFDPEKAQCCLVE-NGQILTHGS 1710

Query: 1436 GTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYS 1495
            G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRTT DMWLYRAYS
Sbjct: 1711 GGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYS 1770

Query: 1496 GNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVL 1555
            GN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+D +A LYP V+
Sbjct: 1771 GNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVD-AAELYPCVM 1829

Query: 1556 FYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHV 1615
            FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I L+R LH+ DRW   +
Sbjct: 1830 FYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATIQLIRILHRTDRWTYCI 1888

Query: 1616 NQCLLDRLSVIKELTAAAEEDNASAFVPQADK---------------------GRLVLEE 1654
            N+ +++RL  IK     + +    +   Q+ +                     G   L E
Sbjct: 1889 NKKMMERLHKIKMCIKESGQKLKKSRSVQSREENEMREEKESKEEEKGKHGRHGLADLSE 1948

Query: 1655 AQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEI 1714
             Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  TLLG +KEG    K + +DE 
Sbjct: 1949 PQLRTLCMEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHATLLGVVKEGSTSAK-VQWDEA 2007

Query: 1715 DL 1716
            ++
Sbjct: 2008 EI 2009



 Score =  238 bits (606), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/394 (38%), Positives = 214/394 (54%), Gaps = 25/394 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3537 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 3595

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 3596 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 3655

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 3656 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 3714

Query: 365  PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
            P           V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L  
Sbjct: 3715 PE---------RVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG 3765

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDVSI 479
              ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+   I DV++
Sbjct: 3766 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAV 3825

Query: 480  GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S A
Sbjct: 3826 GAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHSAA 3884

Query: 540  YTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
            +T PP          PL +   D  P  +  +RE
Sbjct: 3885 WTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 3918


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 370/1007 (36%), Positives = 528/1007 (52%), Gaps = 166/1007 (16%)

Query: 37   TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
            +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187  SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97   SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
             L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245  RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147  ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                 + LG   DR      T                         D   T     +   
Sbjct: 303  LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363  GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423  SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483  GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543  LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
              PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603  YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            ++ +IVDVSIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663  AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCS 589
            I AG+  S+A+T  P +                      RE                   
Sbjct: 723  ISAGTSHSLAWTALPRD----------------------RE------------------- 741

Query: 590  KVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLT 649
               H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ ++ 
Sbjct: 742  ---HHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQEVVI 798

Query: 650  DCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAHIF 705
            + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A + 
Sbjct: 799  ETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLL 858

Query: 706  YFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF--- 737
             +    D   L                         + E L+K   R    YT   F   
Sbjct: 859  GYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAFGEL 918

Query: 738  QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLDIVF 786
            + N+ K       S    P      + +L + L+   ++   SE    V     +L ++ 
Sbjct: 919  EKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQLLL 978

Query: 787  PHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYP 839
            PH  DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +  
Sbjct: 979  PHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLS 1038

Query: 840  TLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLIDMER 878
             L   L        +LP  D L +Q L  P+ G                 S++WL+D+ER
Sbjct: 1039 YLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVDLER 1098

Query: 879  ALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
             +ALLIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1099 TIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1145



 Score =  360 bits (924), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 191/410 (46%), Positives = 250/410 (60%), Gaps = 64/410 (15%)

Query: 1328 LRARLLTLNLLTAILPHAQQGELGIITELLTQLSHNMWKVPRTVAHHNALKKEEELDKQI 1387
            LR RLL L++L A+LP  + G                      V      +K+ EL+++ 
Sbjct: 1854 LRTRLLALHVLEAVLPACESG----------------------VEDDQMAQKQGELEEED 1891

Query: 1388 EHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGI 1447
            E+L                  I  VSFD EK  CC VE  GQ L HG G +GYG+A+ G+
Sbjct: 1892 ENL-----------------PIQEVSFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGV 1933

Query: 1448 TRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTM 1507
            T GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  
Sbjct: 1934 TSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLT 1993

Query: 1508 LPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVK 1567
            L SFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+D +A LYP V+FYS+N  GEKVK
Sbjct: 1994 LSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVK 2051

Query: 1568 ITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIK 1627
            I DM +  TPRDLL G+P C+PV  ++ E+ I L+R LH+ DRW   +N+ +++RL  IK
Sbjct: 2052 ICDMQMRGTPRDLLPGDPICSPVAAVLAEATIQLIRILHRTDRWTYCINKKMMERLHKIK 2111

Query: 1628 ELTAAAEEDNASAFVPQADK---------------------GRLVLEEAQMELLCREVWP 1666
                 + +    +   Q+ +                     G   L E Q+  LC EVWP
Sbjct: 2112 ICIKESGQKLKKSRSVQSREENEMREEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWP 2171

Query: 1667 ALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDL 1716
             L V+GG D GLR+GG+CV K +GR  TLLG +KEG    K + +DE ++
Sbjct: 2172 VLAVIGGVDAGLRVGGRCVHKQTGRHATLLGVVKEGSTSAK-VQWDEAEI 2220



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3640 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 3698

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 3699 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 3758

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 3759 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 3817

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 3818 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 3877

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 3878 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 3937

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 3938 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTVVTGLQGKNVRQISAGRCHS 3996

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 3997 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4032


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
           harrisii]
          Length = 4865

 Score =  515 bits (1326), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 301/737 (40%), Positives = 439/737 (59%), Gaps = 72/737 (9%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLR----------------------SRVPLTKSLPPYNAALNLLEE 120
                       + SLR                        +P  + +  ++  +N+L +
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVHTMEKNKLLPSQEGMITFDCFMNILMQ 305

Query: 121 VLRP----ATHYQ-VDLIRSA---CLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTP 172
           + R     A   Q  +  R++   C +Y   + L ++  +   D   + ++ D       
Sbjct: 306 MRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPD------- 358

Query: 173 KLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTF 232
             +   GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF
Sbjct: 359 --SIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTF 416

Query: 233 LLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSE 287
           ++ + G +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+E
Sbjct: 417 VISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTE 476

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           GEV+SWG G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAV+EDG LYTWG
Sbjct: 477 GEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWG 536

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           EGD GRLGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH
Sbjct: 537 EGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTP 463
            DT +V  PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRP 656

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            L+  L++ +IVD+SIGDSH LALS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLD 716

Query: 524 DVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGD 583
            V ++QI AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +   
Sbjct: 717 GVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINS 774

Query: 584 YI---PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMET 640
            I   PF S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D   
Sbjct: 775 EIPPLPFPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSV 834

Query: 641 SPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLH 696
             EI+ ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL 
Sbjct: 835 PDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQ 894

Query: 697 KNEELAHIFYFDQNQDT 713
            +  +A +  +    D+
Sbjct: 895 DHTHVASLLGYSSPSDS 911



 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/476 (44%), Positives = 287/476 (60%), Gaps = 52/476 (10%)

Query: 1275 NHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLLSIS-PSGLCKLNLLRARLL 1333
             H  E +L  +L F+  + S   +   +A+  W + LL + S    SG+  +  LR RLL
Sbjct: 1899 QHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCSSGIPLVGNLRTRLL 1958

Query: 1334 TLNLLTAILPHAQQG-----ELGIITELLTQLSHNMWKVPRTVAHHNALKKEEELDKQIE 1388
             L++L A+LP  + G        ++  L + LS  MW+ P   A H    KE+E + +++
Sbjct: 1959 ALHVLEAVLPACESGVEDDQMAQVVERLFSLLSDCMWETPIAQAKHAIQIKEKEQEMKLQ 2018

Query: 1389 HLYCPPPSGTSNASRQGYVD-------IDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYG 1441
                          +QG ++       I  VSFD EK  CC VE  GQ L HG G +GYG
Sbjct: 2019 --------------KQGELEEEDENLPIQEVSFDPEKAQCCLVE-NGQILTHGSGGKGYG 2063

Query: 1442 VANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHS 1501
            +A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRTT DMWLYRAYSGN+YH+
Sbjct: 2064 LASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHN 2123

Query: 1502 GEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNA 1561
            GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+D +A LYP V+FYS+N 
Sbjct: 2124 GEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVD-AAELYPCVMFYSSNP 2182

Query: 1562 NGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLD 1621
             GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I L+R LH+ DRW   +N+ +++
Sbjct: 2183 -GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATIQLIRILHRTDRWTHCINKKMME 2241

Query: 1622 RLSVIKELTAAAEEDNASAFVPQADK---------------------GRLVLEEAQMELL 1660
            RL  IK       +    +   Q+ +                     G   L E Q++ L
Sbjct: 2242 RLHKIKMCIKETGQKLKKSRSVQSREENEMREEKENKEEEKGKHSRHGLADLSELQLKTL 2301

Query: 1661 CREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDL 1716
            C EVWP L V+GG D GLR+GG+CV K +GR  TLLG +KEG    K + +DE ++
Sbjct: 2302 CVEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHATLLGVVKEGSTSAK-VQWDEAEI 2356



 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4003 VYLWGAGRHGQLAEAGR-NVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4061

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4062 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4121

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4122 NSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4180

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4181 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4240

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4241 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4300

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ +  L+   +RQI AG   S
Sbjct: 4301 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLITVLQGKNIRQISAGRCHS 4359

Query: 538  IAYT---VPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
             A+T   VPP    +S        D  P  +  ++E
Sbjct: 4360 AAWTASPVPPRAPGVSVPLQLGLPDAIPPQYGALKE 4395



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 28/163 (17%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  I++SLL   +++ R +   L  
Sbjct: 1028 DIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIINSLLLLPVSVARPLLSYLLD 1087

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1088 LLPPLDCLNRLLPAAALLEDQELQWPLHGGPELIDPAGVPLPQPAQSWVWLVDLERTIAL 1147

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            LIG+ LG ML G P + EE +T +WLKT L S G+E     +D
Sbjct: 1148 LIGRCLGGMLQGSPGSPEEQDTAYWLKTPLFSDGVEMDIPQLD 1190


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 305/734 (41%), Positives = 433/734 (58%), Gaps = 60/734 (8%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97  SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
            L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245 RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVYTMEKNKLLSSQEGMISFDCFMAI 302

Query: 142 I------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLTYNI 178
           +      L + AD +      R S                     +D   T     +   
Sbjct: 303 LMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
           ++ +IVD+SIGDSH L+LS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663 AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
           I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723 ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587 FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
           F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781 FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647 LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
           ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841 VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703 HIFYFDQNQDTNIL 716
            +  +    D   L
Sbjct: 901 SLLGYSSPSDAADL 914



 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1819 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEG 1878

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 1879 EEGEEEEKKVDSSGEAEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 1938

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 1939 TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 1998

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 1999 DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 2044

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 2045 DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 2103

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 2104 WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 2163

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 2164 EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 2221

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 2222 AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREE 2281

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 2282 KENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 2341

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 2342 TLLGVVKEGSTSAK-VQWDEAEI 2363



 Score =  246 bits (629), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 4008 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4066

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4067 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4126

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4127 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4185

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4186 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4245

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4246 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4305

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4306 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4364

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4365 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4400



 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 28/163 (17%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +   L  
Sbjct: 1028 DIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLD 1087

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1088 LLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVDLERTIAL 1147

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            LIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1148 LIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 330/808 (40%), Positives = 464/808 (57%), Gaps = 68/808 (8%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG N  HQ+ +    K   P+L    S+ + IEAGQ+CTF + + G +   GKG   
Sbjct: 383  VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEAGQYCTFSVSTDGSVKACGKGSYG 442

Query: 247  WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LGL ++  Q LPK++ LE    I  +S SK S+ H L +T +GEV+SWG GE+GKLGHG
Sbjct: 443  RLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHG 502

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+ +Q+ PK+I G L+ K V   SAG+ HSAAVT+DG LYTWGEGD GRLGH D +SR+ 
Sbjct: 503  NSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNM 562

Query: 365  PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
            PTLV ++S VG V+CG SHT+ ++QDG TVWS G G+ GKLGH DT +V  PKVIEAL  
Sbjct: 563  PTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHG 622

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
            F +RKVCAG+  S+ALT  G VF WG    LG  SS  +   P  V  LS  +I+D+S G
Sbjct: 623  FIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLRPRFVEDLSITKIIDISCG 682

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
            DSH LALS  NEVYAWG+NTMGQCGQ + S P+ +P KV+GLE V ++QI AG+  S+A+
Sbjct: 683  DSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAW 742

Query: 541  TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGD-YIPFCSKVTHAQFILL 599
            T  P++  L +   P CVD+   TFT +  FL+ Y    E      PF SK  H QFILL
Sbjct: 743  TAVPTDRQLVAWHRPFCVDLEESTFTYLCNFLKCYCDGLENDTPPTPFLSKRDHQQFILL 802

Query: 600  LLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAIGASLL 659
             ++LLS HL LA  G   + VLG +   LR++LF+L+D      I+  + + L+IGASLL
Sbjct: 803  CMKLLSVHLSLAHAGGTGALVLGTQGRPLRNLLFRLIDSNMPDSIQKAVLNTLSIGASLL 862

Query: 660  LPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAHIFYFDQNQDTNI 715
            LPP+ E+ +LL +LL +     + LS GQR+ L ++ SSL     +A +  +    +  +
Sbjct: 863  LPPLRERTELLLSLLPRGPQSLNVLSKGQRLQLDMVLSSLQDQSYIASLLGYSSLGEVPV 922

Query: 716  L---------------------MLEDLLKISCRKSYAYTLTHF---QSNACK-----VSP 746
            L                     + E LL+        YT   F   + N+ K        
Sbjct: 923  LTATTSAQLPSSSAAEVYDPLHLAEVLLRTLVLSIGFYTERAFGELEKNSDKQLSNDSQG 982

Query: 747  QETPVSQVVTLL----QSLIITQYVVKHSEICEEV--YQHYLDIVFPHVIDILERSIAWV 800
            Q  P S    LL    + L+   Y+   SE    V   + +L ++ P   + L R+   +
Sbjct: 983  QSDPPSHFHQLLSGLHKHLLAHCYIHSSSEDDSNVLLLREHLYLLLPCASETLRRAGKLL 1042

Query: 801  NQGK-DIEVLNEL---LYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLAILPLLDSLNQ 856
             +   D +++ EL   LYNS+AG +L  +++SLL+    ++ P L + LA+L  ++  N+
Sbjct: 1043 KESSLDKQIIKELHMVLYNSVAGSMLCQVMYSLLLLPLSALQPLLSHLLALLEHINDFNR 1102

Query: 857  LLPMQGNYTE----------TNSFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVH 906
            +LP      E           ++++WL+D+ER+LAL +G+ LG ML GPP + +E  +  
Sbjct: 1103 MLPDTNILEEEELGTEAPKSKSTWVWLLDLERSLALAVGRCLGGMLQGPPTSFQEKTSEF 1162

Query: 907  WLKTSLLSAGLEPSTAIIDIDKFVRDMR 934
            WL   LL  GLE     ++ ++ V  +R
Sbjct: 1163 WLSNILLRNGLE-----MNFEQLVDKIR 1185



 Score =  310 bits (793), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 160/331 (48%), Positives = 209/331 (63%), Gaps = 25/331 (7%)

Query: 1407 VDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNE 1466
            + I   SFD  K +CCT+E  G  L HG G +GYG+    IT GC+ WKF I  E++GNE
Sbjct: 1453 IPIGDFSFDPHKIICCTLE-SGNILSHGMGGKGYGLTTTAITSGCFIWKFSISKENRGNE 1511

Query: 1467 GTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQ 1526
            GTCIGV+RWP+RD+NH TT DMWLYRAYSGN+YH GE    LPSFTQGD IT +LDM+A 
Sbjct: 1512 GTCIGVSRWPVRDHNHHTTTDMWLYRAYSGNLYHGGELIRTLPSFTQGDTITCILDMEAH 1571

Query: 1527 TLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPY 1586
            T+SF KN +EP LAF+ +  ++ LYP VLFYS+N  GEKV + D+ +   P +LL GEP 
Sbjct: 1572 TISFAKNDKEPKLAFEGV-IASELYPCVLFYSSNP-GEKVSLHDLQMRGMPNNLLPGEPL 1629

Query: 1587 CAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVI------KELTAAAEEDNASA 1640
            C+P   ++VES I LLR+LH+ D+W   +NQ +  +L +I       +L+ ++     S 
Sbjct: 1630 CSPRSTVLVESTIQLLRRLHQCDQWAPLINQYIYSQLELIGPLLKEDDLSHSSSGQVRSC 1689

Query: 1641 FVPQ----------ADKG-----RLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCV 1685
            F  +           D+G     R  L +A++  LC EVWP L V+GG D GLR GG C 
Sbjct: 1690 FEKEQREREKDTLDTDRGELYLHRRALSDAKLAALCSEVWPVLAVIGGVDTGLRAGGLCQ 1749

Query: 1686 EKPSGRVGTLLGTLKEGIAKVKDLNFDEIDL 1716
              PSGR   LLG LKEG +  K L ++E +L
Sbjct: 1750 HAPSGRKAVLLGVLKEGSSMAK-LQWEETEL 1779



 Score =  229 bits (585), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/371 (39%), Positives = 203/371 (54%), Gaps = 15/371 (4%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            S VY WG   + Q L       + P L    S  + +  GQ C+FL+ S G +   G+G 
Sbjct: 3020 SDVYLWGNGRYGQ-LAGTGTNLTVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAVGEGQ 3078

Query: 248  ---LGLANTTIQPLPKRV-PLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLG 302
               LG  N+    +P  +   +  +V+  V+ C S+ H + +T  GEV+SWG G+ GKLG
Sbjct: 3079 YGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLG 3138

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            HGN   QRRPK I   L G+ V Q++ G  HSA VT DG L+T+G G+ GRLG     ++
Sbjct: 3139 HGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNK 3197

Query: 363  HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
              P  V  L    VG VSCG +HTLVLS DG  VW+ G G+ GKLG   +     P+ +E
Sbjct: 3198 MLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVE 3257

Query: 421  ALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIV 475
             L    ++KVC G  FSV +  DG V+ +G    +GL  S +   + P +V  L    I 
Sbjct: 3258 QLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIE 3317

Query: 476  DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            D+++G  HVLALS   +VYAWG N+ GQ G  +  NPV +P+ +  L+   ++QI AG  
Sbjct: 3318 DIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGH-CNPVKEPTLITALQGKNIKQISAGRC 3376

Query: 536  FSIAYTVPPSN 546
             S A+T P ++
Sbjct: 3377 HSSAWTTPSTS 3387



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 30  SSSVATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQT-VTSTSP 88
           +S+   S L N VL T+ S++ +LPPLSL+NE ++ S+G+E L QV+ FL++T V S + 
Sbjct: 189 ASAYPESVLCNDVLATACSVLASLPPLSLANENKIPSVGLECLAQVAEFLKRTSVISGAG 248

Query: 89  KADKT 93
            AD T
Sbjct: 249 AADPT 253


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 305/734 (41%), Positives = 433/734 (58%), Gaps = 60/734 (8%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97  SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
            L S + L   L     +L  L E +  A                  Q  +I   C + +
Sbjct: 245 RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVYTMEKNKLLSSQEGMISFDCFMAI 302

Query: 142 I------LVTLADDNIKPLGDRKSSN-----------------SNTDIDSTSTPKLTYNI 178
           +      L + AD +      R S                     +D   T     +   
Sbjct: 303 LMQMRRSLGSSADRSQWREPTRTSEGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
             PKVIEAL+   +RKVCAG+  S+ALT  G V+ WG    LG  SS  +   P L+  L
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
           ++ +IVD+SIGDSH L+LS  NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663 AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
           I AG+  S+A+T  P +  + +   P CVD+   TF+ +R FLE+Y  C +    I   P
Sbjct: 723 ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780

Query: 587 FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
           F S   H  F+ L L+LLS+HL LAL G  ++S+LG +   LR++LF+L+D     EI+ 
Sbjct: 781 FPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840

Query: 647 LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
           ++ + L++GA++LLPP+ E+++LL +LL Q       LS GQRM L +I +SL  +  +A
Sbjct: 841 VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900

Query: 703 HIFYFDQNQDTNIL 716
            +  +    D   L
Sbjct: 901 SLLGYSSPSDAADL 914



 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEG 1867

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 1868 EEGEEEEKKVDSSGEAEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 1927

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 1928 TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 1987

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 1988 DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 2033

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 2034 DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 2092

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 2093 WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 2152

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 2153 EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 2210

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 2211 AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREE 2270

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 2271 KENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 2330

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 2331 TLLGVVKEGSTSAK-VQWDEAEI 2352



 Score =  246 bits (628), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 3997 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 4056 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4115

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 4116 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4174

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 4175 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 4234

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 4235 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 4294

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 4295 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 4353

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 4354 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 4389



 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 28/163 (17%)

Query: 791  DILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRSMYPTL-- 841
            DI  RS   + +    G   E L +++Y S AG +L  IV+SLL   +++ R +   L  
Sbjct: 1028 DIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLD 1087

Query: 842  --------RYFLAILPLLDSLNQLLPMQGNY-----------TETNSFLWLIDMERALAL 882
                       L    LL+      P+ G                 S++WL+D+ER +AL
Sbjct: 1088 LLPPLDCLNRLLPAAALLEDQELQWPLHGGPEVIDPAGVPLPQPAQSWVWLVDLERTIAL 1147

Query: 883  LIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
            LIG+ LG ML G P + EE +T +W+KT L S G+E  T  +D
Sbjct: 1148 LIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 297/852 (34%), Positives = 451/852 (52%), Gaps = 118/852 (13%)

Query: 36  STLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQ 95
           S++ + VL T+L +V  LPPLSL++E+++ S+G++ L Q           +SP  + T  
Sbjct: 192 SSICSDVLQTALDVVIGLPPLSLADESKIPSMGLDCLQQ-----------SSPAVNGTAT 240

Query: 96  SSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLG 155
           +S  + +PL +       A+ L+E+V+  +  Y                           
Sbjct: 241 NSKSNYIPLKE------VAMILMEQVVSLSEEYA-------------------------- 268

Query: 156 DRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQ 215
                     I  T T   + ++ + D       VY WG N  HQ+ +    K   P+  
Sbjct: 269 ----------ISCTETATKSVDMNNCD-------VYAWGSNSSHQLAELGSDKIVFPKKV 311

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLE--AAIVS 270
               N + +EAGQ+CTF +   G +   GKG    LGL ++  Q   K +  +    I  
Sbjct: 312 KSFGNSQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRK 371

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +S SK S+ H L +T+EG ++SWG G++GKLGHG++L+ + PK+I G L  + V  VSAG
Sbjct: 372 ISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAG 431

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
           + HSA VT++G L+TWGEGD+GRLG GD  SR+ P LV +++  G+V CG SHTLVL+QD
Sbjct: 432 YRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSVVCGSSHTLVLAQD 491

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G TVWS G+G+ GKLGH DT +V  PKVIE++      K+CAG+ +S+AL   G VF WG
Sbjct: 492 GLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWG 551

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG  S   +F  P L+  L+  ++VD++ GD H +AL+  NEVY WG+N MGQCG 
Sbjct: 552 CGACLGCGSPDATFMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGL 611

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFT 566
            + ++P+  P++V  L +V + QI AG+  SIAYT  PS+  + S   P CVD+   TF 
Sbjct: 612 GHTNSPISVPTQVQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPYCVDLSESTFK 671

Query: 567 LIREFLEQYSACFETG--DYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNE 624
            +  FL  Y +   T   D  P      H QF+ L LRL+ +HL LA+ G  SS VLG E
Sbjct: 672 KMNNFLSSYCSSLATTALDNPPVSQ---HHQFVYLCLRLVLTHLRLAVTGNLSSFVLGAE 728

Query: 625 TAALRHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTL----LSQDHPL 680
           +  LR++LF L+D +    I  ++ +C+ +GASLLLP + E++ +L +     L +   L
Sbjct: 729 SKVLRNLLFNLMDEDAPESIIEVVKECVTVGASLLLPSIEERISILLSFLPNRLKEVKKL 788

Query: 681 SNGQRMLLGVITSSLHKNEELAHIFYF-DQNQDTN-----------ILMLEDLLKISCRK 728
           S GQRM L V+ SSL  + ++A +  F   N  TN           +L L + +  +  K
Sbjct: 789 SLGQRMQLNVVLSSLQDHAQVAEVLNFRSSNPKTNEHDYSCLAQQLLLTLMENVHCNVMK 848

Query: 729 SYAYTLTHFQSNACKVSPQ--ETPVSQVVTLLQSLIITQYVVKHSEICEEVYQHYLDIVF 786
           S    +    SN  K SP      + QV  LL S++   ++  HS      YQ       
Sbjct: 849 SLQ-DIKSNNSNEVKTSPDYLSEDMVQVFNLLFSMLT--HLFSHS------YQ------- 892

Query: 787 PHVIDILERSIAWVNQGKDIEVLNELLYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLA 846
               ++L +  + +         +++L  S  G++L   ++SLL+      +P L++ + 
Sbjct: 893 --TTEVLPKEFSLIQ--------SDILLRSSCGQLLSLTINSLLLLRLSETFPLLQHLID 942

Query: 847 ILPLLDSLNQLL 858
           +LP +D  N+L+
Sbjct: 943 LLPYIDQFNRLI 954



 Score =  281 bits (719), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 172/508 (33%), Positives = 277/508 (54%), Gaps = 36/508 (7%)

Query: 1216 TLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLE------------------ 1257
            +L+  ++ N+   +A++ + H  D+   +   + + LH  +                   
Sbjct: 1302 SLVTVIARNLFRSIAVSTSLHARDVEADIVGMVANVLHCLISDSFRSLGGSEEICDILHN 1361

Query: 1258 ---TLLPPSDTQGNLEHDVHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYL 1314
               +L PP  T    +H    H  E ++  +L F+  L S  T+CQ  AT PWI +LL +
Sbjct: 1362 NPWSLSPPPRT---YKHLYSQHALESSVGDHLVFVRMLISSHTMCQEFATWPWISTLLNI 1418

Query: 1315 L-SISPSGLCKLNLLRARLLTLNLLTAILPHAQQGELGIITELLTQLSHNMWKVPRTV-- 1371
               +  +GL  +  +R RLL L+LL  +L +    E+ +  +L++Q+   + ++   V  
Sbjct: 1419 AGKLDETGLPVIKSVRTRLLALHLLYTML-NGMSSEVNLSDDLVSQVIDKLLQIIAQVHW 1477

Query: 1372 AHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSL 1431
                A +K++ + KQ +++     +            I   +FD +KCV  ++     +L
Sbjct: 1478 VELPAYEKDDLILKQSDYISTRDETKNEFHQLAAREIISDSAFDVDKCVATSIR-DQFTL 1536

Query: 1432 IHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLY 1491
            +H  G RGYG+    ++ G YQWKF I+ E+ GNEGTCIGV+ +P+ D++HRTT +MWLY
Sbjct: 1537 VHSSGGRGYGMTMARLSMGTYQWKFHILEENPGNEGTCIGVSIFPVEDFSHRTTSEMWLY 1596

Query: 1492 RAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLY 1551
            RAYSGN+YHSGE T  LPS+++GD IT VL M+ +TLSFG NGE P +AF+DLD++A L+
Sbjct: 1597 RAYSGNLYHSGELTHSLPSYSKGDVITCVLCMNERTLSFGINGETPEVAFRDLDSNATLF 1656

Query: 1552 PIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLH--KID 1609
            P V+FYS+N  GE+VKI+D     + ++L  G+P C+ +   + E+ I LL QLH  +  
Sbjct: 1657 PCVMFYSSNF-GEEVKISDFQHIGSGQNLSVGDPICSTMHGTISETCIQLLTQLHSRRES 1715

Query: 1610 RWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADKGRLVLEEAQMELLCREVWPALV 1669
            +W   +   ++ R + + E+     +D+      + D     L++ Q   +   VWPAL 
Sbjct: 1716 QWSMAITDAVIGRFNELPEIL----KDDWLFSSNKQDTPDEDLKDWQRSRMLWRVWPALT 1771

Query: 1670 VMGGGDDGLRMGGKCVEKPSGRVGTLLG 1697
            ++ G D GLRMG +C    S + G LLG
Sbjct: 1772 LLSGVDGGLRMGERCKVINSMKHGILLG 1799


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 302/963 (31%), Positives = 475/963 (49%), Gaps = 148/963 (15%)

Query: 35   TSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTV 94
            +ST  NQ+L+T+L  +  +PPLSL++E +L  L  ++L  V  FL  ++ + S    +  
Sbjct: 206  SSTYWNQLLSTALQTLMLMPPLSLASEPKLPRLAQDTLNSVVEFLTSSLQADSGNTFEGR 265

Query: 95   QSSLRSRVPLTKSLPPYNAALNLLEEVLRPATH-----------YQVDLIRSACL----- 138
            Q ++   + +        A LN ++  L  A                DL     L     
Sbjct: 266  QIAIELLLTIAIQKGSLGAILNWIQLALSLANSPHPLPQDQPMAIHGDLFNRLLLQIEIG 325

Query: 139  -VYLILVTLADDNIKPLG-DRKSSNSNTDIDSTSTPKLTYNIGDTDIS------------ 184
              Y  L+    ++I+ +G +  ++N + +   TST +    I D  I             
Sbjct: 326  NCYRSLLISIYESIESIGVESIAANGSENKSVTSTQQEYIYIEDAAIHLLQEVASLAREH 385

Query: 185  ----------------VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQ 228
                            V  S VY WG N  +Q+        S P    +P    H+    
Sbjct: 386  EGIFRDTVDSSLQTDHVKESHVYVWGSNSSYQL------GISEPEKMLIP----HLTP-- 433

Query: 229  FCTFLLDSTGGLLVYGKGWLGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTS 286
              +F     G    YG+  LGL +++ Q  PK  R   E  I +L  SK S+ H L + S
Sbjct: 434  --SFANSEQGN---YGR--LGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIAS 486

Query: 287  EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
            +G +YSWG G++GKLGHGN ++Q+ PKLI+G + GK V Q++ G+ HSAA+T +GLLYTW
Sbjct: 487  DGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTW 546

Query: 347  GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            G+GD+GRLGHGD  SR  PTLV +++ VG+VSCG S T+V+SQD  TVWS G+G+ GKLG
Sbjct: 547  GDGDYGRLGHGDNHSRSIPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLG 606

Query: 407  HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT 462
            H DT +V  PKVI  L+   +RKVC  +  S+ALT  G VF WG    LG   +  +F  
Sbjct: 607  HGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLV 666

Query: 463  PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            P  +      QI+D+++GD+H LAL+  N+VY+WG+N  GQCG  N ++PV  P KV G 
Sbjct: 667  PKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGF 726

Query: 523  EDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETG 582
            ++  + QI  G+  SIA+T  P++  + +++ P C+D++ +TF+ +   L+++    +T 
Sbjct: 727  DNHVIYQISVGTSHSIAWTALPTDRCIVTSYKPFCIDLKENTFSKLYHLLDRFCTFNDTA 786

Query: 583  DYIPFCSKVTHA---QFILLLLRLLSSHLYLALIGARS-SSVLGNETAALRHVLFKLVDM 638
                  S VTH    Q +   L LL+ HL LA     S +S LG  +  LR ++F+L+D 
Sbjct: 787  S-----SVVTHGQRKQLVCTCLNLLAIHLSLASTDWCSWTSALGQYSQPLRELMFRLID- 840

Query: 639  ETSPEIETLLTDCLAIGASLLLPPVVEQLDLLK--TLLSQDHPLSNGQRMLLGVITSSLH 696
              +PE      + L++GA LLLP + E    +K   +L   +  +N ++ +         
Sbjct: 841  --TPEYFEDAKNVLSVGARLLLPDLPEMAKSMKHEEILEIRNTSTNAEKFI--------- 889

Query: 697  KNEELAHIFYFDQNQDTNILMLEDLLKISCRKSYAYTLTHFQSNACKVSPQETPVSQVVT 756
                   +  F Q  D  ++M + LL + C K    T +  Q   C  +      +   +
Sbjct: 890  --NSAEGLLIFQQMDDLLLIMQKHLLTL-CNKYIGKTHSDQQPKLCLEALNAYVSALTTS 946

Query: 757  LLQSLIITQYVVKHSEICEEVYQHYLDIVFPHVIDILERSIAWVNQGKDIEVLNELLYNS 816
             +  L+  + +V+H  + +++                             EVL  +L NS
Sbjct: 947  TVDILVEAKVIVQHFSVADKIR----------------------------EVLEAVL-NS 977

Query: 817  LAGKILFSIVHSLLI---NIHRSMYP-------TLRYFLAILPLLDSLNQLLP-MQGNYT 865
            + G  L  + HSLL+    I ++  P        L  FL +LP ++S+++ L  +    T
Sbjct: 978  VVGTHLSQVTHSLLLLPPMITKTYLPDLILLVSCLDDFLCLLPGIESVDKELENLSNEKT 1037

Query: 866  ETNS----------FLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSA 915
            ET+           ++WL+D++R    LIG+ +G ML   P  +E+    +W+K++LL  
Sbjct: 1038 ETSDKEFGLEYKEPYVWLLDIQRTCCFLIGRCIGGMLYDMPSCNEDIVN-YWIKSTLLQN 1096

Query: 916  GLE 918
            G E
Sbjct: 1097 GFE 1099



 Score =  249 bits (635), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 249/462 (53%), Gaps = 44/462 (9%)

Query: 1281 NLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYL----LSISPSGLCKLNLLRARLLTLN 1336
            NL+ +L FI  L+  ++    +++  W++SLL +    L  S  G+  +   + RLL++N
Sbjct: 1596 NLSAFLVFIRRLSFSNSFISTISSTKWVKSLLEINNSYLETSGDGVISI---QQRLLSIN 1652

Query: 1337 LLTAILPHAQQGELGIITELLTQLSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPS 1396
            LL   L  A   +  +I +++  L  N   +   ++      +  +  K I       P 
Sbjct: 1653 LLKCTLS-ALTADEHVIRQIIESLFDN---ISDMMSFIQPSTEYSDYSKLIVDYTTDSPM 1708

Query: 1397 GTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKF 1456
                A     + I + +FD +  +CCTVE    +L+H    RGYG+A   I  G  +W F
Sbjct: 1709 NLDPA-----IPIKA-NFDPDLTICCTVE-NLTTLVHSVNGRGYGIAASSIKSGTRRWNF 1761

Query: 1457 LIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGE-QTTMLPSFTQGD 1515
             +  + + ++G CIG+TR+PI DYN+RTT DMWLYRA +G++YH GE  ++  PS+  GD
Sbjct: 1762 YVTQDTRNSDGVCIGMTRYPITDYNYRTTSDMWLYRACNGSLYHGGELPSSTFPSYAGGD 1821

Query: 1516 YITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCE 1575
            YITV++DM +  ++FGKN EEP +AF+++D    L P+++F   N+ GE++ + DM +  
Sbjct: 1822 YITVIVDMQSCNIAFGKNDEEPMIAFENIDRQE-LLPVIVF-GNNSPGERISLLDMRIDG 1879

Query: 1576 TPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEE 1635
             P DL+ G+P CAP  ++  ++ + L+R+LH+   WK  +N+ +++RL++   +  A  +
Sbjct: 1880 PPIDLIAGDPLCAPSHVISAQALVELIRELHENKNWKTIINETIINRLTINDNVLIANND 1939

Query: 1636 D----NASAFVPQADKGRLV----------LEEAQ--------MELLCREVWPALVVMGG 1673
            +      S   P       +          LEE Q        +  LCR  WPAL V+GG
Sbjct: 1940 EADGVTYSHIFPHHQISDSIVYSVAFNVDSLEEHQDPDYPKLCLHTLCRLAWPALAVLGG 1999

Query: 1674 GDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEID 1715
             D G R+G  C  +PS R+ TLLG +K   +K+  + +++ D
Sbjct: 2000 IDCGYRVGSTCQHQPSSRIVTLLG-MKRSYSKLVTVLWNDTD 2040



 Score =  230 bits (586), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 202/374 (54%), Gaps = 16/374 (4%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
            A  + YTWG   H Q+ +  R    +P L S  S  + I  G   TF+++  G +L  G+
Sbjct: 3405 AKCEAYTWGGGRHGQLAESGR-LVLQPTLTSSFSKAKQIHCGHNSTFVIEHDGTVLACGE 3463

Query: 246  GWLG-LANTTIQPLPKRVPLEA----AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G  G L       LP+  P+ A     +  L+ S   E H L +T  GEV+SWG G++GK
Sbjct: 3464 GSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGK 3523

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN+  QRRP+ I   L G+ V  V+ GH HSA VT DG L+T+G  D GRLG G+  
Sbjct: 3524 LGHGNSERQRRPRQIEA-LRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTS 3582

Query: 361  SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            ++  P  VT L    V  ++CG +HT+V++ D  +VW+ G G  G+LG   T    TP+ 
Sbjct: 3583 NKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQY 3642

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSH 472
            ++A  K  ++K+C G  F++ALT +G V+  G    +      T      P  V  LS  
Sbjct: 3643 VDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQ 3702

Query: 473  QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
             I D++ G  H LAL++  +V++WG++T GQ G    + P  +P  +  L+   +RQI A
Sbjct: 3703 FIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQ-TLPQREPCLISSLQGKGIRQISA 3761

Query: 533  GSLFSIAYTVPPSN 546
            G   S A+TV P++
Sbjct: 3762 GHNHSAAWTVAPAS 3775


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 315/563 (55%), Gaps = 79/563 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 456  STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLFMASFGEG 515

Query: 1264 ----------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPW 1307
                      D+ G  E           H  E +L  +L F+  + S   +   +A+  W
Sbjct: 516  EEGEEEDKKVDSSGEAEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKW 575

Query: 1308 IQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLS 1361
             + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + LS
Sbjct: 576  TEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLS 635

Query: 1362 HNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSF 1414
              MW+ P   A H    KE+E + +++              +QG ++       I  VSF
Sbjct: 636  DCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSF 681

Query: 1415 DKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTR 1474
            D EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+R
Sbjct: 682  DPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSR 740

Query: 1475 WPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNG 1534
            WP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNG
Sbjct: 741  WPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNG 800

Query: 1535 EEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILM 1594
            EEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++
Sbjct: 801  EEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVL 858

Query: 1595 VESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK------- 1647
             E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +       
Sbjct: 859  AEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIRESGQKLKKSRSVQSREENEMREE 918

Query: 1648 --------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVG 1693
                          G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  
Sbjct: 919  KENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHA 978

Query: 1694 TLLGTLKEGIAKVKDLNFDEIDL 1716
            TLLG +KEG    K + +DE ++
Sbjct: 979  TLLGVVKEGSTSAK-VQWDEAEI 1000



 Score =  246 bits (629), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 2645 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 2703

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 2704 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 2763

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 2764 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2822

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 2823 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 2882

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 2883 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 2942

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 2943 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 3001

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 3002 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 3037


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 261  STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 320

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+ G  E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 321  EQEEGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 380

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        I+  L + 
Sbjct: 381  KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 440

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 441  LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 486

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 487  SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 545

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 546  SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 605

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  
Sbjct: 606  NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 663

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 664  VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 723

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 724  EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 783

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 784  HATLLGVVKEGSTSAK-VQWDEAEI 807



 Score =  251 bits (641), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 2452 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 2510

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 2511 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 2570

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 2571 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2629

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 2630 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 2689

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 2690 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDV 2749

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 2750 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 2808

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 2809 AAWTAPPVPPRAPGVSVPLQLGLPDTLPPQYGALRE 2844


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  388 bits (997), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/607 (38%), Positives = 339/607 (55%), Gaps = 77/607 (12%)

Query: 40  NQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKT------ 93
           N ++ T+LS+V N PPLSLSNET+L+ LG++SL Q++ FL+Q  +  S +AD T      
Sbjct: 210 NDIIQTALSVVENFPPLSLSNETKLTPLGVDSLNQINVFLQQAASPHS-EADLTGQRLAA 268

Query: 94  -------------------VQSSLRSRVPLTKS----------------------LPPYN 112
                              ++ S++  V ++KS                      + P  
Sbjct: 269 ELMIALAAQRGSLRYVLGWIEMSMKISVTVSKSKTKDKDAGKIHWQSFLKIITDMINPMG 328

Query: 113 AALNLLEEVLR---PATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDST 169
            +  L   +LR   P  +  V L  +A ++   L  LA D           N N   +ST
Sbjct: 329 GSSGLTSTMLRDISPDDNGLVSLYYAAVILLEELYFLASDYASNCCSGPDENCN---NST 385

Query: 170 STPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQF 229
           S         + ++S +  +VY WG N  HQ+ +  + K + P+  ++ ++ + +EAGQF
Sbjct: 386 SHS-------NANLSGSCGEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQQVEAGQF 438

Query: 230 CTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVT 285
           CTFL+ S G +   GKG    LGL ++    +PK+   +   V  +S SK S+ H L +T
Sbjct: 439 CTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALT 498

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           + GEVYSWG G++GKLGHG   +Q+ PKL+ G L GK V  VSAG+ HSAAVTEDG LYT
Sbjct: 499 TTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYT 558

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG+G+ GRLGH    S++ PT V  +  VG V+CG SHTL +SQDG T+WS G G  GKL
Sbjct: 559 WGDGEFGRLGHDYTSSKNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKL 618

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFH 461
           GH DT +   PKVIEAL    +RKV  G+  S+A+T  G ++ WG    LG  S+  +  
Sbjct: 619 GHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYTAL 678

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            P LV  L S ++VD++ GDSHV+AL+  +EVYAWG+N MGQCGQ +  +P+ +P +V+G
Sbjct: 679 RPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVIG 738

Query: 522 LEDVCVRQICAGSLFSIAYTVPPSNS--------ALSSAFTPLCVDVRPHTFTLIREFLE 573
           L+ V V Q+ AG+  S+A+T  P++          + +   P CVD++  TF  IR FLE
Sbjct: 739 LDGVSVHQVSAGTSHSVAWTALPTDRYEMVLVMLPVIAWPRPFCVDLQEATFATIRTFLE 798

Query: 574 QYSACFE 580
            +   F+
Sbjct: 799 TFCCGFD 805


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 225/565 (39%), Positives = 313/565 (55%), Gaps = 81/565 (14%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
            +T L+  S+ ++ ILAI    + + L+  V   L   L   L+ LL  +           
Sbjct: 430  STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLLMASFGEG 489

Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
                        D+    E           H  E +L  +L F+  + S   +   +A+ 
Sbjct: 490  EGEEGEEEEKKVDSSEETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 549

Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
             W + LL + S    SG+  +  LR RLL L++L A+LP  + G        ++  L + 
Sbjct: 550  KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSL 609

Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
            LS  MW+ P   A H    KE+E + +++              +QG ++       I  V
Sbjct: 610  LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 655

Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
            SFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 656  SFDPEKAQCCLVE-NGQVLTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 714

Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
            +RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 715  SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 774

Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
            NGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI +M +  TPRDLL G+P C+PV  
Sbjct: 775  NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICEMQMRGTPRDLLPGDPICSPVAA 832

Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
            ++ E+   L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ +     
Sbjct: 833  VLAEATTQLIRILHRTDRWTYSINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMK 892

Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
                            G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 893  EEKENKEEEKGKHNRHGLADLSEPQLRTLCTEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 952

Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
              TLLG +KEG    K + +DE ++
Sbjct: 953  HATLLGVVKEGSTSAK-VQWDEAEI 976



 Score =  239 bits (609), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/403 (37%), Positives = 220/403 (54%), Gaps = 25/403 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            V+ WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 2624 VFLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 2682

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 2683 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 2742

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 2743 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 2801

Query: 365  PTLVTELS--DVG-------AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            P  VT L    +G       +V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++
Sbjct: 2802 PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSS 2861

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLS 470
            P+ ++ L    ++KV  GT FSVALT DG V+ +G    +GL       H  P  V  L+
Sbjct: 2862 PQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLA 2921

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
               I DV++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI
Sbjct: 2922 GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQI 2980

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             AG   S A+T PP          PL +   D  P  +  +RE
Sbjct: 2981 SAGRCHSAAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 3023



 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 29/297 (9%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            ++  I+S + S+  + H+     + +V+ WG G HG+L        R   +        +
Sbjct: 2601 MDEQIMSWATSRPEDWHL---GGKCDVFLWGAGRHGQLAEAG----RNVMVPAAAPSFSQ 2653

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSC 379
              QV  G + +  +  +G +   GEG +GRLG G+    H  T+++ L          SC
Sbjct: 2654 AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSC 2713

Query: 380  G-ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
            G + H++ L++ G  V+S G G+ GKLGH ++ +   P+ IEAL+   V ++  G   S 
Sbjct: 2714 GSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSA 2772

Query: 439  ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI-------VDVSIGDSHVL 485
             +T DG +F +G      LGL ++S +   P  VT L  +QI         V+ G +H L
Sbjct: 2773 VVTSDGKLFTFGNGDYGRLGLGNTS-NKKLPERVTALEGYQIGQAWNKSYSVACGLNHTL 2831

Query: 486  ALSQYNE-VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            A+S     V+A+G    G+ G  N S     P KV  L  + ++++  G+ FS+A T
Sbjct: 2832 AVSTDGSMVWAFGDGDYGKLGLGN-STAKSSPQKVDVLCGIGIKKVACGTQFSVALT 2887


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Hydra magnipapillata]
          Length = 1679

 Score =  378 bits (971), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 292/972 (30%), Positives = 455/972 (46%), Gaps = 93/972 (9%)

Query: 30   SSSVATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPK 89
            SS V    L  +VL +   ++  +PPLSL N+     +  + L ++  F+ Q + S    
Sbjct: 169  SSDVHMRLLCEEVLCSCSDMIMTVPPLSLLNDNNFPKVARDCLDEIMLFMLQLMKSKDST 228

Query: 90   ADKTVQSSLRSRVPLTKSL--PPYNAALNLLEEVLRPATH-YQVDLIRSACLVYLI---- 142
               +V  +  S + L  S+        L  +++ +  A +   +  I +   +Y      
Sbjct: 229  DVDSVLQTFASEIFLGLSMLRGSLTHLLVWVDKCIENAINGSMLGKISTKKFIYWFNQIC 288

Query: 143  -----------LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVY 191
                        + L D  I  LG+     +        +P         D S    + Y
Sbjct: 289  DEKLELQNSEEFLALNDAAILLLGNVSKKANLLTHQHLGSP--------NDSSSLKHEAY 340

Query: 192  TWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WL 248
             WG N  HQ+++  + K   P+      N   +EAGQ+CTF L   G L   GKG    L
Sbjct: 341  AWGSNSSHQLVEGNKDKILTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGKL 400

Query: 249  GLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            GL +++  Q L K       I  +S SK S++H L +T  G VYSWG GE GKLGHGN  
Sbjct: 401  GLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVA 460

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +Q+ PK+I G    + +T +SAG  HSAA+T+DG LYTWGEG+HGRLGHGD   +  PTL
Sbjct: 461  TQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTL 520

Query: 368  VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
            V  +     V+ G SHT+VLS+D  TVW+ G+G+ GKLGH +T     PK+++AL+  R+
Sbjct: 521  VRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRI 580

Query: 428  RKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
            +K+ AGT  S+ALTW G ++ WG    LG+ ++      P +V  L    IVD+S+GD H
Sbjct: 581  KKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHLLPKIVESLRDVHIVDISLGDCH 640

Query: 484  VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP 543
             LALS  +EVY+WG+N MGQCG  +   PV  P+KV+ L+ + + QI  G+  S A+T P
Sbjct: 641  CLALSADHEVYSWGNNNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSFAWTTP 700

Query: 544  PSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRL 603
            P       +  P C+ +   TF  +    E+Y       + +P    +    F+  ++ L
Sbjct: 701  PLKKKYLVSNKPYCLSLDKETFIKLYLLTEKYVKNKSKFESLPNNGTIN---FLESIIDL 757

Query: 604  LSSHLYLAL-IGARSSSVLGNETAALRHVLFKLVDMETSP-EIETLLTDCLAIGASLLLP 661
            L+ H  LA+   A  +  L +       +L +LVD +  P  I   ++D + +GA   L 
Sbjct: 758  LNCHFQLAVKYSALQNDFLEDIRKPFLEILLQLVDEKDFPCAILKKVSDVVFVGAVYFLS 817

Query: 662  PVVEQLDLLKTLLS---QDHPLSNGQRMLLGVITSSLHKNEELAHIFYFDQNQDTNILML 718
             + +  ++  TLLS   QD+ L+  + +L+ ++ +SL  ++ +  +F F +  D   L++
Sbjct: 818  NLEDCTEMALTLLSEIIQDNFLAPAKLLLVRIVLNSLCDHKVITQLFGFYEIHDIKELLV 877

Query: 719  E--DLLKISCRK------------SYAYTLTHFQSNACKVSPQETPVSQVVTLLQSL--- 761
               ++ K   +K              +  L+  Q   C   P    + Q+  + + L   
Sbjct: 878  NQPNIEKEKEKKFLTLQKLLNLLIQCSTNLSKKQFELCSSLPDNVCLQQICEIQELLLKL 937

Query: 762  -------IITQYVVK-----HSEICEEVYQHYLDIVFPHVIDILERSIAWVNQGKDIEVL 809
                   I    V K     H    E +   Y+ ++  HV + L  +I      KD +  
Sbjct: 938  LQLLQLHIFASVVNKGAPNIHVIPFETILMDYMAVLSQHVCNTLTYAIQL---EKDHQ-- 992

Query: 810  NELLYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLAILPLLDSLNQLLPMQGNYTE--- 866
               L NS+ G IL   VHS LI + +  +     F A++ +  +LN++      Y     
Sbjct: 993  QSYLDNSVVGPILLCFVHS-LITVSQYNFSRFFKFDAMMNIFCALNKINQGSREYISLKE 1051

Query: 867  -------------TNSFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLL 913
                         T    WL+D + +L +LIG  +   L G  E +EE      L +SLL
Sbjct: 1052 KKIKTDFVSLNHITQESSWLLDTQVSLGILIGCVINVGLAGNKETNEEVCCKTLLTSSLL 1111

Query: 914  SAGLEPSTAIID 925
              GLE    + D
Sbjct: 1112 CNGLEEREKLKD 1123


>gi|349605085|gb|AEQ00440.1| putative E3 ubiquitin-protein ligase HERC1-like protein, partial
            [Equus caballus]
          Length = 541

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/430 (46%), Positives = 267/430 (62%), Gaps = 51/430 (11%)

Query: 1320 SGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQLSHNMWKVPRTVAHH 1374
            SG+  +  LR RLL L++L A+LP  + G        ++  L + LS  MW+ P   A H
Sbjct: 10   SGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSDCMWETPIAQAKH 69

Query: 1375 NALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSVSFDKEKCVCCTVECG 1427
                KE+E + +++              +QG ++       I  VSFD EK  CC VE  
Sbjct: 70   AIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEVSFDPEKAQCCLVE-N 114

Query: 1428 GQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGD 1487
            GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV+RWP+ D+NHRTT D
Sbjct: 115  GQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSD 174

Query: 1488 MWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTS 1547
            MWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+SFGKNGEEP LAF+D+D +
Sbjct: 175  MWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVD-A 233

Query: 1548 APLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHK 1607
            A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+PV  ++ E+ I L+R LH+
Sbjct: 234  AELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAAVLAEATIQLIRILHR 292

Query: 1608 IDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK-------------------- 1647
             DRW   +N+ +++RL  IK     + +    +   Q+ +                    
Sbjct: 293  TDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMREEKESKEEEKGKHNR 352

Query: 1648 -GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKV 1706
             G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K +GR  TLLG +KEG    
Sbjct: 353  HGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGRHATLLGVVKEGSTSA 412

Query: 1707 KDLNFDEIDL 1716
            K + +DE ++
Sbjct: 413  K-VQWDEAEI 421


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  353 bits (907), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 235/584 (40%), Positives = 331/584 (56%), Gaps = 58/584 (9%)

Query: 1183 YDPVADIGLA--SSLIKLLEYSNKHVPT--HPHA---NGNT----LLREVSSNMIHILAI 1231
            Y PV D+ LA  S L+ LL       PT  HPH     G +    +L+  S  ++ ILA+
Sbjct: 742  YQPV-DVSLAVSSGLLPLLSRLCGTSPTLSHPHQLILGGTSQLSLVLQVASLRLLQILAV 800

Query: 1232 ACANHIEDLNESVRSKLTSCLHVYLETLLPPSDTQ---GNLEHDVHNHTEERN------- 1281
                + + L+ SV S +   L   +  LL  +  Q   G  E +       R        
Sbjct: 801  TTGTYADKLSGSVVSAMVDLLCSQMSALLEAAGGQTVTGTKEEEDKPKLSTRQMKLAETA 860

Query: 1282 LAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLL-SISPSGLCKLNL---LRARLLTLNL 1337
            L  +L F+  + S  +V   +A++PW   LL +  S    G   L L   LR RLL L+L
Sbjct: 861  LGDFLVFLRRVASSRSVQLKMASRPWTNLLLTIAGSGQEEGTSALPLVSNLRTRLLALHL 920

Query: 1338 LTAILPHAQQGELG-----IITELLTQLSHNMWKVPRTVAHHNALKKEEELDKQI-EHLY 1391
            L A+LP       G     +  +L + LS +MW+ P   +      KEEE+DK++ +H  
Sbjct: 921  LEAVLPACSPATDGQHIRQVCDQLFSLLSTSMWETPLAASRQALRLKEEEIDKKLLKHQN 980

Query: 1392 CPPPSGTSNAS-RQGYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRG 1450
              P +G+ +A   +  + +   +FD E+ VCCTVE  G +L+HG G RGYG+ + GI+ G
Sbjct: 981  --PDAGSPDACWEEENMAVQEANFDPERTVCCTVE-NGHTLVHGAGGRGYGLGSTGISSG 1037

Query: 1451 CYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPS 1510
            C+QWKFLI+ E++GNEGTC+GV+++P++D++HRTT DMWLYRAYSGN+YH+GEQ+  LPS
Sbjct: 1038 CWQWKFLIIKENRGNEGTCVGVSKFPVQDFSHRTTADMWLYRAYSGNLYHNGEQSLALPS 1097

Query: 1511 FTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITD 1570
            FTQGDYITVVLDM+A+T+SFGKNGEEP LAF+D+D S  L+P+V+FYS+N  GEKVKITD
Sbjct: 1098 FTQGDYITVVLDMEARTVSFGKNGEEPRLAFEDVD-STELFPVVMFYSSNP-GEKVKITD 1155

Query: 1571 MTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIK--- 1627
            M V   PRDLL G+P CAP P +  E+ + L+R LH+ + W AH+N C++DRL  IK   
Sbjct: 1156 MQVRGAPRDLLPGDPTCAPAPAVTSEAAVQLIRTLHRQEGWTAHINSCIMDRLGNIKRLY 1215

Query: 1628 ELTAAAE-EDNASAFVPQADKGRLVLEEAQMELLCRE--------VWPALVVMGGGDDGL 1678
            E+T   E E   S  V + DK +   E+   +   +E                  G++G+
Sbjct: 1216 EMTLMQETETGTSKTVTKTDKSKPAEEDTTDDDKTKEEALSSDQKEEEEKAEPEDGEEGI 1275

Query: 1679 R--MGGKCVEKPSGRV-----GTLLGTLKEGIAKVKDLNFDEID 1715
                 GK   +  G        TLLG +KEG A  K + +D+ D
Sbjct: 1276 AEDTAGKDETEKEGESSKAEEATLLGMVKEGSASAK-VQWDDAD 1318



 Score =  233 bits (593), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/354 (40%), Positives = 203/354 (57%), Gaps = 15/354 (4%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-- 246
            + Y WG   H Q+ +  R   + P +    S  + I  GQ CTF++ + G +   G+G  
Sbjct: 3184 EAYMWGGGRHGQLAETGRSLLT-PTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSY 3242

Query: 247  -WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGH
Sbjct: 3243 GRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3302

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN+  QRRP+ I   L G+ + Q++ G  HSA V+ DG L+T+G GD+GRLG G+  ++ 
Sbjct: 3303 GNSDRQRRPRQIEA-LQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKK 3361

Query: 364  TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
             P  VT L    VG V CG +HTL +S DG+TVWS G G+ GKLG  ++   +TP+ ++ 
Sbjct: 3362 IPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDP 3421

Query: 422  LRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGL-RSSSISFHTPVLVTGLSSHQIVD 476
            L    V+KVC GT FSVALT DG VF +G    +G   S S + + P  V  L +  + D
Sbjct: 3422 LCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVED 3481

Query: 477  VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            V +G  H LAL+   EV+AWGSN  GQ G  + +N   +P  V  L+   VRQ+
Sbjct: 3482 VVVGAEHSLALTSTGEVWAWGSNGDGQLGIGD-TNARREPCLVTALQGKNVRQV 3534



 Score = 98.2 bits (243), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 30/168 (17%)

Query: 781 YLDIVFPHVIDILERSIAWVN----QGKDI--EVLNELLYNSLAGKILFSIVHSLLINIH 834
           +L ++ PH  ++L RS   +     QG+    + L ++LY S AG +L  +VHSLL+   
Sbjct: 64  HLSLMLPHAGEVLSRSAQLLQDSAAQGQSAVRDRLGDVLYKSAAGSMLSQMVHSLLLLPV 123

Query: 835 RSMYPTLRYFLAILPLLDSLNQLLPMQGNYTE------------------------TNSF 870
             + P L + LA+LP LDSLN+LLP      +                        + S+
Sbjct: 124 TIVRPILAHLLALLPYLDSLNRLLPAAAVLEDQELEWPLHATPESIDPSAVPMAQPSKSW 183

Query: 871 LWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLE 918
           +WL+D+ERA+ LL+G+ LG ML+G P + +E ET  W+ + L  +GLE
Sbjct: 184 VWLVDLERAVGLLVGRCLGGMLVGMPPSTDEKETCGWISSPLFCSGLE 231



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 51/298 (17%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPR-LQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKG 246
            +V++WG   + ++      +  RPR +++L    I  +  G   + ++ + G L  +G G
Sbjct: 3288 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNG 3347

Query: 247  ---WLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGE-VYSWGVGEHGKL 301
                LGL NT+ + +P+RV  LE  +V      C   H L V+++G  V+S+G G++GKL
Sbjct: 3348 DYGRLGLGNTSNKKIPERVTALEGQMVG--QVGCGLNHTLAVSADGNTVWSFGDGDYGKL 3405

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G GN+ ++  P+ +   L G  V +V  G   S A+T+DG ++T+G+     +G  + +S
Sbjct: 3406 GLGNSTAKSTPQRV-DPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQ--ERLIGQPESRS 3462

Query: 362  RH--TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
            R+   P  V  L    V  V  G  H+L L+  G  VW+ GS   G+LG  DT     P 
Sbjct: 3463 RNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGE-VWAWGSNGDGQLGIGDTNARREPC 3521

Query: 418  VIEALRKFRVRKV----------------------------------CAGTSFSVALT 441
            ++ AL+   VR+V                                   AG + S   T
Sbjct: 3522 LVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISAGRNHSGGWT 3579


>gi|26350557|dbj|BAC38918.1| unnamed protein product [Mus musculus]
          Length = 367

 Score =  347 bits (891), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 175/333 (52%), Positives = 224/333 (67%), Gaps = 25/333 (7%)

Query: 1409 IDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGT 1468
            I  VSFD EK  CC VE  GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGT
Sbjct: 11   IQEVSFDPEKAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGT 69

Query: 1469 CIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTL 1528
            C+GV+RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD+IT VLDM+A+T+
Sbjct: 70   CVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTI 129

Query: 1529 SFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCA 1588
            SFGKNGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL G+P C+
Sbjct: 130  SFGKNGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICS 187

Query: 1589 PVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK- 1647
            PV  ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +   Q+ + 
Sbjct: 188  PVAAVLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREE 247

Query: 1648 --------------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEK 1687
                                G   L E Q+  LC EVWP L V+GG D GLR+GG+CV K
Sbjct: 248  NEMREEKENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHK 307

Query: 1688 PSGRVGTLLGTLKEGIAKVKDLNFDEIDLPRDY 1720
             +GR  TLLG +KEG    K + +DE ++   Y
Sbjct: 308  QTGRHATLLGVVKEGSTSAK-VQWDEAEITIRY 339


>gi|443704115|gb|ELU01327.1| hypothetical protein CAPTEDRAFT_215878, partial [Capitella teleta]
          Length = 2094

 Score =  340 bits (871), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 201/504 (39%), Positives = 283/504 (56%), Gaps = 37/504 (7%)

Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPSDTQGNLEHDVH 1274
            +TLL   S+  +HILA++     +DL+ SV   +   L    + L+           D  
Sbjct: 934  DTLLTVASARALHILAVSVGWLADDLSPSVLQSVLDVLWGQADVLMESLGAGVESGRD-- 991

Query: 1275 NHTEERNLAYYLSFIYSLTSVSTVCQLLATQP-WIQSLLYLLSISPSGLCKLNLLRARLL 1333
              T E  L   LS I  +     + +++A+ P W   LL ++    SG   +   R RLL
Sbjct: 992  --TIENYLGDLLSLIRRIAGTLPMKRMMASSPKWTTLLLKVIGYHRSGAPIVGDTRTRLL 1049

Query: 1334 TLNLLTAILPHAQQGE----LGIITELLTQLSHNMWKVPRTVAHHNALKKEEELDKQIEH 1389
             ++ + ++LP   +        ++  LL  LS  MW  P  +A  NA  + + L  +IE 
Sbjct: 1050 GIHFMESVLPFCSEANPLHLKEVVGTLLDSLSAAMWSAPIAMATSNAHSEIKNLQTRIEE 1109

Query: 1390 LYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITR 1449
            L          A     + +  ++FD  +  CC++E  G +L HG G RGYG+  + ++ 
Sbjct: 1110 LSSTAEETADAAETPENLVMSDMNFDPGRMFCCSIE-QGHTLAHGAGGRGYGLCAMAVSS 1168

Query: 1450 GCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLP 1509
            GCYQWKFLIV E+KGNEGTC+GV++WP++D++HRTT DMWLYRAYSGN+YH+GEQ+  LP
Sbjct: 1169 GCYQWKFLIVKENKGNEGTCVGVSKWPLKDFSHRTTSDMWLYRAYSGNLYHNGEQSLTLP 1228

Query: 1510 SFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKIT 1569
             FTQGDYIT +LDM A+T+SFGKNGEEP +AF+D+D    L+P V+FYS+N  GEKVKIT
Sbjct: 1229 GFTQGDYITCILDMHAKTISFGKNGEEPKVAFEDVD-GPELFPCVMFYSSNP-GEKVKIT 1286

Query: 1570 DMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKEL 1629
            DM V   P  LL G+P+CAP   +  E+  +LLR LH    W + VN+ LL RL     L
Sbjct: 1287 DMMVKGGPPPLLPGDPHCAPFHAVKSEALCNLLRLLHSQKAWNSVVNEALLSRLQPAGRL 1346

Query: 1630 TAA-AEEDNASAFVPQADKGRLVLEEAQME-----------------------LLCREVW 1665
                +   + S   P+     + + +AQME                       ++C+E+W
Sbjct: 1347 ADRLSVSPDRSPEEPKDPDAEMSI-DAQMEQEENLQKQIKKDVGSDFSALSTQIICKEIW 1405

Query: 1666 PALVVMGGGDDGLRMGGKCVEKPS 1689
            PALVVMGG D GLRMGG+CV+K S
Sbjct: 1406 PALVVMGGVDRGLRMGGRCVKKQS 1429



 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/518 (34%), Positives = 272/518 (52%), Gaps = 74/518 (14%)

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
           NEVYAWG+N MGQCGQ +  +PV +P KV+GL+ V V QI AG+  S+A+T  P +  + 
Sbjct: 1   NEVYAWGNNAMGQCGQGHSQSPVTRPKKVMGLDGVLVHQISAGTSHSLAWTAVPRDRQVV 60

Query: 551 SAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI-PFCSKVTHAQFILLLLRLLSSHLY 609
           S   P CVD++  TF+L+R FLE+Y   F++   + PF SK     F+LL LRLL +HL 
Sbjct: 61  SWHRPFCVDLQESTFSLLRSFLERYCDGFDSDQPVSPFPSKEEQEHFVLLCLRLLITHLL 120

Query: 610 LALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDL 669
           LAL G  S+S+LG++   LR++LF+++DMET   ++  + + L+IGA LLLPP+ E+++L
Sbjct: 121 LALAGDVSTSLLGSQAKLLRNLLFRMMDMETPLSVQEAVNESLSIGAPLLLPPLAERMEL 180

Query: 670 LKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELAHIFYF---------DQNQDTNIL 716
           L TLL Q       LS GQR  + +I +SL  N  +A +  F           NQ   IL
Sbjct: 181 LHTLLPQGPTCWGSLSRGQRQQVTIILNSLRDNSHVASVLGFTSGGGESVAPDNQLAGIL 240

Query: 717 M---LEDL----------LKISCRKSYAYTLTHFQSNACKVSPQETPVSQVVTLLQSL-- 761
           M   L++L          L  +  KS       F+ +        +P   +  LL SL  
Sbjct: 241 MKTLLKNLGFHVEQCFNALSRNAEKSAEDCFGEFEGSV-------SPPGHLRELLASLHK 293

Query: 762 -IITQYVVKHSEICEE-------VYQHYLDIVFPHVIDILERSIAWVNQGKD---IEVLN 810
            ++   +   +++ +E       ++QH L ++FP   DI+ER+I  +   K    ++++N
Sbjct: 294 HLLAHCLAHSADVSQELQGAICLLHQH-LSLMFPLCGDIIERTIQLLQGQKSDNMLKIMN 352

Query: 811 ELLYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLAILPLLDSLNQLLP---------MQ 861
           ++L    AG +L S++ +LL+     + P L   L++L  LD LN+LLP         M+
Sbjct: 353 DILLPCPAGCMLSSLLTALLLLPVHCIRPLLHELLSLLTKLDVLNRLLPAADVLEKQEME 412

Query: 862 GNYTETNS---------------FLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVH 906
                T S               ++WL+DMER  +LLIG+ LG M+ GP  +  E  T  
Sbjct: 413 WPLHATPSSLDVGKIPLPEKVTRWVWLVDMERTCSLLIGRCLGGMVYGPAPSPSEKITEV 472

Query: 907 WLKTSLLSAGLEPSTAIIDIDKFVRDMRHVSNNILMSP 944
            L   +   GL  S  I DI++ +  +   S   + SP
Sbjct: 473 TLTGPVFGNGLLAS--IADIERVLAAVDVWSTQQMQSP 508



 Score = 45.1 bits (105), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 5/62 (8%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHS---AAVTEDGLLY 344
           EVY+WG    G+ G G++ S   RPK +MG L G  V Q+SAG SHS    AV  D  + 
Sbjct: 2   EVYAWGNNAMGQCGQGHSQSPVTRPKKVMG-LDGVLVHQISAGTSHSLAWTAVPRDRQVV 60

Query: 345 TW 346
           +W
Sbjct: 61  SW 62


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  320 bits (820), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 203/535 (37%), Positives = 291/535 (54%), Gaps = 79/535 (14%)

Query: 166 IDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE 225
           ID +ST +      + ++   +S+VY WG N  HQ+ +  + K  +P+L    +N + IE
Sbjct: 361 IDDSSTGE------NGNMVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANAQTIE 414

Query: 226 AGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLE--AAIVSLSVSKCSEAH 280
           AGQ+CTF++ S G +   GKG    LGL ++  Q   K++  +    I  +S SK S+ H
Sbjct: 415 AGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGH 474

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
            L +T++GEV+SWG G++GKLGHGN+ +Q+ PK I G L GK V  +SAG+ HSAAVTED
Sbjct: 475 TLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTED 534

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           G L+TWGEGD+GRLGHGD   +                                  +G G
Sbjct: 535 GELFTWGEGDYGRLGHGDSNRK----------------------------------LGHG 560

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSS 456
                   DT +V  PKVIEAL    +RKVC G+  S+ALT  G +F WG    LG  S 
Sbjct: 561 --------DTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGSP 612

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             +   P LV  L++ +IVDV+ GDSH LAL+  NEVYAWG+N MGQCGQ +  +P+ +P
Sbjct: 613 ESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKP 672

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYS 576
            KVVGL+ V V QI AG+  S+A+T  P++  + +   P CVD++  TFT +R FLE+Y 
Sbjct: 673 KKVVGLDGVTVHQISAGTSHSLAWTALPTDRQVVAWHRPFCVDLQESTFTHLRMFLERYC 732

Query: 577 ACFETGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLV 636
             F++                       +S L+  L  A S ++       L  +  ++ 
Sbjct: 733 DGFDS---------------PNPPPPFPTSKLFHDLFQAVSETLSVGAPLLLPPLRERME 777

Query: 637 DMETSPEIET---LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQ 684
            ++    + T   +  + L++GA LLLPP+ E+++LL  LL Q       LS GQ
Sbjct: 778 LLQQLELLNTSYHIYVETLSVGAPLLLPPLRERMELLHQLLPQGPARWESLSKGQ 832



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%)

Query: 23  LENIILRSSSVATSTLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQT 82
           L    L+S      +L N V+ T++ +V +LPPLSL+NET++  +G++ L QV+ FL+  
Sbjct: 172 LRQSWLQSPPGGNLSLCNDVIQTAMDVVSSLPPLSLANETKMPPMGLDCLKQVTEFLKSV 231

Query: 83  VTSTS 87
              TS
Sbjct: 232 TMPTS 236


>gi|390358768|ref|XP_796864.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Strongylocentrotus purpuratus]
          Length = 4631

 Score =  313 bits (802), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 177/405 (43%), Positives = 243/405 (60%), Gaps = 50/405 (12%)

Query: 1271 HDVHNHTEE---RNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLLSISP-SGLCKLN 1326
            H V   T +     L  +L F+  ++S   V   +A   W   LL ++   P SGL ++ 
Sbjct: 1260 HKVGKRTRQAAQNALGDFLVFLRRVSSCGVVQSKMAESRWTDILLAIVGHHPQSGLPRIE 1319

Query: 1327 LLRARLLTLNLLTAILPHAQQGELG----IITELLTQLSHNMWKVPRTVAHHNALKKEEE 1382
             +R RLL L+LL  +LP  +    G    +I +L+T +S +MW  P   A H A + +  
Sbjct: 1320 NVRTRLLALHLLETVLPALKTSNRGQQIQVIEQLMTNISDSMWSAPLASARHCANRIQTA 1379

Query: 1383 LDKQIEHLYCPPPSGTSNASRQ-------------------------------------- 1404
            L +Q         +G S ++++                                      
Sbjct: 1380 LARQRSASTSSSDAGRSESNQRALPFTKKSLTDTTTSSGNSCWMNISLADAPSDEDDDDD 1439

Query: 1405 GYVDIDSVSFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKG 1464
            G +  D+V FD +K VCC+VE    +L+HG G RGYG+   GIT GCYQWKF IV E+KG
Sbjct: 1440 GLILQDAV-FDPDKTVCCSVE-NSHTLVHGSGGRGYGLGATGITAGCYQWKFNIVKENKG 1497

Query: 1465 NEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMD 1524
            NEGTC+GV+R+P+RD++HRTT DMWLYRAYSGN+YH+GE T  LP FTQGDY+T VLDM+
Sbjct: 1498 NEGTCVGVSRYPVRDFSHRTTSDMWLYRAYSGNLYHNGEHTLTLPGFTQGDYVTCVLDME 1557

Query: 1525 AQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGE 1584
            A+T+SFGKNGEEP LAF+D++ +  LYP+V+FYS+N  GEKVKI DM V   PRDL  G+
Sbjct: 1558 ARTVSFGKNGEEPRLAFEDIEATE-LYPVVMFYSSNP-GEKVKICDMQVRGAPRDLYPGD 1615

Query: 1585 PYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKEL 1629
            P CAP+  ++ ES+ISL+  LH+ D+W+  VN CLLDRL+ I ++
Sbjct: 1616 PLCAPMTSILSESHISLVNWLHRNDQWRDVVNTCLLDRLTSIGQV 1660



 Score =  242 bits (618), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 192/538 (35%), Positives = 279/538 (51%), Gaps = 75/538 (13%)

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L+S +IS   P LV  L   +IVD++ GDSH LAL+  NEVY WG+N MGQCGQ + ++P
Sbjct: 164 LQSEAISLR-PKLVEDLQFTRIVDIACGDSHCLALTHDNEVYGWGNNAMGQCGQGHTTSP 222

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFL 572
           + +  KV  LE V + QI AG+  S+A+T  PS+  + +   P CVD++  TF+ +R F+
Sbjct: 223 ITRVKKVASLEGVTIHQISAGTSHSVAWTALPSDRQVVAWHRPFCVDLQEGTFSHLRSFI 282

Query: 573 EQYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHV 631
           E Y   F  T    PF +   H QF+LL L+LL +HL LAL G  ++SVLGN+   LRH+
Sbjct: 283 EHYCEGFNGTQPPPPFPTAREHQQFVLLCLKLLCTHLQLALAGGLTASVLGNQARPLRHL 342

Query: 632 LFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRML 687
           LF+L+D  T   I+  ++D L+IGA LLLPP+ E+++LL +LL Q       LS GQRM 
Sbjct: 343 LFRLIDANTPASIQKAVSDTLSIGAPLLLPPLRERMELLHSLLPQGPDRWDSLSKGQRMQ 402

Query: 688 LGVITSSLHKNEELAHIFYFDQ-----------------------NQDTNILMLEDLLKI 724
           LG++ +SL +N  +A +  F                          +DT+  + E L+K 
Sbjct: 403 LGIVLTSLQENIHVASLLGFTSPLEGELSPPLEGDGSGMSLGASPTEDTH--LAEVLMKT 460

Query: 725 SCRKSYAYTLTHF---QSNACKVSPQET-----PVSQVVTLLQSLIITQYVVKHSEICEE 776
             R    +T   F   + N+ K  P  T     P S +  LL SL        H+   +E
Sbjct: 461 LLRNLGYHTEQAFGELEKNSDKRQPSITCEDGAPPSHLRELLSSLQKHLLAYCHASNSDE 520

Query: 777 VYQHY------LDIVFPHVIDILERSIAWVNQ-GKDI-----EVLNELLYNSLAGKILFS 824
           +          L ++ PH +++L+RS   + Q G +        L ++L NS AG +L  
Sbjct: 521 ISSSVSLLHKHLCLLLPHAVEVLQRSTTLLKQSGSNASQAVRSKLRDVLVNSAAGSMLSH 580

Query: 825 IVHSLLINIHRSMYPTLRYFLAILPLLDSLNQLLPMQGNYTE------------------ 866
           I+HSLL+       P L + LA+LP LD LN+LLP      E                  
Sbjct: 581 ILHSLLLLPVTVTRPLLHHLLALLPELDKLNRLLPAASVLEEQEMEWPMRVSSDSPDPTA 640

Query: 867 ------TNSFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLE 918
                    ++WL+D+ER  +L+IG  LG ML   P + EE ET  W+ + L+  G+E
Sbjct: 641 MPLPQPVRGWVWLVDLERTCSLVIGWCLGGMLAWRPLSKEERETSGWMVSKLMQNGME 698



 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 13/209 (6%)

Query: 374  VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
            VG VSCG +HTL +S DG  VW+ G G+ GKLG  ++   + P+ IE+L    ++KVC G
Sbjct: 3958 VGQVSCGMNHTLCVSADGTIVWAFGDGDYGKLGLGNSTAKSYPQRIESLCNIGIKKVCCG 4017

Query: 434  TSFSVALTWDGLVFWWG----LGLRSSSISF-HTPVLVTGLSSHQIVDVSIGDSHVLALS 488
            T +SVALT DG VF +G     GL  +     + P  V  L+   + D+++G  H +AL+
Sbjct: 4018 TQYSVALTKDGRVFTFGQDRLTGLSENRARLANRPQQVLALAGFFVEDIAVGSEHTVALT 4077

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
               +V+ WGSN+ GQ G  +F N V +P  V  L+   ++QI AG   S A+T PP    
Sbjct: 4078 STGDVWGWGSNSDGQLGLGHF-NTVREPVLVGSLQGKNIQQIAAGRSHSAAWTAPPVPRC 4136

Query: 549  LSSAFTPLCVDVRPHTFTLIREFLEQYSA 577
               +  PL + +  H  T       QY+A
Sbjct: 4137 SPGSPAPLQLGLPDHIPT-------QYTA 4158



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 171/365 (46%), Gaps = 40/365 (10%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-- 246
            +V+ WG     Q+ +  RG  + P L +  S+ + +  GQ CTF++ S G +   G+G  
Sbjct: 3689 EVFVWGSGRQGQLAETGRGTAT-PNLVTSFSSAQQVICGQNCTFVIHSNGTVSACGEGSY 3747

Query: 247  -WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGH
Sbjct: 3748 GRLGQGNSDDLHTLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3807

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQV---SAGHSHSAAVTEDGLLY-TWGEGDHGRLGHGDL 359
            GN+  QRRP+ +   L G+ ++QV   +AG SHSAA T   +   + G     +LG  D 
Sbjct: 3808 GNSDRQRRPRQVE-ALQGEEISQVRCIAAGRSHSAAWTAPPVPRCSPGSPAPLQLGLPD- 3865

Query: 360  KSRHTPTLVTELSDVGAVSCGESHTLV--LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
               H PT  T L D    S      L+   S   ++ W +   NL    H   G      
Sbjct: 3866 ---HIPTQYTALKDCSPGSVRARLRLLHHFSDLMYSSWRL--LNLDPAQHITLGPYGA-- 3918

Query: 418  VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDV 477
             I  L    +R + A   +++ +                +I +  PV+  G S  Q   V
Sbjct: 3919 GISGLMDGSLRPLLAPRVYTLPMV--------------RAIDYSEPVVALGQSVGQ---V 3961

Query: 478  SIGDSHVLALSQYNE-VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
            S G +H L +S     V+A+G    G+ G  N S     P ++  L ++ ++++C G+ +
Sbjct: 3962 SCGMNHTLCVSADGTIVWAFGDGDYGKLGLGN-STAKSYPQRIESLCNIGIKKVCCGTQY 4020

Query: 537  SIAYT 541
            S+A T
Sbjct: 4021 SVALT 4025



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 11/175 (6%)

Query: 321  GKRVTQVSAGHSHSAAVTEDG-LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AV 377
            G+ V QVS G +H+  V+ DG +++ +G+GD+G+LG G+  ++  P  +  L ++G   V
Sbjct: 3955 GQSVGQVSCGMNHTLCVSADGTIVWAFGDGDYGKLGLGNSTAKSYPQRIESLCNIGIKKV 4014

Query: 378  SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
             CG  +++ L++DG  V++ G   L  L          P+ + AL  F V  +  G+  +
Sbjct: 4015 CCGTQYSVALTKDGR-VFTFGQDRLTGLSENRARLANRPQQVLALAGFFVEDIAVGSEHT 4073

Query: 438  VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
            VALT  G V+ WG      LGL   + +   PVLV  L    I  ++ G SH  A
Sbjct: 4074 VALTSTGDVWGWGSNSDGQLGLGHFN-TVREPVLVGSLQGKNIQQIAAGRSHSAA 4127



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 19/216 (8%)

Query: 243  YGKGWLGLANTTIQPL--PK--RVPLEAAI------VSLSVS----KCSEAHVLTVTSEG 288
            YG G  GL + +++PL  P+   +P+  AI      V+L  S     C   H L V+++G
Sbjct: 3916 YGAGISGLMDGSLRPLLAPRVYTLPMVRAIDYSEPVVALGQSVGQVSCGMNHTLCVSADG 3975

Query: 289  E-VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
              V+++G G++GKLG GN+ ++  P+ I   L    + +V  G  +S A+T+DG ++T+G
Sbjct: 3976 TIVWAFGDGDYGKLGLGNSTAKSYPQRIE-SLCNIGIKKVCCGTQYSVALTKDGRVFTFG 4034

Query: 348  EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            +     L     +  + P  V  L+   V  ++ G  HT+ L+  G  VW  GS + G+L
Sbjct: 4035 QDRLTGLSENRARLANRPQQVLALAGFFVEDIAVGSEHTVALTSTGD-VWGWGSNSDGQL 4093

Query: 406  GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            G      V  P ++ +L+   ++++ AG S S A T
Sbjct: 4094 GLGHFNTVREPVLVGSLQGKNIQQIAAGRSHSAAWT 4129



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 100/238 (42%), Gaps = 57/238 (23%)

Query: 343  LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
            ++ WG G  G+L     +   TP LVT  S    V CG++ T V+  +G TV + G G+ 
Sbjct: 3690 VFVWGSGRQGQLAETG-RGTATPNLVTSFSSAQQVICGQNCTFVIHSNG-TVSACGEGSY 3747

Query: 403  GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT 462
            G+LG  ++  + T  VI AL+ F V +                                 
Sbjct: 3748 GRLGQGNSDDLHTLTVISALQGFVVTQ--------------------------------- 3774

Query: 463  PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
              LVT   S         D H +AL++  EV++WG    G+ G  N S+   +P +V  L
Sbjct: 3775 --LVTSCGS---------DGHSMALTESGEVFSWGDGDYGKLGHGN-SDRQRRPRQVEAL 3822

Query: 523  --EDVC-VRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSA 577
              E++  VR I AG   S A+T PP       +  PL + +  H  T       QY+A
Sbjct: 3823 QGEEISQVRCIAAGRSHSAAWTAPPVPRCSPGSPAPLQLGLPDHIPT-------QYTA 3873



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 1657 MELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVK 1707
            +E +C+ VWPAL ++GG D GLRMGG+C+ + + R   LLG  K G +  K
Sbjct: 1811 LEDMCQHVWPALAIIGGIDKGLRMGGRCIHRQTSREAVLLGVAKVGNSSAK 1861



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 6/130 (4%)

Query: 213  RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWL-GLA--NTTIQPLPKRVPLEAAI 268
            R++SL +  I+ +  G   +  L   G +  +G+  L GL+     +   P++V   A  
Sbjct: 4002 RIESLCNIGIKKVCCGTQYSVALTKDGRVFTFGQDRLTGLSENRARLANRPQQVLALAGF 4061

Query: 269  VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
                ++  SE H + +TS G+V+ WG    G+LG G+  + R P L+ G L GK + Q++
Sbjct: 4062 FVEDIAVGSE-HTVALTSTGDVWGWGSNSDGQLGLGHFNTVREPVLV-GSLQGKNIQQIA 4119

Query: 329  AGHSHSAAVT 338
            AG SHSAA T
Sbjct: 4120 AGRSHSAAWT 4129



 Score = 47.8 bits (112), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C ++H L +T + EVY WG    G+ G G+T S       +  L G  + Q+SAG SHS 
Sbjct: 189 CGDSHCLALTHDNEVYGWGNNAMGQCGQGHTTSPITRVKKVASLEGVTIHQISAGTSHSV 248

Query: 336 AVT 338
           A T
Sbjct: 249 AWT 251



 Score = 43.9 bits (102), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 12/105 (11%)

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEA 421
           P LV +L  + +  ++CG+SH L L+ D + V+  G+  +G+ G    T  +T  K + +
Sbjct: 173 PKLVEDLQFTRIVDIACGDSHCLALTHD-NEVYGWGNNAMGQCGQGHTTSPITRVKKVAS 231

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLV 466
           L    + ++ AGTS SVA        W  L      +++H P  V
Sbjct: 232 LEGVTIHQISAGTSHSVA--------WTALPSDRQVVAWHRPFCV 268



 Score = 41.6 bits (96), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 14/84 (16%)

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           RPKL+   L   R+  ++ G SH  A+T D  +Y WG    G+ G G     HT + +T 
Sbjct: 172 RPKLVED-LQFTRIVDIACGDSHCLALTHDNEVYGWGNNAMGQCGQG-----HTTSPITR 225

Query: 371 LSDVGA--------VSCGESHTLV 386
           +  V +        +S G SH++ 
Sbjct: 226 VKKVASLEGVTIHQISAGTSHSVA 249


>gi|405954129|gb|EKC21652.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 1334

 Score =  308 bits (790), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 166/446 (37%), Positives = 262/446 (58%), Gaps = 43/446 (9%)

Query: 1212 ANGNTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPSDTQGNLEH 1271
            A  + +L   S+N+++++ +    + + L   V   +   L   L  +    +T      
Sbjct: 909  AQFDLILHCSSNNLLNLITLTSGAYSDKLGSGVVQCIVDLLWNQLTHIWSTGNTSS---Q 965

Query: 1272 DVHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQPWIQSLLYLL-SISPSGLCKLNLLRA 1330
            ++ +   + +L  +L F+  + + S + + L ++ WI  +L +      SG   L+ +R+
Sbjct: 966  EIQDSGWQSSLGNFLLFLKRVAAASAIQKHLTSRKWISRILAMTGQFDESGSIILSNMRS 1025

Query: 1331 RLLTLNLLTAIL--------PHAQQGELGIITELLTQLSHNMWKVPRTVAHHNALKK--- 1379
            RL+  ++L  IL        P+  Q    I+ +L   L+ NMWK+P+ +    A +K   
Sbjct: 1026 RLIAFSVLEMILSSCGKDTDPNYMQE---IVEDLFQCLADNMWKIPQQLELQKAQEKKCS 1082

Query: 1380 ---------EEELDKQIEHLYCPPPSGTSNASRQGYVDIDSVSFDKEKCVCCTVECGGQS 1430
                     +  LDK+++             S +  + + + +FD +KC+ CT E   Q 
Sbjct: 1083 LQWKLSAGSDFNLDKEMD-------------SEETKIMMQNATFDTDKCLNCTTE-SPQV 1128

Query: 1431 LIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWL 1490
            L+H    +GYG+ +  +  GCY+WK LIV E+KGNEGTC+GV++WPIRDY HRTT DMWL
Sbjct: 1129 LVHSTSGKGYGLGSTAMVSGCYKWKILIVKENKGNEGTCVGVSKWPIRDYTHRTTTDMWL 1188

Query: 1491 YRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPL 1550
            YRAYSGN+YH GEQT  L  FTQGD+ITVVLDMDA+TL+FGKNGE+P +AF+D+D S  L
Sbjct: 1189 YRAYSGNLYHGGEQTMALNGFTQGDFITVVLDMDAKTLAFGKNGEDPRIAFEDIDASE-L 1247

Query: 1551 YPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDR 1610
            YP V+FYS    GEK+K+TDM +CE  ++LL G+P CAPV   ++E+ I ++R+LH+ + 
Sbjct: 1248 YPCVMFYS-GTPGEKIKMTDMQICEGNKELLPGDPLCAPVTSAIMEANICMMRRLHQSEV 1306

Query: 1611 WKAHVNQCLLDRLSVIKELTAAAEED 1636
            W   +N+ ++D+L+ IK+L  + + D
Sbjct: 1307 WGPPINRKVIDQLTKIKDLEKSHKLD 1332



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 185/372 (49%), Gaps = 43/372 (11%)

Query: 593 HAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCL 652
           H  F+ L L++LS+HL LA +G  + +VLGN+   LR++LF+L+D      I   +++ L
Sbjct: 8   HGHFVQLCLKMLSTHLSLAQVGGMTCTVLGNQAPLLRNLLFRLLDSNIPDSIREAVSEIL 67

Query: 653 AIGASLLLPPVVEQLDLLKTLLSQDH----PLSNGQRMLLGVITSSLHKNEELAHIFYFD 708
            +GASLLLPP+ E+++LL +LL Q       LS G++M L +I +SL+ N  ++ +  F 
Sbjct: 68  KVGASLLLPPLRERMELLHSLLPQGQGRWDSLSRGKQMQLSLILTSLYDNNHISTLLGFS 127

Query: 709 QNQD-----------TNILMLEDLLKISCRKSYAYT---LTHFQSNACKVSPQE---TPV 751
            + D            ++++ E L+K   R     T   L   + N  K    +      
Sbjct: 128 DSADHVTSSQPCDGSVDLMLAEILMKTILRNLANETEEALDDLEKNLDKEFEHKMFMMAF 187

Query: 752 SQVVTLLQSL-------IITQYVVK-HSEICEEVYQHYLDIVFPHVIDILERSIAWVNQ- 802
             +  LL SL         TQ   K H+    E+   +  ++F     +L++++  +   
Sbjct: 188 PHLHNLLSSLQKHLLAYCFTQQPWKPHTSPAAELLFKHTSLMFTVTKSLLDKALVLMQHE 247

Query: 803 ---GKDIEVLNELLYNSLAGKILFSIVHSLLINIHRSMYPTLRYFLAILPLLDSLNQLLP 859
                 I  + ++LYNS AG ++F I+++LL+     +   L   L +L ++D L ++LP
Sbjct: 248 NCNSSVIIAIEDILYNSPAGTMMFHIINALLLLPLDWISEMLPDILPLLSVIDCLCKMLP 307

Query: 860 ----MQGNYTETNS------FLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLK 909
                +   +E N+      + WL+DMER  A LIG+ LG ML+G   + +E   + WL+
Sbjct: 308 EIQSFEAFESEDNTEEIPEKWSWLVDMERTCATLIGQCLGGMLVGDQMSKQEKSCLPWLE 367

Query: 910 TSLLSAGLEPST 921
             +   G E S+
Sbjct: 368 NPVFGNGAEMSS 379


>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 651

 Score =  303 bits (776), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 190/453 (41%), Positives = 260/453 (57%), Gaps = 47/453 (10%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD T+  
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244

Query: 97  SLRSRVPLTKSLPPYNAALNLLEEVLRPA--------THYQVDLIRS--ACLVYLILVTL 146
            L S + L   L     +L  L E +  A        T  +  L+ S    + +   +T+
Sbjct: 245 RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKSKLLSSQEGMISFDCFMTI 302

Query: 147 ADDNIKPLG---DRKSSNSNT-------------------------DIDSTSTPKLTYNI 178
                + LG   DR      T                         D   T     +   
Sbjct: 303 LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           GD  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G++GKLGHGN+ +Q+ PKLI G L GK V  VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           LGHGD  SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
             PKVIEAL+   +RKVCAG+  S+ALT  G V
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 19/270 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V+   EVY WG     +L  G      +PKL            + AG   +  ++ DG +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF---SDAQTIEAGQYCTFVISTDGSV 424

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
              G+G +GRLG GD  ++ T   +T      +  V +    + HTL  + +G  V+S G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE-VFSWG 483

Query: 399 SGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----- 452
            G+ GKLGH ++     PK+I+  L+   V  V AG   S A+T DG ++ WG G     
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRL 543

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE-VYAWGSNTMGQCGQDNFSN 511
               S S + P LV  +S+  + +VS G SH +ALS+    V+++G    G+ G  + +N
Sbjct: 544 GHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD-TN 600

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            V +P  +  L+ + +R++CAGS  S+A T
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALT 630


>gi|156396928|ref|XP_001637644.1| predicted protein [Nematostella vectensis]
 gi|156224758|gb|EDO45581.1| predicted protein [Nematostella vectensis]
          Length = 311

 Score =  285 bits (730), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/300 (46%), Positives = 192/300 (64%), Gaps = 16/300 (5%)

Query: 1431 LIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWL 1490
            L+H    RGYG+A +GI  G Y+WKF I  E++GNEGTC+GV R+PI D +HR++ DMWL
Sbjct: 9    LVHSSARRGYGLAGVGIKSGLYEWKFHIAKENRGNEGTCVGVARYPITDDSHRSSPDMWL 68

Query: 1491 YRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPL 1550
            YRAYSGN+YH+GEQ   L  +TQGD++T VLDM+A+TL+FGKNGEEP +AF+ +D +  +
Sbjct: 69   YRAYSGNLYHNGEQNLTLSGYTQGDFLTCVLDMEARTLAFGKNGEEPRVAFEGIDATE-V 127

Query: 1551 YPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDR 1610
            YP V+FYS N  GEKV I DM +   PRDL  G P CAP+P ++ E+ +SL+R LH+   
Sbjct: 128  YPCVMFYS-NTPGEKVTIKDMCMKSAPRDLFPGSPLCAPLPAVLSEALVSLVRALHRRPN 186

Query: 1611 WKAHVNQCLLDRLSVIKELTAAA----EEDNASAFVPQADKGRLVLEEAQMEL------- 1659
            W+  +N C+L+ L  IK          EE+     V   +   + + ++ +         
Sbjct: 187  WETDINLCILEGLQSIKYSVETGREGIEEERDDVRVSHGNLNSMDIFKSMLTFITLTARY 246

Query: 1660 --LCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDLP 1717
              LC  VWPAL VMGG D GLR+GG+C  K S + GT+LG   EG   VK + +D+ + P
Sbjct: 247  TNLCYTVWPALAVMGGVDSGLRVGGRCTAKHSSKEGTILGVANEGSKMVK-VQWDDCEAP 305


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  283 bits (725), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/395 (37%), Positives = 223/395 (56%), Gaps = 9/395 (2%)

Query: 189 KVYTWGCNLHHQILDEV-RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           +V+ WG N   Q+ D     K   PR  S+   +  I AGQ+CTF + S G ++  GKG 
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVLSNGTVMANGKGS 189

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
              LG   +     P  +   A +  +  SK S+ H + +   G++++WG G++GKLGHG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYGKLGHG 249

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           ++ +Q+ PKLI   L  + +     GH HSAAV + G LY WGEGD+GRLG GD   R  
Sbjct: 250 DSTTQKSPKLIEA-LASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSV 308

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V ++ +   V CG +HT+VLS DG TVWS G+   GKLGH DT +   PK+I+AL+ 
Sbjct: 309 PVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQG 368

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
             + ++ AGT  S A+T +G ++ WG    LG  SS  +F  P +V GLS   ++D++IG
Sbjct: 369 LTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAIG 428

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           ++HV+AL++   V+ WG+N  GQCG  +       P  V GL    ++Q+ AG+  +  +
Sbjct: 429 ENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVW 488

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
           +  P    L +   P  +D+   TF+ IRE LE+Y
Sbjct: 489 SAAPCEEHLQTKQKPFKLDLHEKTFSSIRELLEKY 523


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  280 bits (716), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 170/448 (37%), Positives = 251/448 (56%), Gaps = 39/448 (8%)

Query: 38  LGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQSS 97
           L N VL T+  +V +LPPLSL+NE+++  LG E L QV++FL+     TS       + +
Sbjct: 190 LCNDVLHTAKDVVISLPPLSLANESKIPPLGTECLKQVTSFLKSVTMPTSGADLMGKRVA 249

Query: 98  LRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLI--------RSACLVYLILVTLADD 149
               + L          L+ +E  +  +T      +        +++C+ Y   +++   
Sbjct: 250 CELVLGLASQRGSLQHLLDWVEMAVGASTAAATQGLMQGQDGPEQNSCISYDYFMSVLGQ 309

Query: 150 NIKPLGDRKSSNSN-TDIDST---------------STPKLTYNIGDTDIS--------- 184
             K  G      S  +++ ST                  +L      T IS         
Sbjct: 310 MRKATGSSAERGSVLSEMQSTQGLCPLYQAALCLIEEVARLASEYARTCISPDDKKPNSL 369

Query: 185 --VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
               +S+V+ WG N  HQ+ +  + K   P++    +  + IEAGQ+CTF++ S G +  
Sbjct: 370 VVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQQIEAGQYCTFVISSDGSVRA 429

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            GK   G LGL ++  Q   K++  + +I++ +S SK S+ H L +TSEG+V+SWG G++
Sbjct: 430 CGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDY 489

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLGHGNTL+Q+ PK+I+G L GK V  +SAG+ HSA VT+DG LYTWGEGD+GRLGHGD
Sbjct: 490 GKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGRLGHGD 549

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             SR+ PTLV ++S+VG V CG SHT+ +SQD  TVWS G G+ GKLGH DT ++  PK+
Sbjct: 550 SNSRNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKI 609

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLV 446
           IE+L    ++KV  G+  S+ALT  G V
Sbjct: 610 IESLIGLFIKKVGCGSQSSLALTSTGQV 637


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/446 (37%), Positives = 250/446 (56%), Gaps = 39/446 (8%)

Query: 38  LGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQSS 97
           L N VL T+  +V +LPPLSL+NE+++  LG E L QV++FL+     TS       + +
Sbjct: 190 LCNDVLHTAKDVVISLPPLSLANESKIPPLGTECLKQVTSFLKSVTMPTSGADLMGKRVA 249

Query: 98  LRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLI--------RSACLVYLILVTLADD 149
               + L          L+ +E  +  +T      +        +++C+ Y   +++   
Sbjct: 250 CELVLGLASQRGSLQHLLDWVEMAVGASTAAATQGLMQGQDGPEQNSCISYDYFMSVLGQ 309

Query: 150 NIKPLGDRKSSNSN-TDIDST---------------STPKLTYNIGDTDIS--------- 184
             K  G      S  +++ ST                  +L      T IS         
Sbjct: 310 MRKATGSSAERGSVLSEMQSTQGLCPLYQAALCLIEEVARLASEYARTCISPDDKKPNSL 369

Query: 185 --VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
               +S+V+ WG N  HQ+ +  + K   P++    +  + IEAGQ+CTF++ S G +  
Sbjct: 370 VVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQQIEAGQYCTFVISSDGSVRA 429

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            GK   G LGL ++  Q   K++  + +I++ +S SK S+ H L +TSEG+V+SWG G++
Sbjct: 430 CGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDY 489

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLGHGNTL+Q+ PK+I+G L GK V  +SAG+ HSA VT+DG LYTWGEGD+GRLGHGD
Sbjct: 490 GKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDYGRLGHGD 549

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             SR+ PTLV ++S+VG V CG SHT+ +SQD  TVWS G G+ GKLGH DT ++  PK+
Sbjct: 550 SNSRNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGDTNRIYKPKI 609

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDG 444
           IE+L    ++KV  G+  S+ALT  G
Sbjct: 610 IESLIGLFIKKVGCGSQSSLALTSTG 635


>gi|156339709|ref|XP_001620241.1| hypothetical protein NEMVEDRAFT_v1g148712 [Nematostella vectensis]
 gi|156204877|gb|EDO28141.1| predicted protein [Nematostella vectensis]
          Length = 307

 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/300 (46%), Positives = 190/300 (63%), Gaps = 13/300 (4%)

Query: 1428 GQSLIHGPGTRGYGVANIGITRGCYQWKFLI-VNEHKGNEGTCIGVTRWPIRDYNHRTTG 1486
            G  L+H    RGYG+A IGI  G Y+WK  +     +GNEGTC+GV R+PI D +HR++ 
Sbjct: 5    GGMLVHSSARRGYGLAGIGIKSGLYEWKVSVDAPIKRGNEGTCVGVARYPITDDSHRSSP 64

Query: 1487 DMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGKNGEEPHLAFQDLDT 1546
            DMWLYRAYSGN+YH+GEQ   L  +TQGD++T VLDM+A+TL+FGKNGEEP +AF+ +D 
Sbjct: 65   DMWLYRAYSGNLYHNGEQNLTLSGYTQGDFLTCVLDMEARTLAFGKNGEEPRVAFEGIDA 124

Query: 1547 SAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYISLLRQLH 1606
            +  +YP V+FYS N  GEKV I DM +   PRDL  G P CAP+P ++ E+ +SL+R LH
Sbjct: 125  TE-VYPCVMFYS-NTPGEKVTIKDMCMKSAPRDLFPGSPLCAPLPAVLSEALVSLVRALH 182

Query: 1607 KIDRWKAHVNQCLLDRLSVIKELTAAA----EEDNASAFVPQADKGRLVLEEAQMEL--- 1659
            +   W+  +N C+L+ L  IK          EE+     V   +   + + ++ +     
Sbjct: 183  RRPNWETDINLCILEGLQSIKYSVETGREGIEEERDDVRVSHGNLNSMDIFKSMLTFITD 242

Query: 1660 --LCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDLP 1717
              LC  VWPAL VMGG D GLR+GG+C  K S + GT+LG   EG   VK + +D+ + P
Sbjct: 243  TNLCYTVWPALAVMGGVDSGLRVGGRCTAKHSSKEGTILGVANEGSKMVK-VQWDDCEAP 301


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score =  260 bits (664), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 147/343 (42%), Positives = 197/343 (57%), Gaps = 41/343 (11%)

Query: 109 PPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDS 168
           P Y AA+ L+EE+   A+HY    I          VT AD                    
Sbjct: 312 PLYQAAVCLMEEIFSSASHYTRTFIAHD-------VTHADKQT----------------C 348

Query: 169 TSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQ 228
            + P       D D  V    VY WG N  HQ+ +    K  +P+L +    ++ +EAGQ
Sbjct: 349 VAPPS------DADSCV----VYAWGSNSSHQLAEGTSEKILQPKLVTNFPKVQQLEAGQ 398

Query: 229 FCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAA--IVSLSVSKCSEAHVLT 283
           +CTF++D+ G +   GKG    LGL +++ Q  PK++  +A   +  +S SK S+ H L 
Sbjct: 399 YCTFVIDNDGAVSACGKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLA 458

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +T EG ++SWG G++GKLGHGN  +Q+ PKLI G L GK V  + AG+ HSAAVTEDG L
Sbjct: 459 LTVEGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQL 518

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           YTWGEGD GRLGHGD   R+ PTLV ++S+VG V+CG SHT+ +SQDG TVW+ G    G
Sbjct: 519 YTWGEGDFGRLGHGDNSGRNVPTLVKDISNVGQVACGSSHTIAVSQDGRTVWTFGG---G 575

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           KLG ED  +V  PKV++A     +RKV  G+  S+ALT  G V
Sbjct: 576 KLGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLALTSSGQV 618



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           ++Y WG     +L  G  +    P LVT    V  +  G+  T V+  DG  V + G G+
Sbjct: 359 VVYAWGSNSSHQLAEGTSEKILQPKLVTNFPKVQQLEAGQYCTFVIDNDG-AVSACGKGS 417

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT---SFSVALTWDGLVFWWGLG----LR 454
            G+LG  D+   T PK +       V+K+ +       ++ALT +G +F WG G    L 
Sbjct: 418 YGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKLG 477

Query: 455 SSSISFHT-PVLVTGLSSHQIVD-VSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSN 511
             +IS    P L+ G  + ++V  +  G  H  A+++  ++Y WG    G+ G  DN   
Sbjct: 478 HGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNSGR 537

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            V  P+ V  + +  V Q+  GS  +IA +
Sbjct: 538 NV--PTLVKDISN--VGQVACGSSHTIAVS 563


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  256 bits (653), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/354 (38%), Positives = 203/354 (57%), Gaps = 9/354 (2%)

Query: 189 KVYTWGCNLHHQILDEV-RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           +V+ WG N   Q+ D     K   PR  S+   +  + AGQ+CTF + S G ++  GKG 
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVLSNGTVMANGKGS 189

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
              LG   +     P  +   A +  +  SK S+ H + +   G++++WG G++GKLGHG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYGKLGHG 249

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           ++ +Q+ PKLI   L  + +     GH HSAAV + G LY WGEGD+GRLG GD   R  
Sbjct: 250 DSTTQKSPKLIEA-LASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSV 308

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V ++ +   V CG +HT+VLS DG TVWS G+   GKLGH DT +   PK+I+AL+ 
Sbjct: 309 PVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQG 368

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
             + ++ AGT  S A+T +G ++ WG    LG  SS  +F  P +V GLS   ++D+++G
Sbjct: 369 LTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAVG 428

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           ++HV+AL++   V+ WG+N  GQCG  +       P  V GL    ++Q+ AG+
Sbjct: 429 ENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGT 482



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 17/266 (6%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
           + +++TWG   + ++          P+L ++L S  I   + G   +  +   G L ++G
Sbjct: 232 NGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWG 291

Query: 245 KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE-VYSWGVGEHGK 300
           +G    LGL +   + +P +VP    I   S   C   H + ++++G  V+S+G  E+GK
Sbjct: 292 EGDYGRLGLGDALQRSVPVQVP---DIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGK 348

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+T  Q RPK+I   L G  +TQ++AG   SAAVT +G LY WG G    LG+G   
Sbjct: 349 LGHGDTNRQFRPKII-DALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNGSSD 405

Query: 361 SRHT-PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTP 416
                P +V  LS   V  ++ GE+H + L++DG  V++ G+   G+ G        T+P
Sbjct: 406 ETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDG-LVFTWGNNQNGQCGTGSGMATYTSP 464

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTW 442
           ++++ L    +++V AGT+ +    W
Sbjct: 465 QMVQGLHGAGIQQVTAGTTHTFVCFW 490


>gi|402874538|ref|XP_003901092.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
           anubis]
          Length = 711

 Score =  253 bits (647), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 284/558 (50%), Gaps = 80/558 (14%)

Query: 446 VFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           V+ WG    LG  SS  +   P L+  L++ +IVDVSIGDSH LALS  NEVYAWG+N+M
Sbjct: 14  VYAWGCGACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 73

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVR 561
           GQCGQ N + P+ +P KV GL+ + ++QI AG+  S+A+T  P +  + +   P CVD+ 
Sbjct: 74  GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLE 133

Query: 562 PHTFTLIREFLEQYSACFETGDYI---PFCSKVTHAQFILLLLRLLSSHLYLALIGARSS 618
             TF+ +R FLE+Y  C +    I   PF S   H  F+ L L+LLS+HL LAL G  ++
Sbjct: 134 ESTFSHLRSFLERY--CDKINSEIPPLPFPSSREHHSFLKLCLKLLSNHLALALAGGVAT 191

Query: 619 SVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD- 677
           S+LG +   LR++LF+L+D     EI+ ++ + L++GA++LLPP+ E+++LL +LL Q  
Sbjct: 192 SILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGP 251

Query: 678 ---HPLSNGQRMLLGVITSSLHKNEELAHIFYFDQNQDTNIL------------------ 716
                LS GQRM L +I +SL  +  +A +  +    D   L                  
Sbjct: 252 DRWESLSKGQRMQLDIILTSLQDHTHVASLLGYSSPSDATDLSSVCTGYGNLSDQPYGTQ 311

Query: 717 -------MLEDLLKISCRKSYAYTLTHF---QSNACKV------SPQETPV---SQVVTL 757
                  + E L+K   R    YT   F   + N+ K       S    P      + +L
Sbjct: 312 SCHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKFLLGTSSSENSQPAHLHELLCSL 371

Query: 758 LQSLIITQYVVKHSEICEEV--YQHYLDIVFPHVIDILERSIAWVNQ----GKDIEVLNE 811
            + L+   ++   SE    V     +L ++ PH  DI  RS   + +    G   + L +
Sbjct: 372 QKQLLAFCHINNISENSSSVALLHKHLQLLLPHATDIYSRSANLLKESPWNGSVGQKLRD 431

Query: 812 LLYNSLAGKILFSIVHSLL---INIHR----------SMYPTLRYFLAILPLLDSLNQLL 858
           ++Y S AG +L  IV+SLL   +++ R               L   L    LL+      
Sbjct: 432 VIYVSAAGSMLCQIVNSLLLLPVSVARPLLSYLLDLLPPLDCLNRLLPAADLLEDQELQW 491

Query: 859 PMQGN-----------YTETNSFLWLIDMERALALLIGKTLGDMLLGPPEAHEETETVHW 907
           P+ G                 S++WL+D+ER +ALLIG+ LG ML G P + EE +T +W
Sbjct: 492 PLHGGPELIDPAGLPLPQPAQSWVWLVDLERTIALLIGRCLGGMLQGSPVSPEEQDTAYW 551

Query: 908 LKTSLLSAGLEPSTAIID 925
           +KT L S G+E  T  +D
Sbjct: 552 MKTPLFSDGVEMDTPQLD 569



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 15/128 (11%)

Query: 343 LYTWGEGDHGRLGHGDLKSRH-TPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGS 399
           +Y WG G    LG G  ++    P L+ EL+   +  VS G+SH L LS D + V++ G+
Sbjct: 14  VYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHD-NEVYAWGN 70

Query: 400 GNLGKLGHED-TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
            ++G+ G  + TG +T PK +  L    ++++ AGTS S+A        W  L      +
Sbjct: 71  NSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA--------WTALPRDRQVV 122

Query: 459 SFHTPVLV 466
           ++H P  V
Sbjct: 123 AWHRPYCV 130



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 289 EVYSWGVGEHGKLGHGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           EVY+WG G    LG G++  +  RPKLI   L   R+  VS G SH  A++ D  +Y WG
Sbjct: 13  EVYAWGCG--ACLGCGSSEATALRPKLIEE-LAATRIVDVSIGDSHCLALSHDNEVYAWG 69

Query: 348 EGDHGRLGHGDLKSRHT-PTLVTELSDVG--AVSCGESHTLV 386
               G+ G G+     T P  V+ L  +    +S G SH+L 
Sbjct: 70  NNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 111



 Score = 48.5 bits (114), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  ++    L  ++  E A   +      ++H L ++ + EVY+WG    G+ G GN+ 
Sbjct: 23  LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 82

Query: 308 SQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
               +PK +  GL G  + Q+SAG SHS A T
Sbjct: 83  GPITKPKKV-SGLDGIAIQQISAGTSHSLAWT 113


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  253 bits (646), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/381 (39%), Positives = 212/381 (55%), Gaps = 15/381 (3%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
            H  VY +G   H Q L EV      P+L       R +  GQ CTF++++ G +L  G+G
Sbjct: 749  HCDVYLFGAGRHGQ-LAEVGSGVLVPQLTKSFHEARKVVCGQNCTFIINNNGVVLSCGEG 807

Query: 247  WLGLANTTIQPLPKRV----PLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G           R+     L+  IV  L+ S  S+ H + +T  GEV+SWG G++GKL
Sbjct: 808  SYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKL 867

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            GHGN+  QRRP+ I   L G+ V QV+ G  HSA VT DG L+T+G GD+GRLGHG   +
Sbjct: 868  GHGNSDRQRRPRQIEA-LRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTN 926

Query: 362  RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            +  P  V  L +  +G V+CG +HT+++SQD  TVW+ G G+ GKLG   T   T+P  I
Sbjct: 927  KKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKI 986

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQI 474
            E L +  ++K+  G  F+ ALTWDG +F +G      +    T     P +VT LSSH I
Sbjct: 987  EVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHI 1046

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            +D+S+G  H +AL+    VY WGSNT GQ G  + +N V +P+ V  L    +RQI AG 
Sbjct: 1047 IDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGH-TNHVQEPTLVESLSGKNIRQISAGR 1105

Query: 535  LFSIAYTVPPSNSALSSAFTP 555
              S A++    ++  +   TP
Sbjct: 1106 THSAAWSCEHDDAGHTLLGTP 1126


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  250 bits (638), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 1579 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 1637

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 1638 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 1697

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 1698 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 1756

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ I+ L
Sbjct: 1757 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 1816

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 1817 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 1876

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V GL+   VRQI AG   S
Sbjct: 1877 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 1935

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 1936 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 1971


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/368 (39%), Positives = 210/368 (57%), Gaps = 21/368 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            Y WG   H Q+ +  RG  + P +    ++ + +  GQ CTF++   G +L  G+G   
Sbjct: 490 AYLWGGGRHGQLAESGRG-VNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYG 548

Query: 247 WLGLANT----TIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            LG+ N+    T+ P+     L+   ++ ++ S+ S+ H L +T  GEV+SWG G++GKL
Sbjct: 549 RLGMGNSDDLFTLSPISA---LQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKL 605

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           GHGN+  QRRP+ I   L G+ V  ++ G  HSA VT DG L+T+G GD+GRLGHG+  +
Sbjct: 606 GHGNSDRQRRPRQIEA-LRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSAN 664

Query: 362 RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           + TP  VT L    +G V+CG +HTLVLS DG+TVW+ G G+ GKLG       T+P+ I
Sbjct: 665 KKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAI 724

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISF-HTPVLVTGLSSHQI 474
           + L     +K+C GT FSV LT DG VF +G     G     +     P  +  L+SH I
Sbjct: 725 DVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFI 784

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            DV +G  HVLAL+   EV+ WG+N  GQ G  + SN   +P  +  L+   +RQI AG 
Sbjct: 785 DDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGH-SNAQREPCVIPDLKGKNIRQISAGR 843

Query: 535 LFSIAYTV 542
             S A+T 
Sbjct: 844 NHSAAWTA 851


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 154 VYLWGAGRHGQLAEAGR-NVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 212

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 213 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 272

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 273 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 331

Query: 365 PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 332 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 391

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
               ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 392 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 451

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   +RQI AG   S
Sbjct: 452 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNIRQISAGRCHS 510

Query: 538 IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
            A+T PP          PL +   D  P  +  +RE
Sbjct: 511 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGAVRE 546


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  244 bits (622), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 219/396 (55%), Gaps = 18/396 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            VY WG   H Q+ +  R     P      S  + +  GQ CTF++ + G +L  G+G   
Sbjct: 1610 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 1668

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 1669 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 1728

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G+  ++  
Sbjct: 1729 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 1787

Query: 365  PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  VT L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  ++   ++P+ ++ L
Sbjct: 1788 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL 1847

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
                ++KV  GT FSVALT DG V+ +G    +GL       H  P  +  L+   I DV
Sbjct: 1848 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDV 1907

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            ++G  H LAL+   +VYAWGSN+ GQ G  + +N V +P+ V  L+   VRQI AG   S
Sbjct: 1908 AVGAEHTLALASTGDVYAWGSNSEGQLGLGH-TNHVREPTLVTVLQGKNVRQISAGRCHS 1966

Query: 538  IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
             A+T PP          PL +   D  P  +  +RE
Sbjct: 1967 AAWTAPPVPPRAPGVSVPLQLGLPDAVPPQYGALRE 2002



 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/172 (63%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 1456 FLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGD 1515
            F IV E++GNEGTC+GV+RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT  L SFTQGD
Sbjct: 1    FYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGD 60

Query: 1516 YITVVLDMDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCE 1575
            +IT VLDM+A+T+SFGKNGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  
Sbjct: 61   FITCVLDMEARTISFGKNGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRG 118

Query: 1576 TPRDLLCGEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIK 1627
            TPRDLL G+P C+PV  ++ E+ I L+R LH+ DRW   +N+ +++RL  IK
Sbjct: 119  TPRDLLPGDPICSPVAAVLAEATIQLIRILHRTDRWTYCINKKMMERLHKIK 170


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score =  241 bits (614), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 251/500 (50%), Gaps = 73/500 (14%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           + Y +G N  HQ+      K  +       +NI+ I AGQ+CTF++   G +        
Sbjct: 69  EAYAFGSNSSHQLAMGSTEKLLKATPVPHMNNIQSIIAGQYCTFMVLHNGSM-------- 120

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
                                     KC                 G G +G+LG G +  
Sbjct: 121 --------------------------KCC----------------GKGSYGRLGLGTSDV 138

Query: 309 QRRPK---LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           Q   K       G   K +        HS AV ++G +Y+WGEG++G+LGHG+  ++ TP
Sbjct: 139 QTSIKDLDTFPEGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTP 198

Query: 366 TLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV--------TT 415
            L+  LS+  + +VSCG  H+  ++ D   +W+ G G  G+LGH DTG++          
Sbjct: 199 KLIAGLSNKVIRSVSCGNRHSAAVTIDNE-LWTWGEGEHGRLGHGDTGRLGHGDTQKQIK 257

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSS 471
           PKVIEAL+   ++KV A   FS+ALT  G ++ +G     GL +   S+ TP L+  L+ 
Sbjct: 258 PKVIEALKGQLIQKVSAANQFSIALTKTGKLYSFGKGSGTGLGTPDTSYSTPQLIQSLAD 317

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             I+DV+ GD H LAL+Q  +VY WG+N+MGQCGQ + +N + +P KV GL+ V V+QI 
Sbjct: 318 VIIIDVTTGDGHCLALTQRGDVYGWGTNSMGQCGQGHNNNSISKPGKVEGLDGVQVQQIS 377

Query: 532 AGSLFSIAYTVPPSNSALSSAFT-PLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSK 590
           AG+  SI +T  P++   ++ +  P C+ V   TF  + + +E+Y          PF + 
Sbjct: 378 AGTSHSIVWTAIPNDRCATAVWHWPYCISVEEKTFENLVKLIEKYWETRNDTPTPPFVTL 437

Query: 591 VTHAQFILLLLRLLSSHLYLALIGARSSSV---LGNETAALRHVLFKLVDMETSPEIETL 647
            +   F+   L LL  HL  +++ +    V   +G  T  LR++L KL+D    P ++T+
Sbjct: 438 ESQESFVYHCLSLLQIHLN-SVVSSGPDLVHISIGGHTKPLRNLLMKLMDSHLPPRLDTV 496

Query: 648 LTDCLAIGASLLLPPVVEQL 667
            +D + + +S+LLPP ++++
Sbjct: 497 CSDTIEVCSSVLLPPTLDRV 516



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 35/299 (11%)

Query: 1437 TRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGVTRWPIRDYNHRTTGDMWLYRAYSG 1496
            T  + +    I  G + WK   V     N   C+G+   P+ D   R + ++W+  A +G
Sbjct: 1652 TVSWAIGTAPIHNGIFTWK---VTAKSPNPAFCVGLCIKPLNDVQVRNSSELWVLEAQTG 1708

Query: 1497 NVYHSGEQTTMLPSFT--QGDYITVVLDMDAQTLSFGKNGEEPHLAFQD-LDTSAPLYPI 1553
             +YH GE  ++L SFT  Q D +T+  +   +TL F  N +E    F + L   + LYP+
Sbjct: 1709 ILYHDGETGSVL-SFTVQQNDTLTIQYNSTQKTLGFAINDKELQFPFSEVLSYDSDLYPV 1767

Query: 1554 V-----------LFYS--TNANGEKVKITDMTVCETPRDLLCGEPYCAPVPILMVESYIS 1600
            V           LF+S  T   G               + + G P  AP    + +  ++
Sbjct: 1768 VICDRPHNRTELLFHSFTTTDKGSGAGAGSDGSSGMIEEKVSGYPLLAPSMSALSQCIVN 1827

Query: 1601 LLRQLHKIDRWKAHVNQCLLDRL----SVIKELTAAAEEDNASAFVPQADKGRLVLEEAQ 1656
            ++ +L   + W + +N+ + ++     +++ +L AA   D  S+         L   E  
Sbjct: 1828 IIHKLQLKETWGSIINEKIKEKFNTMNALVDQLMAAYTNDTDSS------NPSLSFNETC 1881

Query: 1657 MELL---CREVWPALVVMGGGDDGLRMGGKCVEKPSGRV--GTLLGTLKEGIAKVKDLN 1710
             E++   C+EVWP L V+GG + G R+GG C     G V  G ++G  + G   V++ N
Sbjct: 1882 GEIINNFCKEVWPCLAVVGGVEPGFRIGGACTVNKGGVVTEGVVIGVQRNGKIIVQEAN 1940


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 167/456 (36%), Positives = 239/456 (52%), Gaps = 32/456 (7%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
             Y WG   H Q+ +  R   + P   S  S+ + I  GQ CTF++ + G +L  G+G   
Sbjct: 993  AYLWGGGRHGQLCEAGRSVLT-PLHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSYG 1051

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+ L  S  S+ H L +T  GEV+SWG G++GKLGHG
Sbjct: 1052 RLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHG 1111

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            N+  QRRP+ I   L G+ V Q++ G  HSA VT DG L T+G GD+GRLG G + +R T
Sbjct: 1112 NSDRQRRPRQIEA-LQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKT 1170

Query: 365  PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P  V  L +  +G V+CG +HT+ +S DG T W+ G G+ GKLG  +T   +TP  IEAL
Sbjct: 1171 PERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEAL 1230

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFH-TPVLVTGLSSHQIVDV 477
               +V+KV  GT FSVALT DG V  WG    +G   + +  H TP  VT L+ H I +V
Sbjct: 1231 SGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEV 1290

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL-EDVCVRQICAGSLF 536
             +G  H LAL+    V+ WG N  GQ G  + +  V +P  + GL     ++QI AG   
Sbjct: 1291 VVGSEHTLALTSDGNVWGWGLNADGQLGLGH-TGTVREPQLLGGLGSSEPIKQISAGRTH 1349

Query: 537  SIAYTVPPSNSALSSAF-----------TPLCVDVRPHTFTLIREFLEQYSACFETGDYI 585
            S A++   + S  S              TP CV   P  +  ++E      AC E    +
Sbjct: 1350 SAAWSGAKAASVRSGTAAAASAASLQLGTPACV---PAQYAALKEC--SVVACRERLRVL 1404

Query: 586  PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVL 621
               S + ++ + LL L  LS   + + +  R  +++
Sbjct: 1405 HQFSDIIYSSWRLLNLSPLSDQTHDSWLDCRREAIV 1440


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score =  234 bits (597), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 212/368 (57%), Gaps = 13/368 (3%)

Query: 188  SKVYTWGCNLHHQI-LDEVRGK-CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +K Y WG   H Q+ L+   G+ C+ PR      N++ IE G  CTFL  ++G +   G+
Sbjct: 1383 AKAYVWGGVRHGQLGLNMNVGRHCALPRRLEAFDNMQTIELGLNCTFLCSASGAVTSTGE 1442

Query: 246  G---WLGLANTTIQPLPKRV-PLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G    LG  N+    +P  V  L+  IV+ LS S  S+ H L +T  GE+++WG G++GK
Sbjct: 1443 GSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTWGDGDYGK 1502

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN+  QRRP+L+   L G+ V     G+ H+A VT  G LYT+G GD+GRLGHG+  
Sbjct: 1503 LGHGNSERQRRPRLVET-LVGETVVDGCCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTT 1561

Query: 361  SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            S+ TPTLV +  ++ +VSCG +HTL LS+DG TVW+ G G+ GKLG  +T  V +P  I 
Sbjct: 1562 SKKTPTLVHDCQNIASVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQSPNKIA 1621

Query: 421  ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSS--HQIVDVS 478
            AL    ++ V  G  +SV L  +G V+  G    +        V+ T L +   ++  +S
Sbjct: 1622 ALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFNGIGGPGQTVIPTKLETINKRVFQIS 1681

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
             G  + LAL +   V++WG+N+ GQ G  +F N V +P  ++ L    ++Q+ AG   SI
Sbjct: 1682 CGAEYTLALDEDGNVWSWGNNSDGQVGCGHF-NKVHEP--LLTLTGHRIKQVRAGKTHSI 1738

Query: 539  AYTVPPSN 546
            A+T PP +
Sbjct: 1739 AWTSPPKS 1746


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score =  230 bits (587), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/368 (39%), Positives = 212/368 (57%), Gaps = 13/368 (3%)

Query: 188  SKVYTWGCNLHHQI-LDEVRGK-CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +K Y WG   H Q+ L+   G+ C+ PR      N++ IE G  CTFL  ++G +   G+
Sbjct: 730  AKAYVWGGVRHGQLGLNMNVGRHCALPRRLEAFDNMQTIELGLNCTFLCSASGAVTSTGE 789

Query: 246  G---WLGLANTTIQPLPKRV-PLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G    LG  N+    +P  V  L+  IV+ LS S  S+ H L +T  GE+++WG G++GK
Sbjct: 790  GSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTWGDGDYGK 849

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN+  QRRP+L+   L G+ V     G+ H+A VT  G LYT+G GD+GRLGHG+  
Sbjct: 850  LGHGNSERQRRPRLVET-LVGETVVDGCCGYKHTAVVTATGYLYTFGYGDYGRLGHGNTT 908

Query: 361  SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            S+ TPTLV +  ++ +VSCG +HTL LS+DG TVW+ G G+ GKLG  +T  V +P  I 
Sbjct: 909  SKKTPTLVHDCQNIVSVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQSPNKIA 968

Query: 421  ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSS--HQIVDVS 478
            AL    ++ V  G  +SV L  +G V+  G    +        V+ T L +   ++  +S
Sbjct: 969  ALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFNGIGGPGQTVIPTKLETIKKRVFQIS 1028

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
             G  + LAL +   V++WG+N+ GQ G  +F N V +P  ++ L    ++Q+ AG   SI
Sbjct: 1029 CGAEYTLALDEDGNVWSWGNNSDGQVGCGHF-NKVHEP--LLTLTGHRIKQVRAGKTHSI 1085

Query: 539  AYTVPPSN 546
            A+T PP +
Sbjct: 1086 AWTSPPKS 1093


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/355 (40%), Positives = 199/355 (56%), Gaps = 14/355 (3%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-- 246
            + + WG   + Q+ +  RG     R+ S  S  + I  GQ CTF++ + G +L  G+G  
Sbjct: 1802 EAFLWGSGRNGQMCEGGRGAFVPVRVPSF-SCSQQIVCGQNCTFVVQNNGTVLACGEGSY 1860

Query: 247  -WLGLANTT-IQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG  N+  +  L     ++  +V+ L+ S  S+ H L VT  GEV+SWG G++GKLGH
Sbjct: 1861 GRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGH 1920

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN+  QRRP+ I   L G+ V Q+S G  HSA VT DG L+T+G GD+GRLG G   ++ 
Sbjct: 1921 GNSDRQRRPRQIEA-LQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKK 1979

Query: 364  TPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
             PT V  L    +G V+CG +HTL +S DG  VW+ G G+ GKLG  +T     P  I+A
Sbjct: 1980 VPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKA 2039

Query: 422  LRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGL-RSSSISFHTPVLVTGLSSHQIVD 476
            L+   ++KV  GT FSVAL+  G VF WG    +G   +   S   P  V  LS + I D
Sbjct: 2040 LQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSNCQPQEVASLSGYFIED 2099

Query: 477  VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
            V  G  H L L+   +V+ WGSN+ GQ G  + ++PV +P  V  L    +RQ+C
Sbjct: 2100 VVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKNIRQVC 2154



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 25/268 (9%)

Query: 289  EVYSWGVGEHGKL---GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
            E + WG G +G++   G G  +  R P             Q+  G + +  V  +G +  
Sbjct: 1802 EAFLWGSGRNGQMCEGGRGAFVPVRVPSFSCS-------QQIVCGQNCTFVVQNNGTVLA 1854

Query: 346  WGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCG-ESHTLVLSQDGHTVWSMGSG 400
             GEG +GRLG G+    H+ T ++ +        A S G + HTL +++ G  V+S G G
Sbjct: 1855 CGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGE-VFSWGDG 1913

Query: 401  NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
            + GKLGH ++ +   P+ IEAL+   V ++  G   S  +T DG +F +G      LGL 
Sbjct: 1914 DYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGL- 1972

Query: 455  SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS-QYNEVYAWGSNTMGQCGQDNFSNPV 513
             ++ +   P  V  L SHQI  V+ G +H L +S     V+A+G    G+ GQ N     
Sbjct: 1973 GTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGK- 2031

Query: 514  DQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              P+K+  L+   ++++  G+ FS+A +
Sbjct: 2032 HLPTKIKALQGHVIKKVACGTQFSVALS 2059



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 3/75 (4%)

Query: 1643 PQADKGRLV--LEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGRVGTLLGTLK 1700
            P+ D   +V   +E  ++ LC +VWP+LV++GG D GLR+GG C  K + + GTL+G  +
Sbjct: 17   PEEDMDIIVDYTDEETVKTLCSQVWPSLVLIGGLDPGLRVGGSCRHKTTSKKGTLMGVSR 76

Query: 1701 EGIAKVKDLNFDEID 1715
            EG A VK +++D+ D
Sbjct: 77   EGSATVK-VHWDDGD 90


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 218/402 (54%), Gaps = 28/402 (6%)

Query: 180 DTDISVAHSKVYTWGCNLHHQILDEVRGK-CSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           D +IS A   VY WG N+H + L  ++GK C +P L S    +R I  GQ CTFLL + G
Sbjct: 281 DWEIS-APITVYVWGSNIHGE-LPGLQGKTCLQPNLVSTFKQVREIVCGQNCTFLLQTNG 338

Query: 239 GLLVYGKGWLG-LANTTIQPLPKRVPLEA----AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +   G+G  G L   T       VP+       I+ L+ S   + H L V   GEV+SW
Sbjct: 339 SVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSW 398

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G++GKLGHGN+  QR+PK I+  L  + V Q S G  HSA +T+DG ++T+G+G +G 
Sbjct: 399 GDGDYGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGI 457

Query: 354 LGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG G    + TP L+  L +  +  ++CG+ HTL L+ +G  +++ G G  GKLG   T 
Sbjct: 458 LGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTS 517

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLV 466
             + P ++++ R   ++K+  G+ FS+ L  +G ++ +G    LG+  + +  +T P +V
Sbjct: 518 VRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIV 577

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           + L  H I+D+++G +++LAL     ++ WG+N  GQ G    +NP   P  V       
Sbjct: 578 SSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGT-TNPHYLPQLVCTFSGTN 636

Query: 527 VRQICAGSLFSIAYT---VPPSNS--------ALSSAFTPLC 557
           + ++ AG+    A++    P SN+        A+ S++  LC
Sbjct: 637 ITRLSAGTTHCAAWSNSQSPSSNTQLQIGTPNAIPSSYKSLC 678


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  223 bits (569), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 205/371 (55%), Gaps = 18/371 (4%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGK 245
            SKV  WG N   Q+      K   P   S+ S ++  HI  G    F++   G L   G+
Sbjct: 3241 SKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGE 3300

Query: 246  G---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKL 301
            G    LGL +    P PK+VP+ +  V   V+  S   H + +T +G+V+SWG GE GKL
Sbjct: 3301 GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3360

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            GHGN L+  +PKLI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  +
Sbjct: 3361 GHGNRLTLEKPKLIET-LRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCT 3419

Query: 362  RHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
            +  P LVT L+D  V  V+CG  ++ TL L+++G  V+S G G+ GKLG   +   + P 
Sbjct: 3420 QLKPKLVTALADHRVVQVACGSRDAQTLCLTEEG-LVFSWGDGDFGKLGRGGSEGCSIPH 3478

Query: 418  VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSH 472
             +E L    V ++  G  FS+ALT  G V+ WG G        +      P  + GL   
Sbjct: 3479 QVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3538

Query: 473  QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
            +++ V++G  H LA++   +VYAWG N  GQ G  N +    +PS V+GL+ + V ++  
Sbjct: 3539 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGN-TIVNKKPSLVLGLDGIFVNRVAC 3597

Query: 533  GSLFSIAYTVP 543
            GS  S+A+++P
Sbjct: 3598 GSSHSVAWSLP 3608



 Score =  176 bits (447), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 159/301 (52%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++S+GEV+SWG GE GKLGHGN  S  RPKLI   L G  V  ++ G +HSA +T 
Sbjct: 4475 HCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITS 4533

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCG--ESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A+  +CG  ++ TL ++ D + VW
Sbjct: 4534 QGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VW 4592

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4593 SWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYH 4652

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 ++     P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D   
Sbjct: 4653 RLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLG-DGTV 4711

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
            + + +P  V  L+   + ++  GS    A+T+  S   LS A  P      P  + L+R+
Sbjct: 4712 SAIQRPRLVQSLQGKHIVKVICGS----AHTLALSTYQLSEAVRP--PPSPPLEYDLVRD 4765

Query: 571  F 571
             
Sbjct: 4766 I 4766



 Score =  171 bits (432), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 230/484 (47%), Gaps = 39/484 (8%)

Query: 221  IRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEA 279
            +R +   +   ++L +TG +L          +TT    PK +  LE+  +    + C   
Sbjct: 584  VRQVACSETSIYILTTTGQVLSLQHSNCHTPDTTA---PKPIEGLESVNIVQLAAHCEGR 640

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            HVL +T+ G+V+SWG GE G+LGHG+T S+  P  I+  L  ++VT V  G S+SAA+T 
Sbjct: 641  HVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVA-LAERQVTGVFCGSSYSAAITA 699

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
             G LYTWG G +GRLGHG+ + +H PT+V  L        A+ CG++H+L ++  G  V+
Sbjct: 700  AGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTG-IVY 758

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALR-KFRVRKVCAGTSFSVALTWDGLVFWW---GL 451
            + G G+ GKLG+      + P  IE  +      KV +G+ FSVAL  DG V+ W     
Sbjct: 759  AWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHG 818

Query: 452  GLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CGQDN 508
            G      S HT  P  +  L    IVD+++G +H LAL+   E+Y WG N   Q C    
Sbjct: 819  GRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCV 878

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLI 568
              +P+     +     + +  + AG   SI +    S++       P  VD+  HTF L+
Sbjct: 879  TRDPIVLLPILTTPPTLRIAGMAAGGAQSIVWC--HSSTLGIPVKIPFVVDLSEHTFRLL 936

Query: 569  REFLEQYSACFETGDYIPFCSKVTH------AQFI----LLLLRLLSSHLYLALIGARSS 618
             + L     C   G        V H      A+ I    L LLRL    + +  I  R  
Sbjct: 937  DQLL-----CMVCGSQNVSNDAVRHHPPSQEAECIAVASLNLLRLQLHAMIVNNIHPRHV 991

Query: 619  SVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVVEQLDLLKTLL 674
             ++   +  L  +  +++ +   P +   + +     L +G S++LP   E+   L +LL
Sbjct: 992  GLV-EGSRLLASLKTRILSLAGGPVVLKTMQEAAQWTLQVGWSIILPTASERAQTLTSLL 1050

Query: 675  SQDH 678
               H
Sbjct: 1051 PSGH 1054


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/371 (38%), Positives = 204/371 (54%), Gaps = 18/371 (4%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGK 245
            SKV  WG N   Q+      K   P   S+ S ++  HI  G    F++   G L   G+
Sbjct: 3028 SKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGE 3087

Query: 246  G---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKL 301
            G    LGL +    P PK+VP+ +  V   V+  S   H + +T +G+V+SWG GE GKL
Sbjct: 3088 GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3147

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            GHGN L+  +PKLI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  +
Sbjct: 3148 GHGNRLTLEKPKLIET-LRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCT 3206

Query: 362  RHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
            +  P LVT L D  V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +   + P 
Sbjct: 3207 QLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDG-LVFSWGDGDFGKLGRGGSEGCSIPH 3265

Query: 418  VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSH 472
             ++ L    V ++  G  FS+ALT  G V+ WG G        +      P  + GL   
Sbjct: 3266 QVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3325

Query: 473  QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
            +++ V++G  H LA++   +VYAWG N  GQ G  N +    +PS V+GL+ + V ++  
Sbjct: 3326 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGN-TIVNKKPSLVLGLDGIFVNRVAC 3384

Query: 533  GSLFSIAYTVP 543
            GS  S+A+++P
Sbjct: 3385 GSSHSVAWSLP 3395



 Score =  196 bits (498), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 196/733 (26%), Positives = 334/733 (45%), Gaps = 76/733 (10%)

Query: 202  LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKR 261
            +D    + S   +  L   +R I   + C ++L  +G +L          + T    P +
Sbjct: 546  IDGAMPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVLYLSHA----ISMTEDNYPAQ 601

Query: 262  VP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
            V  LE  IV L+ + C   HVL + S G+VYSWG G+ G+LGHG+T ++  P  I   L 
Sbjct: 602  VKGLECTIVQLA-AHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRI-AALA 659

Query: 321  GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----A 376
             ++VT V  G S+SAA+T  G LYTWG G +GRLGHG+ + ++ PTLVT L        A
Sbjct: 660  DRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVA 719

Query: 377  VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + CG++H+L +++ G   ++ G G+ GKLG+E     + P  ++  +   V KV +G+ F
Sbjct: 720  LGCGDAHSLCVTEAG-LAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQF 778

Query: 437  SVALTWDGLVFWWGLGLRSS---SISFHTPV--LVTGLSSHQIVDVSIGDSHVLALSQYN 491
            SVALT +G V+ WG G         S H+PV  +V  L   +IVD+++G +H LAL+   
Sbjct: 779  SVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASG 838

Query: 492  EVYAWGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            E+Y WG N   Q C +    +P+     +     + V  + AG   S+ +    S+S   
Sbjct: 839  ELYGWGRNDFQQICPECVTRDPIITAPILTTPPTLRVAGMAAGVAQSLFWC--HSSSHGI 896

Query: 551  SAFTPLCVDVRPHTFTLIREFLEQYSACFET--GDYIPFCSKVTHAQFILLLLRLLSSHL 608
             A  P  VD+  HTF L+ + L   S    T    + P       A   L LLRL    +
Sbjct: 897  PAKIPFVVDLSEHTFRLLDQLLCMVSVTSSTDASRHPPSQEAECIAVATLNLLRLQLHAM 956

Query: 609  YLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVV 664
             +  +  R   ++   +  L  +  +++ +   P +   + +     L +G S++LP   
Sbjct: 957  IVNNVHPRQVGLV-EGSRLLASLKTRILSLAGGPVVLKTMQEAAQWTLQVGWSIILPTAS 1015

Query: 665  EQLDLLKTLLSQDH----------PLSNGQRMLLGVITSSLHKNEELAHIF--YFDQNQD 712
            E+   L +LL   H            S G R +  ++  SL     L        + +Q 
Sbjct: 1016 ERAQTLTSLLPAGHDGGATIGSAAQTSAGHRFMTDLLVGSLMAEGGLQTALNQAINHHQH 1075

Query: 713  TNILMLED--------------LLKISCRKSYAYTLT---------HFQSNACKVSPQET 749
             N    ++              LLK   R + + T           + + +    +P+ T
Sbjct: 1076 QNPFQAQEPHGAGSGTHLSLLHLLKQLLRNNSSLTQARLGQLMLGPYLKPDDGFSAPEPT 1135

Query: 750  -PVSQVVTLLQSLIITQ-YVVKHSEI--CEEVYQHYLDIVFPHVIDILERSIAWVNQGKD 805
             P   ++   Q L+++  Y  K  ++   E +   Y+  +    ++ L ++   + QGKD
Sbjct: 1136 SPSLDLLHKFQRLLLSHLYASKADDLSGAEALLYTYIQQLVGPCVNTLAKAYETILQGKD 1195

Query: 806  IEVLNELLYNSLAGKILFSIVHSLLINIHR------SMYPTLRYFLAILPLLDSLNQLLP 859
               + E+L N ++  +L+ ++  L++ I +      + +   R+ + +L  LD  N+L  
Sbjct: 1196 --GVTEILRNDISDALLYELLIGLVV-IQQDKPFLLANFDWNRHLIPLLNALDGFNRLT- 1251

Query: 860  MQGNYTETNSFLW 872
             +G   +T+   W
Sbjct: 1252 QEGELQDTDDMGW 1264



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/322 (36%), Positives = 162/322 (50%), Gaps = 29/322 (9%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++S+GEV+SWG GE GKLGHGN  S  RPKLI   L G  V  ++ G +HSA +T 
Sbjct: 4187 HCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIES-LSGIGVVDIACGSAHSACITI 4245

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCG--ESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A+  +CG  ++ TL ++ D + VW
Sbjct: 4246 QGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VW 4304

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4305 SWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYH 4364

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 ++     P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D   
Sbjct: 4365 RLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG-DGTV 4423

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP---------LCVDVR 561
            + + +P  V  L+   + ++  GS    A+T+  S   LS A  P         L  D+ 
Sbjct: 4424 SAIQRPRLVQSLQGKHIVKVICGS----AHTLALSTYQLSEAVRPPPSPPLEYDLVRDIA 4479

Query: 562  PHT----FTLIREFLEQYSACF 579
            P        L+  F E    C 
Sbjct: 4480 PEVLHARLVLLHHFSELLCPCL 4501


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/383 (36%), Positives = 205/383 (53%), Gaps = 18/383 (4%)

Query: 180  DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDST 237
            D  ++   SKV  WG N   Q+      K   P   S+ S ++  HI  G    F++   
Sbjct: 2884 DQSLNEISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD 2943

Query: 238  GGLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            G L   G+G    LGL +    P P++VP L   +V          H + +T +G+V+SW
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3003

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G GE GKLGHGN L+  +PKLI   L  KRV  ++ G SHSAA+T  G LYTWG G++GR
Sbjct: 3004 GEGEDGKLGHGNRLTLEKPKLIES-LRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGR 3062

Query: 354  LGHGDLKSRHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
            LGHGD  ++  P LVT L    V  V+CG  ++ TL L+++G  V+S G G+ GKLG   
Sbjct: 3063 LGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEG-LVFSWGDGDFGKLGRGG 3121

Query: 410  TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPV 464
            +   + P  +E L    V ++  G  FS+ALT  G V+ WG G        +      P 
Sbjct: 3122 SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPT 3181

Query: 465  LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
             + GL   +++ V++G  H LA++   +VYAWG N  GQ G  N +    +P+ V+GL+ 
Sbjct: 3182 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGN-TVVNKKPNLVLGLDG 3240

Query: 525  VCVRQICAGSLFSIAYTVPPSNS 547
            V V ++  GS  S+A+++P + S
Sbjct: 3241 VFVNRVACGSSHSVAWSLPQNPS 3263



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 227/932 (24%), Positives = 407/932 (43%), Gaps = 133/932 (14%)

Query: 51   RNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTS-------PKADKTV--------- 94
            + LP  SL + +Q+S+L IE + +   FLRQ V           PKAD+ +         
Sbjct: 298  QTLPEASLFDTSQMSTLWIEVVEKSIKFLRQVVLGDVMGGRCLVPKADRHIALNLLLELG 357

Query: 95   -----------------------QSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVD 131
                                   Q S  +R P   +  P  + L   E++    ++  VD
Sbjct: 358  AQKGTLGGSLEGISLLLTLHEKDQESDDNRSPPQNAGAPLVSLLKRYEQIESFGSYSAVD 417

Query: 132  LIR-SACLVYLILVTLADDNIKPLGDRKSSNSN-TDIDSTSTPKLTYNIGDTDISVAHS- 188
                     +L  +TL ++    +  ++++    + +D  + P L      T ++ + S 
Sbjct: 418  SFHFGPTESFLRFLTLPENETTNVDLKQAAVIIISHLDRLAKPHLPAGNYSTKVNKSKSQ 477

Query: 189  KVYTWG---CN--LHHQILDEVRGKC----SRPRLQS----LPS--NIRHIEAGQFCTFL 233
            K++T G   C+  ++  + +   G      S PR  +    LPS   +R +   +   ++
Sbjct: 478  KIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYI 537

Query: 234  LDSTGGLLVYGKGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
            L + G +          +N++    PK    LE   V    + C   HV+ ++S  EV+S
Sbjct: 538  LTTGGQVFSLH------SNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWS 591

Query: 293  WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
            WG G+ G+LGHG+T+S+  P +I+G L+ K+V  +  G S+SAA+T  G L+TWG G +G
Sbjct: 592  WGAGDGGRLGHGDTVSKEHPTMIVG-LHEKQVCGIYCGASYSAAITIAGELFTWGRGTYG 650

Query: 353  RLGHGDLKSRHTPTLVTELS-----DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
            RLGHG+   +  PT V  L      DV A+  G++H++ ++ +G  +++ G G+ GKLG+
Sbjct: 651  RLGHGNSDDKLVPTQVQALKSYKVVDV-ALGSGDAHSMCVTDNG-LLFAWGDGDFGKLGN 708

Query: 408  EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHT 462
                    P  I+ L    V ++ +G+ FSVAL+ DG ++ WG G        +S   + 
Sbjct: 709  GSCNGSPIPVQIDTL--VNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNV 766

Query: 463  PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFSNPVDQPSKVVG 521
            P LV  L   +I DV++G +H LAL+   E+Y WG N   Q C      +P+     +  
Sbjct: 767  PKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILTT 826

Query: 522  LEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFET 581
               + +  +  G+  SI +    S++   ++  P  VD+  HTF ++ + L     C   
Sbjct: 827  PPTLRISGMTCGAAQSIVWC--HSSTLGVASKIPFVVDLSEHTFRMLDQLL--CMVCNSP 882

Query: 582  GD--YIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDME 639
            GD  + P       A   L LLRL    + +  + AR   ++   +  L  +  +++++ 
Sbjct: 883  GDVRHPPSQEAECIAVASLNLLRLQLHAMIVNNVSARQVGLV-EGSRLLASLKSRILNLA 941

Query: 640  TSPEIETLLTDC----LAIGASLLLPPVVEQLDLLKTLLSQDHPL-----SNGQRMLLGV 690
              P +   + +     L +G S+LLP   E+   L +LL   H       S+G R +  +
Sbjct: 942  GGPVVLKTMQEAAQWTLQVGWSILLPTASERAQTLTSLLPAGHDTATTSNSSGHRFMTDL 1001

Query: 691  ITSSLHKNEELAHIFYFDQNQDTNILMLEDLLKISCRKSYAY----------TLTHFQSN 740
            +  SL     L        NQ  N    +D        S  +          +LT  +  
Sbjct: 1002 LVGSLMAEGGLQTAL----NQAINAQRSQDCTSTGTHLSLLHLLKQLLRNNSSLTQARLG 1057

Query: 741  ACKVSP------------QETPVSQVVTLLQSLIITQ-YVVKHSEI--CEEVYQHYLDIV 785
               + P              +P   ++   Q L+++  Y  K  ++   E +   Y+  V
Sbjct: 1058 QLMLGPYLKTEEGFSSPEPPSPSLDLLHKFQRLLLSYIYQSKTDDLSGAEALLDTYIQQV 1117

Query: 786  FPHVIDILERSIAWVNQGKDIEVLNELLYNSLAGKILFSIVHSL-LINIHRSMYPTL--- 841
                +  L ++   + QGKD   + E+L N ++  +L+ ++  L LI   +S++ +    
Sbjct: 1118 VGACVTTLNKAHETILQGKD--GVAEILKNDISDALLYELLIGLVLIQKEKSLFLSTFDW 1175

Query: 842  -RYFLAILPLLDSLNQLLPMQGNYTETNSFLW 872
             ++F+ +L  LD+ N+L   +G   +++   W
Sbjct: 1176 NKHFIPLLHALDNFNRLT-HEGEVHDSDDMGW 1206



 Score =  176 bits (447), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/338 (35%), Positives = 165/338 (48%), Gaps = 29/338 (8%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            L+  I+          H L ++S+GEV+SWG GE GKLGHGN  S  RPKLI   L G  
Sbjct: 4019 LQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE-ALSGIG 4077

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC-- 379
            V  ++ G +HSA +T  G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  
Sbjct: 4078 VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGS 4137

Query: 380  GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            G++ TL ++ D + VWS G G+ GKLG   +     P  IE+L    V KV  G+ FSVA
Sbjct: 4138 GDAQTLCITDDDN-VWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVA 4196

Query: 440  LTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
            LT  G V+ WG G        ++     P  V  L   +I+ ++ G  H +A S   EV+
Sbjct: 4197 LTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVF 4256

Query: 495  AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
             WG N  GQ G D     + +P  V  L+   + ++  GS    A+T+  S   LS A  
Sbjct: 4257 TWGDNDEGQLG-DGTVTAIQRPRLVQSLQGKHIVKVICGS----AHTLALSTYQLSEAVR 4311

Query: 555  P---------LCVDVRPHT----FTLIREFLEQYSACF 579
            P         L  D+ P        L+  F E    C 
Sbjct: 4312 PPPSPPLEYDLVRDISPEVLHARLVLLHHFSELVCPCL 4349


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  217 bits (553), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 155/433 (35%), Positives = 220/433 (50%), Gaps = 40/433 (9%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            HS VY WG N   Q+      K   P    + S ++  HI  G    F++   G L   G
Sbjct: 2933 HSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACG 2992

Query: 245  KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL + +    PK +P  +  V   VS  S   H L +T +G+V+SWG GE GK
Sbjct: 2993 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK 3052

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN++S  +P+LI   L  KR+  ++ G  HSAA+T  G LYTWG G++GRLGHGD  
Sbjct: 3053 LGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTA 3111

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    +  ++CG  ++ T+ L+ DG  V+S G G+ GKLG   +    TP
Sbjct: 3112 TQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADG-LVYSWGDGDFGKLGRGGSDGCYTP 3170

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
             +I+ L    V ++  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3171 LLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG 3230

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             +++ V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +PS V  L+D  V ++
Sbjct: 3231 KKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQ--QGNGTTIVNKKPSLVHELDDARVNRV 3288

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACF-------ETGD 583
              GS  SIA+ +            P   +  P TF   ++ L Q    F       ET D
Sbjct: 3289 SCGSSHSIAWVLTDQ---------PTINNQEPVTFPTTKDPLGQMLLTFKSTITGLETTD 3339

Query: 584  Y----IPFCSKVT 592
                 +P CSK +
Sbjct: 3340 LSNYPVPSCSKTS 3352



 Score =  201 bits (511), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 194/386 (50%), Gaps = 18/386 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGKGW 247
            +Y WG N   Q+      K   P L    S +R ++   G+   F + + G +   G G 
Sbjct: 3955 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGA 4014

Query: 248  ---LGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LG+  T    +P  +  ++   V          H L ++SEG VYSWG G+ GKLGH
Sbjct: 4015 VGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4074

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN LS  RPKLI   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD + + 
Sbjct: 4075 GNRLSYDRPKLIEE-LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL 4133

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            TP L+  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4134 TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKIPMKI 4192

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E+L    V KV  G+ FSVALT  G ++ WG G        +      P  V  L   +I
Sbjct: 4193 ESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4252

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A +   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4253 ISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGS 4311

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVDV 560
              ++A++   +  +   A TP+  D+
Sbjct: 4312 AHTLAWSTMKATQSKMPATTPMEYDL 4337



 Score =  173 bits (438), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/441 (32%), Positives = 208/441 (47%), Gaps = 39/441 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +T +  VYSWG G+ G+LGHG+      PKLI   L  K +T ++ G ++SAA++ 
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEA-LVEKNITFIACGSTYSAALSS 574

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
           +G LYTWG G++GRLGHG+  +   PTLVT L+   V  V+C  G+S TL ++  G  V+
Sbjct: 575 NGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASG-IVF 633

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
           S G GN GKLG        TPK+++ L    V KV  G  FS ALT  G V+ WG G   
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAY 693

Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                +      P ++  L + ++ ++ +G+ HVLAL++   +Y WG N  GQ       
Sbjct: 694 RLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI-DPALG 752

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
             V +P+    L    V  +  G   S A+     + A   AF    VD+   TF L+  
Sbjct: 753 TVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTSAWSVANRVAFV---VDICEETFRLLDT 809

Query: 571 FLEQYSACFETGDYIP-----FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNET 625
            L +  AC       P      C  V     I L L  + +H         S SV    T
Sbjct: 810 LLNK--ACEGLPSTRPPTQDRECLAVATLNLIRLQLHTMITH------NIDSKSVGLANT 861

Query: 626 AALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVVEQLDLLKTLLSQDH--- 678
             L  +  + V + +S +I   + +     L  G S+LLP   E+   L   LS+ +   
Sbjct: 862 PLLNSLKQRCVMLASSIDILATIQEAAQAVLQTGWSILLPTANERAKTLSNFLSKTNCNN 921

Query: 679 ----PLSNGQRMLLGVITSSL 695
                 SNGQ+ +  ++ SSL
Sbjct: 922 FEQINGSNGQQFMADLLVSSL 942



 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 132/275 (48%), Gaps = 14/275 (5%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            E  +L+    G +Y WG    G+LG       + P ++   L   R  Q++ G     AV
Sbjct: 3943 EDWMLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAV 4001

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T DG +Y  G G  GRLG G   S   PTL+  +  V     AV+ G  H L LS +GH 
Sbjct: 4002 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH- 4060

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            V+S G G+ GKLGH +      PK+IE L    +  +  G   S A+T  G ++ WG G 
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120

Query: 454  -----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                    S    TP L+  L  ++++DV+   GD+  L ++  + V++WG    G+ G+
Sbjct: 4121 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4180

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4181 GG-SDGCKIPMKIESLAGLGVVKVECGSQFSVALT 4214


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  216 bits (549), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/407 (36%), Positives = 209/407 (51%), Gaps = 56/407 (13%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
            V+ WG   H Q+ +  R         S  S  + +  GQ CTF++   G +L  G+G   
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPTTAPSF-SQAQQVVCGQNCTFVIQPNGTVLACGEGSYG 1182

Query: 247  WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG  N+  +  L     L+  +V+  V+ C S+ H + +T  GEV+SWG G++GKLGHG
Sbjct: 1183 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 1242

Query: 305  NTLSQRRPKLIMGGLYGKRVTQV-----------------------SAGHSHSAAVTEDG 341
            N+  QRRP+ I   L G+ V QV                       S G  HSA VT DG
Sbjct: 1243 NSDRQRRPRQIE-ALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADG 1301

Query: 342  LLYTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTVWS 396
             L+T+G GD+GRLG G+  ++  P  V      ++  V  V+CG +HTLV+S DG  VW+
Sbjct: 1302 KLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGLNHTLVVSADGMMVWA 1361

Query: 397  MGSGNLGKLGHEDTGKVTTPKV---------------IEALRKFRVRKVCAGTSFSVALT 441
             G G+ GKLG  ++   ++P+V               ++ L    ++KV  GT FSVALT
Sbjct: 1362 FGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSVALT 1421

Query: 442  WDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             DG VF +G    +GL  S    H  P  +  LS   + DV++G  H LALS   +VYAW
Sbjct: 1422 KDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAW 1481

Query: 497  GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP 543
            GSN+ GQ G  + +N V +P+ V  L+   + Q+ AG   S A+T P
Sbjct: 1482 GSNSEGQLGLGH-TNHVREPTVVTMLQGKHIHQVSAGRCHSAAWTAP 1527



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 67/333 (20%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL---GHGNTLSQRRPKLIMGGLY 320
            L+  I+S + S+  + H+     + +V+ WG G HG+L   G    +    P        
Sbjct: 1101 LDEQIMSWATSRPEDWHL---GGKCDVFLWGAGRHGQLAEAGRNILVPTTAPSF------ 1151

Query: 321  GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----A 376
              +  QV  G + +  +  +G +   GEG +GRLG G+    H  T+++ L         
Sbjct: 1152 -SQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLV 1210

Query: 377  VSCG-ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
             SCG + H++ L++ G  V+S G G+ GKLGH ++ +   P+ IEAL+   V +V  G +
Sbjct: 1211 TSCGSDGHSMALTESGE-VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRA 1269

Query: 436  -----------------------FSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
                                    S  +T DG +F +G      LGL ++S +   P  V
Sbjct: 1270 AGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTS-NKKLPERV 1328

Query: 467  TGLSSHQI---VDVSIGDSHVLALSQYN-EVYAWGSNTMGQCGQDNF---SNP------- 512
              L  +QI    +V+ G +H L +S     V+A+G    G+ G  N    S+P       
Sbjct: 1329 AALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVIL 1388

Query: 513  ----VDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                + Q  KV  L  + ++++  G+ FS+A T
Sbjct: 1389 QSPTLCQELKVDVLCGISIKKVACGTQFSVALT 1421


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  215 bits (547), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/411 (37%), Positives = 211/411 (51%), Gaps = 33/411 (8%)

Query: 182  DISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGG 239
            D     S VY WG N   Q+      K   P      S ++  HI  G    F++   G 
Sbjct: 3006 DTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGK 3065

Query: 240  LLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGV 295
            L   G+G    LGL +      PK +P  +  V   V+  S   H L +T +G+V+SWG 
Sbjct: 3066 LYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGE 3125

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            GE GKLGHGN +S  +PKLI   L  KR+  ++ G  HSAA+  +G LYTWG G++GRLG
Sbjct: 3126 GEDGKLGHGNCISLDKPKLIEV-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLG 3184

Query: 356  HGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            HGD  ++  P LV  L    V  V+CG  ++ T+ L+ DG+ V+S G G+ GKLG   + 
Sbjct: 3185 HGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGY-VYSWGDGDFGKLGRGGSD 3243

Query: 412  KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLV 466
               TP +++ L    V +V  G  FS+ALT  G V+ WG G   R    + H    P LV
Sbjct: 3244 GCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLV 3303

Query: 467  TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDV 525
             GL   +I+ V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +PS V  LED 
Sbjct: 3304 EGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTSVNRKPSLVHDLEDA 3361

Query: 526  CVRQICAGSLFSIAYTV--PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQ 574
             V ++  GS  SIA+ +   PSN            +  P TF  +R+ L Q
Sbjct: 3362 RVNRVSCGSSHSIAWVLVDQPSNG-----------NQDPVTFPTVRDPLGQ 3401



 Score =  194 bits (493), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 199/399 (49%), Gaps = 19/399 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYG--- 244
            +Y WG N   Q+      K   P      S +R I+   G+   F + + G +   G   
Sbjct: 3996 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYSTGYGA 4055

Query: 245  KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG+  T    +P  +  ++   +          H + ++SEG VYSWG G+ GKLGH
Sbjct: 4056 AGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN +S  RPKLI   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD   + 
Sbjct: 4116 GNKVSYDRPKLIED-LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL 4174

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P +V  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4175 RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKVPLKI 4233

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            ++L    V KV  G+ FSVALT  G V+ WG G        +      P  V  L   +I
Sbjct: 4234 DSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4293

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A S   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4294 ISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGS 4352

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVD-VRPHTFTLIREFL 572
              ++A++   +  +   A TP+  D V+  +++++R  L
Sbjct: 4353 AHTLAWSTAKATQSRMPASTPMEYDLVKDLSYSVLRNRL 4391



 Score =  187 bits (474), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 226/464 (48%), Gaps = 36/464 (7%)

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+RV       +++  S     H L +T +G VYSWG G+ G+LGHG+T+S   PKLI  
Sbjct: 557  PQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEA 616

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
             L  K +  ++ G ++SAA++ +G LYTWG G++GRLGHG+     TPTLVT L    V 
Sbjct: 617  -LLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVV 675

Query: 376  AVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+C  G+S TL ++  G  V+S G G+ GKLG   T    TPK+++ L    V KV  G
Sbjct: 676  HVACGSGDSQTLCVTASG-IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCG 734

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
            + FS ALT  G V+ WG G        S      P ++  L   ++ D+S+G +H+LAL+
Sbjct: 735  SQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALT 794

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNP-VDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP-SN 546
            +   VY WG N  GQ   D    P + +P+    L    V  + +G   S A+ +   S 
Sbjct: 795  EDQFVYGWGRNDYGQI--DPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFAWCMSAWSG 852

Query: 547  SALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRLLSS 606
             A   AF    VD+   TF L+   L +       G   P   +   A   L LLRL   
Sbjct: 853  GASRVAFV---VDICEETFQLLDTLLSKSCEGL-PGIRPPTQDRECLAVATLNLLRLQLH 908

Query: 607  HLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPP 662
             +    I A+S   L   +  L  +  + V++ ++  I   + +     L  G S+LLP 
Sbjct: 909  TMLTHNIDAKSVG-LATSSPLLNSLKQRCVNLASATGILATIQEAAQVVLQTGWSILLPT 967

Query: 663  VVEQLDLLKTLL-----------SQDHPLSNGQRMLLGVITSSL 695
              E+   L + L           S +  +++GQR +  ++ SSL
Sbjct: 968  ANERAKTLSSFLPNTSNNVEQSSSANIYINSGQRFMADLLVSSL 1011



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 131/277 (47%), Gaps = 18/277 (6%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            E   L+    G +Y WG    G+LG   G  +    P   +  L   R  Q++ G     
Sbjct: 3984 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSAL---RPIQLAGGEQTLF 4040

Query: 336  AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDG 391
            AVT DG +Y+ G G  GRLG G   S   PTL+  +  V     AVS G  H + LS +G
Sbjct: 4041 AVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 392  HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
            H V+S G G+ GKLGH +      PK+IE L    +  +  G   S A+T  G ++ WG 
Sbjct: 4101 H-VYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159

Query: 452  GL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQC 504
            G         S     P +V  L  ++++DV+   GD+  L ++  + V++WG    G+ 
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4219

Query: 505  GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G+   S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4220 GRGG-SDGCKVPLKIDSLAGLGVVKVECGSQFSVALT 4255


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/434 (35%), Positives = 219/434 (50%), Gaps = 41/434 (9%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            HS VY WG N   Q+      K   P    + S ++  HI  G    F++   G L   G
Sbjct: 3258 HSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG 3317

Query: 245  KG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL + +    PK +P L   ++          H L +T +G+++SWG GE GK
Sbjct: 3318 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGK 3377

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN++S  +P+LI   L  KR+  ++ G  HSAA+T  G LYTWG G++GRLGHGD  
Sbjct: 3378 LGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTA 3436

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    V  V+CG  ++ T+ L+ DG +V+S G G+ GKLG   +    TP
Sbjct: 3437 TQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTP 3495

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
             +I+ L    V ++  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3496 LLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG 3555

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             ++V V++G  H LA++   +VYAWG N  GQ  Q N S  V+ +PS V  L+D  V ++
Sbjct: 3556 KKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGSTIVNKKPSLVHELDDARVNRV 3613

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFET--------- 581
              GS  SIA+ +            P   +  P  F   ++ L Q S  F++         
Sbjct: 3614 SCGSSHSIAWVLTDQ---------PATNNQEPVMFPTEKDPLGQISLTFKSIVNHGTDTT 3664

Query: 582  ---GDYIPFCSKVT 592
               G  +P CS ++
Sbjct: 3665 DSNGCPVPSCSTIS 3678



 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 191/386 (49%), Gaps = 18/386 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW-- 247
            +Y WG N   Q+      K   P L    S +R ++       LL  T    VY  G+  
Sbjct: 4294 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGA 4353

Query: 248  ---LGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LG+  T    +P  +  ++   V          H L ++SEG VYSWG G+ GKLGH
Sbjct: 4354 AGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4413

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN L   RPKLI   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD + + 
Sbjct: 4414 GNRLMYDRPKLIEE-LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL 4472

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            TP LV  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4473 TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKIPMKI 4531

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E+L    V KV  G+ FSVALT  G ++ WG G        +      P  V  L   +I
Sbjct: 4532 ESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4591

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A +   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4592 ISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGS 4650

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVDV 560
              ++A++   +  +   A TP+  D+
Sbjct: 4651 AHTLAWSTMKATQSRMPATTPMEYDL 4676



 Score =  171 bits (432), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 216/458 (47%), Gaps = 30/458 (6%)

Query: 259 PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           P+RV       V++  S     H L +T +  VYSWG G+ G+LGHG+ +    PKL+  
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA 553

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
            L  K +T ++ G ++SA ++ +G LYTWG G++GRLGHG+  +   PTLVT L+   V 
Sbjct: 554 -LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVV 612

Query: 376 AVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
            V+C  G+S TL ++  G  V+S G GN GKLG        TPK+++ L    V KV  G
Sbjct: 613 HVACGSGDSQTLCVTASG-IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCG 671

Query: 434 TSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             FS ALT  G V+ WG G        +      P ++  L + ++ ++ +G+ HVLAL+
Sbjct: 672 GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALT 731

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
           +   VY WG N  GQ         V +P+    L    +  +  G   S A+     + A
Sbjct: 732 EDQLVYGWGRNDYGQI-DPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTSAWSVA 790

Query: 549 LSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRLLSSHL 608
              AF    VD+   TF L+   L +       G   P   +   A   L L+RL    +
Sbjct: 791 NRVAFV---VDICEETFRLLDTLLNKVCEGL-PGTRPPTQDRECLAVATLNLIRLQLHTM 846

Query: 609 YLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVV 664
               I ++S  +  + T  L  +  + V + +S  I   + +     L  G S+LLP   
Sbjct: 847 ITHNIDSKSVGL--SNTPLLSSLKQRCVTLASSSGILATIQEAAQAVLQTGWSILLPTAN 904

Query: 665 EQLDLLKTLLSQDH-------PLSNGQRMLLGVITSSL 695
           E+   L   LS+ +          NGQ+ +  ++ SSL
Sbjct: 905 ERAKTLSNFLSKANCSNFEQVNAGNGQQFMADLLVSSL 942



 Score =  123 bits (309), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 131/275 (47%), Gaps = 14/275 (5%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            E   L+    G +Y WG    G+LG       + P ++   L   R  Q++ G     AV
Sbjct: 4282 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLLAV 4340

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T DG +Y  G G  GRLG G   S   PTL+  +  V     AV+ G  H L LS +GH 
Sbjct: 4341 TADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH- 4399

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            V+S G G+ GKLGH +      PK+IE L    +  +  G   S A+T  G ++ WG G 
Sbjct: 4400 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459

Query: 454  -----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                    S    TP LV  L  ++++DV+   GD+  L ++  + V++WG    G+ G+
Sbjct: 4460 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4519

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4520 GG-SDGCKIPMKIESLAGLGVIKVECGSQFSVALT 4553


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 213/402 (52%), Gaps = 21/402 (5%)

Query: 164  TDIDSTSTPKLTYNIGDTDISVAH---SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN 220
            T+ DS + P  + +    D   ++   SKV  WG N   Q+      K   P   S+ S 
Sbjct: 2880 TENDSAAEPSYSTSSNYADEQSSNEISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQ 2939

Query: 221  IR--HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVS 274
            ++  HI  G    F++   G L   G+G    LGL +    P P++VP L   +V     
Sbjct: 2940 LKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAV 2999

Query: 275  KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
                 H + +T +G+V+SWG GE GKLGHGN ++  +PKL+   L  KR+  ++ G SHS
Sbjct: 3000 HSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLES-LRTKRIRDIACGSSHS 3058

Query: 335  AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCG--ESHTLVLSQD 390
            AA+T  G LYTWG G++GRLGHGD  ++  P LVT L    V  V+CG  ++ TL L+++
Sbjct: 3059 AAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEE 3118

Query: 391  GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            G  V+S G G+ GKLG   +   + P  +E L    V ++  G  FS+ALT  G V+ WG
Sbjct: 3119 G-LVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWG 3177

Query: 451  LG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             G        +      P  + GL   +++ V++G  H LA++   +V+AWG N  GQ G
Sbjct: 3178 KGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3237

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
              N +    +P+ V+GL+ V V ++  GS  S+A+++P + S
Sbjct: 3238 SGN-TVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSLPQNPS 3278



 Score =  181 bits (458), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 217/438 (49%), Gaps = 28/438 (6%)

Query: 259 PKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           PK V  LE   V    + C   H + ++S GEVYSWG GE G+LGHG+T S+  P  I  
Sbjct: 568 PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA- 626

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS----- 372
               K+VT + AG S+SAAV+  G L+TWG G +GRLGHG+   +  PT V  L      
Sbjct: 627 --LEKQVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVV 684

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
           DV A+  G++H++ ++ DG  +++ G G+ GKLG+        P  IE +    V ++ +
Sbjct: 685 DV-ALGSGDAHSMAVT-DGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSS--VARIYS 740

Query: 433 GTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G+ FSVAL++DG ++ WG G        +S   + P LV  L   +IVDV++G +H LAL
Sbjct: 741 GSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLAL 800

Query: 488 SQYNEVYAWGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           +   E+Y WG N   Q C      +P+     +     + +  +  G+  SI +    S+
Sbjct: 801 TSSGELYGWGRNDYQQICPSGVSRDPIITTPLLTTPPTLRISGMTCGAAQSIVWCA--SS 858

Query: 547 SALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGD--YIPFCSKVTHAQFILLLLRLL 604
           +   ++  P  VD+  HTF  + + L         GD  + P       A   L LLRL 
Sbjct: 859 TLGVASKIPFVVDLSEHTFRQLDQLLCMVCPGTGPGDIRHPPSQEAECIAVASLNLLRLQ 918

Query: 605 SSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLL 660
              + +  + AR+  ++   +  L  +  +++ +   P +   + +     L +G S+LL
Sbjct: 919 LHAMIVNNVPARAVGLV-EGSRLLASLKSRILTLAGGPVVLKTMQEAAQWTLQVGWSILL 977

Query: 661 PPVVEQLDLLKTLLSQDH 678
           P   E+   L +LL   H
Sbjct: 978 PTASERAQTLTSLLPVGH 995



 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 136/281 (48%), Gaps = 29/281 (10%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++S+GEV+SWG GE GKLGHGN  S  RPKLI   L G  V  ++ G +HSA +T 
Sbjct: 4042 HCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE-ALSGIGVVDIACGSAHSACITS 4100

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
             G + TWG+G +GRLGHGD + +  P      +    + CG   T +++           
Sbjct: 4101 QGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRT---TIMCGVGVTAIMA----------- 4146

Query: 400  GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LR 454
                 L  E      +P  IE+L    V KV  G+ FSVALT  G V+ WG G       
Sbjct: 4147 ----SLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH 4202

Query: 455  SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             ++     P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D     + 
Sbjct: 4203 GNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG-DGTVTAIQ 4261

Query: 515  QPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
            +P  V  L+   + ++  GS    A+T+  S   LS A  P
Sbjct: 4262 RPRLVQSLQGKHIVKVICGS----AHTLALSTYQLSEAVRP 4298



 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 122/222 (54%), Gaps = 10/222 (4%)

Query: 234 LDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV 290
           L S G +  +G G    LG  +T  + +P ++ LE  + ++       A    V+S GE+
Sbjct: 594 LSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYAGASYSA---AVSSVGEL 650

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGE 348
           ++WG G +G+LGHGN+  +  P  +   L   +V  V+  +G +HS AVT+ GLL+ WG+
Sbjct: 651 FTWGRGTYGRLGHGNSDDKFVPTQVQA-LKAYKVVDVALGSGDAHSMAVTDGGLLFAWGD 709

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
           GD G+LG+G       P  +  +S V  +  G   ++ LS DG T++S G G+ G+LGH 
Sbjct: 710 GDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYDG-TLYSWGKGHGGRLGHG 768

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           ++     PK++ AL   ++  V  G++  +ALT  G ++ WG
Sbjct: 769 NSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 201/372 (54%), Gaps = 20/372 (5%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            HS VY WG N   Q+      K   P    + S ++  HI  G    F++   G L   G
Sbjct: 2789 HSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACG 2848

Query: 245  KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL + +    PK +P  +  V   V+  S   H L +T +G+V+SWG GE GK
Sbjct: 2849 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2908

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN++S  +P+LI   L  KR+  ++ G  HSAA+T  G LYTWG G++GRLGHGD  
Sbjct: 2909 LGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTA 2967

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    V  ++CG  ++ T+ L+ DG  V+S G G+ GKLG   +    TP
Sbjct: 2968 TQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADG-LVYSWGDGDFGKLGRGGSDGCYTP 3026

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
             +I+ L    V ++  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3027 LLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG 3086

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             +I+ V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +PS V  L+D  V ++
Sbjct: 3087 KKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQ--QGNGTTIVNKKPSLVHELDDARVNRV 3144

Query: 531  CAGSLFSIAYTV 542
              GS  SIA+ +
Sbjct: 3145 SCGSSHSIAWVL 3156



 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 194/386 (50%), Gaps = 18/386 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGKGW 247
            +Y WG N   Q+      K   P L    S +R ++   G+   F + + G +   G G 
Sbjct: 3786 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGA 3845

Query: 248  ---LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LG+  T    +P  +  ++   V          H L ++SEG VYSWG G+ GKLGH
Sbjct: 3846 VGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 3905

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN LS  RPKLI   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD + + 
Sbjct: 3906 GNRLSYDRPKLIEE-LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL 3964

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            TP L+  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 3965 TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKIPMKI 4023

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E+L    V KV  G+ FSVALT  G ++ WG G        +      P  V  L   +I
Sbjct: 4024 ESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4083

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A +   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4084 ISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGS 4142

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVDV 560
              ++A++   +  +   A TP+  D+
Sbjct: 4143 AHTLAWSTMKATQSKMPATTPMEYDL 4168



 Score =  169 bits (428), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 209/454 (46%), Gaps = 41/454 (9%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +++  S     H L +T +  VYSWG GE G+LGHGN      PKLI   L  K +T ++
Sbjct: 502 ITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEA-LVEKNITFIA 560

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSD--VGAVSCG---ES 382
            G ++SAA++ +G LYTWG G++G+LGHG+  K    PTLVT L+   V  V+CG   + 
Sbjct: 561 CGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            TL ++  G  V+S G GN GKLG        TPK+++ L    V KV  G  FS ALT 
Sbjct: 621 QTLCVTASG-IVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679

Query: 443 DGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+ WG G        +      P ++  L + +I D+ IG  HVLAL++   VY WG
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
            N  GQ         V +P+         V  +  G   S A+     + A   AF    
Sbjct: 740 RNDHGQI-DPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAAWSVANRVAFV--- 795

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIP-----FCSKVTHAQFILLLLRLLSSHLYLAL 612
           VD+   TF L+   L +  AC       P      C  V     I L L  + +H     
Sbjct: 796 VDICEETFRLLDTLLNK--ACEGLPSTRPPTQDRECLAVATLNLIRLQLHTMITH----- 848

Query: 613 IGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVVEQLD 668
               S SV    T  L  +  + V + +S +I   + +     L  G S+LLP   E+  
Sbjct: 849 -NIDSKSVGLANTPLLNSLKQRCVMLASSIDILATIQEAAQAVLQTGWSILLPTANERAK 907

Query: 669 LLKTLLSQDH-------PLSNGQRMLLGVITSSL 695
            L   LS+ +         +NGQ+ +  ++ SSL
Sbjct: 908 TLSNFLSKTNYNNFEQINGNNGQQFMADLLVSSL 941



 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 132/275 (48%), Gaps = 14/275 (5%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            E  +L+    G +Y WG    G+LG       + P ++   L   R  Q++ G     AV
Sbjct: 3774 EDWMLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAV 3832

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T DG +Y  G G  GRLG G   S   PTL+  +  V     AV+ G  H L LS +GH 
Sbjct: 3833 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH- 3891

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            V+S G G+ GKLGH +      PK+IE L    +  +  G   S A+T  G ++ WG G 
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951

Query: 454  -----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                    S    TP L+  L  ++++DV+   GD+  L ++  + V++WG    G+ G+
Sbjct: 3952 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4011

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4012 GG-SDGCKIPMKIESLAGLGVIKVECGSQFSVALT 4045


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 166/483 (34%), Positives = 234/483 (48%), Gaps = 38/483 (7%)

Query: 181  TDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTG 238
            TD     S VY WG N   Q+      K   P    + S ++  HI  G    F++   G
Sbjct: 2582 TDTPPQQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEG 2641

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWG 294
             L   G+G    LGL +      PK +P  +  V   V+  S   H L +T +G+V+SWG
Sbjct: 2642 KLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 2701

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             GE GKLGHGN +S  +PKLI   L  KR+  ++ G  HSAA+  +G LYTWG G++GRL
Sbjct: 2702 EGEDGKLGHGNCISLDKPKLIEI-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 2760

Query: 355  GHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            GHGD  ++  P LV  L    V  V+CG  ++ T+ L+ DG  V+S G G+ GKLG   +
Sbjct: 2761 GHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDG-CVYSWGDGDFGKLGRGGS 2819

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVL 465
                TP  ++ L    V +V  G  FS+ALT  G V+ WG G   R    + H    P L
Sbjct: 2820 DGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTL 2879

Query: 466  VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLED 524
            V GL   +I+ V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +PS V  LED
Sbjct: 2880 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGATSVNRKPSLVHDLED 2937

Query: 525  VCVRQICAGSLFSIAYTV--PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETG 582
              V ++  GS  SIA+ +   PSN        P   D        +    EQ  A   T 
Sbjct: 2938 ARVNRVSCGSSHSIAWVLVDQPSNGNQDPVTFPTVRDPLGQMCLGLNNAPEQNGAVATTS 2997

Query: 583  DYIPFCSKVTHAQFIL--------------LLLRLLSSHLYLALIGARSSSVLGNETAAL 628
            D +   ++ + A  IL              ++  LL     +A++ A  S  + N  A++
Sbjct: 2998 DVV--ATRPSLASIILSLESNVAKQQALQHVINALLIMQARVAIVTALQSHSMLNGCASM 3055

Query: 629  RHV 631
            +H 
Sbjct: 3056 KHA 3058



 Score =  184 bits (466), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 150/453 (33%), Positives = 218/453 (48%), Gaps = 35/453 (7%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +++  S     H L +T +G VYSWG G+ G+LGHG+T+S   PKLI   L  K +  ++
Sbjct: 147 ITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIES-LLDKNIVFIA 205

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHT 384
            G ++SAA++  G LYTWG G++GRLGHG+     TPTLVT L    V  V+C  G+S T
Sbjct: 206 CGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQT 265

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L ++  G  V+S G G+ GKLG   T    TPK+++ L    V KV  G  FS ALT  G
Sbjct: 266 LCVTASG-IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHG 324

Query: 445 LVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            V+ WG G        S      P ++  L   +I D+S+G +H+LAL++   VY WG N
Sbjct: 325 EVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRN 384

Query: 500 TMGQCGQDNFSNP-VDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP-SNSALSSAFTPLC 557
             GQ   D    P V +P+    L    V  + +G   S A+ +   S  A   AF    
Sbjct: 385 DYGQI--DPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFAWCMSAWSGGASRVAFV--- 439

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARS 617
           VD+   TF L+   L +       G   P   +   A   L LLRL    +    I  +S
Sbjct: 440 VDICEETFQLLDTLLSKSCEGL-PGIRPPTQDRECLAVATLNLLRLQLHTMLTHNIDTKS 498

Query: 618 SSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVVEQLDLLKTL 673
              L   +  L  +  + V++ +   I   + +     L  G S+LLP   E+   L + 
Sbjct: 499 VG-LATSSPLLSSLKQRCVNLASGTGILATIQEAAQAVLQTGWSILLPTANERAKTLSSF 557

Query: 674 L-----------SQDHPLSNGQRMLLGVITSSL 695
           L           S +  +++GQR +  ++ SSL
Sbjct: 558 LPNTSNNVEQSSSANMYINSGQRFMADLLVSSL 590


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 196/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3122

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3123 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3182

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  ++ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3183 GNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 3241

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LV  LS   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +   +TP  I
Sbjct: 3242 KPKLVAALSGRRVIQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSSTPHEI 3300

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL  H++
Sbjct: 3301 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRV 3360

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3361 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVIVNRVACG 3418

Query: 534  SLFSIAYTVP 543
            S  S+A+ +P
Sbjct: 3419 SSHSMAWGLP 3428



 Score =  184 bits (468), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T++GEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4312 HCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITA 4370

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4371 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4429

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4430 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4489

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D   
Sbjct: 4490 RLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG-DGTV 4548

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4549 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4602

Query: 571  F 571
             
Sbjct: 4603 L 4603



 Score =  162 bits (411), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 210/444 (47%), Gaps = 31/444 (6%)

Query: 273  VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
             + C   H L V S    YSWGVG+  +LGHG+  ++  P  I   +  + V  V  G S
Sbjct: 650  AAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLV--RLVKSVYCGCS 707

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
            +SAA+T  G LYTWG G +GRLGHG    +  P +V  L D      A+  G++HTL L+
Sbjct: 708  YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT 767

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             +G  V++ G G+ GKLG+        P++I+ L   RV++V AG  FS+AL+ +G ++ 
Sbjct: 768  SEG-LVFAWGDGDYGKLGNGSCNSSLLPQLIDCLP--RVQRVFAGAQFSLALSCEGQLYS 824

Query: 449  WG----LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            WG    LG   +  +      P L+TGL   +IVDV++G +H LALS   E++ WG N  
Sbjct: 825  WGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDN 884

Query: 502  GQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDV 560
             Q C     S P+ +    V L  +    I   +  S+ +T          A  P  +D+
Sbjct: 885  QQICPASVCSEPLLRQPIQVTLPTLPASGIACTAAQSLIWTQSTRQGVPLRA--PFVIDL 942

Query: 561  RPHTFTLIREFLEQYSACF-----ETGDYIPFCSKVTHAQFILL-LLRLLSSHLYLALIG 614
               TF L+ + L   SA       +T +    C  V     + L LL L+++ +    +G
Sbjct: 943  GEPTFRLLDQLLGMCSASTAQDNRQTPNQESECIAVACLNLVRLQLLALIANGVEPRTVG 1002

Query: 615  ARSSSVLGNETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTL 673
              S   L N   +L+  +  L    +    I+      L  G S+LLP   E+   L  L
Sbjct: 1003 LASGGRLLN---SLKTRILSLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTAL 1059

Query: 674  LSQD--HPLSNGQRMLLGVITSSL 695
            L  +     S G R +  ++ SSL
Sbjct: 1060 LPSEPGQACSPGHRFMTDLLVSSL 1083



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 120/237 (50%), Gaps = 17/237 (7%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
           H E   F    +DS      +G G    LG  +   + LP ++  E+ +  +    C  +
Sbjct: 652 HCEGRHF--LAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKI--ESLVRLVKSVYCGCS 707

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAV 337
           +   +T  G +Y+WG G +G+LGHG +  Q  P ++M  L   +V  V+  +G +H+  +
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMA-LKDHQVVDVALGSGDAHTLCL 766

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           T +GL++ WG+GD+G+LG+G   S   P L+  L  V  V  G   +L LS +G  ++S 
Sbjct: 767 TSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFAGAQFSLALSCEGQ-LYSW 825

Query: 398 GSGNLGKLGHE----DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  +   LGH+    +    + P++I  L+  R+  V  G +  +AL+  G +F WG
Sbjct: 826 GKASC--LGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 198/374 (52%), Gaps = 20/374 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3108 GNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 3166

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LVT L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3167 KPKLVTALAGRRVVQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 3225

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3226 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 3285

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3286 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3343

Query: 534  SLFSIAYTVPPSNS 547
            S  SIA+ +P ++S
Sbjct: 3344 SSHSIAWGLPNASS 3357



 Score =  186 bits (473), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4147 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITA 4205

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4206 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4264

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4265 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH 4324

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4325 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 4383

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4384 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4437

Query: 571  F 571
             
Sbjct: 4438 L 4438



 Score =  148 bits (374), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 219/496 (44%), Gaps = 71/496 (14%)

Query: 262  VPLEAAIVSLSVSKCSEAHVLTVTSEGEV------------------------------- 290
            VP  +    +    C E  +L ++ EG++                               
Sbjct: 565  VPTLSCRFQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHDVFISIAGHCE 624

Query: 291  -------------YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
                         YSWG GE  +LGHG+T ++  P  I   L    V  V  G S+SAA+
Sbjct: 625  GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAI 683

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T  G L TWG G + RLGHG+   R  PTLV  LSD      A+  G++H+L L+ +G  
Sbjct: 684  TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG-L 742

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
            V++ G G+ GKLG+ +      P ++E+L   RV++V AG+ FSVAL+ +G ++ WG   
Sbjct: 743  VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKAT 800

Query: 451  -LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CG 505
             LG   +  S      P LV+ L   +IVDV++  +H LALS   EV+ WG N   Q C 
Sbjct: 801  CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP 860

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
                S P+ +   +V L       I   S  S+ +T          A  P  VD+   TF
Sbjct: 861  ASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQSSHQGVPRRA--PFVVDLGEPTF 918

Query: 566  TLIREFLEQYSA--CFETGDYIPFCSKVTHAQ-FILLLLRLLSSHLYLALIGARSSSVLG 622
             L+ + L   S+    +T +    C  V     F L LL L+++ +    +G  S S L 
Sbjct: 919  RLLDQLLGMCSSQDNRQTPNQESECIAVACLNLFRLQLLALIANGVEPRQVGLASGSRL- 977

Query: 623  NETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD--HP 679
                +L+  +  L    +    I+      L  G S+LLP   E+   L +LL  +    
Sbjct: 978  --LCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPGQA 1035

Query: 680  LSNGQRMLLGVITSSL 695
             S G R +  ++ SSL
Sbjct: 1036 SSAGHRFMTDLLVSSL 1051



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 176/415 (42%), Gaps = 73/415 (17%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLP----------SNIRHIEAGQFCTFLLDSTG 238
           K+YTW              + ++P  + LP          S   H E   F    +DS  
Sbjct: 592 KLYTW--------------RLAKPEAEPLPMEEVAHDVFISIAGHCEGRHF--LAIDSNH 635

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
               +G G    LG  +T  + +P ++  LE   V      CS  +   +T  G + +WG
Sbjct: 636 NAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS--YSAAITCGGNLLTWG 693

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHG 352
            G + +LGHGN+  +  P L++  L    V  V+  +G +HS A+T +GL++ WG+GD+G
Sbjct: 694 RGTYARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752

Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHE--- 408
           +LG+G+      P LV  L  V  V  G   ++ LS +G    W    G    LGH+   
Sbjct: 753 KLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTW----GKATCLGHQLVE 808

Query: 409 -DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS---- 459
                 + P+++ +L+  R+  V    +  +AL+  G VF WG      +  +S+S    
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPL 868

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE---------VYAWGSNT-------MGQ 503
             TP+LV+ L +     ++   +  L  +Q +          V   G  T       +G 
Sbjct: 869 LRTPILVS-LPTFPASGIACTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTFRLLDQLLGM 927

Query: 504 C-GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
           C  QDN   P +Q S+ + +   C+       L  IA  V P    L+S    LC
Sbjct: 928 CSSQDNRQTP-NQESECIAV--ACLNLFRLQLLALIANGVEPRQVGLASGSRLLC 979


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
           niloticus]
          Length = 4833

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 179/536 (33%), Positives = 260/536 (48%), Gaps = 50/536 (9%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           +V  WG  L  ++   V G      L SL   +  I   +    +L S+G   VY + + 
Sbjct: 415 EVIAWGL-LGWKLYANVNGPIQCKALSSL--GVTQIVCSEKGFLILSSSGA--VYSQNY- 468

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
              +TT+ P+   V     IV L+     + H L ++S GEV+SWG G+ G+LGHG+T  
Sbjct: 469 --KSTTLAPMLIHVLSSRKIVKLAAHPDGQ-HYLALSSNGEVFSWGCGDGGRLGHGDTTY 525

Query: 309 QRRPKLIM---GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              PK+I    G   GK V  V+ G ++SAA+T DG LYTWG G++GRLGHG  + + TP
Sbjct: 526 LEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTP 585

Query: 366 TLVTELS--DVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            +VT      V  V+CG  ++ TL ++++G  VWS G G+ GKLG   +    TPK++E 
Sbjct: 586 MVVTAFKGLKVVDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLVEK 644

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVD 476
           L+   + KVC G+ FSVALT DG V+ WG G        +      P L+  L   ++VD
Sbjct: 645 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD 704

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           V++G +H LAL+   EV +WGSN   Q     FSN   QP  + GL    +  I  G   
Sbjct: 705 VAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNK-KQPKALPGLNSKHIVGISCGPGQ 763

Query: 537 SIAYTVPPSNSALS-SAFTPLCVDVRPHTFTLIREFLEQYSACFE-TGDYIPFCSKVTHA 594
           S A++   S+S  S     P  VDV P TF  +   L Q S   + + D+ P   K    
Sbjct: 764 SFAWS---SSSEWSVGKRVPFVVDVCPMTFEQLDLLLRQVSEGMDGSSDWPPPQEKECMV 820

Query: 595 QFILLLLRLLSSHLYLALIGARSSSVLGNETAA---------LRHVLFKLV-DMETSPEI 644
              L LLRL    L+ A+    S+ V   E            L+  +  L  +      +
Sbjct: 821 VATLNLLRL---QLHAAI----SNQVDPEELGLGLGSVLLNNLKQTVVVLASNAGVLNTV 873

Query: 645 ETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQDHPLSNGQRMLLGVITSSL 695
           +      L  G S+LLP   E+   L +LL       +  +S G+R ++ ++ SSL
Sbjct: 874 QAAAQAVLQSGWSVLLPTAEERARALSSLLPNAASGNEMSVSPGRRFMIDLLVSSL 929



 Score =  194 bits (493), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/403 (33%), Positives = 206/403 (51%), Gaps = 25/403 (6%)

Query: 159  SSNSNTDIDSTSTPKLTYNI--GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS 216
            S N   D + T+   L      G    +   +KV+ WG N   Q+      K   P    
Sbjct: 2925 SDNEEEDDEKTAAGSLARKKPSGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSE 2984

Query: 217  LPS--NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRV-PLEAAI 268
              S  N+  +  G    F +   G +   G+       LGL++ TI P+P+++  L   +
Sbjct: 2985 TLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTI-PIPRQITALSNYV 3043

Query: 269  VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
            +          H + +T +G+V+SWG G+ GKLGH + ++  +P+LI   L  KR+  ++
Sbjct: 3044 IKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3102

Query: 329  AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHT 384
             G SHSAA+T  G LY+WG G++GRLGHGD  ++  P LV  L    V  V+CG  ++ T
Sbjct: 3103 CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQT 3162

Query: 385  LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            L L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G
Sbjct: 3163 LALTDEGF-VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 3221

Query: 445  LVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            +V+ WG G        + +    P +V GL   +IV V++G  H LA++   +VYAWG N
Sbjct: 3222 VVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3281

Query: 500  TMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
              GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3282 DHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3322



 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4049 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITA 4107

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  V+C  G++ TL L+ D   VW
Sbjct: 4108 SGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDD-DMVW 4166

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4167 SWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4226

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4227 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4285

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+    A  P+
Sbjct: 4286 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPM 4332



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3952 TIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4011

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4012 AGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4071

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L  V V  I AG   S   T 
Sbjct: 4072 HGNRS-PCDRPRVIESLRGVEVVDIAAGGAHSACITA 4107


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/380 (37%), Positives = 206/380 (54%), Gaps = 23/380 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            HS VY WG N   Q+      K   P    + S ++  HI  G    F++   G L   G
Sbjct: 3253 HSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG 3312

Query: 245  KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL + +    PK +P  +  +   V+  S   H L +T +G+++SWG GE GK
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK 3372

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN++S  +P+LI   L  KR+  ++ G  HSAA+T  G LYTWG G++GRLGHGD  
Sbjct: 3373 LGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTA 3431

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    V  V+CG  ++ T+ L+ DG +V+S G G+ GKLG   +    TP
Sbjct: 3432 TQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTP 3490

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
             +I+ L    V ++  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3491 LLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG 3550

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             ++V V++G  H LA++   +VYAWG N  GQ  Q N S  V+ +PS V  L+D  V ++
Sbjct: 3551 KKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGSTIVNKKPSLVHELDDARVNRV 3608

Query: 531  CAGSLFSIAYTV---PPSNS 547
              GS  SIA+ +   P +N+
Sbjct: 3609 SCGSSHSIAWVLTDQPATNN 3628



 Score =  198 bits (504), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 191/386 (49%), Gaps = 18/386 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW-- 247
            +Y WG N   Q+      K   P L    S +R ++       LL  T    VY  G+  
Sbjct: 4261 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGA 4320

Query: 248  ---LGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LG+  T    +P  +  ++   V          H L ++SEG VYSWG G+ GKLGH
Sbjct: 4321 AGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4380

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN L   RPKLI   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD + + 
Sbjct: 4381 GNRLMYDRPKLIEE-LLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL 4439

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            TP LV  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4440 TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKIPMKI 4498

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E+L    V KV  G+ FSVALT  G ++ WG G        +      P  V  L   +I
Sbjct: 4499 ESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4558

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A +   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4559 ISIATGSLHCVACTDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGS 4617

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVDV 560
              ++A++   +  +   A TP+  D+
Sbjct: 4618 AHTLAWSTMKATQSRMPATTPMEYDL 4643



 Score =  171 bits (434), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 216/458 (47%), Gaps = 30/458 (6%)

Query: 259 PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           P+RV       V++  S     H L +T +  VYSWG G+ G+LGHG+ +    PKL+  
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA 545

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
            L  K +T ++ G ++SA ++ +G LYTWG G++GRLGHG+  +   PTLVT L+   V 
Sbjct: 546 -LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVV 604

Query: 376 AVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
            V+C  G+S TL ++  G  V+S G GN GKLG        TPK+++ L    V KV  G
Sbjct: 605 YVACGSGDSQTLCVTASG-IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCG 663

Query: 434 TSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             FS ALT  G V+ WG G        +      P ++  L   ++ ++ +G+ HVLAL+
Sbjct: 664 GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALT 723

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
           +   VY WG N  GQ         V +P+    L    +  +  G   S A+     + A
Sbjct: 724 EDQLVYGWGRNDYGQI-DPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTSAWSVA 782

Query: 549 LSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRLLSSHL 608
              AF    VD+   TF L+   L +       G   P   +   A   L L+RL    +
Sbjct: 783 NRVAFV---VDICEETFRLLDTLLNKVCEGL-PGTRPPTQDRECLAVATLNLIRLQLHTM 838

Query: 609 YLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVV 664
               I ++S  +  + T  L  +  + V + +S  I   + +     L  G S+LLP   
Sbjct: 839 ITHNIDSKSVGL--SNTPLLSSLKQRCVTLASSSGILATIQEAAQAVLQTGWSILLPTAN 896

Query: 665 EQLDLLKTLLSQDH-------PLSNGQRMLLGVITSSL 695
           E+   L   LS+ +         SNGQ+ +  ++ SSL
Sbjct: 897 ERAKTLSNFLSKANCSSFEQVNASNGQQFMADLLVSSL 934



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 131/275 (47%), Gaps = 14/275 (5%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            E   L+    G +Y WG    G+LG       + P ++   L   R  Q++ G     AV
Sbjct: 4249 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLLAV 4307

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T DG +Y  G G  GRLG G   S   PTL+  +  V     AV+ G  H L LS +GH 
Sbjct: 4308 TADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH- 4366

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            V+S G G+ GKLGH +      PK+IE L    +  +  G   S A+T  G ++ WG G 
Sbjct: 4367 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426

Query: 454  -----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                    S    TP LV  L  ++++DV+   GD+  L ++  + V++WG    G+ G+
Sbjct: 4427 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4486

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4487 GG-SDGCKIPMKIESLAGLGVIKVECGSQFSVALT 4520


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 153/404 (37%), Positives = 207/404 (51%), Gaps = 29/404 (7%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
             S VY WG N   Q+      K   P    + S ++  HI  G    F++   G L   G
Sbjct: 2960 ESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACG 3019

Query: 245  KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL +      PK +P  +  V   V+  S   H L +T +G+V+SWG GE GK
Sbjct: 3020 EGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 3079

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN +S  +PKLI   L  KR+  ++ G  HSAA+  +G LYTWG G++GRLGHGD  
Sbjct: 3080 LGHGNNMSLDKPKLIET-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTV 3138

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    V  V+CG  ++ T+ L+ DG  V+S G G+ GKLG   +    TP
Sbjct: 3139 TQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDG-CVYSWGDGDFGKLGRGGSDGCYTP 3197

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
             V+E L    V +V  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3198 LVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG 3257

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +PS V  LED  V ++
Sbjct: 3258 KKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTSVNRKPSLVHELEDARVNRV 3315

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQ 574
              GS  SIA+ +            P   +  P TF   R+ L Q
Sbjct: 3316 SCGSSHSIAWVL---------VDQPSSGNQEPVTFPTARDPLGQ 3350



 Score =  195 bits (495), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 199/399 (49%), Gaps = 19/399 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYG--- 244
            +Y WG N   Q+      K   P      S +R I+   G+   F + + G +   G   
Sbjct: 3945 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGA 4004

Query: 245  KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG+  T    +P  +  ++   +          H L ++SEG VYSWG G+ GKLGH
Sbjct: 4005 AGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH 4064

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN +S  RPKLI   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD   + 
Sbjct: 4065 GNKMSYDRPKLIED-LLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL 4123

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P +V  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4124 RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKVPLKI 4182

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            ++L    V KV  G+ FSVALT  G V+ WG G        +      P  V  L   +I
Sbjct: 4183 DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4242

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A S   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4243 ISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTSALHRPRLVHALQGKKITRVACGS 4301

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVD-VRPHTFTLIREFL 572
              ++A++   +  +   A TP+  D V+  +++++R  L
Sbjct: 4302 AHTLAWSTAKATQSRMPASTPMEYDLVKDLSYSVLRNRL 4340



 Score =  182 bits (462), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 152/468 (32%), Positives = 228/468 (48%), Gaps = 44/468 (9%)

Query: 259 PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           P+RV      +V++  S     H L +T +G VYSWG G+ G+LGHG+T+S   PKLI  
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEA 557

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
            L  K +  ++ G ++SAA++  G LYTWG G++GRLGHG+      PTLVT L    V 
Sbjct: 558 -LLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVV 616

Query: 376 AVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
            V+C  G+S TL ++  G  V+S G G+ GKLG   T    TPK+++ L    V KV  G
Sbjct: 617 HVACGSGDSQTLCVTASG-IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCG 675

Query: 434 TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
           + FS ALT  G V+ WG G        S      P ++  L   +I D+S+G +H+L L+
Sbjct: 676 SQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLT 735

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP-SNS 547
           +   VY WG N  GQ       + + +P+    L    V  + +G   S A+ +   S  
Sbjct: 736 EDQFVYGWGRNDYGQI-DPTLGSVISEPTLCPTLSSKTVIGLASGPTQSFAWCMSAWSGG 794

Query: 548 ALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRL---- 603
           A   AF    VD+   TF L+   L +       G   P   +   A   L LLRL    
Sbjct: 795 ASRVAFV---VDICEETFQLLDTLLAKSCEGL-PGIRPPTQDRECLAVATLNLLRLQLHT 850

Query: 604 -LSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASL 658
            L+ ++    +G  +SS L N   +L+    + V++ ++  I   + +     L  G S+
Sbjct: 851 MLTHNIDTKSVGLAASSPLLN---SLKQ---RCVNLASATGILATIQEAAQAVLQTGWSI 904

Query: 659 LLPPVVEQLDLLKTLL-----------SQDHPLSNGQRMLLGVITSSL 695
           LLP   E+   L + L           S +  +++GQR +  ++ SSL
Sbjct: 905 LLPTANERAKTLSSFLPNTSNNMEQSGSTNIYINSGQRFMADLLVSSL 952



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 148/322 (45%), Gaps = 66/322 (20%)

Query: 283  TVTSEGEVYSWGVGEHGKLG-----------HGNTLSQRRPKLIMGG------------L 319
            T   E  VY WG+ +  +LG           +   LS+ +P  I GG            L
Sbjct: 2956 TPPQESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKL 3015

Query: 320  YG-------------------------------KRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            Y                                K+V  V +G  H+ A+T+DG +++WGE
Sbjct: 3016 YACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVA-VHSGGKHALALTQDGKVFSWGE 3074

Query: 349  GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            G+ G+LGHG+  S   P L+  L    +  ++CG  H+  ++ +G  +++ G G  G+LG
Sbjct: 3075 GEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGE-LYTWGLGEYGRLG 3133

Query: 407  HEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLG-----LRSSSIS 459
            H DT     PK+++ L   RV +V  G+  + ++ALT DG V+ WG G      R  S  
Sbjct: 3134 HGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDG 3193

Query: 460  FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
             +TP++V  L+   +V V  G    LAL++Y EV+ WG     + G  N  + V +P+ V
Sbjct: 3194 CYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN-DHHVRKPTLV 3252

Query: 520  VGLEDVCVRQICAGSLFSIAYT 541
             GL    +  +  G+L  +A T
Sbjct: 3253 EGLRGKKIVHVAVGALHCLAVT 3274



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 131/277 (47%), Gaps = 18/277 (6%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            E   L+    G +Y WG    G+LG   G  +    P   +  L   R  Q++ G     
Sbjct: 3933 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSAL---RPIQLAGGEQTLF 3989

Query: 336  AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDG 391
            AVT DG +Y+ G G  GRLG G   S   PTL+  +  V     AVS G  H L LS +G
Sbjct: 3990 AVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 392  HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
            H V+S G G+ GKLGH +      PK+IE L    +  +  G   S A+T  G ++ WG 
Sbjct: 4050 H-VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108

Query: 452  GL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQC 504
            G         S     P +V  L  ++++DV+   GD+  L ++  + V++WG    G+ 
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4168

Query: 505  GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G+   S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4169 GRGG-SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT 4204



 Score = 90.5 bits (223), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 115/279 (41%), Gaps = 65/279 (23%)

Query: 326  QVSAGHSHSAAVTEDGLLYTWGEGD----------------------------------- 350
            QV+   S  A   ++  +Y WG  D                                   
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKT 3005

Query: 351  -----------------HGRLGHGDLKSRHTPTLVTELSDV----GAVSCGESHTLVLSQ 389
                             +GRLG GD  +   P  +  LS       AV  G  H L L+Q
Sbjct: 3006 LFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQ 3065

Query: 390  DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            DG  V+S G G  GKLGH +   +  PK+IE L+  R+R +  G+  S A+  +G ++ W
Sbjct: 3066 DGK-VFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTW 3124

Query: 450  GLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMG 502
            GLG         +++   P LV  L  H++V V+ G  D+  +AL+    VY+WG    G
Sbjct: 3125 GLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFG 3184

Query: 503  QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            + G+   S+    P  V  L  + V Q+  G+ FS+A T
Sbjct: 3185 KLGRGG-SDGCYTPLVVERLNGLGVVQVECGAQFSLALT 3222


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  214 bits (544), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 198/374 (52%), Gaps = 20/374 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 2702

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 2703 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 2762

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 2763 GNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 2821

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LVT L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 2822 KPKLVTALAGRRVVQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 2880

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 2881 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 2940

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 2941 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 2998

Query: 534  SLFSIAYTVPPSNS 547
            S  SIA+ +P ++S
Sbjct: 2999 SSHSIAWGLPNASS 3012



 Score =  147 bits (372), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 219/496 (44%), Gaps = 71/496 (14%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEV------------------------------- 290
           VP  +    +    C E  +L ++ EG++                               
Sbjct: 219 VPTLSCRFQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHDVFISIAGHCE 278

Query: 291 -------------YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
                        YSWG GE  +LGHG+T ++  P  I   L    V  V  G S+SAA+
Sbjct: 279 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAI 337

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
           T  G L TWG G + RLGHG+   R  PTLV  LSD      A+  G++H+L L+ +G  
Sbjct: 338 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG-L 396

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V++ G G+ GKLG+ +      P ++E+L   RV++V AG+ FSVAL+ +G ++ WG   
Sbjct: 397 VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKAT 454

Query: 451 -LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CG 505
            LG   +  S      P LV+ L   +IVDV++  +H LALS   EV+ WG N   Q C 
Sbjct: 455 CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP 514

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
               S P+ +   +V L       I   S  S+ +T          A  P  VD+   TF
Sbjct: 515 ASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQSSHQGVPRRA--PFVVDLGEPTF 572

Query: 566 TLIREFLEQYSA--CFETGDYIPFCSKVTHAQ-FILLLLRLLSSHLYLALIGARSSSVLG 622
            L+ + L   S+    +T +    C  V     F L LL L+++ +    +G  S S L 
Sbjct: 573 RLLDQLLGMCSSQDNRQTPNQESECIAVACLNLFRLQLLALIANGVEPRQVGLASGSRL- 631

Query: 623 NETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD--HP 679
               +L+  +  L    +    I+      L  G S+LLP   E+   L +LL  +    
Sbjct: 632 --LCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPGQA 689

Query: 680 LSNGQRMLLGVITSSL 695
            S G R +  ++ SSL
Sbjct: 690 SSAGHRFMTDLLVSSL 705



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 176/415 (42%), Gaps = 73/415 (17%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLP----------SNIRHIEAGQFCTFLLDSTG 238
           K+YTW              + ++P  + LP          S   H E   F    +DS  
Sbjct: 246 KLYTW--------------RLAKPEAEPLPMEEVAHDVFISIAGHCEGRHF--LAIDSNH 289

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
               +G G    LG  +T  + +P ++  LE   V      CS  +   +T  G + +WG
Sbjct: 290 NAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS--YSAAITCGGNLLTWG 347

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHG 352
            G + +LGHGN+  +  P L++  L    V  V+  +G +HS A+T +GL++ WG+GD+G
Sbjct: 348 RGTYARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 406

Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHE--- 408
           +LG+G+      P LV  L  V  V  G   ++ LS +G    W    G    LGH+   
Sbjct: 407 KLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTW----GKATCLGHQLVE 462

Query: 409 -DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS---- 459
                 + P+++ +L+  R+  V    +  +AL+  G VF WG      +  +S+S    
Sbjct: 463 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPL 522

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE---------VYAWGSNT-------MGQ 503
             TP+LV+ L +     ++   +  L  +Q +          V   G  T       +G 
Sbjct: 523 LRTPILVS-LPTFPASGIACTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTFRLLDQLLGM 581

Query: 504 C-GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
           C  QDN   P +Q S+ + +   C+       L  IA  V P    L+S    LC
Sbjct: 582 CSSQDNRQTP-NQESECIAV--ACLNLFRLQLLALIANGVEPRQVGLASGSRLLC 633


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  214 bits (544), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 195/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 2974 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3033

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  ++ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3034 GNRTTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 3092

Query: 364  TPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LVT L  S V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3093 KPKLVTALCGSRVIQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPHEI 3151

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3152 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRV 3211

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3212 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3269

Query: 534  SLFSIAYTVP 543
            S  S+A+ +P
Sbjct: 3270 SSHSMAWGLP 3279



 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T++GEVY+WG GE GKLGHGN LS  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4168 HCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLE-HLNGMSVADIACGSAHSAAITA 4226

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4227 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4285

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4286 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4345

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4346 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-DGTV 4404

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4405 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4458

Query: 571  F 571
             
Sbjct: 4459 M 4459



 Score =  161 bits (408), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 214/446 (47%), Gaps = 35/446 (7%)

Query: 273  VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
             S C   H L V +    YSWG G++ +LGHG+  S+  P  I   +  +RV  V  G S
Sbjct: 645  ASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLV--RRVKSVYCGCS 702

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
            +SAA+T  G LYTWG G++GRLGHG    +  PT+V  L D      A+  G++HTL L+
Sbjct: 703  YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT 762

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             +G  V++ G G+ GKLG+        P +IE L   RV++V AG+ FS+ALT +G ++ 
Sbjct: 763  NEG-LVYAWGDGDYGKLGNASCNSSLQPLLIECLP--RVQRVFAGSQFSLALTGEGQLYS 819

Query: 449  WG----LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            WG    LG   +  +      P L+T L   +IVDV++G +H LALS   E++ WG N  
Sbjct: 820  WGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDN 879

Query: 502  GQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDV 560
             Q C     S P+ +   +V L  +    +   ++ S+ +T          A  P  +D+
Sbjct: 880  QQICPASVCSEPLLRQPILVTLPTLPASGMACTAVQSLIWTQSSRQGVPLRA--PFVIDL 937

Query: 561  RPHTFTLIREFLEQYSACF-----ETGDYIPFCSKVTHAQFILL-LLRLLSSHLYLALIG 614
               TF L+ + L   SA       +T +    C  V     + L LL L+++ +    +G
Sbjct: 938  GEPTFRLLDQLLGMCSASTAQDNRQTPNQESECIAVACLNLVRLQLLALIANGVEPRNVG 997

Query: 615  ARSSSVLGNETAALRHVLFKLVDMETSPEIETLLTDCLAI---GASLLLPPVVEQLDLLK 671
              S   L N   +L+  +  L     S  + T+          G S+LLP   E+   L 
Sbjct: 998  LASGGRLLN---SLKTRILSLAG--GSQVLRTIQIAAQQAIQDGWSVLLPTAAERAQTLT 1052

Query: 672  TLLSQD--HPLSNGQRMLLGVITSSL 695
             LL  +     S G R +  ++ SSL
Sbjct: 1053 ALLPSEPGQACSAGHRFMTDLLVSSL 1078


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3089 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3148

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3149 GNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 3207

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P  VT L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3208 KPKQVTALAGRRVIQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPHEI 3266

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3267 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 3326

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3327 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3384

Query: 534  SLFSIAYTVP 543
            S  SIA+ +P
Sbjct: 3385 SSHSIAWGLP 3394



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4244 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITS 4302

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4303 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4361

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4362 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4421

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4422 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-DGTV 4480

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4481 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4534

Query: 571  F 571
             
Sbjct: 4535 L 4535



 Score =  156 bits (394), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 179/679 (26%), Positives = 295/679 (43%), Gaps = 69/679 (10%)

Query: 250  LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
            L    ++P P     +  I+S++   C   H L + S    YSWG GE  +LGHG+T ++
Sbjct: 597  LGKPELEPQPIEELAQETILSIA-GHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHAR 655

Query: 310  RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
              P  I      + V  V  G S+SAA+T  G LYTWG G +GRLGHG+   +  P +V 
Sbjct: 656  AVPTKISA--LDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVM 713

Query: 370  ELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             L++      A+  G++H+L L+ +G  V++ G G+ GKLG+ +      P ++E L   
Sbjct: 714  ALAEYEIIDVALGSGDAHSLCLTSEG-LVYAWGDGDYGKLGNGNCNSSLQPILVETLP-- 770

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFH---TPVLVTGLSSHQIVDVS 478
            RV+++ AG   S+ALT +G ++ WG    LG +    S      P LV+ L   ++VDV+
Sbjct: 771  RVQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVA 830

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            +G +H LAL+   EV+ WG N   Q C       P+ +   +VGL  +    I   +  S
Sbjct: 831  VGVAHCLALTSCGEVFGWGRNDSQQICPSSVSCEPLLRLPILVGLPTLPASGIACTASQS 890

Query: 538  IAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSA--CFETGDYIPFCSKVT-HA 594
            + +T          A  P  +D+   TF L+ + L   S+    +T +    C  V    
Sbjct: 891  LIWTQSSQQGLPLRA--PFVIDLGEPTFRLLDQLLSMCSSQDNRQTPNQESECIAVACLN 948

Query: 595  QFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLV-DMETSPEIETLLTDCLA 653
               L LL L+ + L    +G  S    G   ++L+  +  L    +    I+      L 
Sbjct: 949  LLRLQLLALIGNGLDPRQVGLASG---GRLLSSLKTRILTLAGGSQVLRTIQVAAQQALQ 1005

Query: 654  IGASLLLPPVVEQLDLLKTLLSQD--HPLSNGQRMLLGVITSSLHK----NEELAHIFYF 707
             G S+LLP   E+   L +LL  +     S G R +  ++ SSL         L H    
Sbjct: 1006 DGWSVLLPTAAERAQTLTSLLPSEPGQASSAGHRFMTDLLVSSLMAEGGLESALQHAIRL 1065

Query: 708  DQNQ------DTNILMLEDLLKISCRKSYAYTLTHF------------QSNACKVSPQET 749
            + +       D   L L  L+      + A T T              +   C + P  +
Sbjct: 1066 ESSSCSADCGDGIHLPLLQLITRLLGNNAALTQTRLSPSLGKEKQEEQEPGHCHLEPSRS 1125

Query: 750  PVSQVVTLLQSLIITQYVVKHSEI----CEEVYQHYLDIVFPHVIDILERSIAWVNQGKD 805
            P   ++   Q L++       +E      E +   YL  + P  +  L+++     Q +D
Sbjct: 1126 PSLSLLHRFQRLLLAYIHQADAEEETTGAEALLVQYLHSLIPACVSTLQQAHELALQYRD 1185

Query: 806  ------IEVLNELLYNSLAGKILFSIVHSLLINIHRSMYPTL------RYFLAILPLLDS 853
                  +  L+ +L + ++  +L  ++  L++ + R     L      R FL +L +LD 
Sbjct: 1186 HAGDHPVGHLSRILQSDISDALLHELLVGLVL-LKRDRPQCLASLRWARLFLPLLRVLDR 1244

Query: 854  LNQLLPMQGNYTETNSFLW 872
            LN+ L  +G   + +   W
Sbjct: 1245 LNRAL-GEGELRDGDDMGW 1262



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 119/236 (50%), Gaps = 15/236 (6%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
           H E   F    +DS      +G G    LG  +T  + +P ++      V      CS  
Sbjct: 621 HCEGRHF--LAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRCVKAVFCGCS-- 676

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRVTQVSAGHSHSAAVT 338
           +   +T  G +Y+WG G +G+LGHGN+  Q  P ++M    Y      + +G +HS  +T
Sbjct: 677 YSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLT 736

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            +GL+Y WG+GD+G+LG+G+  S   P LV  L  V  +  G   ++ L+ +GH ++S G
Sbjct: 737 SEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQRIFAGAQSSMALTTEGH-LYSWG 795

Query: 399 SGNLGKLGHEDTGK----VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
             +   LGH+   +     + P+++ +L+  R+  V  G +  +ALT  G VF WG
Sbjct: 796 KASC--LGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 54/218 (24%)

Query: 374 VGAVSCGESHTLVLSQDG------------------------------------------ 391
           V  ++C ES  L+LSQDG                                          
Sbjct: 573 VKQIACSESLLLLLSQDGKLYNCRLGKPELEPQPIEELAQETILSIAGHCEGRHFLAIDS 632

Query: 392 -HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
               +S G+G   +LGH DT     P  I AL +  V+ V  G S+S A+TW G ++ WG
Sbjct: 633 NRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC-VKAVFCGCSYSAAITWSGNLYTWG 691

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQ 503
            G        +S     P +V  L+ ++I+DV++  GD+H L L+    VYAWG    G+
Sbjct: 692 RGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGK 751

Query: 504 CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G  N ++ + QP  V  L    V++I AG+  S+A T
Sbjct: 752 LGNGNCNSSL-QPILVETLPR--VQRIFAGAQSSMALT 786


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  212 bits (540), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 170/480 (35%), Positives = 235/480 (48%), Gaps = 33/480 (6%)

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           V+     H L +T EGEVYSWG G+ GKLGHG+T  +  P L+ G L GK+V ++S G +
Sbjct: 21  VTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTG-LAGKQVIRISCGST 79

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGESHTLVL 387
           HSAAVT +G LYTWG G++GRLGHG  + +  P LV+ L      DV A   G++HTL  
Sbjct: 80  HSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDV-ACGSGDAHTLAA 138

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           + DG TVWS G G+ GKLG   +     PK IE L+   V KV  G  FS+ALT DG V+
Sbjct: 139 ADDG-TVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVW 197

Query: 448 WWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
            WG G        +      P LV  L    +VDVS+G  H LAL+   EVY WG N  G
Sbjct: 198 TWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQG 257

Query: 503 QCGQ-DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVR 561
           Q G  D    P  +P+ V GL    +  I  G   S A++     S         CVDV 
Sbjct: 258 QLGDIDCQIRP--EPTLVSGLASKGIVGIACGPAQSFAWSCAGQWSV--GTRLQFCVDVC 313

Query: 562 PHTFTLIREFLEQYSACFETG--DYIPFC-SKVTHAQFILLLLRL-LSSHLYLALIGARS 617
             TF  +   L + S    TG  D+ P    K   A   L LLRL L + +   ++ A  
Sbjct: 314 KRTFEHLDALLRRVSEDL-TGSQDWPPPPQEKECIAVSALNLLRLQLHAAITEDVVAAEL 372

Query: 618 SSVLGNETAALRHVLFKLVDMETS----PEIETLLTDCLAIGASLLLPPVVEQLDLLKTL 673
              LG  +  L+ +  ++V + ++      ++      L  G  LLLP   E+   L  L
Sbjct: 373 G--LGVGSKLLQSLKQQVVTLASNKGVLKTVQGAAQGALRSGWVLLLPTPEERAKALTEL 430

Query: 674 LSQDHPLSN----GQRMLLGVITSSLHKNEELAHIFYFDQNQDTNILMLEDLLKISCRKS 729
           L++     +    G++ ++ ++ SSL     L        +Q+T+    E  L I  ++S
Sbjct: 431 LTETSDRQSTQQTGRKFMINLLISSLMAEGSLEQALENAIDQETSCYTGEKDLGIDTKES 490



 Score =  194 bits (494), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/372 (36%), Positives = 191/372 (51%), Gaps = 25/372 (6%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGK- 245
            KV+ WG N   Q+      K   P L        ++ I  G    F +   G +   G+ 
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGES 2481

Query: 246  --GWLGL----ANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEH 298
              G LGL    AN T+   P+++   ++ +   VS  S   H + +T EG+++SWG GE 
Sbjct: 2482 TNGRLGLGPLSANVTV---PRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGED 2538

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGHGN ++   PKLI        V  +S G SHSAA+   G LYTWG G++GRLGHGD
Sbjct: 2539 GKLGHGNRMNCDHPKLI-DTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGD 2597

Query: 359  LKSRHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              +   P  V   +   V  ++CG  ++ TL L+ DG TVWS G G+ GKLG   +   +
Sbjct: 2598 NYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDG-TVWSWGDGDFGKLGRGGSEGCS 2656

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P  +E L+   V KV  G  FS+AL+  GLV+ WG G        +      P +V GL
Sbjct: 2657 VPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGL 2716

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
               +IVDV++G  H LA++   +V+AWG N  GQ G +N +    +P  V GLE   + +
Sbjct: 2717 RGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQG-NNTTTVNRRPQLVNGLEGQKITR 2775

Query: 530  ICAGSLFSIAYT 541
            +  GS  SIA+ 
Sbjct: 2776 VACGSSHSIAWA 2787



 Score =  184 bits (467), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 223/476 (46%), Gaps = 54/476 (11%)

Query: 94   VQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKP 153
            + SSL SR+PL     PYN   ++ E++L        +LI   C                
Sbjct: 3285 IASSLESRLPL-----PYNFVQDVREKIL--------ELIPEEC---------------- 3315

Query: 154  LGDRKSSNSNTDIDSTSTPKLTY--NIGDTDISV---AHSKVYTWGCNLHHQILDEVRGK 208
             GD +   S+T        +L    N   +D ++       +Y WG N   Q+      K
Sbjct: 3316 -GDGEEYVSHTVFKREQDEQLLLWLNQRPSDWTMTWGGSGTIYGWGHNHRGQLGSLEGAK 3374

Query: 209  CSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLV----YGKGWLGLANTTIQPLPKRV 262
               P+     ++IR ++   G+   F + + G +      +G         T+  +    
Sbjct: 3375 VKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLE 3434

Query: 263  PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
             L+  +V          H + ++++G+VYSWG G+ GKLGHGN  S  RP++I   L GK
Sbjct: 3435 SLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEA-LRGK 3493

Query: 323  RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSC- 379
             V  +S G SHSA +T++  LYTWG+G +GRLGHGD + +  P +V  L  + V  V+C 
Sbjct: 3494 GVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACG 3553

Query: 380  -GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
             G++ TL L+ D   VWS G G+ GKLG   +     P  +E+L    V KV  G+ FSV
Sbjct: 3554 SGDAQTLCLTDD-DCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSV 3612

Query: 439  ALTWDGLVFWWGLG---LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
            ALT  G V+ WG G        +  H   P  V  L   +++ ++ G  H +A +   EV
Sbjct: 3613 ALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEV 3672

Query: 494  YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSA 548
            Y WG N  GQ G D  +N + +P  V  L+   + ++  GS  +IA+ T  P N+ 
Sbjct: 3673 YTWGDNDEGQLG-DGTTNAIARPRLVTALQGKKISRVACGSAHTIAWSTCKPVNAG 3727



 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 134/253 (52%), Gaps = 14/253 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +T+ +  P  V   A    + +S C   H   VTSEGE+Y+WG G +G+LGHG+
Sbjct: 47  GKLGHGDTSPREEPTLVTGLAGKQVIRIS-CGSTHSAAVTSEGELYTWGRGNYGRLGHGS 105

Query: 306 TLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           +  Q  P L+  GL G  +  V+  +G +H+ A  +DG +++WG+GD+G+LG G      
Sbjct: 106 SEDQLVPVLV-SGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCK 164

Query: 364 TPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            P  +  L  +G   V CG   +L L++DG +VW+ G G   +LGH     V  PK++EA
Sbjct: 165 NPKSIERLQGLGVCKVYCGAQFSLALTRDG-SVWTWGKGEGFRLGHGTEDHVRHPKLVEA 223

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  V  G+   +ALT  G V+ WG      LG     I    P LV+GL+S  IV
Sbjct: 224 LDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIR-PEPTLVSGLASKGIV 282

Query: 476 DVSIGDSHVLALS 488
            ++ G +   A S
Sbjct: 283 GIACGPAQSFAWS 295



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 15/162 (9%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP----RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
            V++WG     ++       CS P    +LQ     +  +  G   +  L ++G +  +GK
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQG--QGVCKVACGAQFSLALSTSGLVWTWGK 2693

Query: 246  G---WLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G    LG  N T    P+ V       IV ++V      H L VT  G+V++WG  +HG+
Sbjct: 2694 GDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGAL---HCLAVTDSGQVFAWGDNDHGQ 2750

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
             G+  T   RRP+L+  GL G+++T+V+ G SHS A  E  L
Sbjct: 2751 QGNNTTTVNRRPQLV-NGLEGQKITRVACGSSHSIAWAESDL 2791


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  212 bits (540), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3136 NGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3195

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+ +   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3196 GNRTTLDKPRQVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 3254

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LV  L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3255 KPKLVAALAGRRVVQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 3313

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3314 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 3373

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+DV V ++  G
Sbjct: 3374 IHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDDVFVNRVACG 3431

Query: 534  SLFSIAYTVP 543
            S  SIA+ +P
Sbjct: 3432 SSHSIAWGLP 3441



 Score =  186 bits (473), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 162/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L+G  V  ++ G +HSAA+T 
Sbjct: 4322 HCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEH-LHGMSVADIACGSAHSAAITA 4380

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4381 SGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4439

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4440 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4499

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4500 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 4558

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4559 TAIQRPRLVSALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4612

Query: 571  F 571
             
Sbjct: 4613 L 4613



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 220/465 (47%), Gaps = 36/465 (7%)

Query: 256  QPLPKRVPLEAA----IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
            +P  +  PLE A     +S++   C   H + + S    YSWG GE  +LGHG+T ++  
Sbjct: 615  KPEAEPQPLEEAGHETFISIA-GHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV 673

Query: 312  PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL 371
            P  I   L    V  V  G ++SA +T  G L TWG G + RLGHG+   R  PTLV  L
Sbjct: 674  PTKI-AALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAAL 732

Query: 372  S-----DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            +     DV A+  G++H+L L+ +G  V++ G G+ GKLG+ +      P ++E+L   R
Sbjct: 733  AEHTVVDV-ALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNCNGSLQPILVESLP--R 788

Query: 427  VRKVCAGTSFSVALTWDGLVFWWG----LG---LRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V+++ AG+ +SVAL+ +G V+ WG    LG   +  S      P LV+ L   +IVD+++
Sbjct: 789  VQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAV 848

Query: 480  GDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G +H LALS   EV+ WG N   Q C     S P+ +   +V L  +    I   +  S+
Sbjct: 849  GVAHCLALSSSGEVFGWGRNDCQQVCPSSVSSEPLLRSPILVALPTLPASGIACTAGQSL 908

Query: 539  AYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP----FCSKVTHA 594
             +T          A  P  +D+   TF L+ + L       +     P     C  V   
Sbjct: 909  IWTQSSHQGVPLRA--PFVIDLGEPTFRLLDQLLGMCMCSSQDNRQTPNQESECIAVACL 966

Query: 595  QFILL-LLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLV-DMETSPEIETLLTDCL 652
              + L LL L+++ +    +G  S S L     +L+  +  L    +    I+      L
Sbjct: 967  NLMRLQLLALIANGVEPRHVGLASGSRL---LGSLKTRILALAGGTQVLRTIQVAAQQAL 1023

Query: 653  AIGASLLLPPVVEQLDLLKTLLSQD--HPLSNGQRMLLGVITSSL 695
              G S+LLP   E+   L +LL  +     S G R +  ++ SSL
Sbjct: 1024 QDGWSVLLPTAAERALTLTSLLPSEPGQASSPGHRFMTDLLVSSL 1068



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 18/238 (7%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSE 278
           H E   F    +DS      +G G    LG  +T  + +P ++  LE   V      C+ 
Sbjct: 637 HCEGRHF--MAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTY 694

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAA 336
           + V+T    G + +WG G + +LGHGN+  +  P L+   L    V  V+  +G +HS A
Sbjct: 695 SAVITCG--GNLLTWGRGTYARLGHGNSDDRCLPTLV-AALAEHTVVDVALGSGDAHSLA 751

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +T +GL++ WG+GD+G+LG+G+      P LV  L  V  +  G  +++ LS +G  V++
Sbjct: 752 LTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFAGSQYSVALSSEGQ-VYT 810

Query: 397 MGSGNLGKLGHE----DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            G      LGH+         + P+++ +L+  R+  +  G +  +AL+  G VF WG
Sbjct: 811 WGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWG 866



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 17/226 (7%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
           +V QV    +    ++++G L+ W      RL   + + +       E     A  C   
Sbjct: 588 QVKQVVCSENQVLLLSQEGKLHAW------RLSKPEAEPQPLEEAGHETFISIAGHCEGR 641

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H + +  + H  +S G+G   +LGH DT     P  I AL +  V+ V  G ++S  +T 
Sbjct: 642 HFMAIDSN-HNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITC 700

Query: 443 DGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYA 495
            G +  WG G        +S     P LV  L+ H +VDV++  GD+H LAL+    V+A
Sbjct: 701 GGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFA 760

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           WG    G+ G  N +  + QP  V  L    V++I AGS +S+A +
Sbjct: 761 WGDGDYGKLGNGNCNGSL-QPILVESLPR--VQRIFAGSQYSVALS 803


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  212 bits (539), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 197/374 (52%), Gaps = 20/374 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3044

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3045 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3104

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3105 GNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQL 3163

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LV  L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3164 KPKLVVALAGRRVVQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 3222

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3223 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 3282

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3283 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3340

Query: 534  SLFSIAYTVPPSNS 547
            S  SIA+ +P ++S
Sbjct: 3341 SSHSIAWGLPNASS 3354



 Score =  187 bits (474), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4143 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITA 4201

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4202 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4260

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4261 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH 4320

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4321 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 4379

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4380 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4433

Query: 571  F 571
             
Sbjct: 4434 L 4434



 Score =  147 bits (370), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 219/496 (44%), Gaps = 71/496 (14%)

Query: 262  VPLEAAIVSLSVSKCSEAHVLTVTSEGEV------------------------------- 290
            VP  +    +    C E  +L ++ EG++                               
Sbjct: 562  VPTLSCRFQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHEVFISIAGHCE 621

Query: 291  -------------YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
                         YSWG GE  +LGHG+T ++  P  I   L    V  V  G S+SAA+
Sbjct: 622  GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAI 680

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T  G L TWG G + RLGHG+   R  PTLV  LSD      A+  G++H+L L+ +G  
Sbjct: 681  TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG-L 739

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
            V++ G G+ GKLG+ +      P ++E+L   RV++V AG+ FS+AL+ +G ++ WG   
Sbjct: 740  VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSLALSSEGQLYSWGKAT 797

Query: 451  -LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CG 505
             LG   +  S      P LV+ L   +IVDV++  +H LALS   EV+ WG N   Q C 
Sbjct: 798  CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP 857

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
                S P+ +   +V L       I   S  S+ +T          A  P  VD+   TF
Sbjct: 858  ASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQSSHQGVPRRA--PFVVDLGEPTF 915

Query: 566  TLIREFLEQYSA--CFETGDYIPFCSKVTHAQ-FILLLLRLLSSHLYLALIGARSSSVLG 622
             L+ + L   S+    +T +    C  V     F L LL L+++ +    +G  S S L 
Sbjct: 916  RLLDQLLGMCSSQDNRQTPNQESECIAVACLNLFRLQLLALIANGVEPRQVGLASGSRL- 974

Query: 623  NETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD--HP 679
                +L+  +  L    +    I+      L  G S+LLP   E+   L +LL  +    
Sbjct: 975  --LCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPGQA 1032

Query: 680  LSNGQRMLLGVITSSL 695
             S G R +  ++ SSL
Sbjct: 1033 SSAGHRFMTDLLVSSL 1048



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 178/414 (42%), Gaps = 71/414 (17%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLP----------SNIRHIEAGQFCTFLLDSTG 238
           K+YTW              + ++P  + LP          S   H E   F    +DS  
Sbjct: 589 KLYTW--------------RLAKPEAEPLPMEEVAHEVFISIAGHCEGRHF--LAIDSNH 632

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
               +G G    LG  +T  + +P ++  LE   V      CS  +   +T  G + +WG
Sbjct: 633 NAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS--YSAAITCGGNLLTWG 690

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHG 352
            G + +LGHGN+  +  P L++  L    V  V+  +G +HS A+T +GL++ WG+GD+G
Sbjct: 691 RGTYARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 749

Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE---- 408
           +LG+G+      P LV  L  V  V  G   +L LS +G  ++S G      LGH+    
Sbjct: 750 KLGNGNCNGSLQPILVESLPRVQRVFAGSQFSLALSSEGQ-LYSWGKATC--LGHQLVER 806

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS----F 460
                + P+++ +L+  R+  V    +  +AL+  G VF WG      +  +S+S     
Sbjct: 807 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLL 866

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE---------VYAWGSNT-------MGQC 504
            TP+LV+ L +     ++   +  L  +Q +          V   G  T       +G C
Sbjct: 867 RTPILVS-LPTFPASGIACTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTFRLLDQLLGMC 925

Query: 505 -GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             QDN   P +Q S+ + +   C+       L  IA  V P    L+S    LC
Sbjct: 926 SSQDNRQTP-NQESECIAV--ACLNLFRLQLLALIANGVEPRQVGLASGSRLLC 976


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  212 bits (539), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 175/538 (32%), Positives = 262/538 (48%), Gaps = 48/538 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A  +V +WG  L  +    V G      L +L   +  +   + C  +L   G L     
Sbjct: 421 ALQEVISWGL-LGWKYYANVSGPIQCEALANL--GVTQVACAEKCFLILSRNGKLYTQAY 477

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
               L    +Q L  R      IV ++     + H L +++  E++SWG G+ G+LGHG+
Sbjct: 478 NNNTLGPQLVQGLASR-----NIVKIAAHPDGQ-HYLALSATSELFSWGCGDGGRLGHGD 531

Query: 306 TLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           T+S   PKL+    G   GK+V  ++ G ++SAA+T DG LYTWG G++GRLGHG  + +
Sbjct: 532 TVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQ 591

Query: 363 HTPTLVTELS--DVGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             P LVT L    V  VSC  G++ TL ++++G  VWS G G+ GKLG   +    TPK+
Sbjct: 592 TVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKL 650

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQ 473
           IE L+   + KV  G+ FS+A+T DG V+ WG G        +      P ++ GL   +
Sbjct: 651 IEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKK 710

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN---FSNPVDQPSKVVGLEDVCVRQI 530
           +VDV++G +H LAL++  EVY+WGSN   QC   +    + PV  PS + GL+   +  I
Sbjct: 711 VVDVAVGSTHCLALTESGEVYSWGSND--QCQHFDTLRIAKPV--PSVLPGLDSKHIVGI 766

Query: 531 CAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTFTLIREFLEQYSACFE-TGDYIPFC 588
             G   S A++   S S  S     P  VDV P TF  +   L Q S   + T D+ P  
Sbjct: 767 SCGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTFEQLDLLLRQVSEGMDGTSDWPPPQ 823

Query: 589 SKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETA-----ALRHVLFKLV-DMETSP 642
            K   A  +L LLRL    L+ A+        LG         +L+  +  L  +     
Sbjct: 824 EKECMAVAMLNLLRL---QLHAAISHQADPECLGLGLGSVLLNSLKQTVVTLASNAGVLN 880

Query: 643 EIETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQDHPLSNGQRMLLGVITSSL 695
            +++     L  G S+LLP   E+   L  LL       +  +S G+R ++ ++ SSL
Sbjct: 881 TVQSAAQAVLQSGWSVLLPTAEERARALSALLPNAASGNEMTISPGRRFMIDLLVSSL 938



 Score =  191 bits (485), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 157/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4063 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDIAAGGAHSACITA 4121

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4122 AGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 4180

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4181 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYH 4240

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4241 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4299

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+    +  P+
Sbjct: 4300 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPSQVPM 4346



 Score =  164 bits (416), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 204/427 (47%), Gaps = 44/427 (10%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D  ST         G    +   +KV+ WG N   Q+    
Sbjct: 2921 DEDMATVPFLASDNDEEDDDKASTGSFVRKKTAGLESTATIRTKVFVWGLNDKDQLGGLK 2980

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F + + G     G    G+  LG+++ T+ P+
Sbjct: 2981 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTV-PI 3039

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3040 PRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3100 -LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3158

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3159 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECG 3217

Query: 434  TSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY--- 490
              FS+ALT  G+V+ W       ++ F+    +  L    ++ VS+     + L QY   
Sbjct: 3218 AQFSLALTKSGVVWTWXXTKHCLAVXFYYXNYLLELF---LIKVSV---RFVLLGQYLXT 3271

Query: 491  ---------------NEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGS 534
                            +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS
Sbjct: 3272 CATYFKLNIIKIVISKKVYAWGDNDHGQ--QGNGTTTVNRKPTLVHGLEGQKITRVACGS 3329

Query: 535  LFSIAYT 541
              S+A+T
Sbjct: 3330 SHSVAWT 3336



 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3966 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4025

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4026 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L    V  I AG   S   T 
Sbjct: 4086 HGNRS-PCDRPRVIESLRGTEVVDIAAGGAHSACITA 4121


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  211 bits (538), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/370 (37%), Positives = 194/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3106

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3107 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3166

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  ++ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3167 GNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 3225

Query: 364  TPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LVT L    V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3226 KPKLVTALHGRRVIQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSATPHEI 3284

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3285 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRV 3344

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3345 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3402

Query: 534  SLFSIAYTVP 543
            S  S+A+ +P
Sbjct: 3403 SSHSMAWGLP 3412



 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 162/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T++GEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4297 HCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLE-HLNGMSVADIACGSAHSAAITA 4355

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D + VW
Sbjct: 4356 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDN-VW 4414

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4415 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4474

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4475 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG-DGTV 4533

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4534 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4587

Query: 571  F 571
             
Sbjct: 4588 L 4588



 Score =  161 bits (407), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 210/444 (47%), Gaps = 31/444 (6%)

Query: 273  VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
             + C   H L V S    YSWGVG+  +LGHG+  ++  P  I   +  +RV  V  G S
Sbjct: 621  AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLV--RRVQSVYCGCS 678

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
            +SAA+T  G LYTWG G +GRLGHG+   +  P +V  L D      A+  G++HTL L+
Sbjct: 679  YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            + G  V++ G G+ GKLG+        P +IE L   RV++V AG+ FS+ALT +G ++ 
Sbjct: 739  RGG-LVYAWGDGDYGKLGNGSCNSSLQPLLIECLP--RVQRVFAGSQFSLALTCEGQLYS 795

Query: 449  WG----LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            WG    LG   +  +      P L+T L   +IV V++G +H LALS   E++ WG N  
Sbjct: 796  WGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDN 855

Query: 502  GQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDV 560
             Q C     S P+ +    V L  +    +   ++ S+ +T          A  P  +D+
Sbjct: 856  QQICPASVCSEPLLRQPIQVTLPTMPASGMACTAVQSLIWTQTSRQGVPLRA--PFVIDL 913

Query: 561  RPHTFTLIREFLEQYSACF-----ETGDYIPFCSKVTHAQFILL-LLRLLSSHLYLALIG 614
               TF L+ + L   SA       +T +    C  V     + L LL L+++ +    +G
Sbjct: 914  GEPTFRLLDQLLGLCSASAAQDNRQTPNQESECIAVACLNLVRLQLLALIANGVEPRNVG 973

Query: 615  ARSSSVLGNETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTL 673
              S   L N    L+  +  L    +    I+      L  G S+LLP   E+   L  L
Sbjct: 974  LASGGRLLNN---LKTRILSLAGGSQVLRTIQIAAQQALQDGWSVLLPTAAERAQTLTAL 1030

Query: 674  LSQD--HPLSNGQRMLLGVITSSL 695
            L  +     S G R +  ++ SSL
Sbjct: 1031 LPSEPGQACSAGHRFMTDLLVSSL 1054



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 17/237 (7%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
           H E   F    +DS      +G G    LG  +   + LP ++  E+ +  +    C  +
Sbjct: 623 HCEGRHF--LAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKI--ESLVRRVQSVYCGCS 678

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAV 337
           +   +T  G +Y+WG G +G+LGHGN+  Q  P ++M  L   +V  V+  +G +H+  +
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVM-ALKDHQVLDVALGSGDAHTLCL 737

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           T  GL+Y WG+GD+G+LG+G   S   P L+  L  V  V  G   +L L+ +G  ++S 
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQ-LYSW 796

Query: 398 GSGNLGKLGHE----DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  +   LGH+    +    + P++I +L+  R+  V  G +  +AL+ +G +F WG
Sbjct: 797 GKASC--LGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  211 bits (538), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 198/374 (52%), Gaps = 20/374 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 734  VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 793

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 794  NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 853

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 854  GNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 912

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LVT L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 913  KPKLVTALAGRRVVQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 971

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 972  ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 1031

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 1032 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 1089

Query: 534  SLFSIAYTVPPSNS 547
            S  SIA+ +P +++
Sbjct: 1090 SSHSIAWGLPNAST 1103



 Score =  184 bits (467), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 1895 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITA 1953

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 1954 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 2012

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 2013 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH 2072

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 2073 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 2131

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 2132 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 2185

Query: 571  F 571
             
Sbjct: 2186 L 2186


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 207/400 (51%), Gaps = 30/400 (7%)

Query: 159  SSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP 218
            S+++N   DST  P           S    +V+ WG N   Q+      K   P      
Sbjct: 2036 STSANVAQDSTGEPS----------STVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFL 2085

Query: 219  SNIR--HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSV 273
            S +   HI  G    F++   G L   G+G    LGL ++   P P+ +P  +  V   V
Sbjct: 2086 SQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKV 2145

Query: 274  SKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            +  S   H + +T +G+V+SWG GE GKLGHGN L+  +PK+I   L  K++  ++ G S
Sbjct: 2146 AVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIACGSS 2204

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLS 388
            HSAA+T  G LYTWG G++GRLGHGD  ++  P L+  L    +  V+CG  ++ TL L+
Sbjct: 2205 HSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALT 2264

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             +G  V+S G G+ GKLG   +     P  IE L    V ++  G  FS+ALT  G V+ 
Sbjct: 2265 DEGW-VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWT 2323

Query: 449  WGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
            WG G        S      P ++  L   +++ V++G  H LA++   +VYAWG N  GQ
Sbjct: 2324 WGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 2383

Query: 504  CGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              Q N +  V+ +P+ V GLEDV + ++  GS  SIA+T+
Sbjct: 2384 --QGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTL 2421



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/280 (38%), Positives = 157/280 (56%), Gaps = 12/280 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++++ +VYSWG G+ GKLGHGN L+   PKLI   L G  +  ++ G +HSAA+T 
Sbjct: 3129 HCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITS 3187

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGHGD + +  P L+ EL    V  V+C  G++ TL ++ D + VW
Sbjct: 3188 TGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN-VW 3246

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     PK IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3247 SWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH 3306

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 +      P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D+ +
Sbjct: 3307 RLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG-DDTT 3365

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            N + +P  V  L+   +  +  GS  ++A++   ++SA +
Sbjct: 3366 NAIQRPRLVSALQGKKITNVACGSAHTLAWSTNNASSACA 3405



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 8/156 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG V+  G G
Sbjct: 3032 TIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYG 3091

Query: 453  LRSSSISFHT-----PVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                     T     P L+  +    I  +++  G  H LALS  N+VY+WG    G+ G
Sbjct: 3092 AGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLG 3151

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              N     + P  +  L+   +  I  G   S A T
Sbjct: 3152 HGN-RLACETPKLIEALQGYEIIDIACGGAHSAAIT 3186


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 3156

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 3157 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3216

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 3217 GNRTTLDKPRLVET-LRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQL 3275

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LV  L+   V  V+CG  ++ TL L++DG  V+S G G+ GKLG   +    TP  I
Sbjct: 3276 KPKLVAALAGRRVIQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 3334

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 3335 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRV 3394

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 3395 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3452

Query: 534  SLFSIAYTVP 543
            S  SIA+ +P
Sbjct: 3453 SSHSIAWGLP 3462



 Score =  186 bits (473), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 4334 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITA 4392

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 4393 SGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDD-DNVW 4451

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4452 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFH 4511

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 4512 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 4570

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 4571 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4624

Query: 571  F 571
             
Sbjct: 4625 L 4625



 Score =  164 bits (415), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 221/447 (49%), Gaps = 31/447 (6%)

Query: 268  IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            IVS++ S C   H + +      YSWG GE  +LGHG+T ++  P  I   L  + V  V
Sbjct: 620  IVSIA-SHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKIT--LLDRCVKAV 676

Query: 328  SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGES 382
              G S+SAA+T  G LYTWG G + RLGHG+   +  PT+V  L+     DV A+  G++
Sbjct: 677  FCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDV-ALGSGDA 735

Query: 383  HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            H+L L+ +GH V++ G  + GKLG+ +     +P ++E+L K  V++V AG  FS+ALT 
Sbjct: 736  HSLCLTSEGH-VYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQRVFAGAQFSMALTT 792

Query: 443  DGLVFWWG----LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
            DG ++ WG    LG   +  S+     P L++GL   +IVDV++G +H LALS   EV+ 
Sbjct: 793  DGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFG 852

Query: 496  WGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
            WG N   Q C     S P+ +   +V L  +    +   +  S+ +T   S+        
Sbjct: 853  WGRNDSQQICPSSVSSEPLLRVPILVALPTLPASGVACTASQSLIWTQ--SSRQGVPLRC 910

Query: 555  PLCVDVRPHTFTLIREFLEQYSA--CFETGDYIPFCSKVTHAQFILL-LLRLLSSHLYLA 611
            P  +D    TF L+ + L   S+    +T +    C  V     + L LL L+ + +   
Sbjct: 911  PFVIDPGEPTFRLLDQLLSMCSSQDNRQTPNQESECIAVACLNLVRLQLLALIINGVEPR 970

Query: 612  LIGARSSSVLGNETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLL 670
             +G  S    G    +L+  +  L    +    I+      L  G S+LLP   E+   L
Sbjct: 971  QVGLASG---GRLLGSLKSRILSLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTL 1027

Query: 671  KTLLSQD--HPLSNGQRMLLGVITSSL 695
             +LL  +     S+G R +  ++ SSL
Sbjct: 1028 TSLLPSEPGQASSSGHRFMTDLLVSSL 1054



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 12/209 (5%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +T  + +P ++ L    V      CS  +   +T  G +Y+WG G + +LGHGN+ 
Sbjct: 652 LGHGDTHARAVPTKITLLDRCVKAVFCGCS--YSAAITCSGNLYTWGRGTYARLGHGNSD 709

Query: 308 SQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            Q  P ++M  L    +  V+  +G +HS  +T +G +Y WG+ D+G+LG+G+L    +P
Sbjct: 710 DQPLPTVVMA-LTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSP 768

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK----VTTPKVIEA 421
            LV  L  V  V  G   ++ L+ DG  ++S G  +   LGH+   +     + P++I  
Sbjct: 769 VLVESLPKVQRVFAGAQFSMALTTDGQ-LYSWGKASC--LGHQLVERSAQWCSVPRLISG 825

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           L+  R+  V  G +  +AL+  G VF WG
Sbjct: 826 LQHKRIVDVAVGVAHCLALSSCGEVFGWG 854


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/406 (36%), Positives = 207/406 (50%), Gaps = 29/406 (7%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            HS VY WG N   Q+      K   P      S ++  HI  G    F++   G L   G
Sbjct: 2908 HSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACG 2967

Query: 245  KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL +      PK +P  +  V   V+  S   H L +T +G V+SWG GE GK
Sbjct: 2968 EGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGK 3027

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN  S  +P+LI   L  KR+  V+ G  HSAA+T  G LYTWG G++GRLGHGD  
Sbjct: 3028 LGHGNCSSLDKPRLIES-LKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDTN 3086

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    V  V+CG  ++ T+ L+ DG +V+S G G+ GKLG   +    TP
Sbjct: 3087 TQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADG-SVYSWGDGDFGKLGRGGSDGCYTP 3145

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
             +++ L    V ++  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3146 LLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRG 3205

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             +++ V++G  H LA++   +VYAWG N  GQ  Q N S  V+ +PS V  L+D  V ++
Sbjct: 3206 KKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGSTIVNKKPSLVHELDDARVNRV 3263

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYS 576
              GS  SIA+ +            P   +  P TF   ++ L Q S
Sbjct: 3264 SCGSSHSIAWVLTDQ---------PAANNQEPVTFPTAKDPLGQAS 3300



 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 193/386 (50%), Gaps = 18/386 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGKGW 247
            +Y WG N   Q+      K   P L    S +R ++   G+   F + + G +   G G 
Sbjct: 3898 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGA 3957

Query: 248  ---LGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LG+  T    +P  +  ++   V          H L ++SEG VYSWG G+ GKLGH
Sbjct: 3958 VGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4017

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN LS  RPKLI   L G  +  V+ G  HSAA+T  G LYTWG+G +GRLGHGD + + 
Sbjct: 4018 GNRLSYDRPKLIEE-LLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL 4076

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            TP LV  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4077 TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKVPMKI 4135

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E+L    V KV  G+ FSVALT  G ++ WG G        +      P  V  L   +I
Sbjct: 4136 ESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4195

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A S   EV+ WG N  GQ G D  +  + +P  V  L+   + ++  GS
Sbjct: 4196 ISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTCALQRPRLVHALQGKKITRVACGS 4254

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVDV 560
              ++A++   +  +   A TP+  D+
Sbjct: 4255 AHTLAWSTMKATQSRMPATTPMEYDL 4280



 Score =  164 bits (416), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 201/437 (45%), Gaps = 33/437 (7%)

Query: 259 PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           P+RV       V++  S     H L +T +  VYSWG G+ G+LGHG+      PKLI  
Sbjct: 495 PQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIES 554

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
            L  K +T ++ G ++SAA++ +G LYTWG G++GRLGHG+      PTLV+ L+   + 
Sbjct: 555 -LVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIV 613

Query: 376 AVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
            V+C  G+S TL ++  G  V+S G G+ GKLG        TPK+++ L    V KV  G
Sbjct: 614 YVACGSGDSQTLCVTASG-IVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCG 672

Query: 434 TSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             FS ALT  G V+ WG G        +      P  +  L + ++ ++ +G  HVLAL+
Sbjct: 673 GQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALT 732

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
           +   VY WG N  GQ         V +P+    L    V  +  G   S A+     + A
Sbjct: 733 EDQLVYGWGRNDYGQI-DPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWCTSAWSVA 791

Query: 549 LSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP-----FCSKVTHAQFILLLLRL 603
              AF    VD+   TF L+   L +  AC       P      C  V     I L L  
Sbjct: 792 SRVAFV---VDICEDTFRLLDTLLSK--ACEGLPSTRPPTQDRECLAVATLNLIRLQLHT 846

Query: 604 LSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETS----PEIETLLTDCLAIGASLL 659
           + +H     I  +S  + G  +  L  +  + V + +S      I+      L  G S+L
Sbjct: 847 MITH----NIDCKSIGLAG--SPLLNSLKQRCVTLASSVGILATIQEAAQAVLQTGWSIL 900

Query: 660 LPPVVEQLDLLKTLLSQ 676
           LP   E+   L   LS+
Sbjct: 901 LPTANERAKTLSNFLSK 917



 Score =  124 bits (310), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 131/275 (47%), Gaps = 14/275 (5%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            E   L+    G +Y WG    G+LG       + P ++   L   R  Q++ G     AV
Sbjct: 3886 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAV 3944

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
            T DG +Y  G G  GRLG G   S   PTL+  +  V     AV+ G  H L LS +GH 
Sbjct: 3945 TADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGH- 4003

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            V+S G G+ GKLGH +      PK+IE L    +  V  G   S A+T  G ++ WG G 
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063

Query: 454  -----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                    S    TP LV  L  ++++DV+   GD+  L ++  + V++WG    G+ G+
Sbjct: 4064 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4123

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4124 GG-SDGCKVPMKIESLAGLGVIKVECGSQFSVALT 4157



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 11/220 (5%)

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGES 382
            + Q  A         +   +Y WG  D  +LG         P     LS +  V   G S
Sbjct: 2892 IVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGS 2951

Query: 383  HTL-VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC--AGTSFSVA 439
             TL V+SQ+G  +++ G G  G+LG  D G    PK I  L ++ ++KV   +G   ++A
Sbjct: 2952 KTLFVVSQEGK-LYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALA 3010

Query: 440  LTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
            LT DG VF WG G        +  S   P L+  L S +I DV+ G  H  A++   E+Y
Sbjct: 3011 LTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELY 3070

Query: 495  AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             WG    G+ G  + +N   +P  V  L    V Q+  GS
Sbjct: 3071 TWGLGEYGRLGHGD-TNTQLKPKLVQSLVGQRVIQVACGS 3109


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  211 bits (536), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 195/370 (52%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
            V  WG N   Q+      K   P      S +R  HI  G    F++   G +   G+G 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 1893

Query: 247  --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
               LGL  T   PLP ++P L   +V          H L +T +G+V+SWG GE GKLGH
Sbjct: 1894 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 1953

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN  +  +P+L+   L  K++  V+ G SHSAA++  G LYTWG G++GRLGHGD  ++ 
Sbjct: 1954 GNRTTLDKPRLVET-LRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQL 2012

Query: 364  TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P LV  L+   V  V+CG  ++ TL L++DG +V+S G G+ GKLG   +    TP  I
Sbjct: 2013 KPKLVAALAGRRVIQVACGSRDAQTLALTEDG-SVFSWGDGDFGKLGRGGSEGSDTPHEI 2071

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            E L    V ++  G  FS+ALT  G V+ WG G               P  + GL   ++
Sbjct: 2072 ERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 2131

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
            + V++G  H LA++   +VYAWG N  GQ G  N F N   +P+ V+GL+ V V ++  G
Sbjct: 2132 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 2189

Query: 534  SLFSIAYTVP 543
            S  SIA+ +P
Sbjct: 2190 SSHSIAWGLP 2199



 Score =  183 bits (465), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 160/301 (53%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T+EGEVY+WG GE GKLGHGN +S  RPKL+   L G  V  ++ G +HSAA+T 
Sbjct: 3075 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITA 3133

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
             G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  G++ TL ++ D   VW
Sbjct: 3134 SGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 3192

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ W  G   
Sbjct: 3193 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFH 3252

Query: 453  -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             L   S+     P  V  L   +I+ ++ G  H +A S   EVY WG N  GQ G D   
Sbjct: 3253 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 3311

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
              + +P  V  L+   + ++  GS    A+T+  S S LS    PL     P  + L+R+
Sbjct: 3312 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 3365

Query: 571  F 571
             
Sbjct: 3366 L 3366


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  211 bits (536), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/469 (33%), Positives = 233/469 (49%), Gaps = 45/469 (9%)

Query: 115  LNLLEEVLRPATHYQVDL----IRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTS 170
            + L+E  +R      +D     I  AC+          DN + L  R S  S+   D+  
Sbjct: 2798 MKLIEIAIRHCKCNGIDCRVHSINIACIPNTCEQVAVTDNFEYLAVRSSHRSD---DTLR 2854

Query: 171  TPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA---- 226
                   I +TDI    S+V+ WG N   Q+     G C   +++S P+ +++I A    
Sbjct: 2855 NENKGTGIDNTDID---SRVFVWGLNDKGQL-----GGCKGSKVKS-PTEMKNIAALRPV 2905

Query: 227  ----GQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSE 278
                G    F++   G + V G+G    LGL NT    +P ++  L    V         
Sbjct: 2906 SIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGG 2965

Query: 279  AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
             H L +T EG+V+SWG G  GKLGHG+  S+  P LI   L  K + +++ G SHSAAVT
Sbjct: 2966 RHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEA-LESKLIVEIACGSSHSAAVT 3024

Query: 339  EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTV 394
             DG LYTWG GD+GRLGHGD K+ H P  V  L D  V  ++CG  ++ TL L+ D + V
Sbjct: 3025 ADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALT-DNNCV 3083

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
            WS G G+ GKLG   +     P+ I+AL    V ++  G  FS+AL+  G V+ WG G  
Sbjct: 3084 WSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDY 3143

Query: 453  ---LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  +   + +P L+ G L   +I ++++G  H LA++   EVY+WG N  GQ G  N
Sbjct: 3144 YRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGN 3203

Query: 509  FSNPVDQPSKVVG-LEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
             +    +P   +G L+ V +  I  GS  SIA+     N  L+ ++ P+
Sbjct: 3204 -TTVNKRPQICLGELDGVKISHIACGSSHSIAWC---GNLQLTVSYVPV 3248



 Score =  190 bits (483), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 136/373 (36%), Positives = 190/373 (50%), Gaps = 22/373 (5%)

Query: 186  AHSKVYTWGCNLHHQILDEVRG-KCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLV 242
            ++ K Y WG N H   L  V+G K   P +  + + +R   +  G+   F+L S G +  
Sbjct: 3768 SNHKFYVWGHN-HRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYA 3826

Query: 243  YGKGWLGL-----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             G G  G      ++  + P+         I  LSV      H + +TS  EV+SWG GE
Sbjct: 3827 SGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGR-HAMVLTSNFEVFSWGDGE 3885

Query: 298  HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
             GKLGHG+ LS   P+ I   L GK++  +S G SHSAA+T  G LYTWG+G +GRLGHG
Sbjct: 3886 DGKLGHGDKLSSETPRKIEA-LLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHG 3944

Query: 358  DLKSRHTPTLVTELS--DVGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            D      P L+  L    V  V+C  G++ TL ++ D   VWS G G+ GKLG   +   
Sbjct: 3945 DGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDD-DCVWSWGDGDYGKLGRGGSDGC 4003

Query: 414  TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTG 468
              P  IE+L    V KV  G+ FSVALT +G ++ WG G        ++     P  V  
Sbjct: 4004 KKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVAC 4063

Query: 469  LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
            L   QIV V+ G  H +A +   EV+ WG N  GQ G     NP+ +P+ V  LE+V + 
Sbjct: 4064 LQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTL-NPIPEPTLVTVLENVKLN 4122

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S A++
Sbjct: 4123 RVGCGSAHSFAWS 4135



 Score =  182 bits (461), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 25/307 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++S+G VYSWG G+ G+LGHG+   +R P+L+   L  K++TQ++ G ++SAAVT 
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKE-LVNKKITQIACGSTYSAAVTS 580

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
           +G LYTWG G +GRLGHG+ + R  PTLV  LS   V  V+C  G++HTL + +DG  VW
Sbjct: 581 NGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDG-IVW 639

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALR---KFRVRKVCAGTSFSVALTWDGLVFWWGL- 451
           S G G+ GKLG   +     PKV+E L+   K+ V  +C G+ FSVAL  DG V+ WG  
Sbjct: 640 SWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLC-GSQFSVALGKDGTVWTWGKS 698

Query: 452 -GLRSSSISF---HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC-GQ 506
            G R    +      P +V GL ++ IVD+++G SH LAL+   +++ WGS+        
Sbjct: 699 DGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSS 758

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS-SAFTPLCVDVRPHTF 565
           DN++    +P+ +  +    +  +  G   +  +T   S   L      P C++V   TF
Sbjct: 759 DNYNM---EPTCISAINKEFIAGVACGPAQNFLWT---SGGKLEIETHLPYCLEVSSGTF 812

Query: 566 TLIREFL 572
             + + +
Sbjct: 813 EKLNQLI 819



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 134/258 (51%), Gaps = 14/258 (5%)

Query: 234 LDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           L S G +  +G G  G L +  I+  P+ V  E     ++   C   +   VTS GE+Y+
Sbjct: 528 LSSDGCVYSWGSGDGGRLGHGDIRREPELVK-ELVNKKITQIACGSTYSAAVTSNGELYT 586

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGD 350
           WG G +G+LGHGN+  +  P L+  GL G  V  V+  +G +H+ A+ +DG++++WG+GD
Sbjct: 587 WGRGSYGRLGHGNSEDRLLPTLV-AGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGD 645

Query: 351 HGRLGHGDLKSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           +G+LG G       P +V  L      +  V CG   ++ L +DG TVW+ G  +  +LG
Sbjct: 646 YGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDG-TVWTWGKSDGYRLG 704

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT---- 462
           H     V  PK++E L  + +  +  G S  +ALT +  +F WG  ++  ++S       
Sbjct: 705 HGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNME 764

Query: 463 PVLVTGLSSHQIVDVSIG 480
           P  ++ ++   I  V+ G
Sbjct: 765 PTCISAINKEFIAGVACG 782



 Score = 48.9 bits (115), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS 456
           +G GN+  LG E      + K+ E + +  ++++   +   +ALT +G V+      R  
Sbjct: 443 LGWGNINWLGGESND--GSLKIYETVAELGIKQIMCSSDNIIALTNNGRVYSLAYNARCE 500

Query: 457 SISFHTPVLVTGLSSHQI--VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           +     PVL+  L   +I  +  ++   H LALS    VY+WGS   G+ G  +      
Sbjct: 501 A-----PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDIRR--- 552

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +P  V  L +  + QI  GS +S A T
Sbjct: 553 EPELVKELVNKKITQIACGSTYSAAVT 579


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  211 bits (536), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/404 (35%), Positives = 206/404 (50%), Gaps = 30/404 (7%)

Query: 155  GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL 214
            G   S+N     DST  P           S    +V+ WG N   Q+      K   P  
Sbjct: 2871 GPSTSANVGRSQDSTGEPS----------STVGCRVFVWGLNDKDQLGGMKGSKVKLPVQ 2920

Query: 215  QSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIV 269
                S +   HI  G    F++   G L   G+G    LGL ++   P P+ +P  +  V
Sbjct: 2921 SDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYV 2980

Query: 270  SLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
               V+  S   H + +T +G+V+SWG GE GKLGHGN L+  +PK+I   L  K++  ++
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIA 3039

Query: 329  AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHT 384
             G SHSAA+T  G LYTWG G++GRLGHGD  ++  P L+  L    +  V+CG  ++ T
Sbjct: 3040 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQT 3099

Query: 385  LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            L L+ +G  V+S G G+ GKLG   +     P  IE L    V ++  G  FS+ALT  G
Sbjct: 3100 LALTDEGW-VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTG 3158

Query: 445  LVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
             V+ WG G        S      P ++  L   +++ V++G  H LA++   +VYAWG N
Sbjct: 3159 EVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDN 3218

Query: 500  TMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              GQ  Q N +  V+ +P+ V GLEDV + ++  GS  SIA+T+
Sbjct: 3219 DHGQ--QGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTL 3260



 Score =  207 bits (528), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 192/632 (30%), Positives = 298/632 (47%), Gaps = 69/632 (10%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T + EVYSWG G+ G+LGHG+T ++  P LI   L GK +  V  G ++SAA++ 
Sbjct: 526  HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISA 584

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE--SHTLVLSQDGHTVW 395
            +G LYTWG G++GRLGHG  +   TPT+++ LSD  +  V+CG   +HTL ++  G  V+
Sbjct: 585  NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK-VY 643

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G G+ GKLG   +     P++IE L+  ++ +V  G  FSVAL+ DG V+ WG G   
Sbjct: 644  SWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGW 703

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNF 509
                 +  +   P +V  L   ++V VS+G SHVLAL+   EVY WG N   Q C  D+ 
Sbjct: 704  KLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC--DSS 761

Query: 510  SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
               V QP  +  L+   V  +C G   S A+T    N        P  +D+   TF LI 
Sbjct: 762  ELFVQQPRLIEALKGQKVVGVCCGPAQSFAWT--DDNERTPKTAVPFVIDLGEQTFKLIE 819

Query: 570  EFLEQYSACFETGDYIPFCSKVTHAQFILLLLR-LLSSHLYLALIGARSSSVLGNETAAL 628
              LE         D    C  V+    + L L  ++S++L    +G  ++S L N     
Sbjct: 820  NLLEVVLTNTIAQD--KECIAVSALNLLHLQLHCIISNNLDTKTLGIGANSKLLNSLKTQ 877

Query: 629  RHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL----SQDHPLSNGQ 684
               L    D+   P +++   + L  G S+LLP    +  +L +LL    S+     +G 
Sbjct: 878  VVCLASASDI--LPSVQSAAQNALQAGWSVLLPTANGRARILSSLLLNTDSETKMCKSGH 935

Query: 685  RML---------------------LGVITSSLHKNEELAHIFYFDQNQDTNILMLEDLLK 723
            R +                     LG+  S L ++EE      F+ +     + L  L+K
Sbjct: 936  RFMTDLLVWSLMADGGLETALNEALGLDISELTESEE-----NFEPSTSHITIPLLYLIK 990

Query: 724  ISCRKSYAYTLTHFQS-NAC-KVSPQE---TPVSQVVTLLQSLIITQYVVKHSEI---CE 775
               R   A T T  +    C K+  Q    +P  ++++  Q L+I +   K  E    CE
Sbjct: 991  QLIRNGSAQTQTFLRELGTCGKMGAQRNVPSPSLKLLSRFQRLLIGRIFSKELECQDACE 1050

Query: 776  EVYQHYLDIVFPHVIDILERSIAW---VNQGKDIEVLNELLYNSLAGKILFSIVHSL-LI 831
             +   YL+    HV   L  ++A+   +   K+   + ++L + + G +L  ++ SL L+
Sbjct: 1051 TLLVKYLECFSGHVTASL--NVAYEMCLLTPKNFLYVLQILKSDIIGILLPELITSLILL 1108

Query: 832  NIHRSMYPT----LRYFLAILPLLDSLNQLLP 859
                 M+ T    L  F  ++  LD L +L P
Sbjct: 1109 ESEVEMFLTSVNWLTLFGEMIKSLDKLCRLSP 1140



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/280 (38%), Positives = 157/280 (56%), Gaps = 12/280 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++++ +VYSWG G+ GKLGHGN L+   PKLI   L G  +  ++ G +HSAA+T 
Sbjct: 3968 HCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITS 4026

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGHGD + +  P L+ EL    V  V+C  G++ TL ++ D + VW
Sbjct: 4027 TGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDN-VW 4085

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     PK IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4086 SWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH 4145

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 +      P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D+ +
Sbjct: 4146 RLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLG-DDTT 4204

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            N + +P  V  L+   +  +  GS  ++A++   ++SA +
Sbjct: 4205 NAIQRPRLVSALQGKKITNVACGSAHTLAWSTNNASSACA 4244



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 130/269 (48%), Gaps = 22/269 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +VY+WG     ++          P L Q+L   +I  +E G   +  + + G L  +G+G
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRG 594

Query: 247 WLG----------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             G          L  T I  L     ++ A  S        AH L +TS+G+VYSWG G
Sbjct: 595 NYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFY------AHTLCITSQGKVYSWGDG 648

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           ++GKLG G +   + P+LI   L   ++ QV  G   S A++EDG +YTWG+G+  +LGH
Sbjct: 649 DYGKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGH 707

Query: 357 GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++   P +V  L D  V  VS G SH L L+  G  V+  G     ++       V 
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGE-VYGWGKNENKQICDSSELFVQ 766

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            P++IEAL+  +V  VC G + S A T D
Sbjct: 767 QPRLIEALKGQKVVGVCCGPAQSFAWTDD 795



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 8/156 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG V+  G G
Sbjct: 3871 TIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGYG 3930

Query: 453  LRSSSISFHT-----PVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                     T     P L+  +    I  +++  G  H LALS  N+VY+WG    G+ G
Sbjct: 3931 AGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLG 3990

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              N     + P  +  L+   +  I  G   S A T
Sbjct: 3991 HGN-RLACETPKLIEALQGYEIIDIACGGAHSAAIT 4025



 Score = 42.7 bits (99), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 11/136 (8%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIV 475
           P+  + L +  ++++C      + LT  G VF         S     P  +TGLS   ++
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF-----FMYYSSDTQCPQEMTGLSGINMI 516

Query: 476 DVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            ++      H LAL++  EVY+WG+   G+ G  + S   ++P+ +  L+   +  +  G
Sbjct: 517 KIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECG 575

Query: 534 SLFSIAYTVPPSNSAL 549
             +S A +   +N AL
Sbjct: 576 GTYSAAIS---ANGAL 588


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  209 bits (532), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/409 (35%), Positives = 208/409 (50%), Gaps = 29/409 (7%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            ++ VY WG N   Q+      K   P    + S ++  HI  G    F++   G L   G
Sbjct: 2921 NAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACG 2980

Query: 245  KG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL +      PK +P L   I+          H L +T +G+V+SWG GE GK
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 3040

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN +S  +P+LI   L  KR+  ++ G  HSAA+  +G LYTWG G++GRLGHGD  
Sbjct: 3041 LGHGNRVSLDKPRLIEA-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTT 3099

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            +   P LV  L    V  V+CG  ++ T+ L++DG +V+S G G+ GKLG   +    +P
Sbjct: 3100 THLKPKLVDALVGQRVIQVACGSRDAQTMALTEDG-SVYSWGDGDFGKLGRGGSDGCYSP 3158

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVLVTGLSS 471
              ++ L    V +V  G  FS+ALT  G V+ WG G   R    + H    P LV GL  
Sbjct: 3159 LPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRG 3218

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             ++V V++G  H LA++   +VYAWG N  GQ  Q N S  V+ +PS V  LED  V ++
Sbjct: 3219 KKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGSTMVNRKPSLVHNLEDAKVNRV 3276

Query: 531  CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACF 579
              GS  SIA+ +            P   +  P TF   ++ L Q +  F
Sbjct: 3277 ACGSSHSIAWVLTDQ---------PTLGNQEPVTFPTAKDPLGQATLGF 3316



 Score =  195 bits (495), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/387 (35%), Positives = 197/387 (50%), Gaps = 21/387 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGKGW 247
            +Y WG N   Q+      K   P      S +R I+   G+   F + + G +   G G 
Sbjct: 3896 IYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGYGA 3955

Query: 248  LG-LANTTIQPLPKRVPLEAA----IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            LG L    +  +     LE+     I  ++V+   + H L ++SEG VYSWG G+ GKLG
Sbjct: 3956 LGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGK-HCLALSSEGHVYSWGEGDDGKLG 4014

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            HGN ++  RPKLI   L G  +  ++ G  HSAA++  G LYTWG+G +GRLGHGD   +
Sbjct: 4015 HGNRITYDRPKLIEA-LLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQ 4073

Query: 363  HTPTLVTELS--DVGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              PT+VT L    V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  
Sbjct: 4074 LKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKVPMK 4132

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQ 473
            IE+L    V KV  G+ FSVALT  G V+ WG G        +      P  V+ L   +
Sbjct: 4133 IESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKK 4192

Query: 474  IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            IV ++ G  H +A S   EVY WG N  GQ G D  ++    P  V  L+   + ++  G
Sbjct: 4193 IVSIATGSLHCVACSDKGEVYTWGDNDEGQLG-DGTTHAQQSPRLVHALQGKNITRVACG 4251

Query: 534  SLFSIAYTVPPSNSALSSAFTPLCVDV 560
            S  ++A++   +  +L +A TP+  D+
Sbjct: 4252 SAHTLAWSTTKATHSLPAA-TPMEYDL 4277



 Score =  170 bits (430), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 215/441 (48%), Gaps = 37/441 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +T++G VYSWG G+ G+LGHG++ S   P++I   L  + VT ++ G ++SAA++ 
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEV-LSDRTVTYIACGSTYSAAISS 570

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G L TWG G +GRLGHG       PT+VT L+   V  V+C  G+S TL ++  G  V+
Sbjct: 571 TGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSG-IVF 629

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     PK+++ L    V KV  G  FS ALT  G V+ WG G   
Sbjct: 630 SWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHY 689

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                +      P LV GL + ++ D+S+G+ H+LA+++   VY WG N   Q    +  
Sbjct: 690 RLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQI-DPSLG 748

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
             V +P+    L    V  +  G + S A+++   +     AF    VDV   TF L+  
Sbjct: 749 AVVSEPTLCPTLSGKSVIGLVCGPMQSFAWSMSTWSVPQRVAFV---VDVCEETFKLLDT 805

Query: 571 FLEQYSACFETGDYIPFCSKVTHAQ--FILLLLRLLSSHLYLALIGARSSSV--LGNETA 626
            L +  +C    + +P     T  +   ++  L LL   L+  +  +  S    LGN +A
Sbjct: 806 LLGK--SC----EGLPGTRPPTQDRECLVVAALNLLRLQLHAMITHSMDSKTVGLGNSSA 859

Query: 627 ALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVVEQLDLLKTLLSQDHPL-- 680
            L  +  + V++ +   I   + +     L  G S+LLP   E+   L   L   + L  
Sbjct: 860 LLNSIKQRCVNLASVSGILATIQEAAQAVLQTGWSILLPTANERAKTLSGFLPNTNALEI 919

Query: 681 ------SNGQRMLLGVITSSL 695
                 + GQ+ +  ++ SSL
Sbjct: 920 NSSGSSNRGQQFMADLLVSSL 940



 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 14/280 (5%)

Query: 273  VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            +S+  E   L+    G +Y WG    G+LG       + P L    L   R  Q++ G  
Sbjct: 3879 LSRRPEDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLP-LPCESLSALRPIQLAGGEQ 3937

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
               AVT DG +Y  G G  GRLG G + S   PTL+  +  V     AV+ G  H L LS
Sbjct: 3938 TLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALS 3997

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             +GH V+S G G+ GKLGH +      PK+IEAL    +  +  G   S A++  G ++ 
Sbjct: 3998 SEGH-VYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYT 4056

Query: 449  WGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTM 501
            WG G         S     P +VT L  ++++DV+   GD+  L ++  + V++WG    
Sbjct: 4057 WGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4116

Query: 502  GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G+ G+   S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4117 GKLGRGG-SDGCKVPMKIESLAGLGVVKVECGSQFSVALT 4155



 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 117/281 (41%), Gaps = 65/281 (23%)

Query: 324  VTQVSAGHSHSAAVTEDGLLYTW------------------------------------- 346
            V Q       ++ V ++  +Y W                                     
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGS 2964

Query: 347  ---------------GEGDHGRLGHGDLKSRHTPTLVTELSDV----GAVSCGESHTLVL 387
                           GEG +GRLG GD  +   P  +  LS       AV  G  H L L
Sbjct: 2965 KTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALAL 3024

Query: 388  SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
            +QDG  V+S G G  GKLGH +   +  P++IEAL+  R+R +  G+  S A+  +G ++
Sbjct: 3025 TQDGK-VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELY 3083

Query: 448  WWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNT 500
             WGLG    L     + H  P LV  L   +++ V+ G  D+  +AL++   VY+WG   
Sbjct: 3084 TWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGD 3143

Query: 501  MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             G+ G+   S+    P  V  L  + V Q+  G+ FS+A T
Sbjct: 3144 FGKLGRGG-SDGCYSPLPVDRLNGLGVVQVECGAQFSLALT 3183



 Score = 78.6 bits (192), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 117/267 (43%), Gaps = 41/267 (15%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS---KVYTWG----CNLHHQILDEVRG 207
           GD  S +    I+  S   +TY    +  S A S   ++ TWG      L H I D++  
Sbjct: 536 GDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDI-- 593

Query: 208 KCSRPRLQSLPS--------NIRHIE--AGQFCTFLLDSTGGLLVYGKG---WLGLANTT 254
                   S+P+         + H+   +G   T  + ++G +  +G G    LG   + 
Sbjct: 594 --------SIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSD 645

Query: 255 IQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP 312
              LPK V   L+  +V +    C       +T+ GEVY+WG G+H +LGHGN    R P
Sbjct: 646 GSKLPKIVDKLLDQNVVKVF---CGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFP 702

Query: 313 KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           KL+  GL  K+V  +S G+ H  A+TED L+Y WG  D  ++          PTL   LS
Sbjct: 703 KLVE-GLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLS 761

Query: 373 DVGAVS--CGESHTLVLSQDGHTVWSM 397
               +   CG   +   S    + WS+
Sbjct: 762 GKSVIGLVCGPMQSFAWSM---STWSV 785


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
           domestica]
          Length = 4706

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 224/442 (50%), Gaps = 35/442 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEV+SWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   ++VDV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 744 DTLRITKPEPTALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALI-----GARSSS 619
             +   L Q S   + T D+ P   K   A   L LLRL    L+ A+            
Sbjct: 801 EQLDLLLRQVSEGMDGTSDWPPPQEKECMAVATLNLLRL---QLHAAISHQVDPECLGLG 857

Query: 620 VLGNETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---- 674
           +      +L+  +  L  +      +++     L  G S+LLP   E+   L  LL    
Sbjct: 858 LGSVLLNSLKQTVVTLASNAGVLNTVQSAAQAVLQSGWSVLLPTAEERARALSALLPSAV 917

Query: 675 -SQDHPLSNGQRMLLGVITSSL 695
              D  +S G+R ++ ++  SL
Sbjct: 918 SGNDMNVSPGRRFMIDLLVGSL 939



 Score =  195 bits (495), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 216/424 (50%), Gaps = 25/424 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKL--TYNIGDTDISVAHSKVYTWGC 195
            L+ L  +   D+++  +    S N   + D  +T  L    + G    +   +KV+ WG 
Sbjct: 2908 LIILGRIRAEDEDLAAVPFLASDNEEEEDDKANTGSLIRKKSSGLESAATIRTKVFVWGL 2967

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 2968 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 3027

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            G+++ T+ P+P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + +
Sbjct: 3028 GISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3086

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 3087 NCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 3146 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVS 478
               V ++  G  FS+ALT  G+V+ WG G        + +    P +V GL   +IV V+
Sbjct: 3205 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3264

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFS 537
            +G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S
Sbjct: 3265 VGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 538  IAYT 541
            +A+T
Sbjct: 3323 VAWT 3326



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 123/283 (43%), Gaps = 34/283 (12%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3949 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPIQLIGGEQTLFAVTA 4005

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            DG +    E   G                  + D+ A   G++ TL L+ D  TVWS G 
Sbjct: 4006 DGKV----EALQG----------------YRVIDI-ACGSGDAQTLCLTDD-DTVWSWGD 4043

Query: 400  GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LR 454
            G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G       
Sbjct: 4044 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4103

Query: 455  SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +N + 
Sbjct: 4104 GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTTNAIQ 4162

Query: 515  QPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            +P  V  L+   + ++  GS  ++A+ T  P+N+       P+
Sbjct: 4163 RPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQVPM 4205



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 4/164 (2%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            +A  L +T +  V+SWG G++GKLG G +   + P + +  L G  V +V  G   S A+
Sbjct: 4026 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP-MKIDSLTGLGVVKVECGSQFSVAL 4084

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVW 395
            T+ G +YTWG+GD+ RLGHG       P  V  L    V A++ G  H +  ++DG  V+
Sbjct: 4085 TKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE-VY 4143

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            + G  + G+LG   T  +  P+++ AL+  ++ +V  G++ ++A
Sbjct: 4144 TWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 6/133 (4%)

Query: 261  RVPLEA-AIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            +VP++  ++  L V K  C     + +T  G VY+WG G++ +LGHG+    RRP+ + G
Sbjct: 4058 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG 4117

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L GK+V  ++ G  H    TEDG +YTWG+ D G+LG G   +   P LV  L    + 
Sbjct: 4118 -LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN 4176

Query: 376  AVSCGESHTLVLS 388
             V+CG +HTL  S
Sbjct: 4177 RVACGSAHTLAWS 4189


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/398 (34%), Positives = 205/398 (51%), Gaps = 23/398 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+      K   P L    S++  + I  G   TF + + G L   G+  
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESS 619

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS----EAHVLTVTSEGEVYSWGVGEHGK 300
            G LG+ + T      R  L   +  L V+K S      HV+ +TS+G  +SWG GE+G+
Sbjct: 620 FGKLGIGDITGNVTSPR--LVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQ 677

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHGN +S  +P LI     GK VT +S G +HSAA+ E+  LYTWG GD GRLGHGD +
Sbjct: 678 LGHGNLMSCSKPHLIEA-FVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEE 736

Query: 361 SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           +   P  VT     +V  VSCG  ++ T+ ++ D   VWS G G+ GKLG   + +   P
Sbjct: 737 TILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDD-DKVWSWGDGDFGKLGRGGSERCLIP 795

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSS 471
             +E LR  ++ K+  G  F+VALT  G V+ WG G        + I    P LV GL  
Sbjct: 796 VEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRG 855

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             ++D+++G  H LA++Q  EV++WG N  GQ G    ++    P+ + GL +  ++ + 
Sbjct: 856 KHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGE-TDVKKVPNLITGLHNHRIKYVA 914

Query: 532 AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            GS  SIA+T   +++ +        V+  P    L++
Sbjct: 915 CGSSHSIAWTEITTSACIIDKPLSFEVNYDPMATNLVK 952



 Score =  173 bits (439), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 131/389 (33%), Positives = 188/389 (48%), Gaps = 43/389 (11%)

Query: 230  CTFLLDSTGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCS----EAH 280
            C  +  +T G LV+  G+     LGL  +     P+   L  +I  +++ K S      H
Sbjct: 1484 CDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPR---LLESIKHINIKKISVHSGGRH 1540

Query: 281  VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
             L ++S+GEV+SWG GE GKLGHGN  +  +PK I     GK +T + AG SHSAA+  +
Sbjct: 1541 CLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEF-FCGKIITNICAGGSHSAAIGLN 1599

Query: 341  GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGHGD   +  P  V  L      DV A   G++ TL ++ D + VW
Sbjct: 1600 GELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDV-ACGSGDAQTLCITNDDN-VW 1657

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P +IE L    + KV  G+ FS+ALT  G+++ WG G   
Sbjct: 1658 SWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYY 1717

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 +      P++VT L +  +  +S G  H +  +   EVY WG N  GQ G D   
Sbjct: 1718 RLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG-DGTI 1776

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDV---------- 560
                 P+    L +  + +I  GS  +IA++   ++   S    PL V V          
Sbjct: 1777 IARQTPTLNTFLLNKKIDRISCGSAHTIAWSTSKASERRS---LPLEVPVEYNNLKHLPM 1833

Query: 561  ---RPHTFTLIREFLEQYSACFETGDYIP 586
               R   F L+  F +    CF   D +P
Sbjct: 1834 NALRDRAF-LLNSFSKLICLCFPLLDLVP 1861


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  208 bits (530), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/370 (35%), Positives = 191/370 (51%), Gaps = 20/370 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGK-- 245
            VY WG N   Q+      K  RP      + ++ IE   G    F++ + G + V G   
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSS 2654

Query: 246  -GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG+        P+++P L   ++          H + ++ +G+V SWG GE GKLGH
Sbjct: 2655 GGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGH 2714

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            G+ L+   PKLI   L  KRV  ++ G +HSAA+T DG LYTWG+G +GRLGH D  S+H
Sbjct: 2715 GDILTLDTPKLI-DSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQH 2773

Query: 364  TPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            TP LV E    ++  V+CG  ++ TL L  +G+ V+S G G+ GKLG   +    TP+ +
Sbjct: 2774 TPKLVKEFVGKNITQVACGSRDAQTLALDSEGN-VYSWGDGDFGKLGRGGSDGCCTPQKV 2832

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
            E L   RV ++  G  FSVALT  G V+ WG      LGL         P LV  L    
Sbjct: 2833 ERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRGE-HVRRPTLVNQLKLVT 2891

Query: 474  IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            I  +++G  H +A+S   +VY WG N  GQ G +  +N   +P  V    ++ + ++  G
Sbjct: 2892 IDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQG-NGTTNANQEPRLVTNFNNIKINRVGCG 2950

Query: 534  SLFSIAYTVP 543
            S  SIA+  P
Sbjct: 2951 SSQSIAWKCP 2960



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 204/402 (50%), Gaps = 31/402 (7%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGW 247
            VY WG N   Q+      +  +P      S ++   +  G+   F + S G   VY  G+
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGK--VYASGY 3603

Query: 248  LGLANTTIQPLPKRVPLEAA---------IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                   I P   + P             I+ ++V+     H L +++ GEVY+WG G+ 
Sbjct: 3604 TESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGR-HCLALSTTGEVYAWGDGDD 3662

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLG GN ++  +P+L+   L  K +  ++ G  HSAA++  G LYTWG+G +GRLGHGD
Sbjct: 3663 GKLGLGNRVTHSKPQLVQS-LSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGD 3721

Query: 359  LKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             +    P LV  L +  V  V+C  G++ T+ ++ D + VWS G G+ GKLGH  +    
Sbjct: 3722 YEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDN-VWSWGDGDYGKLGHNISESCK 3780

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LR---SSSISFHTPVLVTGL 469
             P  IE+L    + ++  G+ FSVAL+ +G ++ WG G   R    SS     P  V+GL
Sbjct: 3781 LPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGL 3840

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
               +IV  S G  HVLAL+   EVYAWG N  GQ G D  ++P+ +P  +  L+   ++Q
Sbjct: 3841 QGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG-DGTAHPIARPRPIAALKGKRIQQ 3899

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREF 571
            +  GS  S A+    +    +S  TP  +   P  + +++EF
Sbjct: 3900 VSCGSAHSFAWASEEACHTDNS--TPTTI---PLEYDILQEF 3936



 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 129/271 (47%), Gaps = 14/271 (5%)

Query: 282  LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
            + V SE  VY WG+ + G+LG  N    +RP      L   +  ++  G      V+ +G
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTF-NEALTALKPIEIVGGSKSLFIVSNEG 2645

Query: 342  LLYTWGEGDHGRLG---HGDLKS-RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
             ++  G+   GRLG    G + S R  P L   +    AV  G  H + LS DG  V S 
Sbjct: 2646 KVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGK-VLSW 2704

Query: 398  GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---- 453
            G G  GKLGH D   + TPK+I++L   RV  +  G++ S A+T DG ++ WG G     
Sbjct: 2705 GDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRL 2764

Query: 454  -RSSSISFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
              S  +S HTP LV       I  V+ G  D+  LAL     VY+WG    G+ G+   S
Sbjct: 2765 GHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGG-S 2823

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +    P KV  L    V QI  G+ FS+A T
Sbjct: 2824 DGCCTPQKVERLVGHRVVQIECGAQFSVALT 2854



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 178/758 (23%), Positives = 299/758 (39%), Gaps = 117/758 (15%)

Query: 36  STLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQ 95
           S L  Q+L  SL  ++ +P     +++ + +  IE+L + S FL Q V      ++K + 
Sbjct: 230 SDLCTQMLKDSLEALQCIPEDYFVDDSNVPTFWIETLERSSKFLFQVVNGNINVSEKEIT 289

Query: 96  SSLRSRVPLTKSLPPYNAALNL------LEEVLRPATHY-----QVDLIRSACLVYLILV 144
           +   + +P T        +L L      L ++L+    +     Q D I S  L  L+ +
Sbjct: 290 NV--NHIPNTDRQFALCLSLELGLQKKSLSQILQCVLMFFELGLQCDKIYSRHLHNLLTI 347

Query: 145 TLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNI----GDTD------------------ 182
           TL   N   +  R  +N N D++ ++   +T +     GD D                  
Sbjct: 348 TLRRLNW--VVSRIQNNFNYDVNHSNKDNVTKSFLRFTGDADNPEPTGMKQTAVMILAFL 405

Query: 183 ----------------ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA 226
                           I    + V  WG   + +   +V     R  ++S+  +   I  
Sbjct: 406 DQIAVTYLTLQRKVHEIKNKKNIVQYWGKQFYPETKKKVILTLERLHVESVVCSRNEI-- 463

Query: 227 GQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTS 286
                        L+V   G L   + +I  L         +   SV    E + L VT 
Sbjct: 464 -------------LVVTTSGTLHFISYSIDSLNFEEKQMMNVPMKSVDVYDETY-LAVTQ 509

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           +GEVYSWGV E G LGHG   S       +       V  VS G    AAVTEDG LY W
Sbjct: 510 KGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMW 569

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES--HTLVLSQDGHTVWSMGSGNL 402
           G+  H           +TP LV  +S+  V  VSCG S  +TL LS++G+ V+S    N 
Sbjct: 570 GKILHSS------NCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGY-VFSFEYRNS 622

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSS 457
            + G +D      P +I  +  + +  +      +  +     VF WG G       ++S
Sbjct: 623 DR-GCDDKSLNVIPSMI--VFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNS 679

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
              + P  V  LS  Q+  +S+ D ++LAL+   +VY WG         DN +    +P 
Sbjct: 680 FRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWGQ-------LDNENTTQCRPV 732

Query: 518 KVVGLEDVCVRQI-CAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYS 576
           K   L +  V++I C+ +     Y     N   S++F     D++  T   + + L    
Sbjct: 733 KC--LMNRQVKKIACSPNQCFAWYDCEEFNVGTSTSFV---TDLQIQTLNYLEQLLSNEF 787

Query: 577 ACFETGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLG--NETAALRHVLFK 634
             ++T  YI +         ++ +L LL+   +  +    S+  +G    +  L  +   
Sbjct: 788 KAYKT--YIDWPPSQQQECVLISVLHLLTLQFHSMINNHVSADTVGLIGSSKLLLSIRQT 845

Query: 635 LVDMETSPEI----ETLLTDCLAIGASLLLPPVVEQLDLLKTLL-------SQDHPLSNG 683
           + D+ ++ +I    +      L +G  +L     E+ ++L T+L        +   +S  
Sbjct: 846 VTDLASNTKIINTVKLAAQKTLEVGWLILFQTPNERANMLCTILQPLTSPNDESQSISGN 905

Query: 684 QRMLLGVITSSLHKNEELAHIFYFDQNQDTNILMLEDL 721
           Q  ++ +IT+SL   + + H F     Q  NI   E  
Sbjct: 906 QEFMINLITNSL-LGDNILHTFLQKAIQRENIQHFESF 942


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  208 bits (530), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 214/421 (50%), Gaps = 35/421 (8%)

Query: 181  TDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTG 238
            TD     S VY WG N   Q+      K   P    + S ++  HI  G    F++   G
Sbjct: 2944 TDAPPQQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEG 3003

Query: 239  GLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWG 294
             L   G+G    LGL +      PK +P  +  V   V+  S   H L +T +G+V+SWG
Sbjct: 3004 KLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 3063

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             GE GKLGHGN  +  +P+LI   L  KR+  ++ G  HSAA+  +G LYTWG G++GRL
Sbjct: 3064 EGEDGKLGHGNCTTLDKPRLIES-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3122

Query: 355  GHGDLKSRHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            GHGD  ++  P LV  LS   V  V+CG  ++ T+ L+ DG  V++ G G+ GKLG   +
Sbjct: 3123 GHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADG-CVYTWGDGDFGKLGRGGS 3181

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFH---TPVL 465
                TP +++ L    V +V  G  FS+ALT  G V+ WG G   R    + H    P L
Sbjct: 3182 DGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTL 3241

Query: 466  VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLED 524
            V GL   +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +PS V  L+D
Sbjct: 3242 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTIVNRKPSLVHELDD 3299

Query: 525  VCVRQICAGSLFSIAYTV--PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETG 582
              + ++  GS  SIA+ +   P+N            +  P TF   R+ L Q   C   G
Sbjct: 3300 TRMNRVSCGSSHSIAWILVDQPTNG-----------NQEPVTFQTARDPLGQM--CLGLG 3346

Query: 583  D 583
            +
Sbjct: 3347 N 3347



 Score =  195 bits (495), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 197/399 (49%), Gaps = 19/399 (4%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYG--- 244
            +Y WG N   Q+      K   P      S +R I+   G+   F + + G +   G   
Sbjct: 3934 IYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGA 3993

Query: 245  KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG+  T    +P  +  ++   +          H L ++SEG VYSWG G+ GKLGH
Sbjct: 3994 AGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            GN LS  RPKL+   L G  +  ++ G  HSAA+T  G LYTWG+G +GRLGHGD   + 
Sbjct: 4054 GNRLSYDRPKLVED-LLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL 4112

Query: 364  TPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P +V  L D  V  V+C  G++ TL ++ D + VWS G G+ GKLG   +     P  I
Sbjct: 4113 RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDN-VWSWGDGDYGKLGRGGSDGCKVPLKI 4171

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
            ++L    V KV  G+ FSVALT  G V+ WG G        +      P  V  L   +I
Sbjct: 4172 DSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 4231

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +A S   EV+ WG N  GQ G D  ++ + +P  V  L+   + ++  GS
Sbjct: 4232 ISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTTSALQRPRLVHALQGKKITRVACGS 4290

Query: 535  LFSIAYTVPPSNSALSSAFTPLCVD-VRPHTFTLIREFL 572
              ++A++   +  +   A  P+  D V+   F+++R  L
Sbjct: 4291 AHTLAWSTAKATQSRMPASAPMEYDLVKEIPFSVLRNRL 4329



 Score =  179 bits (454), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/450 (33%), Positives = 214/450 (47%), Gaps = 32/450 (7%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           V++  S     H L +T +G VYSWG G+ G+LGHG+ +S   PKLI   L  K +  ++
Sbjct: 509 VTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIET-LLEKNIIFIA 567

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHT 384
            G ++SAA++  G LYTWG G++GRLGHG       PTLVT L    V  V+C  G+S T
Sbjct: 568 CGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQT 627

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L ++  G  V+S G G+ GKLG   +    TPK+++ L    V +V  G  FS ALT  G
Sbjct: 628 LCVTASG-IVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686

Query: 445 LVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            V+ WG G        +      P L+  L   +I D+S+G +H+LAL++   VY WG N
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRN 746

Query: 500 TMGQCGQDNFSNP-VDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP-SNSALSSAFTPLC 557
             GQ   D    P V +PS    L    V  + +G   S A+ +   S  A   AF    
Sbjct: 747 DYGQI--DPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAWCMSAWSGGANRVAFV--- 801

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARS 617
           VD+   TF L+   L +       G   P   +   A   L LLRL    +    I A+S
Sbjct: 802 VDICEETFQLLDTLLAKSCEGL-PGIRPPTQDRECLAVATLNLLRLQLHTMLTHNIDAKS 860

Query: 618 SSVLGNETAALRHVLFKLVDMETSPEIETLLTDC----LAIGASLLLPPVVEQLDLLKTL 673
             +    T  L  +  + V++ ++  I   + +     L  G S+LLP   E+   L + 
Sbjct: 861 VGLAATST-LLNSLKQRCVNLASATGILATIQEAAQAVLQTGWSILLPTANERAKTLSSF 919

Query: 674 L--------SQDHPLSNGQRMLLGVITSSL 695
           L              +NGQR +  ++ SSL
Sbjct: 920 LPNTLNNAEQSSSANNNGQRFMADLLVSSL 949



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 131/277 (47%), Gaps = 18/277 (6%)

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            E   L+    G +Y WG    G+LG   G  +    P   +  L   R  Q++ G     
Sbjct: 3922 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSAL---RPIQLAGGEQTLF 3978

Query: 336  AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDG 391
            AVT DG +Y+ G G  GRLG G   S   PTL+  +  V     AV+ G  H L LS +G
Sbjct: 3979 AVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 392  HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
            H V+S G G+ GKLGH +      PK++E L    +  +  G   S A+T  G ++ WG 
Sbjct: 4039 H-VYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097

Query: 452  GL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQC 504
            G         S     P +V  L  ++++DV+   GD+  L ++  + V++WG    G+ 
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4157

Query: 505  GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G+   S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4158 GRGG-SDGCKVPLKIDSLAGLGVIKVECGSQFSVALT 4193


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  207 bits (526), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 154/429 (35%), Positives = 218/429 (50%), Gaps = 28/429 (6%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           +V  WG  L  ++   V G      L SL   +  I   +    +L S+G   VY + + 
Sbjct: 387 EVIAWGL-LGWKLYANVNGPIHCKSLSSL--GVTQIVCSEKGFLILSSSGA--VYTQNY- 440

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
              +TT+ P+         +V L+     + H L ++S GEV+SWG G+ G+LGHG+T  
Sbjct: 441 --KSTTLAPMLIHSLSSRKMVKLAAHPDGQ-HYLALSSNGEVFSWGCGDGGRLGHGDTTY 497

Query: 309 QRRPKLIM---GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              P +I    G   GK V  ++ G ++SAA+T DG LYTWG G++GRLGHG  + + TP
Sbjct: 498 LEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTP 557

Query: 366 TLVTELS--DVGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            LVT L    V  V+C  G++ TL ++++G  VWS G G+ GKLG   +    TPK++E 
Sbjct: 558 MLVTALKGLKVVDVACGSGDAQTLAVTENGQ-VWSWGDGDYGKLGRGGSDGCKTPKLVEK 616

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVD 476
           L+   + KVC G+ FSVALT DG V+ WG G        +      P L+  L   ++VD
Sbjct: 617 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD 676

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           V++G +H LAL+   EV++WGSN   Q     FSN   QP  + GL    +  I  G   
Sbjct: 677 VAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNK-KQPKALPGLNSKHIVGISCGPGQ 735

Query: 537 SIAYTVPPSNSALSSAF-TPLCVDVRPHTFTLIREFLEQYSACFE-TGDYIPFCSKVTHA 594
           S A++   S S  S     P  VDV P TF  +   L Q S   + + D+ P   K    
Sbjct: 736 SFAWS---SCSEWSVGLRVPFVVDVCPMTFEQLDLLLRQVSEGMDGSSDWPPPQEKECMV 792

Query: 595 QFILLLLRL 603
              L LLRL
Sbjct: 793 VATLNLLRL 801



 Score =  196 bits (497), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 211/414 (50%), Gaps = 25/414 (6%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTY--NIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D  +T  L    + G        +KV+ WG N   Q+    
Sbjct: 2688 DEDLATVPFLASDNEEEDDDKAATGSLARKKSSGLESAGTIRTKVFVWGLNDKDQLGGLK 2747

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G +   G+       LGL++ TI P+
Sbjct: 2748 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTI-PI 2806

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 2807 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2866

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LY+WG G++GRLGHGD  ++  P LV  L    V 
Sbjct: 2867 -LKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVI 2925

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 2926 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 2984

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        + +    P +V GL   +IV V++G  H LA++
Sbjct: 2985 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVT 3044

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3045 DTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3096



 Score =  178 bits (451), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/304 (36%), Positives = 157/304 (51%), Gaps = 30/304 (9%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITA 3913

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  V+C  G++ TL L+ D   VW
Sbjct: 3914 SGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDD-DMVW 3972

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +    TP  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3973 SWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYH 4032

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ-----------------YNEV 493
                 S      P  V GL   +++ ++ G  H +  ++                   EV
Sbjct: 4033 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEV 4092

Query: 494  YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSA 552
            Y WG N  GQ G D  +N + +P  V  L+   + ++  GS  ++++ T  P+N+    A
Sbjct: 4093 YTWGDNDEGQLG-DGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTSKPTNAGKLPA 4151

Query: 553  FTPL 556
              P+
Sbjct: 4152 QVPM 4155



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3751 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATL---RPVQLIGGEQTLFAVTA 3807

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3808 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE-VY 3866

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  + AG + S  +T  G +F WG G   
Sbjct: 3867 SWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 3926

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  S     P LV  L  H+++DV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3927 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 3986

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 3987 -SDGCKTPMKIDSLTGLGVIKVECGSQFSVALT 4018


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  206 bits (525), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 225/439 (51%), Gaps = 29/439 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L +++ GEVYSWG G+ G+LGHG+      P LI    G   GK+V Q++ G ++SAA
Sbjct: 457 HFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAA 516

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC--GESHTLVLSQDGH 392
           VT DG LYTWG G++GRLGHG  +   TP LVT L    V  V+C  G++ TL ++++G 
Sbjct: 517 VTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQ 576

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK++E L+   + KVC G+ FSVALT DG V+ WG G
Sbjct: 577 -VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 635

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                   +      P L+  L   ++VD+++G +H LAL+   EV++WGSN   Q    
Sbjct: 636 DNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDT 695

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS-SAFTPLCVDVRPHTFT 566
            F N   QP  + GL    +  I  G   S A++   S S  S     P  VDV   TF 
Sbjct: 696 LFPNK-KQPKALPGLNSKHIVGISCGPGQSFAWS---SCSEWSVGQRVPFVVDVCHMTFE 751

Query: 567 LIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNET 625
            +   L Q S   + + D+ P   K       L LLR L  H  ++   A     LG  +
Sbjct: 752 QLDLLLRQVSEGMDGSSDWPPPQEKECMVVATLNLLR-LQLHAAISNQMAPEELGLGLGS 810

Query: 626 AALRHVLFKLVDMETSP----EIETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQ 676
             L ++   +V + ++      +++     L  G S+LLP   E+   L +LL       
Sbjct: 811 TLLNNLKQTVVTLASNAGVLNTVQSAAQVVLQSGWSVLLPTAEERARALSSLLPNAACGN 870

Query: 677 DHPLSNGQRMLLGVITSSL 695
           +  +S G+R ++ ++ SSL
Sbjct: 871 EMSVSPGRRFMIDLLVSSL 889



 Score =  193 bits (490), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/403 (33%), Positives = 206/403 (51%), Gaps = 25/403 (6%)

Query: 159  SSNSNTDIDSTSTPKLTYNIGDTDISVA--HSKVYTWGCNLHHQILDEVRGKCSRPRLQS 216
            S N   D + T+   L         S A   +KV+ WG N   Q+      K   P    
Sbjct: 2890 SDNEEEDDEKTAAGSLARKKSSGLESAASIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSE 2949

Query: 217  LPS--NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRV-PLEAAI 268
              S  N+  +  G    F +   G +   G+       LGL++ TIQ +P+++  L   +
Sbjct: 2950 TLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQ-IPRQISALSNYV 3008

Query: 269  VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
            V          H + +T +G+V+SWG G+ GKLGH + ++  +P+LI   L  KR+  ++
Sbjct: 3009 VKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIA 3067

Query: 329  AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHT 384
             G SHSAA+T  G LY+WG G++GRLGHGD  ++  P LV  L    V  V+CG  ++ T
Sbjct: 3068 CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQT 3127

Query: 385  LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            L L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G
Sbjct: 3128 LALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3186

Query: 445  LVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            +V+ WG G        + +    P +V GL   +IV V++G  H LA++   +VYAWG N
Sbjct: 3187 VVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3246

Query: 500  TMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
              GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3247 DHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3287



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 3993 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITA 4051

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  V+C  G++ TL L+ D   VW
Sbjct: 4052 SGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDD-DMVW 4110

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4111 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4170

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4171 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4229

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+    A  P+
Sbjct: 4230 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKMPAQVPM 4276



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3889 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATL---RPVQLIGGEQTLFAVTA 3945

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3946 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4004

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  + AG + S  +T  G +F WG G   
Sbjct: 4005 SWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4064

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  S     P LV  L  H+++DV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4065 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4124

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4125 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4156


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
           carolinensis]
          Length = 4839

 Score =  206 bits (524), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 184/339 (54%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEV+SWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   + KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV  G +H LAL++ +EVY+WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D        P+ + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 744 DTLRITKPDPTALPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q +   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVTEGMDGTSDWPPPQEKECMAVATLNLLRL 839



 Score =  194 bits (492), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 212/414 (51%), Gaps = 25/414 (6%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTYNI--GDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D  +T  L      G   ++   +KV+ WG N   Q+    
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKTSGLESVATIRTKVFVWGLNDKDQLGGLK 2980

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LGL++ T+ P+
Sbjct: 2981 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTV-PI 3039

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3040 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LY+WG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3100 -LKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3158

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3159 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3217

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        + +    P +V GL   +I+ V++G  H LA++
Sbjct: 3218 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVT 3277

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+++T
Sbjct: 3278 DTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWT 3329



 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/279 (39%), Positives = 154/279 (55%), Gaps = 13/279 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITA 4113

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4114 AGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 4172

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4291

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSA 548
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+ 
Sbjct: 4292 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAG 4330



 Score =  144 bits (363), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 148/277 (53%), Gaps = 23/277 (8%)

Query: 234 LDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK------CSEAHVLTV 284
           L +TG +  +G    G LG  +T     PK +   +A+      K      C   +   +
Sbjct: 511 LAATGEVFSWGCGDGGRLGHGDTVPLEEPKMI---SALSGKQAGKHVVHIACGSTYSAAI 567

Query: 285 TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGL 342
           T+EGE+Y+WG G +G+LGHG++  Q  P L+  GL G +V  VS  +G + + AVTE+G 
Sbjct: 568 TAEGELYTWGRGNYGRLGHGSSEDQTIPMLVT-GLKGLKVIDVSCGSGDAQTLAVTENGQ 626

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSG 400
           +++WG+GD+G+LG G      TP L+ +L D+    VSCG   ++ L++DG  V+S G G
Sbjct: 627 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQ-VYSWGKG 685

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRS 455
           +  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V+ WG         +
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDT 745

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
             I+   P  + GL S  IV ++ G +   A S  +E
Sbjct: 746 LRITKPDPTALPGLDSKHIVGIACGPAQSFAWSSCSE 782



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3958 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4017

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4018 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L  + V  I AG   S   T 
Sbjct: 4078 HGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
           anatinus]
          Length = 3053

 Score =  206 bits (523), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/339 (39%), Positives = 186/339 (54%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEV+SWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 270

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 271 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 330

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   + KV  G+ FS+ALT DG V+ WG G
Sbjct: 331 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKG 389

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   ++VDV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 390 DNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 447

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       QPS + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 448 DTLRITKPQPSALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 504

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 505 EQLDLLLRQVSEGMDGTSDWPPPQEKECVAVATLNLLRL 543



 Score =  184 bits (468), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 154/279 (55%), Gaps = 13/279 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP+++   L G  V  ++AG +HSA +T 
Sbjct: 2269 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES-LRGIEVVDIAAGGAHSACITV 2327

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LY+WG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 2328 AGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 2386

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 2387 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 2446

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 2447 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 2505

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSA 548
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+ 
Sbjct: 2506 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAG 2544



 Score =  160 bits (405), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 219/467 (46%), Gaps = 55/467 (11%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA--HSKVYTWGC 195
            L+ L  +   D+++  +    S N   D +  +   L         S A   +KV+ WG 
Sbjct: 1097 LIILGRIRAEDEDLAAVPFLASDNEEEDDEKANAGSLIRKKASGLESAATIRTKVFVWGL 1156

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 1157 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 1216

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            G+++ T+ PLP+++  L   +V          H + +T +G+V+SWG G+ GKLGH + +
Sbjct: 1217 GISSGTV-PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 1275

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 1276 NCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 1334

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 1335 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQNIERLN 1393

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----------LRSSSISFHT---------- 462
               V ++  G  FS+ALT  G+V+ WG G           ++S ++S             
Sbjct: 1394 GQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLI 1453

Query: 463  PVLVTGLSSHQIVDVSI-GDSHVLALSQYN-----------EVYAWGSNTMGQCGQDNFS 510
            P+   GL S + +   I G      +S +            EVYAWG N  GQ  Q N +
Sbjct: 1454 PLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQ--QGNGT 1511

Query: 511  NPVD-QPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
              V+ +P+ V GLE   + ++  GS  S+A+T    + A  SA  P+
Sbjct: 1512 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT--VDVAAPSAHEPV 1556



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 146/277 (52%), Gaps = 23/277 (8%)

Query: 234 LDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK------CSEAHVLTV 284
           L +TG +  +G    G LG  +T     PK +   +A+      K      C   +   +
Sbjct: 215 LAATGEVFSWGCGDGGRLGHGDTVPLEEPKMI---SALSGKQAGKHVVHIACGSTYSAAI 271

Query: 285 TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGL 342
           T+EGE+Y+WG G +G+LGHG++  Q  P L+  GL G +V  VS  +G + + AVTE+G 
Sbjct: 272 TAEGELYTWGRGNYGRLGHGSSEDQTIPMLVT-GLKGLKVIDVSCGSGDAQTLAVTENGQ 330

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSG 400
           +++WG+GD+G+LG G      TP L+ +L D+    V CG   ++ L++DG  V+S G G
Sbjct: 331 VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQ-VYSWGKG 389

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRS 455
           +  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG         +
Sbjct: 390 DNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDT 449

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
             I+   P  + GL +  IV ++ G +   A S  +E
Sbjct: 450 LRITKPQPSALPGLDTKHIVGIACGPAQSFAWSSCSE 486



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 2172 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 2231

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    +  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 2232 AGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 2291

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  V  L  + V  I AG   S   TV
Sbjct: 2292 HGNRS-PCDRPRVVESLRGIEVVDIAAGGAHSACITV 2327


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  205 bits (522), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/442 (34%), Positives = 227/442 (51%), Gaps = 36/442 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG---GLYGKRVTQVSAGHSHSAA 336
           H + +TSEGEVYSWG G+ G+LGHG+T S+  P L+ G      G+ V  +  G ++SAA
Sbjct: 250 HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAA 309

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGH 392
           +T DG L+TWG G++GRLGHG  + + TPTLV  L    V  + C  G++ TL ++ DG 
Sbjct: 310 ITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDG- 368

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           TVWS G G+ GKLG   +    TPK+I+ L+   + +VC G  FS+ALT  G ++ WG G
Sbjct: 369 TVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKG 428

Query: 453 LRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             S  +   T      P  + GL   ++VDV++G  H L +++  EVY WG N  GQ G 
Sbjct: 429 -DSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGD 487

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
            +FS   D P+ ++ L+   +  I  G   S  +T   S    S     P  VDV   TF
Sbjct: 488 SSFSTKSD-PT-LMPLDGKSISGIACGPAQSFCWT---STGHWSVGLRVPFVVDVCHGTF 542

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNE 624
             + + L++     +   D+ P   K   A   L LLRL    L+ A+      + L  +
Sbjct: 543 QHLDQLLQRVCEGLDGRSDWPPPQEKECMAVAGLNLLRL---QLHAAITQNEDPARLNLQ 599

Query: 625 TAA--LRHVLFKLVDMETSP----EIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD- 677
             +  L  +  ++V++ ++      ++T     L  G  LLLP   E+   L  LL  D 
Sbjct: 600 PGSPLLNSLKQRVVELASNTGVLGTVQTAAQATLQSGWLLLLPTAEERARALSALLPSDA 659

Query: 678 ----HPLSNGQRMLLGVITSSL 695
                 ++ G+R ++ ++ SSL
Sbjct: 660 SGDGASMTPGRRFMMDLLVSSL 681


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 187/339 (55%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L +++ GEV+SWG G+ G+LGHG+T+    PKLI    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   + KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 744 DTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q +   + + D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVTEGMDGSSDWPPPQEKECMAVATLNLLRL 839



 Score =  194 bits (494), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 211/414 (50%), Gaps = 25/414 (6%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D  +T  L      G    +   +KV+ WG N   Q+    
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLK 2980

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2981 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PI 3039

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H + +T +G+++SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3040 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3100 -LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3158

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3159 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3217

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        + +    P +V GL   +IV V++G  H LA++
Sbjct: 3218 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3277

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3278 DTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITA 4113

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 4172

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4291

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+       P+
Sbjct: 4292 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQVPM 4338



 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  Q  P L+  GL G +V  VS  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVT-GLKGLKVIDVSCGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L D+    V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V++ G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  I+   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4007

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4066

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  + AG + S  +T  G +F WG G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  S     P LV  L  ++++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L D+ V ++  GS FS+A T
Sbjct: 4187 -SDGCKVPMKIDSLTDLGVVKVECGSQFSVALT 4218



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE----AGQFCTFLLDSTGGLL 241
           A  ++YTWG   + ++        + P L +    ++ I+    +G   T  +   G + 
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 242 VYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G    LG   +     PK +     +  + V +C     + +T +G+VY+WG G++
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKV-RCGSQFSIALTKDGQVYTWGKGDN 687

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            +LGHG     R PKL+  GL GK+V  V+AG +H  A+TED  +++WG  D  +     
Sbjct: 688 QRLGHGTEEHVRYPKLLE-GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
             ++  P  +  L    +  ++CG + +   S    + WS+G
Sbjct: 747 RITKPEPAALPGLDTKHIVGIACGPAQSFAWSS--CSEWSIG 786


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
           gallopavo]
          Length = 4815

 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 187/339 (55%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L +++ GEV+SWG G+ G+LGHG+T+    PKLI    G   GK V  ++ G ++SAA
Sbjct: 483 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAA 542

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 602

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   + KV  G+ FS+ALT DG V+ WG G
Sbjct: 603 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKG 661

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 662 DNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 719

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 720 DTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 776

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q +   + + D+ P   K   A   L LLRL
Sbjct: 777 EQLDLLLRQVTEGMDGSSDWPPPQEKECMAVATLNLLRL 815



 Score =  194 bits (494), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/414 (32%), Positives = 211/414 (50%), Gaps = 25/414 (6%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D  +T  L      G    +   +KV+ WG N   Q+    
Sbjct: 2897 DEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLK 2956

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2957 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PI 3015

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H + +T +G+++SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3016 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEA 3075

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3076 -LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3134

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3135 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3193

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        + +    P +V GL   +IV V++G  H LA++
Sbjct: 3194 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3253

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3254 DTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3305



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4031 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITA 4089

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4090 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 4148

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4149 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4208

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4209 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4267

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+       P+
Sbjct: 4268 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQVPM 4314



 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  Q  P L+  GL G +V  VS  +G + 
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVT-GLKGLKVIDVSCGSGDAQ 593

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L D+    V CG   ++ L++DG
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 653

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V++ G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 654 Q-VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 712

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  I+   P  + GL +  IV ++ G +   A S  +E
Sbjct: 713 NDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 758



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE----AGQFCTFLLDSTGGLL 241
           A  ++YTWG   + ++        + P L +    ++ I+    +G   T  +   G + 
Sbjct: 545 AEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 604

Query: 242 VYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G    LG   +     PK +     +  + V +C     + +T +G+VY+WG G++
Sbjct: 605 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKV-RCGSQFSIALTKDGQVYTWGKGDN 663

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            +LGHG     R PKL+  GL GK+V  V+AG +H  A+TED  +++WG  D  +     
Sbjct: 664 QRLGHGTEEHVRYPKLLE-GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
             ++  P  +  L    +  ++CG + +   S    + WS+G
Sbjct: 723 RITKPEPAALPGLDTKHIVGIACGPAQSFAWSS--CSEWSIG 762



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3934 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 3993

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 3994 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L  + V  I AG   S   T 
Sbjct: 4054 HGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITA 4089


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  204 bits (519), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 187/339 (55%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L +++ GEV+SWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   + KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 744 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q +   + + D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVTEGMDGSSDWPPPQEKECMAVATLNLLRL 839



 Score =  195 bits (495), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 214/424 (50%), Gaps = 25/424 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGC 195
            L  L  +   D+++  +    S N   D D  +T  L      G    +   +KV+ WG 
Sbjct: 2911 LSILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRKKAAGLESAATIRTKVFVWGL 2970

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 2971 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 3030

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            G+++ T+ P+P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + +
Sbjct: 3031 GISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRM 3089

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 3090 NCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3148

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 3149 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVS 478
               V ++  G  FS+ALT  G+V+ WG G        + +    P +V GL   +IV V+
Sbjct: 3208 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFS 537
            +G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S
Sbjct: 3268 VGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 538  IAYT 541
            +A+T
Sbjct: 3326 VAWT 3329



 Score =  183 bits (464), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/289 (38%), Positives = 156/289 (53%), Gaps = 16/289 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA +T 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACITA 4113

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 4172

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ W      
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDY 4232

Query: 451  --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
              LG   S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D 
Sbjct: 4233 HRLG-HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DG 4290

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
             +N + +P  V  L+   + ++  GS  ++A+ T  P+N+       P+
Sbjct: 4291 TTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQVPM 4339



 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  Q  P L+  GL G +V  VS  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVT-GLKGLKVIDVSCGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L D+    V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V++ G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  110 bits (274), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4007

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4066

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G +F WG G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  S     P LV  L  ++++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4187 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4218



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE----AGQFCTFLLDSTGGLL 241
           A  ++YTWG   + ++        + P L +    ++ I+    +G   T  +   G + 
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 242 VYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G    LG   +     PK +     +  + V +C     + +T +G+VY+WG G++
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKV-RCGSQFSIALTKDGQVYTWGKGDN 687

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            +LGHG     R PKL+  GL GK+V  V+AG +H  A+TED  +++WG  D  +     
Sbjct: 688 QRLGHGTEEHVRYPKLLE-GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
             ++  P  +  L    +  ++CG + +   S    + WS+G
Sbjct: 747 RVTKPEPAALPGLDTKHIVGIACGPAQSFAWSS--CSEWSIG 786


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  204 bits (519), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 187/339 (55%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L +++ GEV+SWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  + +  P LVT L  +    VSC  G++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   + KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV P TF
Sbjct: 744 DTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q +   + + D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVTEGMDGSSDWPPPQEKECMAVATLNLLRL 839



 Score =  194 bits (494), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/414 (33%), Positives = 211/414 (50%), Gaps = 25/414 (6%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D  +T  L      G    +   +KV+ WG N   Q+    
Sbjct: 2921 DEDLAAVPFLASDNEEEDDDKPNTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLGGLK 2980

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2981 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PI 3039

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3040 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3100 -LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3158

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3159 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3217

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        + +    P +V GL   +IV V++G  H LA++
Sbjct: 3218 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3277

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3278 DTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329



 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 153/279 (54%), Gaps = 13/279 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++ EGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4055 HCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITA 4113

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4114 AGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 4172

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4291

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSA 548
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+ 
Sbjct: 4292 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAG 4330



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  Q  P L+  GL G +V  VS  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVT-GLKGLKVIDVSCGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L D+    V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V++ G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  I+   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 13/222 (5%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE----AGQFCTFLLDSTGGLL 241
           A  ++YTWG   + ++        + P L +    ++ I+    +G   T  +   G + 
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVW 628

Query: 242 VYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G    LG   +     PK +     +  + V +C     + +T +G+VY+WG G++
Sbjct: 629 SWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKV-RCGSQFSIALTKDGQVYTWGKGDN 687

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            +LGHG     R PKL+  GL GK+V  V+AG +H  A+TED  +++WG  D  +     
Sbjct: 688 QRLGHGTEEHVRYPKLLE-GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
             ++  P  +  L    +  ++CG + +   S    + WS+G
Sbjct: 747 RITKPEPAALPGLDTKHIVGIACGPAQSFAWSS--CSEWSIG 786



 Score = 63.2 bits (152), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3958 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4017

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4018 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L  + V  I AG   S   T 
Sbjct: 4078 HGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITA 4113


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
           norvegicus]
          Length = 4779

 Score =  202 bits (515), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/440 (34%), Positives = 225/440 (51%), Gaps = 33/440 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 571

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 572 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 630

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 631 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 688

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+ P TF
Sbjct: 689 DTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICPVTF 745

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
             +   L Q S   + T D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 746 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 805

Query: 620 VLGNETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---S 675
           VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 806 VLLN---SLKQTVVTLASSAGVLSTVQSAAQAVLQSGWSVLLPTAEERARALSALLPCTG 862

Query: 676 QDHPLSNGQRMLLGVITSSL 695
            +  +S G+R ++ ++  SL
Sbjct: 863 NEVNISPGRRFMIDLLVGSL 882



 Score =  194 bits (492), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 212/414 (51%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2870 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2920

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2921 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 2979

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 2980 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3039

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3040 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3098

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3099 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3157

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3158 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3217

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3218 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3269



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3995 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4053

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4054 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4112

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4113 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4172

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4173 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4231

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4232 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4278



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 504 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 562

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 622

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 623 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 681

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 682 NDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWSSCSE 727



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3891 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3947

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3948 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4006

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4007 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4127 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4158



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 457 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 516

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 517 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 576

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 577 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 635

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 636 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 692

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 693 VTKPEPTALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 733


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
           rubripes]
          Length = 4822

 Score =  202 bits (514), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 165/489 (33%), Positives = 241/489 (49%), Gaps = 41/489 (8%)

Query: 232 FLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
           FL+ S+ G  VY + +    +TT+ P+         IV L+     + H L ++S GEV+
Sbjct: 449 FLILSSSGA-VYTQNY---KSTTLAPMLIHSLSSRKIVKLAAHPDGQ-HYLALSSNGEVF 503

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           SWG G+ G+LGHG+      P +I    G   GK V  ++ G ++SA +T DG LYTWG 
Sbjct: 504 SWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGR 563

Query: 349 GDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGK 404
           G++GRLGHG  + + TP LVT L    V  V+CG  ++ TL ++++G  VWS G G+ GK
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQ-VWSWGDGDYGK 622

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSIS 459
           LG   +    TPK++E L+   + KVC G+ FSVALT DG V+ WG G        +   
Sbjct: 623 LGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH 682

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              P L+  L   ++VDV++G +H LAL+   EV++WGSN   Q   D  SN   QP  +
Sbjct: 683 VRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQ-HFDTLSNK-KQPKAL 740

Query: 520 VGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTFTLIREFLEQYSAC 578
            GL+ +    I  G   S A++   S S  S     P  VDV P TF  +   L Q S  
Sbjct: 741 PGLKHIV--GISCGPGQSFAWS---SCSEWSVGLRVPFVVDVCPMTFEQLDLLLRQVSEG 795

Query: 579 FE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGA-----RSSSVLGNETAALRHVL 632
            + T D+ P   K       L LLRL    L+ A+            +       L+  +
Sbjct: 796 MDGTSDWPPPQEKECMVVATLNLLRL---QLHAAISNQVDPDRLGLGLGSVLLNNLKQTI 852

Query: 633 FKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQDHPLSNGQRM 686
             L  +      ++      L  G S+LLP   E+   L +LL       +  +S G+R 
Sbjct: 853 VVLASNAGVLNTVQAAAQAVLQSGWSVLLPTAEERARALSSLLPNTASGNEMSVSPGRRF 912

Query: 687 LLGVITSSL 695
           ++ ++ SSL
Sbjct: 913 MIDLLVSSL 921



 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/414 (33%), Positives = 212/414 (51%), Gaps = 25/414 (6%)

Query: 148  DDNIKPLGDRKSSNSNTDIDSTSTPKLTY--NIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            D+++  +    S N   D D T+T  L    + G        +KV+ WG N   Q+    
Sbjct: 2903 DEDVATVPFLASDNEEEDDDKTATGSLARKKSSGLESAGTIRTKVFVWGLNDKDQLGGLK 2962

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G +   G+       LGL++ TI P+
Sbjct: 2963 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTI-PI 3021

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3022 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3081

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LY+WG G++GRLGHGD  ++  P LV  L    V 
Sbjct: 3082 -LKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVI 3140

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3141 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3199

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        + +    P +V GL   +IV V++G  H LA++
Sbjct: 3200 AQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVT 3259

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3260 DTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3311



 Score =  189 bits (479), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITA 4096

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G L+TWG+G +GRLGHGD + +  P LV  L    V  V+C  G++ TL L+ D   VW
Sbjct: 4097 SGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDD-DMVW 4155

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4156 SWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYH 4215

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4216 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4274

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+    A  P+
Sbjct: 4275 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPM 4321



 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3934 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATL---RPVQLIGGEQTLFAVTA 3990

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3991 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE-VY 4049

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  + AG + S  +T  G +F WG G   
Sbjct: 4050 SWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  S     P LV  L  H+++DV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4110 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4169

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4170 -SDGCKIPMKIDSLTGLGVTKVECGSQFSVALT 4201


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  202 bits (514), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 199/392 (50%), Gaps = 30/392 (7%)

Query: 166  IDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--H 223
            ++   +P +  NI          KV+ WG N   Q+      K   P+   + SN++  +
Sbjct: 2638 VNQMGSPSMRENI--------ECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMN 2689

Query: 224  IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
            I  G    F++   G +   G+G      LG ++   QP P    L    +         
Sbjct: 2690 IAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKP-LTDLSPYFIKKVAVHSGG 2748

Query: 279  AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
             H L +T +G V+SWG GE GKLGHGN +S  RPKL+   L  KR+  V+ G SHSAAVT
Sbjct: 2749 RHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVES-LKCKRIRDVACGSSHSAAVT 2807

Query: 339  EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG--ESHTLVLSQDGHTV 394
              G LYTWG G++GRLGHGD   +  P  V  LS   V  V+CG  ++ TL L++  H V
Sbjct: 2808 SSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTER-HWV 2866

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
            +S G G+ GKLG   +   + P+ +E L   +V +V  G  FS+AL+ +G V+ WG G  
Sbjct: 2867 YSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDY 2926

Query: 453  LR---SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             R    S      P +V  L+   ++ VS+G  H +A++   EVYAWG N  GQ G  N 
Sbjct: 2927 FRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGN- 2985

Query: 510  SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +    +P+ V GLE   +  +  GS  S+A++
Sbjct: 2986 TTVNRKPAIVRGLE--AITNVACGSSHSVAWS 3015



 Score =  186 bits (471), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 162/292 (55%), Gaps = 13/292 (4%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            L+  IV+         H L +TS G+V+SWG G+ GKLGHG+     RPKLI   L  K 
Sbjct: 3701 LQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES-LRDKH 3759

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC-- 379
            V  V+ G +HSA +T  G LYTWG+G +GRLGHGD + +  P  V EL+  +V  V+C  
Sbjct: 3760 VVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGS 3819

Query: 380  GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            G++ TL +S+DG  VWS G G+ GKLG   +     P+ I++L+   V KV  G+ FSVA
Sbjct: 3820 GDAQTLCVSRDG-LVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVA 3878

Query: 440  LTWDGLVFWWGLG-----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEV 493
            LT  G+V+ WG G        S      P  V G L   +++ V++G  H +A +   EV
Sbjct: 3879 LTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEV 3938

Query: 494  YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            + WG N  GQ G D  +N + +P  V  L+   + ++  GS  +++++   S
Sbjct: 3939 FTWGDNDEGQLG-DGSTNAIQRPKLVASLKGKKMNRVACGSAHTVSWSTSKS 3989



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 2/146 (1%)

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            G LG   +    LP+ V    +   + V +C     L ++  G+V++WG G++ +LGHG+
Sbjct: 2875 GKLGKGGSDGSSLPQNVETLNSQQVIQV-ECGAQFSLALSKNGKVWTWGKGDYFRLGHGS 2933

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
                R P+++   L  K V QVS G  H  AVT+ G +Y WG+ DHG+ G+G+      P
Sbjct: 2934 DSHVRWPQVVEE-LADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKP 2992

Query: 366  TLVTELSDVGAVSCGESHTLVLSQDG 391
             +V  L  +  V+CG SH++  S  G
Sbjct: 2993 AIVRGLEAITNVACGSSHSVAWSSTG 3018


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  202 bits (513), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 197/399 (49%), Gaps = 30/399 (7%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYG--- 244
            +Y WG N   Q+      K   P      +++R I+   G+   F + + G L   G   
Sbjct: 3183 IYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGA 3242

Query: 245  KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS----EAHVLTVTSEGEVYSWGVGEHGK 300
             G LG+  T     P    L  +I  + + K +      H L ++ EGEVYSWG GE GK
Sbjct: 3243 SGRLGIGGTDSVSTPT---LLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHGN     RP++I   L GK V  ++ G +HSA VT  G LYTWG+G +GRLGHGD +
Sbjct: 3300 LGHGNRTQCDRPRVIES-LRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSE 3358

Query: 361  SRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
             +  P +   L    V  V+C  G+S TL +S D + VWS G G+ GKLG   +     P
Sbjct: 3359 DQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDN-VWSWGDGDYGKLGRGGSDGCKVP 3417

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSS 471
            + ++AL    V KV  G+ FS+ALT  G V+ WG G        S      P  V  L  
Sbjct: 3418 QKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQG 3477

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +I+ ++ G  H +A S   EVY WG N  GQ G D  +N + +P  V  L+D  +  + 
Sbjct: 3478 KKIISIATGSLHCVACSDQGEVYTWGDNDEGQLG-DGTTNAIQRPRIVTALQDKKITNVA 3536

Query: 532  AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
             GS  ++A++   ++  L +   P  V   P  + L+RE
Sbjct: 3537 CGSAHTVAWS---TSKPLHAGRLPQTV---PMEYNLLRE 3569



 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 201/385 (52%), Gaps = 20/385 (5%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHI--EAGQFCTFLLDSTGGLLVYG 244
             +KV+ WG N   Q+      K   P L    S+++ +    G    F++ + G +   G
Sbjct: 2205 QTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACG 2264

Query: 245  KG---WLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            +G    LGL ++    +PK+V  L   +V          H + +T +G+V+SWG G+ GK
Sbjct: 2265 EGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGH + ++  +P+L+   L  KR+  ++ G SHSAAVT  G LYTWG G++GRLGHGD  
Sbjct: 2325 LGHLSRMNCEKPRLLEA-LKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDST 2383

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +   + P
Sbjct: 2384 TQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEG-MVYSWGDGDFGKLGRGGSEGCSVP 2442

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSS 471
              +E L    V ++  G  FS+ALT  G V+ WG G        +      P +  GL  
Sbjct: 2443 HNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKG 2502

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +I+ V++G  H LA++   +V+AWG N  GQ G D  +    +P+ V GLE V + ++ 
Sbjct: 2503 KKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG-DGSTTVNKKPALVQGLEGVRITRVA 2561

Query: 532  AGSLFSIAYTVPPSNSALSSAFTPL 556
             GS  S A+    +++A+ S   P+
Sbjct: 2562 CGSSHSTAWAT--TDTAIPSMHEPV 2584



 Score =  128 bits (321), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 134/282 (47%), Gaps = 14/282 (4%)

Query: 271  LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
            L +++ S+   L+    G +Y WG    G+LG       + P  I   L   R  Q+  G
Sbjct: 3164 LWMNRRSDDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIE-SLTSLRPIQIVGG 3222

Query: 331  HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLV 386
                 AVT DG LY  G G  GRLG G   S  TPTL+  +  V     AV+ G  H L 
Sbjct: 3223 EQTLFAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALA 3282

Query: 387  LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
            LS +G  V+S G G  GKLGH +  +   P+VIE+LR   V  +  G + S  +T  G +
Sbjct: 3283 LSVEGE-VYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGEL 3341

Query: 447  FWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSN 499
            + WG G         S     P +   L  ++++DV+   GDS  L +S  + V++WG  
Sbjct: 3342 YTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDG 3401

Query: 500  TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              G+ G+   S+    P KV  L  + V ++  GS FSIA T
Sbjct: 3402 DYGKLGRGG-SDGCKVPQKVDALSSIGVCKVECGSQFSIALT 3442



 Score = 49.7 bits (117), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHS--HSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           N+  Q  PKL+  GL  ++   ++ G +   + AVT+ GLL+++G GD+G+LG G     
Sbjct: 1   NSDDQLTPKLV-SGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGC 59

Query: 363 HTPTLVTELSDVGAV--SCGESHTLVLSQDG 391
             P LV +L    AV   CG   +++L++ G
Sbjct: 60  KLPKLVDKLQGQHAVIACCGNQFSVILTKTG 90



 Score = 43.1 bits (100), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 364 TPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           TP LV+ L +      A+   +  TL ++  G  ++S G+G+ GKLG   +     PK++
Sbjct: 7   TPKLVSGLKEQKFVHIALGSNDGQTLAVTDTG-LLFSFGNGDYGKLGRGGSDGCKLPKLV 65

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVF 447
           + L+       C G  FSV LT  G V+
Sbjct: 66  DKLQGQHAVIACCGNQFSVILTKTGTVY 93



 Score = 42.4 bits (98), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           ++   L VT  G ++S+G G++GKLG G +   + PKL+   L G+       G+  S  
Sbjct: 27  NDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLV-DKLQGQHAVIACCGNQFSVI 85

Query: 337 VTEDGLLYT 345
           +T+ G +YT
Sbjct: 86  LTKTGTVYT 94


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
           [Equus caballus]
          Length = 4840

 Score =  201 bits (511), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +PS + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/278 (40%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  +  V+AG +HSA VT 
Sbjct: 4056 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIELVDVAAGGAHSACVTA 4114

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4115 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4173

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4174 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4233

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4234 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4292

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
            N + +P  V  L+   V ++  GS  ++A++     SA
Sbjct: 4293 NAIQRPRLVPALQGKKVNRVACGSAHTLAWSTSKPASA 4330



 Score =  185 bits (469), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 185/338 (54%), Gaps = 21/338 (6%)

Query: 220  NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSV 273
            N+  +  G    F +   G     G    G+  LG+++ T+ P+P++V  L + +V    
Sbjct: 2997 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PIPRQVTALSSYVVKKVA 3055

Query: 274  SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
                  H   +T +G+V+SWG G+ GKLGH + ++  +P+LI   L  KR+  ++ G SH
Sbjct: 3056 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSH 3114

Query: 334  SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQ 389
            SAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V  V+CG  ++ TL L+ 
Sbjct: 3115 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 390  DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            +G  V+S G G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G+V+ W
Sbjct: 3175 EG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3233

Query: 450  GLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
            G G        S +    P +V GL   +IV V++G  H LA++   +VYAWG N  GQ 
Sbjct: 3234 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ- 3292

Query: 505  GQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
             Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3293 -QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3329



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3952 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4008

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4009 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4067

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   +  V AG + S  +T  G ++ WG G   
Sbjct: 4068 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYG 4127

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4128 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4188 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4219


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  201 bits (511), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 184/339 (54%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +PS + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A  +L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVAMLNLLRL 839



 Score =  194 bits (492), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 215/424 (50%), Gaps = 25/424 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGC 195
            L+ L  +   ++++  +    S N   + D  S+  L      G    +   +KV+ WG 
Sbjct: 2909 LIILGRIRAEEEDLAAVPFLASDNEEEEDDKGSSGSLMRKKAAGLESAATIRTKVFVWGL 2968

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 2969 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 3028

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            GL++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + +
Sbjct: 3029 GLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3087

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 3088 NCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3146

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 3147 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3205

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVS 478
               V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL   +IV V+
Sbjct: 3206 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3265

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFS 537
            +G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S
Sbjct: 3266 VGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3323

Query: 538  IAYT 541
            +A+T
Sbjct: 3324 VAWT 3327



 Score =  186 bits (473), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 113/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP+++   L G  V  V+AG +HSA VT 
Sbjct: 4054 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES-LRGIEVVDVAAGGAHSACVTA 4112

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4113 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4171

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4172 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4231

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4232 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4290

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4291 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSTGKLPAQVPM 4337



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3950 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTLFAVTA 4006

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4007 DGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGE-VY 4065

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+V+E+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4066 SWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4126 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4186 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4217



 Score =  104 bits (259), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPSALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/340 (38%), Positives = 185/340 (54%), Gaps = 23/340 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG  
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LGL +       P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC  
Sbjct: 686 DNQRLGLGTEE-HVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQH 742

Query: 507 -DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHT 564
            D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   T
Sbjct: 743 FDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMT 799

Query: 565 FTLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
           F  +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 800 FEQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  194 bits (492), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 212/414 (51%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2927 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2977

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2978 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 3036

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3037 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3096

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3097 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3155

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3156 QVACGTRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3214

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3215 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3274

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3275 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  187 bits (474), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4110

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4169

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4170 SWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4288

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4289 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4335



 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LG      V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL S  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE 782



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4004

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4063

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4184 -SDGSKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 137/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G G  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 691 GLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPTALPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+TL    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  187 bits (474), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3941 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3999

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4000 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDD-DTVW 4058

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4059 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4118

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4119 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4177

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4178 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4224



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 163/326 (50%), Gaps = 17/326 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGC 195
            L+ L  +   ++++  +    S N   D D  S+  L      G    +   +KV+ WG 
Sbjct: 2908 LILLGRIRAEEEDLAAVPFLASDNEEEDDDKGSSGSLIRKKAAGLESAATIRTKVFVWGL 2967

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 2968 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 3027

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            GL++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + +
Sbjct: 3028 GLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 3087 NCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 3146 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWW 449
               V ++  G  FS+ALT  G+V+ W
Sbjct: 3205 GQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 15/265 (5%)

Query: 289  EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            +V+ WG+ +  +LG G   S+ +       L    V QV+ G     AVT +G +Y  GE
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 349  GDHGRLGHG-DLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLG 403
              +GRLG G    +   P  +T LS       AV  G  H   L+ DG  V+S G G+ G
Sbjct: 3020 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK-VFSWGEGDDG 3078

Query: 404  KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSI 458
            KLGH        P++IEAL+  R+R +  G+S S ALT  G ++ WGLG         + 
Sbjct: 3079 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 3138

Query: 459  SFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
            +   P +V  L  H+++ V+ G  D+  LAL+    V++WG    G+ G+   S   + P
Sbjct: 3139 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIP 3197

Query: 517  SKVVGLEDVCVRQICAGSLFSIAYT 541
              +  L    V QI  G+ FS+A T
Sbjct: 3198 QNIERLNGQGVCQIECGAQFSLALT 3222



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3837 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPIQLIGGEQTLFAVTA 3893

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3894 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3952

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3953 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4012

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4013 RLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4073 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4104



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 117/228 (51%), Gaps = 14/228 (6%)

Query: 281  VLTVTSEGEVYSWGVGEHGKLGHG---NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            +  VT EG+VY+ G   +G+LG G    T+   R    +     K+V  V +G  H+ A+
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVA-VHSGGRHATAL 3063

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
            T DG +++WGEGD G+LGH    +   P L+  L    +  ++CG SH+  L+  G  ++
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE-LY 3122

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLG- 452
            + G G  G+LGH D      PK+++ L   RV +V  G+  + ++ALT +GLVF WG G 
Sbjct: 3123 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3182

Query: 453  ----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
                 R  S   + P  +  L+   +  +  G    LAL++   V+ W
Sbjct: 3183 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPTALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 184/339 (54%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI---MGGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PKLI    G   G+RV  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK++E L+   V KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV   TF
Sbjct: 744 DTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLDLLRL 839



 Score =  134 bits (336), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP LV +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 GLRSSSI-SFHT----PVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
             +     + H     P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRL------QSLPSNIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P+L      +     + HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKL+   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLVE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT  
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLH 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
            T P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 ATKPEPAALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 55/222 (24%)

Query: 374 VGAVSCGESHTLVLSQ----------------------------------DGH------- 392
           V  ++C E   L+LS+                                  DGH       
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSDALAPQLVQGLVSRNIVKIAAHSDGHHYLALAA 513

Query: 393 --TVWSMGSGNLGKLGHEDTGKVTTPKVIEAL----RKFRVRKVCAGTSFSVALTWDGLV 446
              V+S G G+ G+LGH DT  +  PK+I A        RV  +  G+++S A+T +G +
Sbjct: 514 TGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGEL 573

Query: 447 FWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSN 499
           + WG G        SS     P+LV GL   +++DV+   GD+  LA+++  +V++WG  
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG 633

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             G+ G+   S+    P  V  L+D+ V ++  GS FS+A T
Sbjct: 634 DYGKLGRGG-SDGCKTPKLVEKLQDLDVVKVRCGSQFSVALT 674


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 152/440 (34%), Positives = 224/440 (50%), Gaps = 33/440 (7%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
            H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 575  HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 634

Query: 337  VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
            +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 635  ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 694

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
             VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 695  -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 753

Query: 453  -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                    +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 754  DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 811

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
            D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 812  DTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 868

Query: 566  TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
              +   L Q S   + T D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 869  EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 928

Query: 620  VLGNETAALRHVLFKLVDME-TSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---S 675
            VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 929  VLLN---SLKQTVVTLASSAGVLSTVQSAAQAVLQSGWSVLLPTAEERARALSALLPCTG 985

Query: 676  QDHPLSNGQRMLLGVITSSL 695
             +  +S G+R ++ ++  SL
Sbjct: 986  NEVNISPGRRFMIDLLVGSL 1005



 Score =  194 bits (492), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 212/414 (51%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2993 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 3043

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 3044 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 3102

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3103 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3162

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3163 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3221

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3222 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3280

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3281 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3340

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3341 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3392



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4118 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4176

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4177 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4235

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4236 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4295

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4296 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4354

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4355 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4401



 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 627 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 685

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 686 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 745

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 746 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 804

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL S  IV ++ G +   A S  +E
Sbjct: 805 NDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE 850



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 4014 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4070

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4071 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4129

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4130 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4189

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4190 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4250 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4281



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 580 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 639

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 640 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 699

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 700 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 758

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 759 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 815

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 816 VTKPEPTALPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 856


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
           RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
           musculus]
          Length = 4841

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 512 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 571

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 572 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 631

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 632 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 690

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 691 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 748

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 749 DTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 805

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 806 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 844



 Score =  194 bits (492), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 212/414 (51%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2932 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2982

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2983 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 3041

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3042 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3101

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3102 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3160

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3161 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3219

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3220 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3279

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3280 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3331



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4057 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4115

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4116 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4174

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4175 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4234

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4235 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4293

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4294 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4340



 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 564 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 622

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 623 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 682

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 683 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 741

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL S  IV ++ G +   A S  +E
Sbjct: 742 NDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE 787



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3953 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4009

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4010 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4068

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4069 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4129 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4189 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4220



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 517 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 576

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 577 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 636

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 637 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 695

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 696 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 752

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 753 VTKPEPTALPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 793


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
           catus]
          Length = 4844

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2966 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3025

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3026 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3085 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3143

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3144 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3202

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3203 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3262

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3263 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3320

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3321 RVACGSSHSVAWT 3333



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4060 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4118

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4119 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDD-DTVW 4177

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4178 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4237

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4238 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4296

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4297 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4343



 Score =  137 bits (344), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3956 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4012

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4013 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4071

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4072 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4131

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H +VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4132 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4192 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4223


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 223/440 (50%), Gaps = 34/440 (7%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H + +TS+GEV+SWG G+ GKLGHG+  +   P LI G L GK+V ++  G S+S A+T 
Sbjct: 630  HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSSYSVALTS 688

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTV 394
            +G +Y+WG+G+ GRLGHG  + + TP L+       + DV A   G++ TL ++  G  V
Sbjct: 689  NGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDV-ACGSGDAQTLAVTDSG-AV 746

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
            +S G G+ GKLG        TPKVIE L    V +V  G  FS+ALT  G V+ WG    
Sbjct: 747  YSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDN 806

Query: 451  --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
              LG  +   + H P  +  LSS ++ D++IG  H +A+++  E+Y WG N  GQ G  +
Sbjct: 807  YRLGHGTEDHARH-PKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPS 865

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLI 568
             SN   +P+ + G+E   +  +  G   + A+T       + S+  P  VDV   TF  +
Sbjct: 866  ISN-FTEPTLIGGMEGKNIIGVACGPTQTFAWT--SGGQWIVSSRVPFIVDVCKSTFEQL 922

Query: 569  REFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNE--- 624
             E L +     +   D+ P   K   A   +  L LL+   Y  +  + S+  LG     
Sbjct: 923  DELLGEVCVDMDGQSDWPPPQDKECLA---VAGLNLLNLQFYATICQSESTEGLGLGPGS 979

Query: 625  ---TAALRHVLFKLVDMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD---- 677
               T+  + V+    ++     ++    + L  G S+LLP   E+   L TLLS +    
Sbjct: 980  PLVTSLKQRVVSLASNVGVINTVQLAAQNALQSGWSILLPTAEERARTLSTLLSNEVVGH 1039

Query: 678  --HPLSNGQRMLLGVITSSL 695
                +S GQR +  ++ SSL
Sbjct: 1040 DASIMSPGQRFMTDLLVSSL 1059



 Score =  194 bits (494), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/285 (40%), Positives = 161/285 (56%), Gaps = 15/285 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +++EGEVYSWG GE GKLGHGN     RP++I   L GK V  ++AG +HSA +T 
Sbjct: 4559 HCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVI-DSLRGKEVVDIAAGGAHSACITA 4617

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SC--GESHTLVLSQDGHTVW 395
            +G LYTWG+G +GRLGHGD + +  P LV  L     V  +C  G++ TL ++ D + VW
Sbjct: 4618 NGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN-VW 4676

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE L+   V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4677 SWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYH 4736

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V+ L + +++DV+ G  H +A +   EV++WG N  GQ G D  +
Sbjct: 4737 RLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG-DGTT 4795

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
            N + +P  V  L    + ++  GS  S+A++   +N A+S+   P
Sbjct: 4796 NAIQRPRLVASLLGKKINRVACGSAHSLAWS---TNKAVSAGKLP 4837



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/371 (34%), Positives = 192/371 (51%), Gaps = 20/371 (5%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
             + V+ WG N   Q+      K   P L    S +R   I  G    F +   G +   G
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACG 3522

Query: 245  K---GWLGLANTT-IQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
            +   G LGL  TT    +P+++  L   ++          H L +T++G+V+SWG G+ G
Sbjct: 3523 EATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDG 3582

Query: 300  KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            KLGH +  +  +P+LI   L  KRV  ++ G SHSAA+T +G LYTWG G++GRLGHGD 
Sbjct: 3583 KLGHFSRWNCDKPRLIEA-LKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDN 3641

Query: 360  KSRHTPTLVTELS--DVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
             ++  P  V  L+   V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     
Sbjct: 3642 TTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGK-VYSWGDGDFGKLGRGGSEGCNV 3700

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLS 470
            P  ++ LR  +V ++  G  FS+ALT  G V+ WG G        +      P +V GL 
Sbjct: 3701 PHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLK 3760

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
              +IV V++G  H LA++   +V+AWG N  GQ  Q N +  V++   +V LE   + ++
Sbjct: 3761 GKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQ--QGNGTTTVNRKPALVVLEGYKISKV 3818

Query: 531  CAGSLFSIAYT 541
              GS  SIA+ 
Sbjct: 3819 ACGSSHSIAWA 3829



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 148/334 (44%), Gaps = 66/334 (19%)

Query: 271  LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN-----------TLSQRRPKLIMGG- 318
            L +++  E   L+    G+++ WG    G+LG  +            L+  RP  ++GG 
Sbjct: 4444 LWLNRKPEEWTLSWGGSGQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGE 4503

Query: 319  ------------------------------------------LYGKRVTQVSAGHSHSAA 336
                                                      ++ K++  V++G  H  A
Sbjct: 4504 QTLFAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLA-VNSGGKHCLA 4562

Query: 337  VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTV 394
            ++ +G +Y+WGEG+ G+LGHG+      P ++  L   +V  ++ G +H+  ++ +G  +
Sbjct: 4563 LSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGE-L 4621

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLG 452
            ++ G G  G+LGH D+     PK++EAL+ +RV  +  G+  + ++ +T D  V+ WG G
Sbjct: 4622 YTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDG 4681

Query: 453  -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                  R  S     P+ +  L    ++ V  G    +AL++   VY WG     + G  
Sbjct: 4682 DYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG 4741

Query: 508  NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +  + V +P KV  L++  V  +  GSL  +A T
Sbjct: 4742 S-DDHVRRPRKVSALQNKKVIDVACGSLHCVACT 4774


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
           catus]
          Length = 4837

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3019 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3078 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3195

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4053 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4111

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDD-DTVW 4170

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4171 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4289

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4290 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4336



 Score =  136 bits (343), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3949 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4005

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4006 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4064

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4065 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H +VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4185 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  194 bits (492), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 212/414 (51%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2927 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2977

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2978 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 3036

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3037 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3096

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3097 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3155

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3156 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3214

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3215 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3274

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3275 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4110

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4169

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4170 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4288

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4289 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4335



 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL S  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4004

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4063

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4184 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPTALPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  200 bits (508), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 484 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 543

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 544 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 603

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 604 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 662

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 663 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 720

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 721 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 777

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 778 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 816



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2936 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2995

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2996 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3055 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3113

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3114 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3172

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3173 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3232

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3233 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3290

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3291 RVACGSSHSVAWT 3303



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4030 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4088

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4089 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4147

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4148 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4207

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4208 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4266

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4267 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4313



 Score =  137 bits (344), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 536 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 594

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 595 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 654

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 655 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 713

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 714 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 759



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3926 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3982

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3983 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4041

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4042 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4101

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4102 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4162 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4193



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 489 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 548

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 549 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 608

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 609 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 667

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 668 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 724

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 725 VTKPEPAALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 765


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Ailuropoda melanoleuca]
          Length = 4837

 Score =  200 bits (508), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3019 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3078 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3195

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4053 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4111

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4170

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4171 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4289

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4290 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4336



 Score =  137 bits (344), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3949 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4005

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4006 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4064

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4065 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4185 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPAALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
           familiaris]
          Length = 4837

 Score =  200 bits (508), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  192 bits (488), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LGL++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3019 EATNGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3078 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3195

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4053 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4111

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4170

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4171 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4289

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4290 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4336



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3949 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4005

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4006 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4064

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4065 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4185 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  200 bits (508), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  199 bits (507), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 224/442 (50%), Gaps = 35/442 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
             +   L Q S   + + D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 859

Query: 620 VLGNETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---- 674
           VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 860 VLLN---SLKQTVVTLASSAGVLSTVQSAAQSVLQSGWSVLLPTAEERARALSALLPCAV 916

Query: 675 -SQDHPLSNGQRMLLGVITSSL 695
              D  +S G+R ++ ++  SL
Sbjct: 917 SGNDVNISPGRRFMIDLLVGSL 938



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2953 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3012

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3013 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3072 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3130

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3131 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3189

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3190 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3249

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3250 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3307

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3308 RVACGSSHSVAWT 3320



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4045 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4103

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4104 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4162

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4163 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4222

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4223 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4281

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4282 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4328



 Score =  137 bits (344), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3941 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3997

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3998 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4056

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4057 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4116

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4117 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4177 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4208


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  199 bits (507), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 224/442 (50%), Gaps = 35/442 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
             +   L Q S   + + D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 859

Query: 620 VLGNETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---- 674
           VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 860 VLLN---SLKQTVVTLASSAGVLSTVQSAAQSVLQSGWSVLLPTAEERARALSALLPCAV 916

Query: 675 -SQDHPLSNGQRMLLGVITSSL 695
              D  +S G+R ++ ++  SL
Sbjct: 917 SGNDVNISPGRRFMIDLLVGSL 938



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 182/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +PS + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K       L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMTVATLNLLRL 839



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3019 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3078 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3195

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4053 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTA 4111

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4112 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4170

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4171 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4230

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  S+  EVY WG N  GQ G D  +
Sbjct: 4231 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTT 4289

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
            N + +P  V  L+   V ++  GS  ++A++     SA
Sbjct: 4290 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASA 4327



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3956 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYG 4015

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4016 AGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L    V  + AG   S   T 
Sbjct: 4076 HGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTA 4111


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 468 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 527

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 528 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 587

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 588 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 646

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 647 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 704

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 705 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 761

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 762 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 800



 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 520 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 578

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 579 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 638

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 639 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 697

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 698 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 743


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
           mulatta]
          Length = 4840

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 224/442 (50%), Gaps = 35/442 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
             +   L Q S   + + D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 859

Query: 620 VLGNETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---- 674
           VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 860 VLLN---SLKQTVVTLASSAGVLSTVQSAAQSVLQSGWSVLLPTAEERARALSALLPCAV 916

Query: 675 -SQDHPLSNGQRMLLGVITSSL 695
              D  +S G+R ++ ++  SL
Sbjct: 917 SGNDVNISPGRRFMIDLLVGSL 938



 Score =  191 bits (485), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4081 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4139

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4140 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4198

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4199 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4258

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4259 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4317

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4318 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4364



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3977 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4033

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4034 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4092

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4093 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4152

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4153 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4213 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4244


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 616

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 617 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 675

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 676 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 733

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 734 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 790

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 791 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 829



 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 607

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 668 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 726

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 727 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 772


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
            H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 767  HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAA 826

Query: 337  VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
            +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 827  ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 886

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
             VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 887  -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 945

Query: 453  -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                    +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 946  DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 1003

Query: 507  DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
            D       +P+ + GL+   +  I  G   S A++   S S  S     P  VDV   TF
Sbjct: 1004 DTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDVCSMTF 1060

Query: 566  TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
              +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 1061 EQLDLLLRQVSEGMDGTADWPPPQEKECVAVATLNLLRL 1099



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 3219 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3278

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LGL++ T+ P+P++V  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3279 EATNGRLGLGLSSGTV-PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3337

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3338 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3396

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3397 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3455

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3456 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3515

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3516 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVHGLEGQKIT 3573

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3574 RVACGSSHSVAWT 3586



 Score =  187 bits (474), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4309 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVADVAAGGAHSACVTA 4367

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4368 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4426

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4427 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4486

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4487 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4545

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4546 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4592



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
            C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 819  CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 877

Query: 334  SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
            + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 878  TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 937

Query: 392  HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
              V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 938  Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 996

Query: 452  G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                    +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 997  NDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWSSCSE 1042



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 4205 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4261

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4262 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4320

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4321 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4441 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4472



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
             A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 772  AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEG 831

Query: 239  GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
             L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 832  ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 891

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 892  DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 950

Query: 355  GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
            GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 951  GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 1007

Query: 413  VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
            VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 1008 VTKPEPTALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 1048


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 182/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +PS + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K       L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMTVATLNLLRL 839



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2959 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3019 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3078 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3137 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3195

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3196 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3255

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3256 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3313

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3314 RVACGSSHSVAWT 3326



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTA 4110

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4169

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4170 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  S+  EVY WG N  GQ G D  +
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTT 4288

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
            N + +P  V  L+   V ++  GS  ++A++     SA
Sbjct: 4289 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASA 4326



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3955 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYG 4014

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4015 AGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L    V  + AG   S   T 
Sbjct: 4075 HGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTA 4110


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/439 (33%), Positives = 220/439 (50%), Gaps = 29/439 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +PS + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSK--VTHAQFILLLLRLLSSHLYLALIGARSSSVLG 622
             +   L Q S   + T D+ P   K  +T A   LL L+L ++  +          +  
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKEWMTVATLNLLRLQLHAAISHQVDPEFLGLGLGS 860

Query: 623 NETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQ 676
               +L+  +  L         ++      L  G S+LLP   E+   L  LL       
Sbjct: 861 VLLNSLKQTVVALASSAGVLSTVQAAAQAVLQSGWSVLLPTAEERARALSALLPCAVSGN 920

Query: 677 DHPLSNGQRMLLGVITSSL 695
           +  +S G+R ++ ++  SL
Sbjct: 921 EVNISPGRRFMIDLLVGSL 939



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2957 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3016

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3017 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3076 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3134

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3135 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3193

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3194 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3253

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3254 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3311

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3312 RVACGSSHSVAWT 3324



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4051 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGTEVVDVAAGGAHSACVTA 4109

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4110 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 4168

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4169 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4228

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  S+  EVY WG N  GQ G D  +
Sbjct: 4229 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLG-DGTT 4287

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
            N + +P  V  L+   V ++  GS  ++A++     SA
Sbjct: 4288 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASA 4325



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3954 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYG 4013

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4014 AGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4073

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L    V  + AG   S   T 
Sbjct: 4074 HGNRS-PCDRPRVIESLRGTEVVDVAAGGAHSACVTA 4109


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 497 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 556

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 557 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 616

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 617 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 675

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 676 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 733

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 734 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 790

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 791 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 829



 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 607

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 667

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 668 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 726

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 727 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 772


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  198 bits (504), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  198 bits (504), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  198 bits (504), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 182/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S    S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWS---SCXEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  194 bits (492), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 215/424 (50%), Gaps = 25/424 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGC 195
            L+ L  +   ++++  +    S N   + D  ST  L      G    +   +KV+ WG 
Sbjct: 2908 LILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTAGLESTATIRTKVFVWGL 2967

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 2968 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGL 3027

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            G+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + +
Sbjct: 3028 GMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRM 3086

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 3087 NCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 3145

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 3146 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVS 478
               V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL   +IV V+
Sbjct: 3205 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFS 537
            +G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S
Sbjct: 3265 VGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 538  IAYT 541
            +A+T
Sbjct: 3323 VAWT 3326



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4110

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4169

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4170 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4288

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4289 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4335



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S   E
Sbjct: 737 NDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSFAWSSCXE 782



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4004

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4063

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4184 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPTALPGLDTKHIVGIACGPAQSFA--WSSCXE-WSIGLR 788


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 181/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 417 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 476

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 477 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 536

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 537 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 595

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H L L++ +EV++WGSN   QC   
Sbjct: 596 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSND--QCQHF 653

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+   GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 654 DTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 710

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 711 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 749



 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/414 (33%), Positives = 211/414 (50%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2837 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2887

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2888 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 2946

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 2947 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQA 3006

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSA +T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3007 -LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3065

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3066 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3124

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3125 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3184

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3185 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3236



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3962 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4020

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4021 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4079

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4080 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4139

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4140 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4198

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4199 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4245



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 125/226 (55%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 469 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 527

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 528 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 587

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  + LT D  V  WG 
Sbjct: 588 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGS 646

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P    GL S  IV ++ G +   A S  +E
Sbjct: 647 NDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWSSCSE 692



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3858 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3914

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3915 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3973

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3974 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4034 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4094 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4125



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 422 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 481

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 482 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 541

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 542 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 600

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H LVL++D   V S GS +  +  H DT  
Sbjct: 601 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE-VHSWGSND--QCQHFDTLG 657

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+      L    +  +  G + S A  W      W +GLR
Sbjct: 658 VTKPEPTAFPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 698


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 181/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H L L++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+   GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/414 (33%), Positives = 211/414 (50%), Gaps = 32/414 (7%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
            LA DN +   D+ S+ S   +    TP L         +   +KV+ WG N   Q+    
Sbjct: 2927 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2977

Query: 206  RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
              K   P      S  N+  +  G    F +   G     G    G+  LG+++ T+ P+
Sbjct: 2978 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 3036

Query: 259  PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            P+++  L + +V          H   +T +G+V+SWG G+ GKLGH + ++  +P+LI  
Sbjct: 3037 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQA 3096

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
             L  KR+  ++ G SHSA +T  G LYTWG G++GRLGHGD  ++  P +V  L    V 
Sbjct: 3097 -LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3155

Query: 376  AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V ++  G
Sbjct: 3156 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3214

Query: 434  TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++G  H LA++
Sbjct: 3215 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3274

Query: 489  QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 3275 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4110

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4169

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4170 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4288

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4289 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4335



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 125/226 (55%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  + LT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P    GL S  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFAWSSCSE 782



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4004

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4063

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4184 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H LVL++D   V S GS +  +  H DT  
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE-VHSWGSND--QCQHFDTLG 747

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+      L    +  +  G + S A  W      W +GLR
Sbjct: 748 VTKPEPTAFPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pongo abelii]
          Length = 4581

 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3797 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3855

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 3856 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 3914

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3915 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3974

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3975 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4033

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4034 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4080



 Score =  167 bits (422), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 195/382 (51%), Gaps = 41/382 (10%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +KV++WG N   Q+      K   P      S  N+  +  G    F +   G +   G
Sbjct: 2709 RTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2768

Query: 245  KG-----W-LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE-------GEVY 291
            +      W LG+++ T+ P+P        I +LS     +  V + TS+       G+V+
Sbjct: 2769 EATKWPAWGLGISSGTV-PIP-----HGXITALSSYVVKKVAVHSGTSQTGFXPVDGKVF 2822

Query: 292  SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            SWG G+ GKLGH +    R P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++
Sbjct: 2823 SWGEGDDGKLGHFS----RMPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2877

Query: 352  GRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLG- 406
            GRLGHGD  ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S+G G+L K+G 
Sbjct: 2878 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSLGDGDLWKIGP 2936

Query: 407  HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFH 461
              +      P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +   
Sbjct: 2937 GPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 2996

Query: 462  TPVLVTGLSSHQIVDVSI-GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKV 519
             P +V GL   +IV  S  G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V
Sbjct: 2997 KPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLV 3054

Query: 520  VGLEDVCVRQICAGSLFSIAYT 541
             GLE   + ++  GS  S+A+T
Sbjct: 3055 QGLEGQKITRVACGSSHSVAWT 3076



 Score =  137 bits (344), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3693 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3749

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3750 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3808

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3809 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3868

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3869 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 3929 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3960


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  197 bits (502), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333



 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 799

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2951 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3010

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3011 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3070 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3128

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3129 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3187

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3188 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3247

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3248 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3305

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3306 RVACGSSHSVAWT 3318



 Score =  187 bits (475), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3992 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4050

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4051 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4109

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4110 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4169

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4170 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4228

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4229 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4275



 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 13/193 (6%)

Query: 360  KSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            +S  TPTL+  +  V     AV+ G  H L LS +G  V+S G    GKLGH +      
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VYSWGEAEDGKLGHGNRSPCDR 4023

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
            P+VIE+LR   V  V AG + S  +T  G ++ WG G       S S     P LV  L 
Sbjct: 4024 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 4083

Query: 471  SHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
             H++VD++   GD+  L L+  + V++WG    G+ G+   S+    P K+  L  + V 
Sbjct: 4084 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG-SDGCKVPMKIDSLTGLGVV 4142

Query: 529  QICAGSLFSIAYT 541
            ++  GS FS+A T
Sbjct: 4143 KVECGSQFSVALT 4155



 Score = 49.7 bits (117), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 410  TGKVTTPKVIEALRKFRVRKVC--AGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
            T  V+TP ++E+++   ++KV   +G    +AL+ +G V+ WG      LG  + S    
Sbjct: 3964 TESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCD 4022

Query: 462  TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
             P ++  L   ++VDV+ G +H   ++   ++Y WG    G+ G  +  + + +P  V  
Sbjct: 4023 RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEA 4081

Query: 522  LEDVCVRQICAGS 534
            L+   V  I  GS
Sbjct: 4082 LQGHRVVDIACGS 4094


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
           boliviensis]
          Length = 4472

 Score =  197 bits (501), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 222/442 (50%), Gaps = 35/442 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK I    G   GK V  ++ G ++SAA
Sbjct: 195 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAA 254

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 255 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 314

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 315 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 373

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 374 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 431

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 432 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 488

Query: 566 TLIREFLEQYSACFETG-DYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
             +   L Q S   +   D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 489 EQLDLLLRQVSEGMDGSVDWPPPQEKECMAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 548

Query: 620 VLGNETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---- 674
           VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 549 VLLN---SLKQTVVTLASSAGVLGTVQSAAQAVLQSGWSVLLPTAEERARALSALLPCAV 605

Query: 675 -SQDHPLSNGQRMLLGVITSSL 695
              D  +S G+R ++ ++  SL
Sbjct: 606 SGSDVNISPGRRFMIDLLVGSL 627



 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2596 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2655

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LGL++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2656 EATNGRLGLGLSSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2714

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 2715 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2773

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 2774 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 2832

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 2833 VPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 2892

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 2893 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 2950

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 2951 RVACGSSHSVAWT 2963



 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/278 (39%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHG+     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3688 HCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3746

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 3747 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 3805

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3806 SWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3865

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3866 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 3924

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
            N + +P  V  L+   V ++  GS  ++A++     SA
Sbjct: 3925 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSA 3962



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 131/271 (48%), Gaps = 15/271 (5%)

Query: 283  TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
            T T   +V+ WG+ +  +LG G   S+ +       L    V QV+ G     AVT +G 
Sbjct: 2592 TATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK 2650

Query: 343  LYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSM 397
            +Y  GE  +GRLG G    +   P  +T LS       AV  G  H   L+ DG  V+S 
Sbjct: 2651 VYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGK-VFSW 2709

Query: 398  GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---- 453
            G G+ GKLGH        P++IEAL+  R+R +  G+S S ALT  G ++ WGLG     
Sbjct: 2710 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRL 2769

Query: 454  -RSSSISFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                + +   P +V  L  H+++ V+ G  D+  LAL+    V++WG    G+ G+   S
Sbjct: 2770 GHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG-S 2828

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               + P  +  L    V QI  G+ FS+A T
Sbjct: 2829 EGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859



 Score =  110 bits (276), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3584 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3640

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  +PTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3641 DGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3699

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH        P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3700 SWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3759

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3760 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P+K+  L  + V ++  GS FS+A T
Sbjct: 3820 -SDGCKVPTKIDSLTGLGVVKVECGSQFSVALT 3851


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
           [Pan paniscus]
          Length = 4839

 Score =  197 bits (501), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 452 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 511

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 512 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 571

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 572 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 630

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 631 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 688

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 689 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSVTF 745

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + + D+ P   K   A   L LLRL
Sbjct: 746 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 784



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2963 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3022

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 3023 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3082 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3140

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3141 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3199

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3200 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3259

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3260 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3317

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3318 RVACGSSHSVAWT 3330



 Score =  187 bits (475), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 4055 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4113

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4114 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4172

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4173 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4232

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4233 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4291

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4292 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4338



 Score =  137 bits (344), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 504 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 562

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 622

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 623 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 681

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 682 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 727



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3951 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4007

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 4008 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4066

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 4067 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4126

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 4127 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 4187 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4218


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  196 bits (499), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 182/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 549 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 608

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++ +G 
Sbjct: 609 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQ 668

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 669 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 727

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 728 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 785

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 786 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICAMTF 842

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 843 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 881



 Score =  132 bits (333), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 601 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA-GLKGLKVIDVACGSGDAQ 659

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVT++G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 660 TLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 719

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 720 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 778

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 779 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 824


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  196 bits (497), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 194/371 (52%), Gaps = 20/371 (5%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGKG 246
            +VY WG N   Q+      K   P+      +++ I    G    FL+  +G     G+G
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEG 2758

Query: 247  ---WLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                LGL ++     P ++  L   +V          H L +T++G V+SWG G+ GKLG
Sbjct: 2759 SNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLG 2818

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            HG+  S   P+ I   L G RV  V+AG +HSAAVT  G LYTWG G++GRLGHGD  ++
Sbjct: 2819 HGDVTSLDTPRCIE-ALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ 2877

Query: 363  HTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             TP  V  L    V  VSCG  ++ TL L + G  V+S G G+ GKLG   +   ++P +
Sbjct: 2878 LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGG-LVYSWGDGDFGKLGRGGSEGCSSPCL 2936

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQ 473
            ++ L    V  V  G  FSVALT +G V+ WG G        S      P LV GL   +
Sbjct: 2937 VDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKK 2996

Query: 474  IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICA 532
            ++ VS+G  H LA++   +V+AWG N  GQ  Q N S  V+ +P+ V G++ + + ++  
Sbjct: 2997 VIGVSVGALHCLAVTDAGQVFAWGDNDHGQ--QGNGSITVNRRPTLVQGIDGIKITRVAC 3054

Query: 533  GSLFSIAYTVP 543
            GS  S+A+T P
Sbjct: 3055 GSSHSVAWTAP 3065



 Score =  191 bits (484), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 132/376 (35%), Positives = 187/376 (49%), Gaps = 22/376 (5%)

Query: 184  SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLL 241
            +V   ++Y WG N   Q+      K   P +    S +R I+   G+   F + S G   
Sbjct: 3610 AVGGGQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDG--R 3667

Query: 242  VYGKGWLGLANTTIQPLPK-RVP-----LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
            VY  G+       I       VP     L+   V          H L ++SEGEVYSWG 
Sbjct: 3668 VYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGE 3727

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            GE GKLGHGN L   RP++I   L GK V  V+ G +HSAA+T  G LYTWG+G +GRLG
Sbjct: 3728 GEDGKLGHGNKLPCDRPRIIES-LRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLG 3786

Query: 356  HGDLKSRHTPTLVTEL--SDVGAVSC--GESHTLVLS-QDGHTVWSMGSGNLGKLGHEDT 410
            HGD   +  P LV  L    V  V+C  G++ T  ++ ++G TVWS G G+ GKLG   +
Sbjct: 3787 HGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGS 3846

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---LRSSSISFHT--PVL 465
                 P  IE+L    + KV  G+ FSVAL+ +G V+ WG G        +  H   P  
Sbjct: 3847 DGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKK 3906

Query: 466  VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
            V  L   +++ +S G  H +  +   EVY WG N  GQ G D  +  + +P  V  L++ 
Sbjct: 3907 VMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLG-DGTTTGIQKPRLVAALQNK 3965

Query: 526  CVRQICAGSLFSIAYT 541
             + ++  GS  ++A++
Sbjct: 3966 KINRVSCGSAHTVAWS 3981



 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 138/272 (50%), Gaps = 14/272 (5%)

Query: 281  VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
            + +V+    VY WG+ +  +LG       + P+ +   +  + ++ V+ G      VT+ 
Sbjct: 2691 ISSVSGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPIS-VAGGSKSLFLVTQS 2749

Query: 341  GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTVWS 396
            G  Y  GEG +GRLG G  ++ ++P  +T LS       AV  G  H L L+ DG  V+S
Sbjct: 2750 GKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGR-VFS 2808

Query: 397  MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
             G G+ GKLGH D   + TP+ IEAL  FRVR V AG++ S A+T  G ++ WGLG    
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868

Query: 454  --RSSSISFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
                 +++  TP  V  L   ++V VS G  D+  LAL +   VY+WG    G+ G+   
Sbjct: 2869 LGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGG- 2927

Query: 510  SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            S     P  V  L  + V  +  G+ FS+A T
Sbjct: 2928 SEGCSSPCLVDKLSGLGVCHVECGAQFSVALT 2959



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 136/324 (41%), Gaps = 68/324 (20%)

Query: 283  TVTSEGEVYSWGVGEHGKLGH-----------GNTLSQRRPKLIMGG------------- 318
            T    G++Y WG    G+LG               LS  RP  + GG             
Sbjct: 3609 TAVGGGQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRV 3668

Query: 319  ------------------------------LYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
                                          ++ K+V  V++G  H  A++ +G +Y+WGE
Sbjct: 3669 YATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVA-VNSGGKHCLALSSEGEVYSWGE 3727

Query: 349  GDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            G+ G+LGHG+      P ++  L   DV  V+CG +H+  ++  G  +++ G G  G+LG
Sbjct: 3728 GEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGE-LYTWGKGRYGRLG 3786

Query: 407  HEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTWD--GLVFWWGLG-----LRSSS 457
            H D+     PK++EAL  +RV  V  G+  + + A+T +  G V+ WG G      R  S
Sbjct: 3787 HGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGS 3846

Query: 458  ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
                 P  +  LS   I+ V  G    +ALS    VY WG     + G       V +P 
Sbjct: 3847 DGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGH-GVDEHVRRPK 3905

Query: 518  KVVGLEDVCVRQICAGSLFSIAYT 541
            KV+ L+   V  I  G+L  +  T
Sbjct: 3906 KVMTLQGKKVISISTGALHCVVCT 3929


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  195 bits (496), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/339 (37%), Positives = 182/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEV+SWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 744 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q +   +   D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVTEGMDGAADWPPPQEKECMAVATLNLLRL 839



 Score =  193 bits (490), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 198/376 (52%), Gaps = 23/376 (6%)

Query: 184  SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG--- 238
            +   +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G   
Sbjct: 2958 AAVRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3017

Query: 239  --GLLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
              G    G+  LGL++ T+ P+P+++  L + +V          H   +T +G+V+SWG 
Sbjct: 3018 ACGEATNGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 3076

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            G+ GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLG
Sbjct: 3077 GDDGKLGHFSRMNCDKPRLIEA-LRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3135

Query: 356  HGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            HGD  ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   + 
Sbjct: 3136 HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSE 3194

Query: 412  KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLV 466
                P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V
Sbjct: 3195 GCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVV 3254

Query: 467  TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDV 525
             GL   +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE  
Sbjct: 3255 EGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQ 3312

Query: 526  CVRQICAGSLFSIAYT 541
             + ++  GS  S+A+T
Sbjct: 3313 KITRVACGSSHSVAWT 3328



 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHG+     RP+++   L G  V  V+AG +HSA VT 
Sbjct: 4054 HCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES-LRGIEVVDVAAGGAHSACVTA 4112

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 4113 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDD-DTVW 4171

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4172 SWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4231

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4232 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4290

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  PS++    A  P+
Sbjct: 4291 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPSSAGKLPAQVPM 4337



 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L D  V  V CG   ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  P+++E L   +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGS 736

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
                   +  ++   P  + GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3957 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4016

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S   P L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 4017 AGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              + S P D+P  V  L  + V  + AG   S   T 
Sbjct: 4077 HGSRS-PCDRPRVVESLRGIEVVDVAAGGAHSACVTA 4112


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  195 bits (496), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 198/383 (51%), Gaps = 18/383 (4%)

Query: 188  SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYG 244
            +KV+ WG N   Q+  D    K   P      + +  I+   G  C+F++   G +   G
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACG 2983

Query: 245  KG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            +G    LG+       +P ++  L   +V      C+  HVL VT++G+V+SWG G++G+
Sbjct: 2984 EGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGHG+  S  RPK+I      K + +VS G  HSAAV+ +G L+TWG+G  GRLGHGD  
Sbjct: 3044 LGHGSLQSYDRPKMIEI-FQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102

Query: 361  SRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            ++  P LV  L  V    V+CG  +   L+   +++W+ G G+ GKLG +D    T   V
Sbjct: 3103 NQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPV 3162

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQ 473
                    + ++  G  FSV LT +G V+ WG G    L + S S    P LV GL+S  
Sbjct: 3163 QVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKT 3222

Query: 474  IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            I  V++G  H LAL+   EVY+WG N  GQ G +N +    +P  V  L+   + +I  G
Sbjct: 3223 ITQVAVGALHCLALTSSGEVYSWGDNEHGQQG-NNSTICNRKPQIVASLKGHRICKIACG 3281

Query: 534  SLFSIAYTVPPSNSALSSAFTPL 556
            S  SIA+      +A+   F+P+
Sbjct: 3282 SSHSIAFAQGSLTTAVK--FSPI 3302



 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 228/471 (48%), Gaps = 42/471 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H+L +T +G+VYSWG G +G LG GNT SQ  P  +   L G R+  +SAG  HSAAVTE
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAV-AALSGDRIVHISAGSMHSAAVTE 577

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV----SCGESHTLVLSQDGHTVW 395
           DG+LYTWG+G +GRLGHG+ + +  PT+V  L+ V  V      G++HTL L   G  VW
Sbjct: 578 DGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQ-VW 636

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           S G G+ GKLG   + +   PK I  +     V K+  G   S+ALT DG ++ WG G  
Sbjct: 637 SWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDT 696

Query: 453 ---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ--D 507
                 +      P L+ GLS   + DVS+G  H +AL+  ++VYAWG N+  +  +  D
Sbjct: 697 YQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKNSSFEVNESGD 756

Query: 508 NFSNP--VDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
             S+P  ++  S    L   C     + +  S + +  P+   L     P  ++V   TF
Sbjct: 757 IISSPLMIEAASGKGALLIACG---ASETFVSFSKSPTPTGKEL-----PFILNVSTVTF 808

Query: 566 TLIREFLEQYSACFETGDYIPFCSKVTHAQFILLL--LRLLSSHLYLALIGARSSSVLGN 623
             + + L+    C +     P     +  Q  + +  L LL   LY A      S  +G 
Sbjct: 809 EKLDQLLK--IVCDKLDGKGPNTHPPSQEQECMAIAALNLLKLQLYTATSSGIPSESIGL 866

Query: 624 ETA-----ALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD 677
           +       +++H +  L  +    P ++      L  G ++LLP V E+   L  LL   
Sbjct: 867 QPGSTLLQSIKHFVIDLAGESGVIPSVQNAAQSVLRSGWAILLPTVSERASALSGLLPSG 926

Query: 678 ---HPLSNGQRMLLGVITSSLH-----KNEELAHIFYFDQNQDTNILMLED 720
                L  GQ+ ++ ++ +SL      +N  ++ I +  + QDT   +L D
Sbjct: 927 PVTDSLPKGQQFMIHLLVNSLMADHGLENALMSAITFETREQDTISEILSD 977



 Score =  190 bits (482), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/377 (35%), Positives = 195/377 (51%), Gaps = 25/377 (6%)

Query: 190  VYTWGCNLHHQILDEVRG-KCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG-- 244
            V+ WG N H   L  + G K   PRL +SL   N   I  G+   F +   G +   G  
Sbjct: 3836 VFGWGHN-HRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYA 3894

Query: 245  -KGWLGLANT----TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
              G LG+ ++    T  PL        A+  +++    + H L VT++GE+Y+WG GE G
Sbjct: 3895 AHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGK-HCLAVTTQGELYAWGEGEDG 3953

Query: 300  KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            KLG G T++   P LI   L  K V     G SHSA +T+DG LYTWG+G +GRLGH D 
Sbjct: 3954 KLGLGTTVNMNVPHLIES-LKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDH 4012

Query: 360  KSRHTPTLVTELS--DVGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            +++H P LV+ L    V  V+C  G++ TL  +  G  V+S G G+ GKLG         
Sbjct: 4013 ETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASG-CVFSWGDGDYGKLGRGGNEGSKV 4071

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLS 470
            PK I++L    V K+  G+ FS+ALT  G V+ WG G    L     S   TP  V GL 
Sbjct: 4072 PKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLL 4131

Query: 471  SHQ-IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            +H+ ++D+  G  H +  ++  +V++WG N  GQ G D  +  V  P ++   +++C+  
Sbjct: 4132 AHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDT-TQAVSVPKRINITDNICIDH 4190

Query: 530  ICAGSLFSIAYTVPPSN 546
            +  GS  SIA++    N
Sbjct: 4191 VACGSAHSIAWSSKQRN 4207



 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 10/241 (4%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKG 246
           KVY+WG   +  + +     + +   + +L  + I HI AG   +  +   G L  +GKG
Sbjct: 528 KVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKG 587

Query: 247 ---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWGVGEHGKLG 302
               LG  N   + +P  V     +  + V   S +AH L +   G+V+SWG G++GKLG
Sbjct: 588 SYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLG 647

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              +   + PK I G      V ++  G+  S A+T+DG LY+WG GD  +LGHG+ +  
Sbjct: 648 RPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHV 707

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             P L+  LS+  V  VS G  H + L+ D   V++ G  +  ++ +E    +++P +IE
Sbjct: 708 RQPKLIEGLSETVVSDVSVGAQHCVALTTDS-DVYAWGKNSSFEV-NESGDIISSPLMIE 765

Query: 421 A 421
           A
Sbjct: 766 A 766


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  195 bits (496), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 216/418 (51%), Gaps = 25/418 (5%)

Query: 144  VTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGCNLHHQI 201
            V   D+++  +    S N   + + T+T  ++     G    +   +KV+ WG N   Q+
Sbjct: 1722 VRAEDEDLATVPFLASDNEEEEDEKTATGSMSRKRLSGLESAATIRTKVFVWGLNDKDQL 1781

Query: 202  LDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTT 254
                  K   P      S  N+  +  G    F + + G     G    G+  LGL++ T
Sbjct: 1782 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGT 1841

Query: 255  IQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
            I P+P+++  L   +V          H + +T +G+V+SWG G+ GKLGH + ++  +P+
Sbjct: 1842 I-PIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPR 1900

Query: 314  LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-- 371
            LI   L  KR+  ++ G SHSAA+T  G LY+WG G++GRLGHGD  ++  P LV  L  
Sbjct: 1901 LIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLG 1959

Query: 372  SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
              V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    V +
Sbjct: 1960 HRVVQVACGSRDAQTLALTDEG-MVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 2018

Query: 430  VCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
            +  G  FS+ALT  G+V+ WG G        + +    P +V GL   +IV V++G  H 
Sbjct: 2019 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHC 2078

Query: 485  LALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            LA+++  +V+AWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 2079 LAVTETGQVFAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2134



 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGE+YSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITA 2919

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGHGD + +  P LV  L    V  V+C  G++ TL L+ D   VW
Sbjct: 2920 SGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDD-DMVW 2978

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 2979 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3038

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3039 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 3097

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+    A  P+
Sbjct: 3098 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPM 3144



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 2764 TIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 2823

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   E+Y+WG    G+ G
Sbjct: 2824 AGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLG 2883

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L  V V  I AG   S   T 
Sbjct: 2884 HGNRS-PCDRPRVIESLRGVEVVDIAAGGAHSACITA 2919


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  195 bits (495), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/353 (37%), Positives = 183/353 (51%), Gaps = 20/353 (5%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG 246
            KV+ WG N   Q+      K   P      S +R  HI  G    F++   G L   G+G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACGEG 3117

Query: 247  ---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                LGL ++     P+  P L   +V          H L +T++G+VYSWG GE GKLG
Sbjct: 3118 TNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGKLG 3177

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            HGN ++   P+LI   L G+RV  ++ G +HSA VT  G LYTWG G++GRLGHGD   +
Sbjct: 3178 HGNRITLEAPRLIES-LAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQ 3236

Query: 363  HTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              P +V  L++  V  V+CG  ++ TL L+  G  V+S G G+ GKLG   +     P  
Sbjct: 3237 LVPKMVEALANYRVIQVACGSRDAQTLALTACG-KVFSWGDGDFGKLGRGGSDGCAIPMN 3295

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQ 473
            +E L    V +V  G  FS+ALT DG V+ WG G               P LV  L   +
Sbjct: 3296 VERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRR 3355

Query: 474  IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDV 525
            ++ V++G  H LA++  N+V+AWG N  GQ  Q N +  V+ +P+ V G+E V
Sbjct: 3356 VIHVAVGALHCLAVTSENQVWAWGDNDHGQ--QGNGTTCVNRRPALVAGVEGV 3406



 Score =  178 bits (452), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/253 (41%), Positives = 143/253 (56%), Gaps = 12/253 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++++GEVYSWG GE GKLGHGN +S  RPKLI   L G  V  ++ G +HSA +T 
Sbjct: 4049 HCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA-LSGLEVVCIACGGAHSACLTA 4107

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G +YTWG+G +GRLGHGD + +  P LV  LS   V  V+C  G++ TL ++ D + VW
Sbjct: 4108 RGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDN-VW 4166

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I+ L+  RV KV  G+ FSVAL   G V+ WG G   
Sbjct: 4167 SWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYH 4226

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P+ VTG+    IV ++ G  H +A +   EVY WG N  GQ G D  +
Sbjct: 4227 RLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLG-DGTT 4285

Query: 511  NPVDQPSKVVGLE 523
                +P  ++ L+
Sbjct: 4286 LAAQRPRLLMALQ 4298



 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 129/252 (51%), Gaps = 31/252 (12%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L  +S G  +SWG+GE G+LGHG+T ++  P+ +   L    V +V+AG + SA +T 
Sbjct: 536 HYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHH-LAHHEVVRVAAGLACSAVITS 594

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVT-------ELSDVGAVSCGESHTLVLSQDGH 392
            G LYTWG G  GRLGHG +++  TP  V+        + DV A+  GE  TL  + +G 
Sbjct: 595 RGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDV-ALGWGEGSTLCCTWEG- 652

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V   G G  G           TP+ + AL  FRV +V  G  +  ALT  G V+ WG G
Sbjct: 653 AVQVFGEGEAG-----------TPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKG 701

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                   +  S   P LV  L   +IVD+S+G SH +ALS    ++ WG++   Q    
Sbjct: 702 DGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQ---- 757

Query: 508 NFSNPVDQPSKV 519
             SNPV QP K 
Sbjct: 758 -ISNPVPQPVKA 768



 Score = 77.0 bits (188), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 22/178 (12%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPL--PKRVPLEA----AIVSLSVSK 275
            + AG  C+ ++ S G L  +G+G  G L + TI+    P+ V   A     I+ +++  
Sbjct: 581 RVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALG- 639

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             E   L  T EG V  +G GE G            P+  +  L   RVT+V  G    A
Sbjct: 640 WGEGSTLCCTWEGAVQVFGEGEAGT-----------PR-ALSALAMFRVTRVYTGEHWHA 687

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDG 391
           A+T+ G +YTWG+GD  RLGHG+++S   P LV  L  +  V  S G SH + LS +G
Sbjct: 688 ALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEG 745



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 66/154 (42%), Gaps = 13/154 (8%)

Query: 391  GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            G  V+  G  + G+LG  +  KV TP    AL      ++  G     A+T DG V+  G
Sbjct: 3950 GCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATG 4009

Query: 451  LGLRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQ 503
             G           S   P L+  +    I  V+   G  H LALS   EVY+WG    G+
Sbjct: 4010 YGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 504  CGQDNFSNPVDQPSKVV---GLEDVCVRQICAGS 534
             G  N  +  D+P  +    GLE VC+   C G+
Sbjct: 4070 LGHGNRVS-YDRPKLITALSGLEVVCI--ACGGA 4100


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  194 bits (493), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/371 (36%), Positives = 188/371 (50%), Gaps = 22/371 (5%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGK 245
            +KV+ WG N   Q+      K   P      + ++  HI  G    F++   G L   G+
Sbjct: 2985 TKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGE 3044

Query: 246  G-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G      LG +N    P  +   L   ++          H + +T +G+V+SWG GE GK
Sbjct: 3045 GTNGRLGLGHSNNVATPC-QLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGK 3103

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LGH N LS  RPK+I   L  KR+  ++ G SHSAA++  G L+TWG G++GRLGHGD  
Sbjct: 3104 LGHDNRLSLDRPKMIEA-LKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNL 3162

Query: 361  SRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++  P LV  L    +  V+CG  ++ TL LS +G  V+S G G+ GKLG   +     P
Sbjct: 3163 TQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEG-LVFSWGDGDFGKLGRGGSEGCDIP 3221

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSS 471
              IE L    V  +  G  FS+ALT  G V+ WG G        S      P LV  LS 
Sbjct: 3222 HNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSE 3281

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQI 530
             +IV V++G  H L  +   +VYAWG N  GQ  Q N +  V+ +PS V+ LE V V ++
Sbjct: 3282 KKIVHVAVGALHCLCATDQGQVYAWGDNDHGQ--QGNGTILVNRKPSLVLNLEGVRVNRV 3339

Query: 531  CAGSLFSIAYT 541
              GS  SIA+T
Sbjct: 3340 ACGSSHSIAWT 3350



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/301 (38%), Positives = 163/301 (54%), Gaps = 18/301 (5%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++++G+VYSWG G+ GKLGHGN      P+LI   L GK +  ++ G +HSAAVT 
Sbjct: 4066 HCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLI-DALQGKEIVDIACGGAHSAAVTA 4124

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSC--GESHTLVLSQDGHTVW 395
             G +YTWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL ++ D + VW
Sbjct: 4125 GGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDN-VW 4183

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  IE+L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4184 SWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYH 4243

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  +  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D   
Sbjct: 4244 RLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLG-DGTM 4302

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
            N + +P  VV L+   + ++  GS  S+A++   S SA     T L VD  P  + L+R+
Sbjct: 4303 NAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSA-----THLPVDA-PMEYDLVRD 4356

Query: 571  F 571
             
Sbjct: 4357 I 4357



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 224/442 (50%), Gaps = 28/442 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++ +G+VYSWG G+ G+LGHG+  S+ +P  I   L GK V  +S G ++SAAVT 
Sbjct: 532 HSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITE-LVGKNVIHISCGATYSAAVTS 590

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G +YTWG G++GRLGHG  +    PTLV  L D  +  ++C  G++ TL ++  G  V+
Sbjct: 591 SGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTG-LVF 649

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR- 454
           S G G  GKLG   +    TPK+IE L+   V +V  G+ FS+ALT  G V+ WG G   
Sbjct: 650 SWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNH 709

Query: 455 ----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                S      P LV GL+   I  V++G  HVLAL+   EVY WG N  GQ G+ + +
Sbjct: 710 RLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSET 769

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
           N V +P+ +  L+   +  I  G   SIA++   SN+   +      VD+   TF  + +
Sbjct: 770 N-VSEPTLLTLLQGKNIVDIDCGPNQSIAWS--SSNTYSINLRVAFVVDICEETFCCLNQ 826

Query: 571 FLEQYS-ACFETGDYIPFCSKVTHAQFILLLLR-----LLSSHLYLALIGARSSSVLGNE 624
            L   S     + D+ P   K       L LLR     L+S ++    +G    S L   
Sbjct: 827 LLMVVSEGVCRSHDWPPPQDKECMTVACLNLLRLQLYALISHNIDPKCVGLNPGSSL--- 883

Query: 625 TAALRHVLFKLVDME-TSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL----SQDHP 679
             +LR  +  L         I++     L +G S+LLP   E+   L +LL    +    
Sbjct: 884 LTSLRQQIMNLASKNGVVITIQSAAQAALQVGWSILLPTADERSKTLSSLLPSVGTDPSN 943

Query: 680 LSNGQRMLLGVITSSLHKNEEL 701
           +S+GQR +  ++ S+L  +E L
Sbjct: 944 VSSGQRFMTDLLVSTLMADEGL 965



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 141/332 (42%), Gaps = 66/332 (19%)

Query: 271  LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-----------HGNTLSQRRPKLIMGG- 318
            L +++  E   LT    G +Y WG    G+LG               LS  RP  ++GG 
Sbjct: 3951 LWLNRKPEDWTLTWGGSGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGE 4010

Query: 319  ------------------------------------------LYGKRVTQVSAGHSHSAA 336
                                                      ++ K+V  V++G  H  A
Sbjct: 4011 QTLLAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVA-VNSGGKHCLA 4069

Query: 337  VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTV 394
            ++ DG +Y+WGEGD G+LGHG+      P L+  L   ++  ++CG +H+  ++  G  +
Sbjct: 4070 LSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGE-I 4128

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLG 452
            ++ G G  G+LGH D+     PK++E L  F+V  +  G+  + ++ +T D  V+ WG G
Sbjct: 4129 YTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDG 4188

Query: 453  -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                  R  S     P+ +  L+   +V V  G    +AL++   VY WG     + G  
Sbjct: 4189 DYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4248

Query: 508  NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +    V  P K+  L+   +  I  GSL  +A
Sbjct: 4249 S-DEHVRHPKKIAALQGKKIICIATGSLHCVA 4279



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 8/226 (3%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKR-VPLEAAIVSLSVSK 275
           N+ HI  G   +  + S+G +  +G+   G LG   +    +P   V L+   +      
Sbjct: 574 NVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACG 633

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             +A  L VT+ G V+SWG G +GKLG G +   + PKLI   L    V +V  G   S 
Sbjct: 634 SGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIE-KLQDIEVARVYCGSQFSL 692

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           A+T+ G +YTWG+GD+ RLGHG       P LV  L+   +  V+ G  H L L+ DG  
Sbjct: 693 ALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGE- 751

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           V+  G  + G++G      V+ P ++  L+   +  +  G + S+A
Sbjct: 752 VYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA 797



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%)

Query: 370  ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
            E+ +V  +S   SH+ + S     V+  G  +  +LG     KV  P   E+L   +   
Sbjct: 2963 EIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIH 3022

Query: 430  VCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI--GD 481
            +  G+     +++DG ++  G      LGL  S+ +  TP  +T L+ + I  V++  G 
Sbjct: 3023 IAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSN-NVATPCQLTSLNQYVIKKVAVHSGG 3081

Query: 482  SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             H +AL+   +V++WG    G+ G DN  + +D+P  +  L+   +R I  GS  S A +
Sbjct: 3082 KHAMALTLDGKVFSWGEGEDGKLGHDNRLS-LDRPKMIEALKSKRIRDIACGSSHSAAIS 3140



 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 9/169 (5%)

Query: 381  ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            E  TL     G T++  G  + G+LG  +  KV  P   EAL   R  ++  G    +A+
Sbjct: 3958 EDWTLTWGGSG-TIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAV 4016

Query: 441  TWDGLVF-----WWGLGLRSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEV 493
            T DG V+       G      + +  TP L+  +    I  V++  G  H LALS   +V
Sbjct: 4017 TSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKV 4076

Query: 494  YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            Y+WG    G+ G  N  N  D P  +  L+   +  I  G   S A T 
Sbjct: 4077 YSWGEGDDGKLGHGN-KNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA 4124


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  194 bits (493), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 215/424 (50%), Gaps = 25/424 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA--HSKVYTWGC 195
            L+ L  +   D+++  +    S N   D +  +T  L         S A   +KV+ WG 
Sbjct: 2659 LIILGRIRAEDEDLAAVPFLASDNEEEDDEKANTGSLIRKKASGLESAATIRTKVFVWGL 2718

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWL 248
            N   Q+      K   P      S  N+  +  G    F +   G     G    G+  L
Sbjct: 2719 NDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 2778

Query: 249  GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            G+++ T+ P+P+++  L   +V          H + +T +G+++SWG G+ GKLGH + +
Sbjct: 2779 GISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRM 2837

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +
Sbjct: 2838 NCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKM 2896

Query: 368  VTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L 
Sbjct: 2897 VKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2955

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVS 478
               V ++  G  FS+ALT  G+V+ WG G        + +    P +V GL   +IV V+
Sbjct: 2956 GQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3015

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFS 537
            +G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S
Sbjct: 3016 VGALHCLAVTDTGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3073

Query: 538  IAYT 541
            +A+T
Sbjct: 3074 VAWT 3077



 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 162/303 (53%), Gaps = 20/303 (6%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  ++AG +HSA +T 
Sbjct: 3804 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITA 3862

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGHGD + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 3863 AGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDD-DTVW 3921

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3922 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3981

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3982 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4040

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            N + +P  V  L+   + ++  GS  ++A+ T  P+N+       P+        +  ++
Sbjct: 4041 NAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPANAGKLPTQVPM-------EYNHLQ 4093

Query: 570  EFL 572
            EFL
Sbjct: 4094 EFL 4096



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G+V+SWG G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQVYSWG 467

Query: 348 EGDHGRLGHGDLKSRHTPTLVTEL 371
           +GD+ RLGHG  +    P L+  L
Sbjct: 468 KGDNQRLGHGTEEHVRYPKLLEGL 491



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 140/374 (37%), Gaps = 84/374 (22%)

Query: 365 PTLVTELSDVG--AVSCGESHTLVLSQDGHT-----------------------VWSMGS 399
           P     L+++G   ++C E   L+LS++G                         VWS G 
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGD 416

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LR 454
           G+ GKLG   +    TPK+IE L+   V KV  G+ FSVALT DG V+ WG G       
Sbjct: 417 GDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGH 476

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
            +      P L+ GL +               L Q N            C        +D
Sbjct: 477 GTEEHVRYPKLLEGLQA--------------TLPQAN------------CLSKKXXXXLD 510

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTFTLIREFLE 573
               +VG        I  G   S A++   S S  S     P  VDV P TF  +   L 
Sbjct: 511 T-KHIVG--------IACGPAQSFAWS---SCSEWSIGLRVPFVVDVCPMTFEQLDLLLR 558

Query: 574 QYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALI-----GARSSSVLGNETAA 627
           Q S   + T D+ P   K   A   L LLRL    L+ A+            +      +
Sbjct: 559 QVSEGMDGTSDWPPPQEKECMAVATLNLLRL---QLHAAISHQVDPECLGLGLGSVLLNS 615

Query: 628 LRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQDHPLS 681
           L+  +  L  +      +++     L  G S+LLP   E+   L  LL       D  +S
Sbjct: 616 LKQTVVTLASNAGVLNTVQSAAQAVLQSGWSVLLPTAEERARALSALLPSAVSGNDMNVS 675

Query: 682 NGQRMLLGVITSSL 695
            G+R ++ ++  SL
Sbjct: 676 PGRRFMIDLLVGSL 689



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMG 398
           G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG  V+S G
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ-VYSWG 467

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALR 423
            G+  +LGH     V  PK++E L+
Sbjct: 468 KGDNQRLGHGTEEHVRYPKLLEGLQ 492



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3707 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGYG 3766

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  TP L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 3767 AGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3826

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              N S P D+P  +  L  + V  I AG   S   T 
Sbjct: 3827 HGNRS-PCDRPRVIESLRGIEVVDIAAGGAHSACITA 3862



 Score = 45.1 bits (105), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 27/43 (62%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           +C     + +T +G+VYSWG G++ +LGHG     R PKL+ G
Sbjct: 448 RCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 490


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  194 bits (492), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 180/339 (53%), Gaps = 21/339 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++  L ++ +G 
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQ 626

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FSVALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG 685

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+  L   +++DV+ G +H LAL++ +EV++WG+N   QC   
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNND--QCQHF 743

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +PS + GL+   +  I  G   S A++   S S  S     P  VDV   TF
Sbjct: 744 DTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWS---SCSEWSVGLRVPFVVDVCSGTF 800

Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
             +   L Q S   + T D+ P   K   A   L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECVAVATLNLLRL 839



 Score =  184 bits (466), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 185/338 (54%), Gaps = 21/338 (6%)

Query: 220  NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSV 273
            N+  +  G    F +   G     G    G+  LG+++ T+ P+P++V  L + +V    
Sbjct: 2697 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV-PIPRQVTALSSYVVKKVA 2755

Query: 274  SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
                  H   +T +G+V+SWG G+ GKLGH + ++  +P+LI   L  KR+  ++ G SH
Sbjct: 2756 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSH 2814

Query: 334  SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQ 389
            SAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V  V+CG  ++ TL L+ 
Sbjct: 2815 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874

Query: 390  DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            +G  V+S G G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G+V+ W
Sbjct: 2875 EG-LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 2933

Query: 450  GLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
            G G        S +    P +V GL   +IV V++G  H LA++   +VYAWG N  GQ 
Sbjct: 2934 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ- 2992

Query: 505  GQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
             Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 2993 -QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3029



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/282 (36%), Positives = 145/282 (51%), Gaps = 11/282 (3%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP+++   L G  V  ++AG +HSA VT 
Sbjct: 3729 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES-LRGTEVVDIAAGGAHSACVTS 3787

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 3788 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 3846

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            S G G+ GKLG   +     P  ++     RV +          L   G   +  LG   
Sbjct: 3847 SWGDGDYGKLGRGGSDGCKVP--MKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLG-HG 3903

Query: 456  SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
            S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +N + +
Sbjct: 3904 SDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLG-DGTTNAIQR 3962

Query: 516  PSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 3963 PRLVAALQGRKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4004



 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 128/226 (56%), Gaps = 11/226 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
             AVT++G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 618 PLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 677

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++EAL+  +V  V AG++  +ALT D  V  WG 
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736

Query: 452 GLRSSSI-SFHT----PVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
             +     + H     P L+ GL +  IV ++ G +   A S  +E
Sbjct: 737 NDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWSSCSE 782



 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 8/156 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3632 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 3691

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S   P L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 3692 AGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3751

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              N S P D+P  V  L    V  I AG   S   T
Sbjct: 3752 HGNRS-PCDRPRVVESLRGTEVVDIAAGGAHSACVT 3786


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  193 bits (491), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 157/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +++EGEVYSWG GE GKLGHGN     RP+ I   L GK V  ++AG +HSA +T 
Sbjct: 4034 HCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES-LRGKEVVDIAAGGAHSACITS 4092

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LY+WG+G +GRLGHGD + +  P LV  L    V  V+C  G++ TL ++ D  +VW
Sbjct: 4093 TGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDD-DSVW 4151

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I+AL+   V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4152 SWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYH 4211

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 +      P   T L   +IV ++ G  H +A +   EVY WG N  GQ G D  +
Sbjct: 4212 RLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLG-DGTT 4270

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   + ++  GS  S+A+ T  P N+    A  P+
Sbjct: 4271 NAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPVNAGKLPAQIPM 4317



 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 185/678 (27%), Positives = 311/678 (45%), Gaps = 88/678 (12%)

Query: 279  AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            +H L +TSEG+VYSWG G+ GKLGHG+T++   P LI   L+GK V  V+ G  HSAA+T
Sbjct: 488  SHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLI-NELHGKSVVNVACGSHHSAAIT 546

Query: 339  EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTV 394
              G L+TWG G  GRLG G  +   TP LV+ L  V    V+C  G++ T+ L+  G +V
Sbjct: 547  ASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTG-SV 605

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL- 453
            +S G G  GKLG   +     PK+++ L+   V +V  G  +S A+  +G VF WG G  
Sbjct: 606  YSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEG 665

Query: 454  ----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
                  +      P  V  L+   +  +S+G  H LA ++  E+ +WG N  GQ G+ + 
Sbjct: 666  YKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGH- 724

Query: 510  SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            +    +P+    L   C+  I   S  + A++  PS   +     P  VDV   TF  + 
Sbjct: 725  TGLKAEPAFAASLLGKCIIGITCSSAQTFAWS-RPSRGTMIPMRIPFVVDVCRVTFEQLD 783

Query: 570  EFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLG--NETA 626
              L +     + + D+ P   K   A   +  LRLL+  +Y A+    S + +G    +A
Sbjct: 784  ALLGEVCEGLDGSNDWPPPQEKECMA---VAALRLLNLQMYAAICQGESPASIGLLPGSA 840

Query: 627  ALRHVLFKLVDMETSP----EIETLLTDCLAIGASLLLPPVVEQLDLLKTLL-----SQD 677
             +  +  +LV + ++      ++      L  G +LLLP   E+   L  LL        
Sbjct: 841  LVDSLKQRLVALASNAGVLVTVQKAAQSVLLNGWALLLPTAEERAKALSNLLPSGCGRDS 900

Query: 678  HPLSNGQRMLLGVITSSLHKNEELAHIFYFDQNQDTNIL-----------MLEDLLKISC 726
              LS+GQR +  ++ SSL  +  L         ++T I+           + ED L++S 
Sbjct: 901  GVLSSGQRFMTDLLVSSLMADGGLESALEVAFRKETQIIEETKSREEVPAIDEDSLQLSI 960

Query: 727  ----------RKSYAYT---LTHFQSNACKVSPQETP-----VSQVVTLL---QSLIITQ 765
                      R + ++T   L H   ++C  +  E+       S  + LL   Q L++ +
Sbjct: 961  PLLELVQQLLRNASSHTLQQLQHLAKDSCLKTDDESQRQMQGTSTSLDLLLRFQRLLVAK 1020

Query: 766  YV---VKHSEICEE----------VYQHYLDIVFPHVIDILERSIAWVN-QGKDIEVLNE 811
             +    K  +I  +          + + Y  ++  H+ D+L  + +  +   K    + +
Sbjct: 1021 MLPTGKKQPQISADAESETLGMASLLKKYTFLLCSHMADVLPLATSLASYSSKHFSAVAQ 1080

Query: 812  LLYNSLAGKILFSI-VHSLLINIHRSMYPTLRY-------FLAILPLLDSLNQLLP-MQG 862
            ++   ++G +L  + V  +L+ +H    P++ +        ++++  LDS NQL P +  
Sbjct: 1081 IVKQDISGVLLPEVSVGLVLLQLH---APSVIHASQCSPQLVSLMESLDSFNQLAPGLHR 1137

Query: 863  NYTETNSF--LWLIDMER 878
              TE  ++  +W   MER
Sbjct: 1138 EDTEDLAWPGVWAGCMER 1155



 Score =  182 bits (461), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/408 (33%), Positives = 204/408 (50%), Gaps = 31/408 (7%)

Query: 173  KLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFC 230
            K+    G  DI    ++V+ WG N   Q+      K   P +    S ++   I  G   
Sbjct: 2902 KVKCGSGVKDI---QTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSKS 2958

Query: 231  TFLLDSTGGLLVYGK---GWLGLANTTIQ-PLPKRV-PLEAAIVSLSVSKCSEAHVLTVT 285
             F +   G L   G+   G LGL  +    P P+++  L   ++          H + +T
Sbjct: 2959 LFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALT 3018

Query: 286  SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
             +G+V+SWG G+ GKLGH + ++  +P+LI   L  KRV  ++ G SHSAA+  +G LYT
Sbjct: 3019 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LRSKRVRDIACGGSHSAAIISNGDLYT 3077

Query: 346  WGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGN 401
            WG G++GRLGHGD  ++  P LV  L    V  V+ G  ++ TL L+  G TV+S G G+
Sbjct: 3078 WGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSG-TVYSWGDGD 3136

Query: 402  LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSS 456
             GKLG   +   + P  IE L    V ++  G  FS+ALT  G V+ WG G        +
Sbjct: 3137 FGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3196

Query: 457  SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-Q 515
                  P LV  L   ++  V++G  H L++    +VYAWG N  GQ  Q N +  V+ +
Sbjct: 3197 DAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQ--QGNSTTTVNRK 3254

Query: 516  PSKVVGLEDVCVRQICAGSLFSIAY-----TVPPSNSAL--SSAFTPL 556
            P+ V GLE   + ++  GS  SIA+     +VP S+  +  SSA  PL
Sbjct: 3255 PALVQGLEGCKISRVACGSSHSIAWCTLDSSVPASHEPVLFSSARDPL 3302



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 24/349 (6%)

Query: 131 DLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDIS-----V 185
           D+I+ AC    +L+ L    +  + +     S  +I + +  ++      ++ S      
Sbjct: 435 DIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALT 494

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +   VY+WG     ++       C  P L  +    ++ ++  G   +  + ++G L  +
Sbjct: 495 SEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTW 554

Query: 244 GKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWGVGEHG 299
           G+G    LGL +T     P  V     +  + V+  S +A  + +   G VYSWG GE+G
Sbjct: 555 GRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYG 614

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           KLG G +   + PKL+   L G  VT+V  G  +SAAV ++G ++TWG G+  +LGHG  
Sbjct: 615 KLGRGGSEGCKAPKLV-DKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTE 673

Query: 360 KSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
           +    P  V  L+   V ++S G  H L  +++G  + S G  + G+LG   TG    P 
Sbjct: 674 EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELL-SWGRNDKGQLGEGHTGLKAEPA 732

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLV 466
              +L    + K   G + S A T     F W    R + I    P +V
Sbjct: 733 FAASL----LGKCIIGITCSSAQT-----FAWSRPSRGTMIPMRIPFVV 772


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/345 (37%), Positives = 183/345 (53%), Gaps = 33/345 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+  +LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 542

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 543 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 602

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 603 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 661

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 662 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 719

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF---TPLCV----D 559
           D       +P+ + GL+   +  I  G         P  +SA SS +     LCV    D
Sbjct: 720 DTLRVTKPEPAALPGLDTKHIVGIACG---------PAQSSAGSSXYEWSMGLCVPQGGD 770

Query: 560 VRPHTFTLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
           +R  T   +   L Q S   E + D+ P   K   A   L LLRL
Sbjct: 771 IRSTTSEQLDLLLRQVSEGMEGSADWPPPQEKECVAVATLNLLRL 815



 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2710 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2769

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2770 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 2829 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2887

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 2888 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 2946

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 2947 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3006

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3007 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3064

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3065 RVACGSSHSVAWT 3077



 Score =  187 bits (475), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3802 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3860

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 3861 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 3919

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3920 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3979

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3980 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4038

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 4039 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4085



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 27/289 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 593

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 653

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 654 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 712

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC-- 504
                   +  ++   P  + GL +  IV ++ G +   A S     Y W   +MG C  
Sbjct: 713 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSSAGSS---XYEW---SMGLCVP 766

Query: 505 -GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSA 552
            G D  S   +Q        D+ +RQ+  G   S  +  P     ++ A
Sbjct: 767 QGGDIRSTTSEQ-------LDLLLRQVSEGMEGSADWPPPQEKECVAVA 808



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3698 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLLAVTA 3754

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3755 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3813

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3814 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3874 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3933

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 3934 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3965



 Score =  104 bits (259), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 124/245 (50%), Gaps = 16/245 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 488 AATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 547

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 548 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 607

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 608 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 666

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 667 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 723

Query: 413 VTTPK 417
           VT P+
Sbjct: 724 VTKPE 728


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2247 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2306

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2307 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 2366 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2424

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 2425 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 2483

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 2484 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 2543

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 2544 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 2601

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 2602 RVACGSSHSVAWT 2614



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3339 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3397

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 3398 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 3456

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3457 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3516

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3517 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 3575

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 3576 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 3622



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3235 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3291

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3292 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3350

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3351 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3411 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 3471 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3502


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2183 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2242

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2243 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 2302 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2360

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 2361 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 2419

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 2420 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 2479

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 2480 RGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 2537

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 2538 RVACGSSHSVAWT 2550



 Score =  180 bits (456), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/287 (39%), Positives = 155/287 (54%), Gaps = 14/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3277 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3335

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 3336 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDD-DTVW 3394

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3395 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3454

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++ +  Y WG N  GQ G D  +
Sbjct: 3455 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE-DGSYTWGDNDEGQLG-DGTT 3512

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 3513 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 3559



 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3173 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTLFAVTA 3229

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3230 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3288

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3289 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3348

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VDV+   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3349 RLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 3409 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3440


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2654 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2713

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2714 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 2773 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2831

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 2832 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 2890

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 2891 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 2950

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 2951 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3008

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3009 RVACGSSHSVAWT 3021



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3746 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 3804

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 3805 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 3863

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 3864 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 3923

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3924 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 3982

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 3983 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4029



 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 169/361 (46%), Gaps = 49/361 (13%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 461 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 520

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+C  G++ TL ++++  
Sbjct: 521 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENET 580

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           T        L  L     G +    V+E+ R  ++   C           + L F++G  
Sbjct: 581 T-------RLSVLWRSVLGILCVSGVVESFRYNQLGVGCRCRQRGWEPPQEDLKFFYGVL 633

Query: 451 ---LGLRSSSISFH--------TPV----------LVTGLSS----HQIVDVSIGDSHVL 485
              + LR   I F         TPV          +  G SS     +++DV+ G +H L
Sbjct: 634 TRDVMLREGQIVFEAGRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKKVIDVAAGSTHCL 693

Query: 486 ALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP 544
           AL++ +EV++WGSN   QC   D       +P+ + GL+   +  I  G   S A++   
Sbjct: 694 ALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDAKHIMGITCGPAQSCAWS--- 748

Query: 545 SNSALSSAF-TPLCVDVRPHTFTLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLR 602
           S S  S     P   D+   TF  +   L Q S   + + D+ P   K   A   L LLR
Sbjct: 749 SCSEWSIGLRVPFGADICSMTFEQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLR 808

Query: 603 L 603
           L
Sbjct: 809 L 809



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 3642 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 3698

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 3699 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 3757

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 3758 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3817

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 3818 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 3878 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3909



 Score = 53.9 bits (128), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 3/67 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 513 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 571

Query: 334 SAAVTED 340
           + AVTE+
Sbjct: 572 TLAVTEN 578


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  191 bits (484), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187  HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
             +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 2898 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 2957

Query: 240  LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 2958 EATNGRLGLGISSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 3017 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3075

Query: 359  LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 3076 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3134

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
             P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 3135 VPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3194

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
               +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 3195 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3252

Query: 529  QICAGSLFSIAYT 541
            ++  GS  S+A+T
Sbjct: 3253 RVACGSSHSVAWT 3265



 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/278 (39%), Positives = 151/278 (54%), Gaps = 12/278 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHG+     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 3990 HCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES-LRGVEVVDVAAGGAHSACVTA 4048

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 4049 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4107

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 4108 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4167

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 4168 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4226

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
            N + +P  V  L+   V ++  GS  ++A++     SA
Sbjct: 4227 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPTSA 4264



 Score =  181 bits (460), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 151/468 (32%), Positives = 226/468 (48%), Gaps = 40/468 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 437 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 496

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++ RL HG         +++ L     +  SCG   + TL   ++G 
Sbjct: 497 ITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQ 556

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 557 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 615

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 616 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 673

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
           D       +P+ + GL+   +  I  G   S A++   S S  S     P  VD+   TF
Sbjct: 674 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 730

Query: 566 TLIREFLEQYSACFETG-DYIPFCSKVTHAQFILLLLRL-----LSSHLYLALIGARSSS 619
             +   L Q S   +   D+ P   K   A   L LLRL     +S  +    +G    S
Sbjct: 731 EQLDLLLRQVSEGMDGSVDWPPPQEKECMAVATLNLLRLQLHAAISHQVDPEFLGLGLGS 790

Query: 620 VLGNETAALRHVLFKLVDMETS-PEIETLLTDCLAIGASLLLPPVVEQLDLLKTLL---- 674
           VL N   +L+  +  L         +++     L  G S+LLP   E+   L  LL    
Sbjct: 791 VLLN---SLKQTVVTLASSAGVLGTVQSAAQAVLQSGWSVLLPTAEERARALSALLPCAV 847

Query: 675 -SQDHPLSNGQRMLLGVITSSLHKNEELAHIFYFDQNQDTNILMLEDL 721
              D  +S G+R ++ ++  SL  +  L    +      T++  L+D+
Sbjct: 848 SGNDVNISPGRRFMIDLLVGSLMADGGLESALHA-----TSVYELQDI 890



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 129/284 (45%), Gaps = 21/284 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S      ++ HI  G   +  + + G
Sbjct: 442 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 501

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            L  +G+G    L    + +  +   +  L+             A  L     G+V+SWG
Sbjct: 502 ELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWG 561

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 562 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 620

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 621 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 677

Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           VT P+   +  L    +  +  G + S A  W      W +GLR
Sbjct: 678 VTKPEPAALPGLDTKHIVGIACGPAQSFA--WSSCSE-WSIGLR 718



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 8/157 (5%)

Query: 393  TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            T++  G  + G+LG  +  KV  P   EAL   R  ++  G     A+T DG ++  G G
Sbjct: 3893 TIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 3952

Query: 453  LRSSSI-----SFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCG 505
                       S  +P L+  +    I  V++  G  H LALS   EVY+WG    G+ G
Sbjct: 3953 AGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4012

Query: 506  QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              + S P D+P  +  L  V V  + AG   S   T 
Sbjct: 4013 HGSRS-PCDRPRVIESLRGVEVVDVAAGGAHSACVTA 4048


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  189 bits (481), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
            +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 551 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 610

Query: 240 LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
               G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 611 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 670 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 728

Query: 359 LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 729 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 787

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
            P+ IE L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL
Sbjct: 788 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 847

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
              +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + 
Sbjct: 848 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 905

Query: 529 QICAGSLFSIAYT 541
           ++  GS  S+A+T
Sbjct: 906 RVACGSSHSVAWT 918



 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 1643 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 1701

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 1702 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 1760

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 1761 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 1820

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 1821 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 1879

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 1880 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 1926



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 1539 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 1595

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 1596 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 1654

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 1655 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1714

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 1715 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 1775 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 1806


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 211/423 (49%), Gaps = 23/423 (5%)

Query: 138  LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN--IGDTDISVAHSKVYTWGC 195
            LV L  V   D++   +    S N   + +  S   L      G    +   +KV+ WG 
Sbjct: 1742 LVLLGRVRAEDEDWAAVPFLASDNEEEEDEKASGGSLIRKKAAGLESAATIRTKVFVWGL 1801

Query: 196  NLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGL 250
            N   Q+      K   P      S  N   +  G    F +   G +   G+   G LGL
Sbjct: 1802 NDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL 1861

Query: 251  A-NTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
              ++   P+P++V  L + +V          H   +T++G+V+SWG G+ GKLGH +  +
Sbjct: 1862 GVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXN 1921

Query: 309  QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
              +P+LI   L  +R+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V
Sbjct: 1922 CDKPRLIEA-LKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV 1980

Query: 369  TELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
              L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L  
Sbjct: 1981 KVLVGHRVVQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNG 2039

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSI 479
              V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL   +IV V++
Sbjct: 2040 QGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAV 2099

Query: 480  GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSI 538
            G  H LA++   +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+
Sbjct: 2100 GALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSV 2157

Query: 539  AYT 541
            A+T
Sbjct: 2158 AWT 2160



 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 2886 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 2944

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L++D  TVW
Sbjct: 2945 AGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTED-DTVW 3003

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  ++AL      KV  G+ FSVALT  G V+ WG G   
Sbjct: 3004 SWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYH 3063

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 3064 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 3122

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 3123 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 3169



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G VY WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 2782 LSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAAL---RPAQLIGGEQTLFAVTA 2838

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 2839 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 2897

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 2898 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYG 2957

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VDV+   GD+  L L++ + V++WG    G+ G+  
Sbjct: 2958 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGG 3017

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P KV  L  +   ++  GS FS+A T
Sbjct: 3018 -SDGCKVPMKVDALTGLGAVKVECGSQFSVALT 3049


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/296 (38%), Positives = 164/296 (55%), Gaps = 16/296 (5%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +T + EVYSWG G+ G+LGHG+T ++  P LI   L GK +  V  G ++SAA++ 
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISA 584

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE--SHTLVLSQDGHTVW 395
           +G LYTWG G++GRLGHG  +   TPT+++ LSD  +  V+CG   +HTL ++  G  V+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK-VY 643

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
           S G G+ GKLG   +     P++IE L+  ++ +V  G  FSVAL+ DG V+ WG G   
Sbjct: 644 SWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGW 703

Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNF 509
                +  +   P +V  L   ++V VS+G SHVLAL+   EVY WG N   Q C  D+ 
Sbjct: 704 KLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC--DSS 761

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
              V QP  +  L+   V  +C G   S A+T    N        P  +D+   TF
Sbjct: 762 ELFVQQPRLIEALKGQKVVGVCCGPAQSFAWT--DDNERTPKTAVPFVIDLGEQTF 815



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 130/269 (48%), Gaps = 22/269 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +VY+WG     ++          P L Q+L   +I  +E G   +  + + G L  +G+G
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRG 594

Query: 247 WLG----------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             G          L  T I  L     ++ A  S        AH L +TS+G+VYSWG G
Sbjct: 595 NYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFY------AHTLCITSQGKVYSWGDG 648

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           ++GKLG G +   + P+LI   L   ++ QV  G   S A++EDG +YTWG+G+  +LGH
Sbjct: 649 DYGKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGH 707

Query: 357 GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
              ++   P +V  L D  V  VS G SH L L+  G  V+  G     ++       V 
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGE-VYGWGKNENKQICDSSELFVQ 766

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            P++IEAL+  +V  VC G + S A T D
Sbjct: 767 QPRLIEALKGQKVVGVCCGPAQSFAWTDD 795



 Score = 40.8 bits (94), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIV 475
           P+  + L +  ++++C      + LT  G VF         S     P  +T L   +++
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF-----FMYYSSDTQCPQEMTALDDKEVI 516

Query: 476 DVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            ++      H LAL++  EVY+WG+   G+ G  + S   ++P+ +  L+   +  +  G
Sbjct: 517 KIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECG 575

Query: 534 SLFSIAYTVPPSNSAL 549
             +S A +   +N AL
Sbjct: 576 GTYSAAIS---ANGAL 588


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/303 (37%), Positives = 165/303 (54%), Gaps = 13/303 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + ++SEG VYSWG G+ GKLGHGN +S  RPKLI   L G  +  ++ G  HSAA+T 
Sbjct: 25  HCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED-LLGVEIVDIACGGHHSAAITS 83

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGHGD   +  P +V  L D  V  V+C  G++ TL ++ D   VW
Sbjct: 84  AGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDD-DNVW 142

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 143 SWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH 202

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                +      P  V  L   +I+ ++ G  H +A S   EV+ WG N  GQ G D  +
Sbjct: 203 RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG-DGTT 261

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVD-VRPHTFTLIR 569
           + + +P  V  L+   + ++  GS  ++A++   +  +   A TP+  D V+  +++++R
Sbjct: 262 SALHRPRLVHALQGKKITRVACGSAHTLAWSTAKATQSRMPASTPMEYDLVKDLSYSVLR 321

Query: 570 EFL 572
             L
Sbjct: 322 NRL 324



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 22/278 (7%)

Query: 226 AGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAH 280
            G+ C   L S G +  +G+G    LG  N      PK +   L   IV ++   C   H
Sbjct: 22  GGKHC-IALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIA---CGGHH 77

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVT 338
              +TS G +Y+WG G +G+LGHG++  Q RPK++   L   +V  V+  +G + +  VT
Sbjct: 78  SAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVE-ALQDYKVIDVACGSGDAQTLCVT 136

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGHTVWS 396
           +D  +++WG+GD+G+LG G       P  +  L+ +G V   CG   ++ L++ G  V++
Sbjct: 137 DDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSG-AVYT 195

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            G G+  +LGH     V  P+ + AL+  ++  +  G+   VA +  G VF WG      
Sbjct: 196 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 255

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
           LG  ++S + H P LV  L   +I  V+ G +H LA S
Sbjct: 256 LGDGTTS-ALHRPRLVHALQGKKITRVACGSAHTLAWS 292



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 11/222 (4%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHT 384
           VS+G  H  A++ +G +Y+WGEGD G+LGHG+  S   P L+ +L  V  V  +CG  H+
Sbjct: 19  VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 78

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTW 442
             ++  G  +++ G G  G+LGH D+     PKV+EAL+ ++V  V  G+  + ++ +T 
Sbjct: 79  AAITSAG-WLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTD 137

Query: 443 DGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           D  V+ WG G      R  S     P+ +  L+   +V V  G    +AL++   VY WG
Sbjct: 138 DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWG 197

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                + G     + V +P KV  L+   +  I  GSL  +A
Sbjct: 198 KGDYHRLGHGT-DDHVRRPRKVAALQGKKIISIATGSLHCVA 238


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  187 bits (474), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/338 (36%), Positives = 185/338 (54%), Gaps = 21/338 (6%)

Query: 220  NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSV 273
            N+  +  G    F +   G     G    G+  LGL++ T+ PLP++V  L + +V    
Sbjct: 1298 NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTV-PLPRQVTALSSYVVKKVA 1356

Query: 274  SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
                  H   +T +G+V+SWG G+ GKLGH + ++  +P+LI   L  KR+  ++ G SH
Sbjct: 1357 VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSH 1415

Query: 334  SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQ 389
            SAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V  V+CG  ++ TL L+ 
Sbjct: 1416 SAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTD 1475

Query: 390  DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            +G  V+S G G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G+V+ W
Sbjct: 1476 EG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 1534

Query: 450  GLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
            G G        S +    P +V GL   +IV V++G  H LA++   +VYAWG N  GQ 
Sbjct: 1535 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ- 1593

Query: 505  GQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
             Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 1594 -QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1630



 Score =  182 bits (462), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 155/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHG+     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 2358 HCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 2416

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 2417 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDD-DTVW 2475

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V +V  G+ FSVALT  G V+ WG G   
Sbjct: 2476 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYH 2535

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   + + ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 2536 RLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 2594

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 2595 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 2641



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 129/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 2254 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAAL---RPVQLIGGEQTLFAVTA 2310

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 2311 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 2369

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH        P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 2370 SWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 2429

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++V ++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 2430 RLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2489

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 2490 -SDGCKVPMKIDSLTGLGVVRVECGSQFSVALT 2521


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  186 bits (473), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 299 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 357

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGH D + +  P LV  L    V  V+C  G++ TL L+ D  TVW
Sbjct: 358 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDD-DTVW 416

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 417 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 476

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 477 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 535

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
           N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 536 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 582



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 132/274 (48%), Gaps = 18/274 (6%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT
Sbjct: 194 ILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVT 250

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTV 394
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V
Sbjct: 251 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-V 309

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL- 453
           +S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G  
Sbjct: 310 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 369

Query: 454 ----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                S S     P LV  L  H++VDV+   GD+  L L+  + V++WG    G+ G+ 
Sbjct: 370 GRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 429

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 430 G-SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 462


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  186 bits (473), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 110/271 (40%), Positives = 149/271 (54%), Gaps = 12/271 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 118 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 176

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 177 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 235

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 236 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 295

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 296 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 354

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N + +P  V  L+   V ++  GS  ++A++
Sbjct: 355 NAIQRPRLVAALQGKKVNRVACGSAHTLAWS 385



 Score =  114 bits (285), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 95/273 (34%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 282 LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           L     G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 14  LYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 70

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
           DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 71  DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 129

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
           S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 130 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 189

Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
               S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 190 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            S+    P K+  L  + V ++  GS FS+A T
Sbjct: 250 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 281


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  186 bits (471), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/301 (36%), Positives = 161/301 (53%), Gaps = 15/301 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +++EGEVYSWG G+ GKLGHGN  S  RP++I   L GK V  V+ G +HSA +T 
Sbjct: 679 HCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIES-LRGKEVVDVACGGAHSACITA 737

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGHGD   +  P  V  LS   V  V+C  G++ TL ++ D   VW
Sbjct: 738 SGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDD-DCVW 796

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P  ++ L+   V +V  G+ FSVALT  G V+ WG G   
Sbjct: 797 SWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYH 856

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                +      P  V  L   +++ +++G  H +A +   EVY WG N  GQ G D   
Sbjct: 857 RLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLG-DGTV 915

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
           N + +P  V  L+   + ++  GS  ++A++    ++A +    P  V   P  + L+R+
Sbjct: 916 NAIHKPRLVAALQGKKINRVSCGSAHTVAWSTCNPSTAGACGRMPPAV---PLEYDLLRD 972

Query: 571 F 571
            
Sbjct: 973 I 973



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 65/157 (41%), Gaps = 8/157 (5%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           T+   G  + G+LG  +  KV  P   EAL   R  +V  G     A+T DG V+  G G
Sbjct: 582 TILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYG 641

Query: 453 LRSSSISFHT-----PVLVTGLSSHQI--VDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                    T     P L+  L    I  V V+ G  H LALS   EVY+WG    G+ G
Sbjct: 642 AGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLG 701

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             N S+  ++P  +  L    V  +  G   S   T 
Sbjct: 702 HGNKSS-CERPRVIESLRGKEVVDVACGGAHSACITA 737


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  186 bits (471), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 321 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 379

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 380 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 438

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 439 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 498

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 499 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 557

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
           N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 558 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 604



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282 LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 217 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 273

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
           DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 274 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 332

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
           S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 333 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 392

Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
               S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 393 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 452

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            S+    P K+  L  + V ++  GS FS+A T
Sbjct: 453 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 484


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 855  HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 913

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 914  AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 972

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 973  SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 1032

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 1033 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 1091

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 1092 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 1138



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 103/174 (59%), Gaps = 9/174 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG--HSH 333
           C  +H   +TS GE+Y+WG+GE+G+LGHG+  +Q +PK++   L G RV QV+ G   + 
Sbjct: 22  CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQ 80

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDG 391
           + A+T++GL+++WG+GD G+LG G  +  + P  +  L+  G   + CG   +L L++ G
Sbjct: 81  TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 140

Query: 392 ----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                 V++ G  + G+ G+  T     P +++ L   ++ +V  G+S SVA T
Sbjct: 141 VVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 751  LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 807

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 808  DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 866

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 867  SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 926

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H++VD++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 927  RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 987  -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 1018



 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 16/190 (8%)

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  P +V  
Sbjct: 5   KPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV 63

Query: 371 L--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE L    
Sbjct: 64  LLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 122

Query: 427 VRKVCAGTSFSVALTWDGLVFWW----------GLGLRSSSISFHTPVLVTGLSSHQIVD 476
           V ++  G  FS+ALT  G+V+ W          G     ++     P LV GL   +I  
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 477 VSIGDSHVLA 486
           V+ G SH +A
Sbjct: 183 VACGSSHSVA 192



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 16/178 (8%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT-- 434
           ++CG SH+  L+  G  +++ G G  G+LGH D      PK+++ L   RV +V  G+  
Sbjct: 20  IACGSSHSAALTSSGE-LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRD 78

Query: 435 SFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           + ++ALT +GLVF WG G      R  S   + P  +  L+   +  +  G    LAL++
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 138

Query: 490 YN-----EVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
                  +VYAWG N  GQ  Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 139 SGVVWTWQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194



 Score = 68.2 bits (165), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 8/133 (6%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           P++IEAL+  R+R +  G+S S ALT  G ++ WGLG         + +   P +V  L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 471 SHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
            H+++ V+ G  D+  LAL+    V++WG    G+ G+   S   + P  +  L    V 
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVC 124

Query: 529 QICAGSLFSIAYT 541
           QI  G+ FS+A T
Sbjct: 125 QIECGAQFSLALT 137



 Score = 51.2 bits (121), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 6/69 (8%)

Query: 275 KCSEAHVLTVTSEGEV-----YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
           +C     L +T  G V     Y+WG  +HG+ G+G T   R+P L+  GL G+++T+V+ 
Sbjct: 127 ECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQ-GLEGQKITRVAC 185

Query: 330 GHSHSAAVT 338
           G SHS A T
Sbjct: 186 GSSHSVAWT 194


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++SEGEVYSWG  E GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 399 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 457

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
            G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 458 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 516

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 517 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 576

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 577 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 635

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
           N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 636 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 682



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282 LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 295 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 351

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
           DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 352 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 410

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
           S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 411 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 470

Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
               S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 471 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            S+    P K+  L  + V ++  GS FS+A T
Sbjct: 531 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 562


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L ++SEGEV+SWG  E GKLGHGN  S  RP++I   L GK V  ++AG +HSA +T 
Sbjct: 400 HCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES-LRGKEVVDIAAGGAHSACITS 458

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
            G L+TWG+G +GRLGHGD + +  P LV  L  V    V+C  G++ TL ++ D  +VW
Sbjct: 459 TGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDD-DSVW 517

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           S G G+ GKLG   +     P+ +EAL    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 518 SWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYH 577

Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                S      P  V  L    ++ ++ G  H +A +   EV+ WG N  GQ G D  +
Sbjct: 578 RLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDEGQLG-DGST 636

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
           + + +P  V  L+   + ++  GS  S+A+ T  P N+       P+
Sbjct: 637 SAIPRPRLVAALQGKKINRVACGSAHSLAWSTSKPVNAGKLPVQVPM 683


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  184 bits (466), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L ++SEGEVYSWG  + GKLGHGN     RP++I   L G  V  V+AG +HSA VT 
Sbjct: 1087 HCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 1145

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
             G LYTWG+G +GRLGH D + +  P LV  L    V  ++C  G++ TL L+ D  TVW
Sbjct: 1146 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 1204

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            S G G+ GKLG   +     P  I++L    V KV  G+ FSVALT  G V+ WG G   
Sbjct: 1205 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 1264

Query: 453  --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 S      P  V GL   +++ ++ G  H +  ++  EVY WG N  GQ G D  +
Sbjct: 1265 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 1323

Query: 511  NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 1324 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 1370



 Score =  182 bits (463), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/338 (35%), Positives = 185/338 (54%), Gaps = 21/338 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSV 273
           N+  +  G    F +   G     G    G+  LG+++ T+ P+P+++  L + +V    
Sbjct: 29  NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PIPRQITALSSYVVKKVA 87

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
                 H   +T +G+V+SWG G+ GKLGH + ++  +P+LI   L  KR+  ++ G SH
Sbjct: 88  VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSH 146

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQ 389
           SAA+T  G LYTWG G++GRLGHGD  ++  P +V  L    V  V+CG  ++ TL L+ 
Sbjct: 147 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 206

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           +G  V+S G G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G+V+ W
Sbjct: 207 EG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 265

Query: 450 GLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
           G G        S +    P +V GL   +IV V++G  H LA++   +VYAWG N  GQ 
Sbjct: 266 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ- 324

Query: 505 GQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            Q N +  V+ +P+ V GLE   + ++  GS  S+A+T
Sbjct: 325 -QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)

Query: 282  LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            L+    G +Y WG    G+LG   G  +    P   +  L   R  Q+  G     AVT 
Sbjct: 983  LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 1039

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
            DG LY  G G  GRLG G  +S  TPTL+  +  V     AV+ G  H L LS +G  V+
Sbjct: 1040 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 1098

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
            S G    GKLGH +      P+VIE+LR   V  V AG + S  +T  G ++ WG G   
Sbjct: 1099 SWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158

Query: 454  ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                S S     P LV  L  H+++D++   GD+  L L+  + V++WG    G+ G+  
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             S+    P K+  L  + V ++  GS FS+A T
Sbjct: 1219 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 1250


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  183 bits (465), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 188/373 (50%), Gaps = 27/373 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP----RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +KV+ WG N   Q+      K   P     LQ L   +  +  G    F +   G +   
Sbjct: 430 AKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL--KVTQVIGGSKSLFAVTMGGKVYAC 487

Query: 244 GK---GWLGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G+   G LGL   T  +  L  +V     I  L+V      H + +T +G VYSWG GE 
Sbjct: 488 GESTSGRLGLGPVTGSVSRL-TQVLFPQPIKKLAVHSGGR-HAMALTYDGHVYSWGDGEE 545

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLGHG+      P+ I      K +  +S G SHSAA+   G LYTWG G +GRLGHG+
Sbjct: 546 GKLGHGSRADALTPRKIET-FPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGN 604

Query: 359 LKSRHTPTLVTELS--DVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             +   P  V  LS   V  V+CG  ++ TL L+QDG  V+S G G+ GKLG   +    
Sbjct: 605 NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDG-LVYSWGDGDFGKLGRGGSDGCC 663

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
            PK +E L    V K+  G  FS+AL+  GLV+ WG G        S      P +V GL
Sbjct: 664 VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGL 723

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
             H++VDV++G  H LA+++  +V+AWG N  GQ  Q N    V+ +P KV GLE V + 
Sbjct: 724 REHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ--QGNGGTTVNRKPMKVQGLEGVKIT 781

Query: 529 QICAGSLFSIAYT 541
           ++  GS  SIA+ 
Sbjct: 782 KLACGSSHSIAFA 794



 Score =  176 bits (447), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 184/378 (48%), Gaps = 22/378 (5%)

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLV 242
            V    ++ WG N   Q+      K   P      + ++ I+   G+   F +   G +  
Sbjct: 1404 VGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFA 1463

Query: 243  YG---KGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             G    G LG+ +     +P  +       I  +SV+   + H+L +++EGEVYSWG G 
Sbjct: 1464 TGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGK-HILALSNEGEVYSWGEGV 1522

Query: 298  HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
             GKLGHGN  S   P++I   L G  + +V+ G SHSAA+   G LYTWG+G +GRLGH 
Sbjct: 1523 DGKLGHGNRSSLDHPRIIES-LRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHE 1581

Query: 358  DLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQ---DGHTVWSMGSGNLGKLGHEDT 410
            D + +  P LV  L D  V  V+C  G++ TL +++       VWS G G+ GKLG   +
Sbjct: 1582 DSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGS 1641

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVL 465
                 P +I+ L    +  V  G+ FS+AL+  G V+ WG G        S      P L
Sbjct: 1642 DGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKL 1701

Query: 466  VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
            +  L   ++V+VS+G  H +A     +VY WG N  GQ G D  +     P  V  L+  
Sbjct: 1702 IESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG-DGTTQATQIPRLVAALQGH 1760

Query: 526  CVRQICAGSLFSIAYTVP 543
             +  +  GS  ++A+++P
Sbjct: 1761 HISHVSCGSAHTVAWSLP 1778



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 18/282 (6%)

Query: 273  VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            ++K  +   L+    G ++ WG    G+LG G   ++ +  +    L   +  Q+  G  
Sbjct: 1392 INKRPDDWTLSWVGSGSIFGWGHNHRGQLG-GPEGAKVKIPIPCPSLAALKPIQLVGGEQ 1450

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
                VT +G ++  G G  GRLG G  +S   PTL+  +  V     +V+ G  H L LS
Sbjct: 1451 TLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALS 1510

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             +G  V+S G G  GKLGH +   +  P++IE+LR   + KV  G S S A+   G ++ 
Sbjct: 1511 NEGE-VYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYT 1569

Query: 449  WGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQ----YNEVYAWG 497
            WG G         S     P LV  L  + +VDV+   GD+  L +++     + V++WG
Sbjct: 1570 WGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWG 1629

Query: 498  SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                G+ G+   S+    P+ +  L    +  +  GS FS+A
Sbjct: 1630 DGDYGKLGRGG-SDGCKVPAIIDTLMGKHITHVACGSQFSLA 1670


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  183 bits (465), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 188/373 (50%), Gaps = 27/373 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP----RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +KV+ WG N   Q+      K   P     LQ L   +  +  G    F +   G +   
Sbjct: 429 AKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL--KVTQVIGGSKSLFAVTMGGKVYAC 486

Query: 244 GK---GWLGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G+   G LGL   T  +  L  +V     I  L+V      H + +T +G VYSWG GE 
Sbjct: 487 GESTSGRLGLGPVTGSVSRL-TQVLFPQPIKKLAVHSGGR-HAMALTYDGHVYSWGDGEE 544

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLGHG+      P+ I      K +  +S G SHSAA+   G LYTWG G +GRLGHG+
Sbjct: 545 GKLGHGSRADALTPRKIET-FPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGN 603

Query: 359 LKSRHTPTLVTELS--DVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             +   P  V  LS   V  V+CG  ++ TL L+QDG  V+S G G+ GKLG   +    
Sbjct: 604 NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDG-LVYSWGDGDFGKLGRGGSDGCC 662

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
            PK +E L    V K+  G  FS+AL+  GLV+ WG G        S      P +V GL
Sbjct: 663 VPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGL 722

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
             H++VDV++G  H LA+++  +V+AWG N  GQ  Q N    V+ +P KV GLE V + 
Sbjct: 723 REHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ--QGNGGTTVNRKPMKVQGLEGVKIT 780

Query: 529 QICAGSLFSIAYT 541
           ++  GS  SIA+ 
Sbjct: 781 KLACGSSHSIAFA 793



 Score =  176 bits (447), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 184/378 (48%), Gaps = 22/378 (5%)

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLV 242
            V    ++ WG N   Q+      K   P      + ++ I+   G+   F +   G +  
Sbjct: 1403 VGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFA 1462

Query: 243  YG---KGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             G    G LG+ +     +P  +       I  +SV+   + H+L +++EGEVYSWG G 
Sbjct: 1463 TGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGK-HILALSNEGEVYSWGEGV 1521

Query: 298  HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
             GKLGHGN  S   P++I   L G  + +V+ G SHSAA+   G LYTWG+G +GRLGH 
Sbjct: 1522 DGKLGHGNRSSLDHPRIIES-LRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHE 1580

Query: 358  DLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQ---DGHTVWSMGSGNLGKLGHEDT 410
            D + +  P LV  L D  V  V+C  G++ TL +++       VWS G G+ GKLG   +
Sbjct: 1581 DSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGS 1640

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVL 465
                 P +I+ L    +  V  G+ FS+AL+  G V+ WG G        S      P L
Sbjct: 1641 DGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKL 1700

Query: 466  VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
            +  L   ++V+VS+G  H +A     +VY WG N  GQ G D  +     P  V  L+  
Sbjct: 1701 IESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG-DGTTQATQIPRLVAALQGH 1759

Query: 526  CVRQICAGSLFSIAYTVP 543
             +  +  GS  ++A+++P
Sbjct: 1760 HISHVSCGSAHTVAWSLP 1777



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 18/282 (6%)

Query: 273  VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            ++K  +   L+    G ++ WG    G+LG G   ++ +  +    L   +  Q+  G  
Sbjct: 1391 INKRPDDWTLSWVGSGSIFGWGHNHRGQLG-GPEGAKVKIPIPCPSLAALKPIQLVGGEQ 1449

Query: 333  HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
                VT +G ++  G G  GRLG G  +S   PTL+  +  V     +V+ G  H L LS
Sbjct: 1450 TLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALS 1509

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             +G  V+S G G  GKLGH +   +  P++IE+LR   + KV  G S S A+   G ++ 
Sbjct: 1510 NEGE-VYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYT 1568

Query: 449  WGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQ----YNEVYAWG 497
            WG G         S     P LV  L  + +VDV+   GD+  L +++     + V++WG
Sbjct: 1569 WGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWG 1628

Query: 498  SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                G+ G+   S+    P+ +  L    +  +  GS FS+A
Sbjct: 1629 DGDYGKLGRGG-SDGCKVPAIIDTLMGKHITHVACGSQFSLA 1669


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  183 bits (465), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/267 (40%), Positives = 154/267 (57%), Gaps = 16/267 (5%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
           H L + + GEVYSWG G+ G+LGHG+T+    PK+I    G   GK V  ++ G ++SAA
Sbjct: 703 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 762

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
           +T +G LYTWG G++GRLGHG  +    P LV  L  +    V+CG  ++ TL ++++G 
Sbjct: 763 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 822

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VWS G G+ GKLG   +    TPK+IE L+   V KV  G+ FS+ALT DG V+ WG G
Sbjct: 823 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 881

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
                   +      P L+ GL   +++DV+ G +H LAL++ +EV++WGSN   QC   
Sbjct: 882 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 939

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAG 533
           D       +PS + GL+   +  I  G
Sbjct: 940 DTLRVTKPEPSALPGLDTKHIVGIACG 966



 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 11/217 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
           C   +   +T+EGE+Y+WG G +G+LGHG++  +  P L+  GL G +V  V+  +G + 
Sbjct: 755 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVA-GLKGLKVIDVACGSGDAQ 813

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           + AVTE+G +++WG+GD+G+LG G      TP L+ +L   DV  V CG   ++ L++DG
Sbjct: 814 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 873

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+S G G+  +LGH     V  PK++E L+  +V  V AG++  +ALT D  V  WG 
Sbjct: 874 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 932

Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
                   +  ++   P  + GL +  IV ++ G + 
Sbjct: 933 NDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQ 969



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 123/245 (50%), Gaps = 16/245 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN------IRHIEAGQFCTFLLDSTG 238
            A  +VY+WGC    ++          P++ S  S       + HI  G   +  + + G
Sbjct: 708 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 767

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
            L  +G+   G LG  ++  + +P  V     +  + V+  S +A  L VT  G+V+SWG
Sbjct: 768 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 827

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G++GKLG G +   + PKLI   L    V +V  G   S A+T+DG +Y+WG+GD+ RL
Sbjct: 828 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRL 886

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG  +    P L+  L    V  V+ G +H L L++D   V S GS +  +  H DT +
Sbjct: 887 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 943

Query: 413 VTTPK 417
           VT P+
Sbjct: 944 VTKPE 948



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 13/170 (7%)

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK----VCAGTSFSV 438
           H L L+  G  V+S G G+ G+LGH DT  +  PKVI A    +  K    +  G+++S 
Sbjct: 703 HYLALAATGE-VYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSA 761

Query: 439 ALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYN 491
           A+T +G ++ WG G        SS     P+LV GL   +++DV+ G  D+  LA+++  
Sbjct: 762 AITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 821

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +V++WG    G+ G+   S+    P  +  L+D+ V ++  GS FSIA T
Sbjct: 822 QVWSWGDGDYGKLGRGG-SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 870


>gi|156321155|ref|XP_001618219.1| hypothetical protein NEMVEDRAFT_v1g155285 [Nematostella vectensis]
 gi|156198056|gb|EDO26119.1| predicted protein [Nematostella vectensis]
          Length = 215

 Score =  174 bits (440), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 5/205 (2%)

Query: 446 VFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           V+ WG    LG  S   +  TP L+  L SH +VD+S+GDSH +AL+Q N VYAWG+N+M
Sbjct: 7   VYVWGCGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSM 66

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVR 561
           GQCGQ + + P+ +P KV+GL+ V V QI AG+  ++A+T  P +  + S +   CVD++
Sbjct: 67  GQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWTALPMDRQVVSWYRAYCVDLK 126

Query: 562 PHTFTLIREFLEQYSACFETGDYI-PFCSKVTHAQFILLLLRLLSSHLYLALIGARSSSV 620
             TF  ++ FLE+Y    ++     PF SK  H +F+LL LRLLS HL LA+    SS+V
Sbjct: 127 ESTFGCLKAFLERYCIGLDSDQPTPPFASKSEHHKFVLLCLRLLSVHLSLAVSAGASSNV 186

Query: 621 LGNETAALRHVLFKLVDMETSPEIE 645
           LG  T +LR +LF L+D   S EI+
Sbjct: 187 LGVHTTSLRKLLFGLLDASVSEEIQ 211



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 7/101 (6%)

Query: 289 EVYSWGVGEHGKLGHGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +VY WG G    LG G+   +   PKL++  L    V  +S G SH  A+T+D  +Y WG
Sbjct: 6   QVYVWGCGP--SLGTGSVDATSATPKLLLA-LQSHSVVDISVGDSHCVALTQDNNVYAWG 62

Query: 348 EGDHGRLGHGDLKSRHT-PTLVTELSDVGA--VSCGESHTL 385
               G+ G G   +  T P  V  L  V    +S G SHT+
Sbjct: 63  NNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 103



 Score = 47.4 bits (111), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +Y WG G     G  D  S  TP L+  L    V  +S G+SH + L+QD + V++ G+ 
Sbjct: 7   VYVWGCGPSLGTGSVDATSA-TPKLLLALQSHSVVDISVGDSHCVALTQD-NNVYAWGNN 64

Query: 401 NLGKLGHED-TGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           ++G+ G    T  +T PK +  L    V ++ AGTS +VA T
Sbjct: 65  SMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWT 106



 Score = 43.9 bits (102), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN-TLSQRRPKLIMGGLYGKRVT 325
           ++V +SV    ++H + +T +  VY+WG    G+ G G+ T    +PK ++ GL G  V 
Sbjct: 38  SVVDISVG---DSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVL-GLDGVAVH 93

Query: 326 QVSAGHSHSAAVT 338
           Q+SAG SH+ A T
Sbjct: 94  QISAGTSHTVAWT 106


>gi|26331500|dbj|BAC29480.1| unnamed protein product [Mus musculus]
          Length = 244

 Score =  172 bits (435), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/219 (43%), Positives = 132/219 (60%), Gaps = 24/219 (10%)

Query: 1523 MDAQTLSFGKNGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLC 1582
            M+A+T+SFGKNGEEP LAF+D+D +A LYP V+FYS+N  GEKVKI DM +  TPRDLL 
Sbjct: 1    MEARTISFGKNGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLP 58

Query: 1583 GEPYCAPVPILMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFV 1642
            G+P C+PV  ++ E+ I L+R LH+ DRW   +N+ +++RL  IK     + +    +  
Sbjct: 59   GDPICSPVAAVLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRS 118

Query: 1643 PQADK---------------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMG 1681
             Q+ +                     G   L E Q+  LC EVWP L V+GG D GLR+G
Sbjct: 119  VQSREENEMREEKENKEEEKGKHNRHGLADLSEPQLRTLCIEVWPVLAVIGGVDAGLRVG 178

Query: 1682 GKCVEKPSGRVGTLLGTLKEGIAKVKDLNFDEIDLPRDY 1720
            G+CV K +GR  TLLG +KEG    K + +DE ++   Y
Sbjct: 179  GRCVHKQTGRHATLLGVVKEGSTSAK-VQWDEAEITIRY 216


>gi|390348017|ref|XP_003726917.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Strongylocentrotus
            purpuratus]
          Length = 1514

 Score =  168 bits (426), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 223/477 (46%), Gaps = 57/477 (11%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG---GLYGKRVTQVSAGHSHSAA 336
            H L +T++ EVY+WG GE G+LG GNT ++  P L+ G      G+ V Q+S G S+SAA
Sbjct: 789  HYLALTADWEVYAWGNGEGGRLGLGNTSAREDPTLVQGLPSQSTGQHVIQISCGSSYSAA 848

Query: 337  VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-------------------VGAV 377
            +T +G +YTWG G +GRLGHG+   + TP LV+   D                    G  
Sbjct: 849  LTSNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPKLVSNSDDQLTPKLVSGLK 908

Query: 378  SCGESHTLVLSQDGHT--------VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
                 H  + S DG T        ++S G+G+ GKLG   +     PK+++ L+     K
Sbjct: 909  EQKFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVK 968

Query: 430  VCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
             C G  FSV LT  G V+ WG G        S      P ++  L   +IVD+     H 
Sbjct: 969  ACCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCHT 1028

Query: 485  LALSQYNEVYAWGSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +A+++  E + WG N  GQ   G+    +   +P+ +  +E    +++C G    +A T 
Sbjct: 1029 VAIAESGEFFCWGRNDQGQLGLGEAALKSNKGEPTLIECMEG---KKLC-GLACGVAQTF 1084

Query: 543  PPSNSALSSA--FTPLCVDVRPHTFTLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILL 599
              ++SA  S     P  VDV   TF  +   L++     E +GD+ P   K       L 
Sbjct: 1085 AWTSSAHWSVGLHVPFSVDVTRTTFEKLDLLLQRVCEGIEGSGDWPPPQEKECMVVAALN 1144

Query: 600  LLRLLSSHLYLALIGARSSSV--LGNETAALRHVLFKLVDMETSPEIETLLTDC----LA 653
            LLRL    L++A+  ++      LG ++  L ++  ++V++ +   I T + +     L 
Sbjct: 1145 LLRL---QLHVAISQSQDHERLGLGPKSPLLSNLKQRIVELASKAGIITTVQNAAQATLQ 1201

Query: 654  IGASLLLPPVVEQLDLLKTLL----SQDHPLSNGQRMLLGVITSSLHKNEELAHIFY 706
             G S+LLP   E+   L  LL    ++   ++ G+R ++ ++  SL  +  L    +
Sbjct: 1202 TGWSMLLPTAEERAKALSALLPSGGTETISMTPGRRFMMDLLVGSLMADGGLESALH 1258



 Score = 45.4 bits (106), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  VW  G       G   T    +P ++E+L +F V ++       + LT    V+   
Sbjct: 702 GQEVWGWGLLPFKTTGSNPT--CASPCMLESLSEFGVVQMACSERCLIVLTRTSKVYLQY 759

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
               +    FH   LV GLS+  ++ ++      H LAL+   EVYAWG+   G+ G  N
Sbjct: 760 F--NNEPPGFH---LVDGLSNKDVIQIAAHPEGKHYLALTADWEVYAWGNGEGGRLGLGN 814

Query: 509 FSNPVDQPSKVVGLEDVC----VRQICAGSLFSIAYT 541
            S   D P+ V GL        V QI  GS +S A T
Sbjct: 815 TSARED-PTLVQGLPSQSTGQHVIQISCGSSYSAALT 850


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  167 bits (423), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 211/390 (54%), Gaps = 29/390 (7%)

Query: 190 VYTWGCNLHHQIL-DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW- 247
           V+++G  ++ ++   +   + +  +++ L S+I+ I AG   +  L  +G +  +G G  
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGL-SDIQAIAAGTNHSLALTKSGDVYSFGFGLF 107

Query: 248 --LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
             LG  NT  Q  PK++   + I +++     + H L +T  G+VYS+G G  G LGHGN
Sbjct: 108 GRLGHGNTDSQLEPKKIEGLSDIQAIA---AGDFHSLALTKSGDVYSFGNGTSG-LGHGN 163

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T  Q  PK I        V  ++AG +HS A+T+ G +Y++G G  GRLGHGD  S+  P
Sbjct: 164 TEDQSTPKKIESL---SDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEP 220

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             + +LSD+ A++ G +H+L L++ G  V+S G G  G+LGH DT    TPK IE L   
Sbjct: 221 KKIEDLSDIQAIAAGGNHSLALTKSGD-VYSFGWGLHGQLGHGDTENQLTPKKIEDLSD- 278

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIG 480
            ++ V AG + S+ALT  G V+ +G G         +    TP  + GL   Q +  + G
Sbjct: 279 -IQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKDIQAI--AAG 335

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           D H LAL++  +VY++G+ T G  G  + +N + +P K+ GL D  ++ I AG+  S+A 
Sbjct: 336 DFHSLALTKSGDVYSFGNGTSG-LGHGDTANQL-EPKKIEGLTD--IQAIAAGANHSLAL 391

Query: 541 TVPPSNSALS---SAFTPLCVDVRPHTFTL 567
            V   +S +    ++F    ++ R  T T+
Sbjct: 392 AVEEQDSTIDPDEASFDKNILNQRDITVTM 421



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 17/156 (10%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +V+S G G  GKLGH DT     PK IE L    ++ + AGT+ S+ALT  G V+ +G G
Sbjct: 48  SVFSFGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFG 105

Query: 453 L-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
           L       ++ S   P  + GLS  Q   ++ GD H LAL++  +VY++G+ T G     
Sbjct: 106 LFGRLGHGNTDSQLEPKKIEGLSDIQA--IAAGDFHSLALTKSGDVYSFGNGTSGL---- 159

Query: 508 NFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYT 541
              N  DQ  P K+  L D  V+ I AG   S+A T
Sbjct: 160 GHGNTEDQSTPKKIESLSD--VQAIAAGGNHSLALT 193


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  167 bits (422), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 176/354 (49%), Gaps = 35/354 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG--- 244
           V++WG     ++          P++ +L S  N  HI  GQ  TF++D  G L   G   
Sbjct: 1   VFSWGNTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSHT 60

Query: 245 ------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                 K +LG A +++        +E       +   + +HVL VT +GEVYSWG   +
Sbjct: 61  RPQNDVKSFLGHAESSL------ALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSY 114

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            +LG        RP  I   L G+ V QV AG  HSAAV++ G LYTWG G +GRLGHG 
Sbjct: 115 KQLGRDGV--NNRPMKITA-LEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGT 171

Query: 359 LKSRHTPTLVTELSD---VGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
               + PT V    +   V  V+C  G++H++ +++DGH ++S G G+ GKLGH    + 
Sbjct: 172 SDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGH-IYSFGDGDFGKLGHGTNDRR 230

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTG 468
             P+ I+    F + KV  G+S S A++  G ++ WG G R      +      P     
Sbjct: 231 RQPERID----FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHA 286

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           L++H++VD ++   H +A++   EV+ WG+N  GQ G D  S       +V+ L
Sbjct: 287 LNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAGSEKTIIAPRVIKL 340



 Score = 84.3 bits (207), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 21/251 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +VY+WG N + Q+  +  G  +RP ++ +L    +  + AG   +  +   G L  +G
Sbjct: 103 QGEVYSWGSNSYKQLGRD--GVNNRPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWG 160

Query: 245 KGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKC--SEAHVLTVTSEGEVYSWGVGEHG 299
           +G    LG   +    +P RV      + +    C   +AH + VT +G +YS+G G+ G
Sbjct: 161 RGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFG 220

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           KLGHG    +R+P+ I        + +V  G S SAA++  G LY WG G   RLG G  
Sbjct: 221 KLGHGTNDRRRQPERI-----DFDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTE 275

Query: 360 KSRHTPTLVTELSDVGAVSCGES--HTLVLSQDGHTVWSMGSGNLGKLGHEDTGK---VT 414
                P     L+    V C  S  H + ++  G  V+  G+ + G+LG  D G    + 
Sbjct: 276 AVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGE-VFVWGANDHGQLG-ADAGSEKTII 333

Query: 415 TPKVIEALRKF 425
            P+VI+   +F
Sbjct: 334 APRVIKLPGEF 344



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 21/158 (13%)

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V+S G+    +LG+     V +P++   L +     +  G   +  +  +G ++  G   
Sbjct: 1   VFSWGNTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSHT 60

Query: 451 ---------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
                    LG   SS++     LV GL S + + VS   SHVLA++   EVY+WGSN+ 
Sbjct: 61  RPQNDVKSFLGHAESSLA-----LVEGLESERFIQVS-ATSHVLAVTLQGEVYSWGSNSY 114

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            Q G+D  +N   +P K+  LE   V Q+CAG   S A
Sbjct: 115 KQLGRDGVNN---RPMKITALEGEEVVQVCAGGHHSAA 149


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  163 bits (412), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 158/313 (50%), Gaps = 20/313 (6%)

Query: 154 LGDRKSSNSNTDIDS---TSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCS 210
           LGD    +  T +D+       ++    G T +     +V+TWG     ++     G   
Sbjct: 15  LGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKY 74

Query: 211 RPRL-QSLPSNI-RHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLE 265
            PR+ QSL   I   +  G + T  +   G L  +G G    LG  +      PKRV   
Sbjct: 75  VPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRV--- 131

Query: 266 AAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+V  +V++  C   H   VT+ G +Y+WG  E+G  GHG T   +    ++  +  KR
Sbjct: 132 EALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKR 191

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA----VSC 379
           V Q+SA   H+A VT+ G L+TWGEG  GRLGH   ++ H+PT+V  +  VG     VSC
Sbjct: 192 VAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYM--VGKKPRQVSC 249

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT V+S+DG  +++ G G  G+LGH D     TP  +EAL    V ++  G S SVA
Sbjct: 250 GGFHTAVVSEDGR-LYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVA 308

Query: 440 LTWDGLVFWWGLG 452
           LT  GLV+ WG G
Sbjct: 309 LTVKGLVYTWGNG 321



 Score =  139 bits (351), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 14/299 (4%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           ++ I  G   T +L + G +  +G+G    LG  +   + +P+     A  + L V+ C 
Sbjct: 35  VQQIACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVT-CG 93

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             H   VT  G++Y+WG G +GKLGHG+      PK +   L G  V Q++ G  H+A V
Sbjct: 94  SYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEA-LVGATVAQIACGSRHTAIV 152

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTV 394
           T  G LYTWG+ ++G  GHG+ +  ++ P L+  ++   V  +S    HT +++  G  +
Sbjct: 153 TASGALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGE-L 211

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           ++ G G  G+LGH       +P +++ +   + R+V  G   +  ++ DG ++ +G G  
Sbjct: 212 FTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEH 271

Query: 455 -----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                +  ++  TP  V  L    +  ++ G SH +AL+    VY WG+   G+ G  N
Sbjct: 272 GQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN 330



 Score =  133 bits (335), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 13/240 (5%)

Query: 190 VYTWGCNLHHQIL--DEVRGKCSRPRLQSL-PSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +YTWG  ++ ++   DE  G  +  R+++L  + +  I  G   T ++ ++G L  +G  
Sbjct: 106 LYTWGGGMYGKLGHGDEA-GHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDK 164

Query: 247 WLGLA----NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G+A        Q LP+ +   AA     +S C   H   VT  GE+++WG G+ G+LG
Sbjct: 165 ENGVAGHGETEGHQYLPRLLESMAAKRVAQISACG-FHTAIVTDAGELFTWGEGKFGRLG 223

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           H +  +   P  I+  + GK+  QVS G  H+A V+EDG LYT+G G+HG+LGH D  ++
Sbjct: 224 HMSERNCHSPT-IVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNK 282

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            TPT V  L    V  ++CG SH++ L+  G  V++ G+G+ GKLGH +  KV  P+ +E
Sbjct: 283 MTPTFVEALDGMFVSQITCGWSHSVALTVKG-LVYTWGNGDHGKLGHGNGRKVAVPQAVE 341



 Score =  102 bits (254), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 16/198 (8%)

Query: 181 TDISVAHSKVYTWGCNLHHQILD--EVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDS 236
           T I  A   +YTWG +  + +    E  G    PRL +S+ +  +  I A  F T ++  
Sbjct: 149 TAIVTASGALYTWG-DKENGVAGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTD 207

Query: 237 TGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK------CSEAHVLTVTSEGEV 290
            G L  +G+G  G     +  + +R      IV   V K      C   H   V+ +G +
Sbjct: 208 AGELFTWGEGKFG----RLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRL 263

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           Y++G GEHG+LGH + +++  P  +   L G  V+Q++ G SHS A+T  GL+YTWG GD
Sbjct: 264 YTFGGGEHGQLGHNDRVNKMTPTFVEA-LDGMFVSQITCGWSHSVALTVKGLVYTWGNGD 322

Query: 351 HGRLGHGDLKSRHTPTLV 368
           HG+LGHG+ +    P  V
Sbjct: 323 HGKLGHGNGRKVAVPQAV 340



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSG 400
           ++TWG G+ G+LG GD   +  PT V  L  VG   ++CG  HT+VL+ DG  V++ G G
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGE-VFTWGRG 60

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RS 455
           + G+LGH D G    P++ ++L    V +V  G+  + A+T +G ++ WG G+       
Sbjct: 61  DDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHG 120

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                 TP  V  L    +  ++ G  H   ++    +Y WG    G  G 
Sbjct: 121 DEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGH 171



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 8/147 (5%)

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V++ G G  G+LG  DT     P  ++ALR   V+++  G+  +V LT DG VF WG   
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
              LG   +   +  P +   L+   ++ V+ G  H  A++   ++Y WG    G+ G  
Sbjct: 62  DGRLGHGDNGWKY-VPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHG 120

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGS 534
           + +     P +V  L    V QI  GS
Sbjct: 121 DEAGHA-TPKRVEALVGATVAQIACGS 146


>gi|195482065|ref|XP_002101895.1| GE17875 [Drosophila yakuba]
 gi|194189419|gb|EDX03003.1| GE17875 [Drosophila yakuba]
          Length = 1023

 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/340 (35%), Positives = 169/340 (49%), Gaps = 19/340 (5%)

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
           L     +PLP         +S++   C   H L + S    YSWG GE  +LGHG+T ++
Sbjct: 598 LGKPEAEPLPMEEVAHEVFISIA-GHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHAR 656

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
             P  I   L    V  V  G S+SAA+T  G L TWG G + RLGHG+   R  PTLV 
Sbjct: 657 AVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 715

Query: 370 ELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
            LSD      A+  G++H+L L+ +G  V++ G G+ GKLG+ +      P ++E L   
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKLGNGNCNGSLQPILVETLP-- 772

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFH---TPVLVTGLSSHQIVDVS 478
           RV++V AG+ FSVAL+ +G ++ WG    LG +    S H    P LV+ L   +IVDV+
Sbjct: 773 RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVHGCSVPRLVSSLQHKRIVDVA 832

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           +  +H LALS   EV+ WG N   Q C     S P+ +   +V L       I   S  S
Sbjct: 833 VSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQS 892

Query: 538 IAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSA 577
           + +T          A  P  VD+   TF L+ + L   S+
Sbjct: 893 LVWTQSSHQGVPRRA--PFVVDLGEPTFRLLDQLLSMCSS 930



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 52/308 (16%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLP----------SNIRHIEAGQFCTFLLDSTG 238
           K+YTW              +  +P  + LP          S   H E   F    +DS  
Sbjct: 592 KLYTW--------------RLGKPEAEPLPMEEVAHEVFISIAGHCEGRHF--LAIDSNH 635

Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
               +G G    LG  +T  + +P ++  LE   V      CS  +   +T  G + +WG
Sbjct: 636 NAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS--YSAAITCGGNLLTWG 693

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHG 352
            G + +LGHGN+  +  P L++  L    V  V+  +G +HS A+T +GL++ WG+GD+G
Sbjct: 694 RGTYARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752

Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTG 411
           +LG+G+      P LV  L  V  V  G   ++ LS +G    W    G    LGH+   
Sbjct: 753 KLGNGNCNGSLQPILVETLPRVQRVFAGSQFSVALSSEGQLYTW----GKATCLGHQLVE 808

Query: 412 K----VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS---- 459
           +     + P+++ +L+  R+  V    +  +AL+  G VF WG      +  +S+S    
Sbjct: 809 RSVHGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPL 868

Query: 460 FHTPVLVT 467
             TP+LV+
Sbjct: 869 LRTPILVS 876


>gi|195168454|ref|XP_002025046.1| GL26838 [Drosophila persimilis]
 gi|194108491|gb|EDW30534.1| GL26838 [Drosophila persimilis]
          Length = 828

 Score =  161 bits (408), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 220/447 (49%), Gaps = 31/447 (6%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           IVS++ S C   H + +      YSWG GE  +LGHG+T ++  P  I      + V  V
Sbjct: 194 IVSIA-SHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKINS--LDRCVKAV 250

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGES 382
             G S+SAA+T  G LYTWG G + RLGHG+   +  PT+V  L+     DV A+  G++
Sbjct: 251 FCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDV-ALGSGDA 309

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+L L+ +GH V++ G  + GKLG+ +     +P ++E+L K  V++V AG  FS+ALT 
Sbjct: 310 HSLCLTSEGH-VYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQRVFAGAQFSMALTT 366

Query: 443 DGLVFWWG----LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
           DG ++ WG    LG   +  S+     P L++GL   +IVDV++G +H LALS   EV+ 
Sbjct: 367 DGQLYSWGKASCLGHQLVERSAQWCSIPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFG 426

Query: 496 WGSNTMGQ-CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
           WG N   Q C     S P+ +   +V L  +    +   +  S+ +T   S+        
Sbjct: 427 WGRNDSQQICPSSVSSEPLLRVPILVALPTLPASGVACTASQSLIWTQ--SSRQGVPLRC 484

Query: 555 PLCVDVRPHTFTLIREFLEQYSA--CFETGDYIPFCSKVTHAQFILL-LLRLLSSHLYLA 611
           P  +D    TF L+ + L   S+    +T +    C  V     + L LL L+ + +   
Sbjct: 485 PFVIDPGEPTFRLLDQLLSMCSSQDNRQTPNQESECIAVACLNLVRLQLLALIINGVEPR 544

Query: 612 LIGARSSSVLGNETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLL 670
            +G  S    G    +L+  +  L    +    I+      L  G S+LLP   E+   L
Sbjct: 545 QVGLASG---GRLLGSLKSRILSLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTL 601

Query: 671 KTLLSQD--HPLSNGQRMLLGVITSSL 695
            +LL  +     S+G R +  ++ SSL
Sbjct: 602 TSLLPSEPGQASSSGHRFMTDLLVSSL 628


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  160 bits (404), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 170/341 (49%), Gaps = 19/341 (5%)

Query: 182 DISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI--RHIEAGQFCTFLLDSTGG 239
           ++ V  S+VY WG    + +L         P    L  N+    I  G    F++   GG
Sbjct: 119 EMRVEPSEVYVWGSK-RNLLLAADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGG 177

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +   GKG    LGL N     +P+++P L   +V+         H + +T+EG+VYSWG 
Sbjct: 178 IFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGC 237

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           G+ G+LGHGNTL    P LI   L  K VT+++ G  HS AV  DG +++WG+G +G LG
Sbjct: 238 GDRGQLGHGNTLGYLDPTLI-DELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALG 296

Query: 356 HGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGK 412
           HG+  ++  P  +  L+   + AV+CGE +T+ ++ D   VWS G G  G+LG+  +   
Sbjct: 297 HGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD--DVWSWGLGGNGELGYGVEMPS 354

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P  IEAL    +  V  G + S A++ +G V+ WG      LGL +  +      + 
Sbjct: 355 YYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQ 414

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
             L   +I  V     H LA+ +  +VY WGS  +G  G D
Sbjct: 415 GDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGND 455



 Score = 68.6 bits (166), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 12/206 (5%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTP--TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +Y WG      L   D K+   P  + + E  D   ++CG     V+S++G  +++ G G
Sbjct: 127 VYVWGS-KRNLLLAADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNG-GIFACGKG 184

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVC--AGTSFSVALTWDGLVFWWGLGLRS--- 455
           ++G LG  +   V  P+ I  L    V  V    G   ++ALT +G V+ WG G R    
Sbjct: 185 HMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLG 244

Query: 456 --SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +++ +  P L+  L S ++  ++ G  H +A+    ++++WG  + G  G  N    +
Sbjct: 245 HGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQL 304

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
             P K++ L    +  +  G  ++IA
Sbjct: 305 -LPKKIMSLNGKHIMAVACGECYTIA 329


>gi|195567859|ref|XP_002107476.1| GD17489 [Drosophila simulans]
 gi|194204883|gb|EDX18459.1| GD17489 [Drosophila simulans]
          Length = 1505

 Score =  159 bits (402), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 205/424 (48%), Gaps = 27/424 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            YSWG GE  +LGHG+T ++  P  I   L    V  V  G S+SAA+T  G L TWG G
Sbjct: 224 AYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 282

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            + RLGHG+   R  PTLV  LSD      A+  G++H+L L+ +G  V++ G G+ GKL
Sbjct: 283 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG-LVFAWGDGDYGKL 341

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LG---LRSSSI 458
           G+ +      P ++E+L   RV++V AG+ FSVAL+ +G ++ WG    LG   +  S  
Sbjct: 342 GNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQ 399

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFSNPVDQPS 517
               P LV+ L   +IVDV++  +H LALS   EV+ WG N   Q C     S P+ +  
Sbjct: 400 GCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTP 459

Query: 518 KVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSA 577
            +V L       I   S  S+ +T          A  P  VD+   TF L+ + L   S+
Sbjct: 460 ILVSLPTFPASGIACTSAQSLVWTQSSHQGVPRRA--PFVVDLGEPTFRLLDQLLGMCSS 517

Query: 578 --CFETGDYIPFCSKVTHAQ-FILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFK 634
               +T +    C  V     F L LL L+++ +    +G  S S L     +L+  +  
Sbjct: 518 QDNRQTPNQESECIAVACLNLFRLQLLALIANGVEPRQVGLASGSRL---LCSLKTRILG 574

Query: 635 LV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD--HPLSNGQRMLLGVI 691
           L    +    I+      L  G S+LLP   E+   L +LL  +     S G R +  ++
Sbjct: 575 LAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPGQASSAGHRFMTDLL 634

Query: 692 TSSL 695
            SSL
Sbjct: 635 VSSL 638



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 44/343 (12%)

Query: 248 LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
           LG  +T  + +P ++  LE   V      CS  +   +T  G + +WG G + +LGHGN+
Sbjct: 235 LGHGDTHARAVPTKIAALEQHCVQSVYCGCS--YSAAITCGGNLLTWGRGTYARLGHGNS 292

Query: 307 LSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
             +  P L++  L    V  V+  +G +HS A+T +GL++ WG+GD+G+LG+G+      
Sbjct: 293 DDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQ 351

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGK----VTTPKVI 419
           P LV  L  V  V  G   ++ LS +G    W    G    LGH+   +     + P+++
Sbjct: 352 PILVESLPRVQRVFAGSQFSVALSSEGQLYTW----GKATCLGHQLVERSVQGCSVPRLV 407

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS----FHTPVLVTGLSS 471
            +L+  R+  V    +  +AL+  G VF WG      +  +S+S      TP+LV+ L +
Sbjct: 408 SSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVS-LPT 466

Query: 472 HQIVDVSIGDSHVLALSQYNE---------VYAWGSNT-------MGQC-GQDNFSNPVD 514
                ++   +  L  +Q +          V   G  T       +G C  QDN   P +
Sbjct: 467 FPASGIACTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTFRLLDQLLGMCSSQDNRQTP-N 525

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
           Q S+ + +   C+       L  IA  V P    L+S    LC
Sbjct: 526 QESECIAV--ACLNLFRLQLLALIANGVEPRQVGLASGSRLLC 566



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 10/157 (6%)

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
           +  +S G+G   +LGH DT     P  I AL +  V+ V  G S+S A+T  G +  WG 
Sbjct: 222 NNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGR 281

Query: 452 GL-----RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQC 504
           G        +S     P LV  LS H +VDV++  GD+H LAL+    V+AWG    G+ 
Sbjct: 282 GTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKL 341

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           G  N +  + QP  V  L    V+++ AGS FS+A +
Sbjct: 342 GNGNCNGSL-QPILVESLPR--VQRVFAGSQFSVALS 375


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  158 bits (400), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 101/282 (35%), Positives = 149/282 (52%), Gaps = 20/282 (7%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYS 292
           L +Y  GW     LG  N++   +P  +    A+  L + +  C ++H L VT++GEVYS
Sbjct: 77  LTIYSWGWGDFGRLGHGNSSDLFVPHPI---KALQGLEIRQIACGDSHCLAVTADGEVYS 133

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G+T     P  ++    G  V  ++AG  H+AAVT+ G LY WG G +G
Sbjct: 134 WGRNQNGQLGLGDTDDSLVPHKLLA-FEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYG 192

Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  V  + D  +  V+CG  HT+ +SQ G  +++ G    G+LGH D 
Sbjct: 193 NLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSG-KLYTYGWSKYGQLGHGDY 251

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVL 465
                P  + AL +F + +V  G   +VALT  G ++ WG      + S  +  HT P L
Sbjct: 252 ADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQL 311

Query: 466 VTGLSSHQ-IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           ++    HQ +V VS G  H +A++  N VY+WG  T GQ G 
Sbjct: 312 ISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  127 bits (318), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 13/272 (4%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H + + S   V S+G GE G+LGHG+   +  P++I G L    ++ V+ G  H+ A +
Sbjct: 15  SHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRII-GALNDCEISLVACGADHTTAYS 73

Query: 339 EDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
              L +Y+WG GD GRLGHG+      P  +  L   ++  ++CG+SH L ++ DG  V+
Sbjct: 74  ATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGE-VY 132

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
           S G    G+LG  DT     P  + A     V+ + AG   + A+T  G ++ WG G R 
Sbjct: 133 SWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWG-RY 191

Query: 456 SSISF------HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            ++          P  V  +   ++  V+ G  H +A+SQ  ++Y +G +  GQ G  ++
Sbjct: 192 GNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDY 251

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++ +  P +V  L +  + Q+  G   ++A T
Sbjct: 252 ADHL-LPHQVAALAEFNITQVSGGWRHTVALT 282



 Score =  118 bits (295), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 19/275 (6%)

Query: 186 AHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           A  +VY+WG N + Q+ L +        +L +    +++ + AG   T  +   G L  Y
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKL--Y 184

Query: 244 GKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G GW     LGL +   + LP  VP       + +  C   H + V+  G++Y++G  ++
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVP-AVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LGHG+      P  +   L    +TQVS G  H+ A+TE G LY WG    G++G GD
Sbjct: 244 GQLGHGDYADHLLPHQV-AALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD 302

Query: 359 LKSRHTPTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
           +    +P L++   +   V  VSCG  HT+ ++ D + V+S G G  G+LGH D    + 
Sbjct: 303 VDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVT-DKNNVYSWGRGTSGQLGHGDAVDRSA 361

Query: 416 PKVIEALRKFRVRKVCAG--TSFSVALTWDGLVFW 448
           PK I+AL      K C G   S   A+T  G+  W
Sbjct: 362 PKGIQALSA--DGKACEGLEKSPEPAVTGSGVANW 394



 Score =  117 bits (292), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 18/219 (8%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           ++V  VSAG SH+ A+    ++ ++G G+ G+LGHGD + RH P ++  L+D  +  V+C
Sbjct: 5   RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVAC 64

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S    T++S G G+ G+LGH ++  +  P  I+AL+   +R++  G S  +A
Sbjct: 65  GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLA 124

Query: 440 LTWDGLVFWW--------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +T DG V+ W        GLG    S+  H  +   G+S   +   + G  H  A++   
Sbjct: 125 VTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKML---AAGAEHTAAVTDGG 181

Query: 492 EVYAWGSNTMGQCGQDNFSN---PVDQPSKVVGLEDVCV 527
           ++Y WG    G  G  +  +   P + P+  VG E +C+
Sbjct: 182 KLYGWGWGRYGNLGLGDRGDRMLPAEVPA--VGDEKMCM 218


>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
          Length = 5125

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 169/327 (51%), Gaps = 25/327 (7%)

Query: 190  VYTWGCNLHHQILDEVRG-----KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
             + WG N   Q+     G     +  +P+L +L    R ++  + C        G++V G
Sbjct: 3071 AFVWGANAGGQMDSLFSGAQDMSQVPKPKLCTLLP--RGLQVAKMCI----QKEGVVVLG 3124

Query: 245  KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
                  A+    PL + +P    +V ++       H L VT +  +   G G++GKLG  
Sbjct: 3125 HNGALYASAHSGPLKRLLPHGPKVVDVAYGGY---HTLVVTEDHRLLVCGTGKNGKLGLR 3181

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            +T  Q    + + GL  + V +V+ G  HSAAVT  G LY WG   HGRLG GD   R+ 
Sbjct: 3182 DTRDQSS-LVPVPGL--RDVLRVACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQNDRYE 3238

Query: 365  PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALR 423
            PTLV  L  V  V+CG+ HTLVL+Q G  V+S G G+ G+LG  E   K+  P  ++  R
Sbjct: 3239 PTLVPNLPPVQMVACGDRHTLVLTQRG-GVYSFGCGDQGRLGIPEAPHKLLRPAKLDFGR 3297

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVS 478
                R +C G + S ALT  G ++ WG G    L + S++ H  P+ VT L+SH+IVD S
Sbjct: 3298 ARMTRVIC-GCNSSAALTDTGQLYVWGTGRSYRLGTGSMTSHMLPIRVTDLASHKIVDAS 3356

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +G  H +A+S+  +V+ WGSN   Q G
Sbjct: 3357 LGHEHGVAVSETGDVFVWGSNDSSQLG 3383



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 114/230 (49%), Gaps = 30/230 (13%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           HVL +T+ GEVYSWG   + +LG  +      P  I  G     +  V+ G  HSAAV+E
Sbjct: 141 HVLALTTRGEVYSWGSNSYAQLGRND--DPIVPTKITRGFGRSSIVYVAVGGQHSAAVSE 198

Query: 340 DGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHT 393
           DG+LYTWG G +GRLGHG  D  +   P L  +  D  +  V+C  G++HTL LS+DG  
Sbjct: 199 DGVLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGIGDAHTLALSRDG-V 257

Query: 394 VWSMGSGNL------------GKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVAL 440
           +++ G G+             GKLG   T +   P  I       +V++V  G   S  L
Sbjct: 258 IYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQISACL 317

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
           T  G ++ WG      LG   S  +  +P  +  L+ H I  V+ G SH+
Sbjct: 318 TEGGALYTWGNASGGALGNGESYGAVESPARI--LADHVIKSVTAGPSHI 365



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 147/346 (42%), Gaps = 56/346 (16%)

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH-GNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           ++S+ +  H+   +    ++S G      LGH G+TL       ++ GL  +R  QV+A 
Sbjct: 86  NLSQLNPLHIALASKATFLWSCGPPTSRLLGHEGHTLK------LVSGLENERFVQVAA- 138

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGESHTLVL 387
             H  A+T  G +Y+WG   + +LG  D      PT +T     S +  V+ G  H+  +
Sbjct: 139 IDHVLALTTRGEVYSWGSNSYAQLGRND--DPIVPTKITRGFGRSSIVYVAVGGQHSAAV 196

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV---RKVCA-GTSFSVALTWD 443
           S+DG  +++ G G+ G+LGH  +  V  P+ + AL+   +      C  G + ++AL+ D
Sbjct: 197 SEDG-VLYTWGRGSYGRLGHGTSDDVAFPQPVLALKSKDILIATVACGIGDAHTLALSRD 255

Query: 444 GLVFWWG------------------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
           G+++ +G                  LGL S+  +     +       ++  V  G     
Sbjct: 256 GVIYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVPVAIPCDFDGTKVKQVWCGRQISA 315

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            L++   +Y WG+ + G  G       V+ P+++  L D  ++ + AG          PS
Sbjct: 316 CLTEGGALYTWGNASGGALGNGESYGAVESPARI--LADHVIKSVTAG----------PS 363

Query: 546 NSAL--------SSAFTPLCVDVRPHTFTLIREFLEQYSACFETGD 583
           + AL        S + +P      P         LEQ++    T D
Sbjct: 364 HIALWSGDVRSVSHSLSPFTPSANPALLEAFARLLEQFAGSDITQD 409



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 12/162 (7%)

Query: 377  VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            V+ G  HTLV+++D H +   G+G  GKLG  DT   ++   +  LR   V +V  G   
Sbjct: 3151 VAYGGYHTLVVTED-HRLLVCGTGKNGKLGLRDTRDQSSLVPVPGLRD--VLRVACGRRH 3207

Query: 437  SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
            S A+T  G ++ WG      LGL   +  +  P LV  L   Q+V  + GD H L L+Q 
Sbjct: 3208 SAAVTATGQLYMWGCNHHGRLGLGDQNDRYE-PTLVPNLPPVQMV--ACGDRHTLVLTQR 3264

Query: 491  NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
              VY++G    G+ G     + + +P+K+        R IC 
Sbjct: 3265 GGVYSFGCGDQGRLGIPEAPHKLLRPAKLDFGRARMTRVICG 3306



 Score = 44.3 bits (103), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 9/158 (5%)

Query: 190  VYTWGCNLHHQI-LDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            VY++GC    ++ + E   K  RP +L    + +  +  G   +  L  TG L V+G G 
Sbjct: 3267 VYSFGCGDQGRLGIPEAPHKLLRPAKLDFGRARMTRVICGCNSSAALTDTGQLYVWGTGR 3326

Query: 248  ---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
               LG  + T   LP RV   A+   +  S   E H + V+  G+V+ WG  +  +LG G
Sbjct: 3327 SYRLGTGSMTSHMLPIRVTDLASHKIVDASLGHE-HGVAVSETGDVFVWGSNDSSQLG-G 3384

Query: 305  NTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
             T     P+ L+   L GK + +VS G S + AV  D 
Sbjct: 3385 ATADAAAPRPLLHPELRGKGLNRVSCG-SRAVAVWRDA 3421


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  158 bits (399), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 171/330 (51%), Gaps = 20/330 (6%)

Query: 193 WGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGK 245
           WG N   Q+      K   P      S  N+  +  G    F +   G     G    G+
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61

Query: 246 GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             LG+++ T+ P+P+++  L + +V          H   +T +G+V+ WG G+ GKLGH 
Sbjct: 62  LGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHF 120

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD  ++  
Sbjct: 121 SRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLK 179

Query: 365 PTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +     P+ IE
Sbjct: 180 PKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIE 238

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIV 475
            L    V ++  G  FS+ALT  G+V+ WG G        S +    P +V GL   +IV
Sbjct: 239 RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 298

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            V++G  H LA++   +VYAWG N  GQ G
Sbjct: 299 HVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 112/230 (48%), Gaps = 14/230 (6%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVG----AVS 378
           V QV+ G     AVT +G +Y  GE  +GRLG G    +   P  +T LS       AV 
Sbjct: 32  VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 91

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
            G  H   L+ DG   W  G G+ GKLGH        P++IEAL+  R+R +  G+S S 
Sbjct: 92  SGGRHATALTVDGKVFW-WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 150

Query: 439 ALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYN 491
           ALT  G ++ WGLG         + +   P +V  L  H+++ V+ G  D+  LAL+   
Sbjct: 151 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG 210

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            V++WG    G+ G+   S   + P  +  L    V QI  G+ FS+A T
Sbjct: 211 LVFSWGDGDFGKLGRGG-SEGCNIPQNIERLNGQGVCQIECGAQFSLALT 259


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  157 bits (397), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 10/273 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           S+VY+WG  +  Q+         +PRL    L  N+R +  G   T +L   G +  +G+
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGR 65

Query: 246 GWLGL--ANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKL 301
           G  G      ++        L +A+    V +  C   H   +   G++Y+WG GE+G+L
Sbjct: 66  GNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRL 125

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           GHG+ + Q  PKL+   L GK VT V+AG  HS+ + E G L TWG G  G+LGHGD   
Sbjct: 126 GHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETD 184

Query: 362 RHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R TP +V  +    A  V+CG  HTL+L+Q    VW+ GSG  GKLG  D  K   P +I
Sbjct: 185 RKTPKMVKGVQQCIAHEVACGTHHTLMLTQS-QEVWTWGSGEFGKLGIGDEEKHAEPIMI 243

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            AL+   V  +  G   S ALT +G+++ WG G
Sbjct: 244 TALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276



 Score =  147 bits (372), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 96/268 (35%), Positives = 142/268 (52%), Gaps = 13/268 (4%)

Query: 284 VTSEG-EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
           ++ EG EVYSWG G  G+LGHG+  +QR+P+L++  L G  V QVS G+ H+A + E+G 
Sbjct: 1   MSREGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGE 59

Query: 343 LYTWGEGDHGRLGHGDLKSRH--TPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++T+G G+ G+LG G   + +  TP LV+ L    V  V+CG  HT  L  +G  +++ G
Sbjct: 60  VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQ-LYTWG 118

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL----- 453
           SG  G+LGH D  +  +PK++E+L+   V  V AG   S  +   G +  WG G      
Sbjct: 119 SGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
                   TP +V G+      +V+ G  H L L+Q  EV+ WGS   G+ G  +     
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +P  +  L+ V V  I  G   S A T
Sbjct: 239 -EPIMITALQGVGVIHISTGGFHSAALT 265



 Score =  140 bits (354), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 88/275 (32%), Positives = 141/275 (51%), Gaps = 13/275 (4%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGK 300
           +G+G LG      +   ++  L  A +  +V +  C   H   +   GEV+++G G  G+
Sbjct: 11  WGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQ 70

Query: 301 LGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           LG G +++     P L+   L GK V QV+ G  H+ A+ ++G LYTWG G++GRLGHGD
Sbjct: 71  LGQGASVTANVSTPALV-SALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGD 129

Query: 359 LKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
              + +P LV  L   +V  V+ G  H+ V+ + G+ + + G G  G+LGH D     TP
Sbjct: 130 EVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLL-TWGGGYFGQLGHGDETDRKTP 188

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSS 471
           K+++ +++    +V  GT  ++ LT    V+ WG G    L       H  P+++T L  
Sbjct: 189 KMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQG 248

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             ++ +S G  H  AL+    +Y WG    GQ G 
Sbjct: 249 VGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283



 Score =  112 bits (279), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 9/194 (4%)

Query: 185 VAHSKVYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLL 241
           + + ++YTWG   + ++   DEVR + S   ++SL    +  + AG F + ++   G LL
Sbjct: 109 IDNGQLYTWGSGEYGRLGHGDEVR-QASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLL 167

Query: 242 VYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G+   LG  + T +  PK V      ++  V+ C   H L +T   EV++WG GE 
Sbjct: 168 TWGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVA-CGTHHTLMLTQSQEVWTWGSGEF 226

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLG G+      P +I   L G  V  +S G  HSAA+T +G+LYTWG GD G+LGHGD
Sbjct: 227 GKLGIGDEEKHAEPIMITA-LQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGD 285

Query: 359 LKSRHTPTLVTELS 372
             S++ P +V  +S
Sbjct: 286 ENSQNIPVVVEVIS 299


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 185/357 (51%), Gaps = 22/357 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
             V+TWG N + Q+ DE     S P   S  +++  I  G + T  L S G +  +G   
Sbjct: 162 GAVWTWGANWNGQLGDESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNE 221

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG  +TT +  P +V     +++++      AH + + S+G V++WG  E G+LG G
Sbjct: 222 GGQLGDGSTTDRSTPVQVSGLTDVIAIA---GGYAHTIALKSDGTVWAWGDNEGGRLGDG 278

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +T ++  P + +GGL    V  ++ G++H+ A+  DG ++ WG+ + G+LG G   +R T
Sbjct: 279 STTNRSIP-VKVGGL--SDVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRST 335

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V+ L+DV A++ G SHT+VL  DG TVW+ G    G+LG   T   +TP  +  L  
Sbjct: 336 PVKVSGLADVIAIAGGYSHTIVLRSDG-TVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD 394

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSI 479
             V  +  G   ++A+  DG ++ WG          ++I+  TPV V GL+   ++ ++ 
Sbjct: 395 --VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLT--DVIAIAG 450

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK--VVGLEDVCVRQICAGS 534
           G  H +A+     V+ WG N  GQ G  + +N    P++  + G++ V    +  GS
Sbjct: 451 GYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNR-STPAQRSLSGMKSVATPTVTTGS 506



 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 165/331 (49%), Gaps = 21/331 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
            V+  G N + Q+ D      S P   S  +++  I  G + T  L S   +  +G    G
Sbjct: 1060 VWACGANWNGQLGDGTTINRSTPVQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYG 1119

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG    T + +P  V     I++++       H + + S+G V++WG   +G+LG G+T
Sbjct: 1120 QLGDGTITNRSIPTPVTYLTNIIAIA---GGYVHTIALKSDGTVWAWGYNGYGQLGDGST 1176

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
             ++  P  + G L    V  ++  + H+ A+  DG ++ WG   +G+LG G   +R TP 
Sbjct: 1177 TNRSTPVQVSG-L--TDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPV 1233

Query: 367  LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
             V+ L+DV A++ G  HT+ L  DG TVW+ G  N G+LG   T    TP  +  L    
Sbjct: 1234 QVSGLTDVIAIAGGYVHTIALKSDG-TVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD-- 1290

Query: 427  VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
               +  G   ++AL  D  V+ WG      LG   ++I+  TPV V+GL+    + ++ G
Sbjct: 1291 AIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG-DGTTINRLTPVQVSGLT--DAIAIAGG 1347

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
            D H +AL   N V+AWGSN+ GQ G  + +N
Sbjct: 1348 DYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 18/266 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H LT+  +G V++WG   +G+LG  +T ++  P  +  GL    V  ++ G  H+ A+  
Sbjct: 154 HTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVS-GL--TDVIAIAGGAYHTIALKS 210

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG  + G+LG G    R TP  V+ L+DV A++ G +HT+ L  DG TVW+ G 
Sbjct: 211 DGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTIALKSDG-TVWAWGD 269

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T   + P  +  L    V  +  G + ++AL  DG V+ WG      LG 
Sbjct: 270 NEGGRLGDGSTTNRSIPVKVGGLSD--VIAIAGGNAHTIALKSDGTVWAWGDNEGGQLG- 326

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S+ +  TPV V+GL+   ++ ++ G SH + L     V+ WG N  GQ G  + +N  
Sbjct: 327 DGSTTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNR- 383

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
             P +V GL DV    I  G   +IA
Sbjct: 384 STPVQVSGLADVIA--IAGGVYHTIA 407



 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 130/251 (51%), Gaps = 14/251 (5%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H LT+  +G V+++G   + +LG G+T     P  + G L       ++ G  H+ A+  
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSG-L--TDAIAIAGGVYHTIALKS 658

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++TWG  + G+LG G   +R TP  V  L+DV A++ G+ HT+ L  DG TVW+ G 
Sbjct: 659 DGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTDVIAIAGGDYHTIALKSDG-TVWTWGF 717

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRS 455
              G+LG   T   +TP  ++ L    +  +  G   S+AL  DG V+ WG      L  
Sbjct: 718 NYYGQLGGGATTNRSTPVQVKGLAD--IIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGD 775

Query: 456 SSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
            S + H TPV V+GL+   I+ ++ G  H +AL     V+AWG N  GQ G    +N   
Sbjct: 776 GSTTDHLTPVQVSGLT--DIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNS-S 832

Query: 515 QPSKVVGLEDV 525
            P +V GL DV
Sbjct: 833 TPVQVSGLTDV 843



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 118/221 (53%), Gaps = 17/221 (7%)

Query: 316 MGGL-YGKRVT-----QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
           +GG+ YG   T     Q+SAG  H+  +  DG ++TWG   +G+LG     +R TP  V+
Sbjct: 131 IGGISYGSETTFIPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVS 190

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
            L+DV A++ G  HT+ L  DG TVW+ G+   G+LG   T   +TP  +  L    V  
Sbjct: 191 GLTDVIAIAGGAYHTIALKSDG-TVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIA 247

Query: 430 VCAGTSFSVALTWDGLVFWWG--LGLR---SSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
           +  G + ++AL  DG V+ WG   G R    S+ +   PV V GLS   ++ ++ G++H 
Sbjct: 248 IAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLS--DVIAIAGGNAHT 305

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           +AL     V+AWG N  GQ G  + +N    P KV GL DV
Sbjct: 306 IALKSDGTVWAWGDNEGGQLGDGSTTNR-STPVKVSGLADV 345



 Score =  104 bits (260), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 12/264 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+TWG N   Q+ D      S P      +++  I  G + T  L S G +  +G    G
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTPVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYG 721

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT +  P +V   A I++++       H + + S+G V++WG   +G+LG G+T
Sbjct: 722 QLGGGATTNRSTPVQVKGLADIIAIA---GGYVHSIALKSDGTVWAWGYNGYGQLGDGST 778

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                P  + G L    +  ++ G+ H+ A+  DG ++ WG  + G+LG G   +  TP 
Sbjct: 779 TDHLTPVQVSG-L--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPV 835

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V+ L+DV AV+    HT+ L  DG TVW+ G    G+LG   T + + P  ++ +    
Sbjct: 836 QVSGLTDVIAVTARLYHTIALKSDG-TVWTWGRNIYGQLGDGSTTERSLP--VQVIGLTD 892

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG 450
           V  +  G   ++AL  DG V+ WG
Sbjct: 893 VIAIAGGYYHTIALKSDGAVWAWG 916



 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 200/476 (42%), Gaps = 66/476 (13%)

Query: 118 LEEVLRPATHYQVDLI-RSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTY 176
           L +V+  A  Y   ++ RS   V+    T   +    LGD  ++N +T +  +    +  
Sbjct: 342 LADVIAIAGGYSHTIVLRSDGTVW----TWGHNEGGQLGDGSTTNRSTPVQVSGLADVIA 397

Query: 177 NIGDTDISVA---HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFL 233
             G    ++A      ++ WG N + Q+ D      S P   +  +++  I  G + T  
Sbjct: 398 IAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDVIAIAGGYYHTIA 457

Query: 234 LDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE--------------AAIVSLSVS-- 274
           + S G +  +G    G LG  + T +  P +  L               A  VSLS +  
Sbjct: 458 MKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALL 517

Query: 275 --------KCSEAHVLTVTSEGEVY------SWGVGEH------GKLGHGNTLSQRRPKL 314
                     + A     TS G  +      S G G        G L    T   R    
Sbjct: 518 NGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQ 577

Query: 315 IMGGLY-GKRVT-----QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
            +GG+Y G   T     Q+SAG  H+  +  DG ++ +G   + +LG G      TP  V
Sbjct: 578 NIGGIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQV 637

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           + L+D  A++ G  HT+ L  DG TVW+ G  N G+LG   T   +TP  ++ +    V 
Sbjct: 638 SGLTDAIAIAGGVYHTIALKSDG-TVWTWGWNNSGQLGDGTTINRSTP--VQVIGLTDVI 694

Query: 429 KVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
            +  G   ++AL  DG V+ WG          ++ +  TPV V GL+   I+ ++ G  H
Sbjct: 695 AIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLA--DIIAIAGGYVH 752

Query: 484 VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +AL     V+AWG N  GQ G  + ++ +  P +V GL D+    I  G + +IA
Sbjct: 753 SIALKSDGTVWAWGYNGYGQLGDGSTTDHL-TPVQVSGLTDIIA--IAGGYIHTIA 805



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 12/232 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFC-TFLLDSTGGLLVYGK--- 245
            V+ WG N + Q+ D      S P   S  +++  I AG++  T  L S G +  +G    
Sbjct: 1160 VWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAI-AGEYVHTVALKSDGTVWAWGYNGY 1218

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            G LG  +TT +  P +V     +++++       H + + S+G V++WG    G+LG G 
Sbjct: 1219 GQLGDGSTTNRSTPVQVSGLTDVIAIA---GGYVHTIALKSDGTVWTWGWNNSGQLGDGT 1275

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            T+++  P  + G L       ++ G  H+ A+  D  ++ WG   +G+LG G   +R TP
Sbjct: 1276 TINRLTPVQVSG-L--TDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTP 1332

Query: 366  TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
              V+ L+D  A++ G+ HT+ L  D +TVW+ GS + G+LG   T    TP 
Sbjct: 1333 VQVSGLTDAIAIAGGDYHTIALKSD-NTVWAWGSNSYGQLGDVSTANSLTPA 1383



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 115/221 (52%), Gaps = 15/221 (6%)

Query: 325  TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHT 384
            +Q+SAG  H+  +  DG ++  G   +G+LG G   +R TP  V+ L+DV A++ G+ HT
Sbjct: 1042 SQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTDVIAIAGGDYHT 1101

Query: 385  LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            + L  D +TVW+ GS + G+LG       + P  +  L    +  +  G   ++AL  DG
Sbjct: 1102 IALKSD-NTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDG 1158

Query: 445  LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
             V+ WG      LG   S+ +  TPV V+GL+   ++ ++    H +AL     V+AWG 
Sbjct: 1159 TVWAWGYNGYGQLG-DGSTTNRSTPVQVSGLT--DVIAIAGEYVHTVALKSDGTVWAWGY 1215

Query: 499  NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            N  GQ G  + +N    P +V GL DV    I  G + +IA
Sbjct: 1216 NGYGQLGDGSTTNR-STPVQVSGLTDVIA--IAGGYVHTIA 1253



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N + Q+ D        P   S  ++I  I  G   T  L S G +  +G    G
Sbjct: 762 VWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHNEGG 821

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT    P +V     +++++       H + + S+G V++WG   +G+LG G+T
Sbjct: 822 QLGDGTTTNSSTPVQVSGLTDVIAVTARLY---HTIALKSDGTVWTWGRNIYGQLGDGST 878

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
             +  P  ++G L    V  ++ G+ H+ A+  DG ++ WG   + +LG+   K+  TP
Sbjct: 879 TERSLPVQVIG-L--TDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTP 934



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 12/218 (5%)

Query: 154  LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQILDEVRGKCS 210
            LGD  ++N +T +  +    +    G+   +VA      V+ WG N + Q+ D      S
Sbjct: 1171 LGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRS 1230

Query: 211  RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAA 267
             P   S  +++  I  G   T  L S G +  +G    G LG   T  +  P +V     
Sbjct: 1231 TPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTD 1290

Query: 268  IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
             ++++     + H + + S+  V++WG   +G+LG G T+++  P  + G L       +
Sbjct: 1291 AIAIA---GGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSG-L--TDAIAI 1344

Query: 328  SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            + G  H+ A+  D  ++ WG   +G+LG     +  TP
Sbjct: 1345 AGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLTP 1382


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  153 bits (386), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 176/367 (47%), Gaps = 21/367 (5%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           V+   VY WG     QI D      + P      +++  I  G   T  L S G +  +G
Sbjct: 50  VSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIHTGVRSTMALRSDGTVWTWG 109

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG+  T  + +P  V   + I   ++S     H + +T  G V++WG  ++G+L
Sbjct: 110 SNENGQLGIGTTADKNVPTPVSGLSGI--KAISGGLGYHSMALTENGTVWTWGKNDNGEL 167

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G+G T+ Q  P L++G      VT ++AG  +S A+  DG ++ WG   +G LG G +  
Sbjct: 168 GNGTTVQQNSPVLVIGL---SDVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGTIVD 224

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           +HTP  V+ LSDV A++ G SH+L + QDG TVW+ G    G LG       T P  +  
Sbjct: 225 KHTPVQVSGLSDVIAITAGGSHSLAIKQDG-TVWAWGINMYGTLGDGTRTNRTIPVKVRN 283

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L+   ++ +  G   S+AL  +G V+ WG      LGL  +S S  TP  +TG+    ++
Sbjct: 284 LQ--HIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNS-SRTTPEQLTGI--EHVL 338

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
           D++ G  H  AL +   V+ WG N+ GQ G D   N  + P+    + D        G L
Sbjct: 339 DIAGGGFHSAALKKDGRVWGWGLNSSGQIG-DGTRNDRNAPALTKAVLDTTAPDTGRGML 397

Query: 536 FSIAYTV 542
                TV
Sbjct: 398 SPYLITV 404



 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 161/322 (50%), Gaps = 21/322 (6%)

Query: 226 AGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL 282
           AG + T  L S+G + V+G   +G +G A    +  P +      ++ +     S    +
Sbjct: 41  AGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIHTGVRS---TM 97

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
            + S+G V++WG  E+G+LG G T  +  P  +  GL G +      G+ HS A+TE+G 
Sbjct: 98  ALRSDGTVWTWGSNENGQLGIGTTADKNVPTPVS-GLSGIKAISGGLGY-HSMALTENGT 155

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           ++TWG+ D+G LG+G    +++P LV  LSDV A++ G  ++L L  DG T+W+ G+   
Sbjct: 156 VWTWGKNDNGELGNGTTVQQNSPVLVIGLSDVTAIAAGGYYSLALKSDG-TIWAWGANGN 214

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSS 457
           G+LG        TP  +  L    V  + AG S S+A+  DG V+ WG+ +       + 
Sbjct: 215 GELGDGTIVDKHTPVQVSGLSD--VIAITAGGSHSLAIKQDGTVWAWGINMYGTLGDGTR 272

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            +   PV V  L    I  ++ G  H LAL Q   V+ WG N+ GQ G  + S+    P 
Sbjct: 273 TNRTIPVKVRNL--QHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRT-TPE 329

Query: 518 KVVGLEDVCVRQICAGSLFSIA 539
           ++ G+E V    I  G   S A
Sbjct: 330 QLTGIEHVL--DIAGGGFHSAA 349


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  152 bits (385), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 190/370 (51%), Gaps = 28/370 (7%)

Query: 187 HSKVYTWGCNLHHQI---LDEVRGKCSRPRLQSLPSNIRHIEAG-QFCTFLLDSTGGLLV 242
           ++++++WG +   Q+     ++      PR  +    I+++  G +   F+   T G +V
Sbjct: 81  YTEIFSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFI---TTGNMV 137

Query: 243 YG-----KGWLGLANTTIQPLPKRVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWGVG 296
           Y       G LG+ + +++     + +EA +    +S  C   H L  T  G+VYSWG G
Sbjct: 138 YSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTERGDVYSWGQG 197

Query: 297 EHGKLGHGNTLSQRRPKLI---MGGLYGK-RVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
             G LG GN   Q  PKLI      L  K ++ QVSAG   SA + + G +YT G+ D G
Sbjct: 198 IFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYTCGQNDAG 257

Query: 353 RLGHGDLKSRHTPTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           +LG G     + P  + +  + V  ++CG+ H L+L++ G TV+S G+ + G+LG  +  
Sbjct: 258 QLGIGGRDQENIPISIKKFPERVSMIACGQMHLLMLTKQG-TVYSCGANSFGQLGLNNKR 316

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWGLGLRSSSISFHTPVLVTGLS 470
             ++P +I+ +    +R V AG SFS ++++D G ++ WG G+    ++ H    + G++
Sbjct: 317 NSSSPLLIQDISHIPMRYVAAG-SFSASISYDSGDLYLWGSGVFGEFLTPHRVKTIKGMT 375

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVVGLEDVCVRQ 529
               V VSIG+   +A++Q   VY+WG N  G+ GQ +F   P   P  +  L D  V  
Sbjct: 376 ----VSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPT--PQIINQLNDKIVTL 429

Query: 530 ICAGSLFSIA 539
           +  G  FSIA
Sbjct: 430 VSCGRNFSIA 439



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 35/268 (13%)

Query: 190 VYTWG---------CNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
           VY+WG          NL  Q L ++    S  +L S  S +  + AG   + +LD +G +
Sbjct: 191 VYSWGQGIFGALGAGNLDDQFLPKLI-HISHDQL-STKSQMIQVSAGMRFSAILDQSGRV 248

Query: 241 LVYGK---GWLGLANTTIQPLP---KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
              G+   G LG+     + +P   K+ P   ++++     C + H+L +T +G VYS G
Sbjct: 249 YTCGQNDAGQLGIGGRDQENIPISIKKFPERVSMIA-----CGQMHLLMLTKQGTVYSCG 303

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGR 353
               G+LG  N  +   P L++  +    +  V+AG S SA+++ D G LY WG G  G 
Sbjct: 304 ANSFGQLGLNNKRNSSSP-LLIQDISHIPMRYVAAG-SFSASISYDSGDLYLWGSGVFGE 361

Query: 354 LGHGDLKSRHTPTLVTELSDVG-AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
                     TP  V  +  +  +VS G    + ++QDG  V+S G  N G+LG  D  +
Sbjct: 362 FL--------TPHRVKTIKGMTVSVSIGNHFGIAVNQDG-IVYSWGHNNSGELGQGDFDE 412

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             TP++I  L    V  V  G +FS+AL
Sbjct: 413 RPTPQIINQLNDKIVTLVSCGRNFSIAL 440


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  152 bits (385), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 31/344 (9%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           S+I  +  G   +  + ++G L+++G G    LG  N     +P RV L  ++ ++    
Sbjct: 42  SSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVP-RVNL--SLKNVVQVA 98

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHG--------NTLSQRRPKLIMGGLYGKRVTQV 327
           CS+ H   + S GE+Y+WG  ++GKLGHG        N +SQ    + +  L G++V QV
Sbjct: 99  CSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQ---PMKVKALEGEKVIQV 155

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
           S G  H+  +T+D    TWG G  GRLGHGD +   TP L+  L+   +  +SCG  HT 
Sbjct: 156 SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTA 215

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDG 444
           +L   G  ++  G G  GKLG   T  V  P+++E  L   ++ KV  G+  S A+T  G
Sbjct: 216 ILLVTG-KLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCG 274

Query: 445 LVFWWGLGLRSSSI------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG- 497
            V+ WG G R   I       F +P  ++ L    IVD+S G+SH +ALS   ++Y WG 
Sbjct: 275 KVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM 334

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +  +G   Q    N    PSK   L++  + Q+   S  SIA +
Sbjct: 335 TKNIGHGIQGIHPN---MPSKHPILQNKNIVQVVCSSSHSIALS 375



 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 14/268 (5%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           S+  V  WG  E+G+ G         P L+ G  +   +++VS G ++SAA+T  G L  
Sbjct: 6   SKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLIL 65

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG G  G+LG G+L+    P +   L +V  V+C + HT  +  +G  +++ G    GKL
Sbjct: 66  WGYGGCGQLGFGNLEDCLVPRVNLSLKNVVQVACSDRHTAAILSNGE-LYTWGCSKNGKL 124

Query: 406 GHED------TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR----- 454
           GH           V+ P  ++AL   +V +V  G+  +  LT D     WGLGL+     
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGH 184

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             +    TP L+  L+   I ++S G  H   L    ++Y +G    G+ G  + ++ V 
Sbjct: 185 GDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS-TDDVL 243

Query: 515 QPSKVVG-LEDVCVRQICAGSLFSIAYT 541
            P  + G LED+ + ++  GS  S A T
Sbjct: 244 IPRLLEGPLEDIQITKVSLGSQHSAAVT 271



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 25/275 (9%)

Query: 185 VAHSKVYTWGCNLHHQI------LDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDS 236
           +++ ++YTWGC+ + ++      L       S+P ++++L    +  +  G + T  L  
Sbjct: 108 LSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD 167

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
               L +G   +G LG  +T     PK +   A +    +S C   H   +   G++Y +
Sbjct: 168 DKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEIS-CGGHHTAILLVTGKLYMF 226

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G  GKLG G+T     P+L+ G L   ++T+VS G  HSAAVT+ G +YTWG+G  GR
Sbjct: 227 GGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GR 284

Query: 354 LGH---GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGH 407
           LGH   G      +P  ++ L    +  +SCG SH++ LS  G    W M       +GH
Sbjct: 285 LGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTK----NIGH 340

Query: 408 EDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
              G     P     L+   + +V   +S S+AL+
Sbjct: 341 GIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALS 375


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  152 bits (385), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 31/344 (9%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           S+I  +  G   +  + ++G L+++G G    LG  N     +P RV L  ++ ++    
Sbjct: 42  SSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVP-RVNL--SLKNVIQVA 98

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHG--------NTLSQRRPKLIMGGLYGKRVTQV 327
           CS+ H   + S GE+Y+WG  ++GKLGHG        N +SQ    + +  L G++V QV
Sbjct: 99  CSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQ---PMKVKALEGEKVIQV 155

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
           S G  H+  +T+D    TWG G  GRLGHGD +   TP L+  L+   +  +SCG  HT 
Sbjct: 156 SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTA 215

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDG 444
           +L   G  ++  G G  GKLG   T  V  P+++E  L   ++ KV  G+  S A+T  G
Sbjct: 216 ILLVTG-KLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCG 274

Query: 445 LVFWWGLGLRSSSI------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG- 497
            V+ WG G R   I       F +P  ++ L    IVD+S G+SH +ALS   ++Y WG 
Sbjct: 275 KVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM 334

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +  +G   Q    N    PSK   L++  + Q+   S  SIA +
Sbjct: 335 TKNIGHGIQGIHPN---MPSKHPILQNKNIVQVVCSSSHSIALS 375



 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 14/268 (5%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           S+  V  WG  E+G+ G         P L+ G  +   +++VS G ++SAA+T  G L  
Sbjct: 6   SKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLIL 65

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG G  G+LG G+L+    P +   L +V  V+C + HT  +  +G  +++ G    GKL
Sbjct: 66  WGYGGCGQLGFGNLEDCLVPRVNLSLKNVIQVACSDRHTAAILSNGE-LYTWGCSKNGKL 124

Query: 406 GHED------TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR----- 454
           GH           V+ P  ++AL   +V +V  G+  +  LT D     WGLGL+     
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGH 184

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             +    TP L+  L+   I ++S G  H   L    ++Y +G    G+ G  + ++ V 
Sbjct: 185 GDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS-TDDVL 243

Query: 515 QPSKVVG-LEDVCVRQICAGSLFSIAYT 541
            P  + G LED+ + ++  GS  S A T
Sbjct: 244 IPRLLEGPLEDIQITKVSLGSQHSAAVT 271



 Score = 85.1 bits (209), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 25/275 (9%)

Query: 185 VAHSKVYTWGCNLHHQI------LDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDS 236
           +++ ++YTWGC+ + ++      L       S+P ++++L    +  +  G + T  L  
Sbjct: 108 LSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD 167

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
               L +G   +G LG  +T     PK +   A +    +S C   H   +   G++Y +
Sbjct: 168 DKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEIS-CGGHHTAILLVTGKLYMF 226

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G  GKLG G+T     P+L+ G L   ++T+VS G  HSAAVT+ G +YTWG+G  GR
Sbjct: 227 GGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GR 284

Query: 354 LGH---GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGH 407
           LGH   G      +P  ++ L    +  +SCG SH++ LS  G    W M       +GH
Sbjct: 285 LGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTK----NIGH 340

Query: 408 EDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
              G     P     L+   + +V   +S S+AL+
Sbjct: 341 GIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALS 375


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 164/330 (49%), Gaps = 23/330 (6%)

Query: 215 QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVS 274
           +S  S IR    G+  T  L++ G +  +G G LG  +TT  P P +V     + S+   
Sbjct: 35  KSTYSGIRMAAGGESHTLALNANGTVWAWGGGQLGNGSTTGSPAPVQV---QDLHSVEAI 91

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
               +H L + S+G V++WG   +G+LG G+T  +  P  + G    + +   +A + HS
Sbjct: 92  AAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPVQVEGL---RSIVGAAAHYDHS 148

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+  DG ++ WG  ++G+LG G    RHTP  V  L  V A+S G  ++L +  DG TV
Sbjct: 149 LALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDSVVAISSGFGYSLAVKSDG-TV 207

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           W+ G    G+LG+  T + + P  ++ L    V  V +G   ++A+  DG V+ WG  L 
Sbjct: 208 WAWGKNEYGQLGNGSTTQSSAPVQVQGLHS--VTAVASGDYHNLAIKRDGTVWSWGPNLA 265

Query: 455 -----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
                 S +  +TPV V G SS   VDV  G  H LAL     V+AWG+    + G   F
Sbjct: 266 GQLGDGSDMDRYTPVQVEGFSS--AVDVDAGFGHSLALKSDGTVWAWGNYQFNEWG---F 320

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +    P +V  L+ V    I AG+  S+A
Sbjct: 321 GSST--PVQVQELDSVV--DIAAGTQHSLA 346



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 106/265 (40%), Gaps = 54/265 (20%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQILDEVRGKCS 210
           LGD  ++  NT +       +       D S+A      V+ WG N + Q+ D  +    
Sbjct: 118 LGDGSTTGRNTPVQVEGLRSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRH 177

Query: 211 RP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEA 266
            P R++ L S +  I +G   +  + S G +  +GK   G LG  +TT    P +V    
Sbjct: 178 TPVRVKGLDS-VVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQV---Q 233

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG--------- 317
            + S++     + H L +  +G V+SWG    G+LG G+ + +  P  + G         
Sbjct: 234 GLHSVTAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFSSAVDVDA 293

Query: 318 -----------------GLYG-----------------KRVTQVSAGHSHSAAVTEDGLL 343
                            G Y                    V  ++AG  HS AV  DG +
Sbjct: 294 GFGHSLALKSDGTVWAWGNYQFNEWGFGSSTPVQVQELDSVVDIAAGTQHSLAVRNDGTV 353

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLV 368
           + WG+ D+G+LG G   +R TP  V
Sbjct: 354 WAWGKNDNGQLGDGTSTARLTPIKV 378


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  152 bits (383), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 177/373 (47%), Gaps = 20/373 (5%)

Query: 172 PKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCT 231
           PK+      T   V+  +VY+WG     Q+ D      + P +    +++  I +G   +
Sbjct: 36  PKIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIHSGVRSS 95

Query: 232 FLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
             L   G +  +G    G LG+   T    P +VP  + I ++S       H + ++  G
Sbjct: 96  MALRQDGTVWTWGANENGQLGIGTITNVNAPAQVPGLSGIKAISGGLAY--HGMALSENG 153

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            V++WG  ++G+LG+G T+ Q  P L+ G      VT ++AG  +S A+  DG ++ WG 
Sbjct: 154 TVWTWGKNDNGELGNGTTIQQNSPVLVAGL---SDVTAIAAGGYYSLALKSDGTVWAWGV 210

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
              G LG G    RH P  V  L+DV A++ G SH+L + QDG TVW+ G+   G LG  
Sbjct: 211 NGSGELGDGTTTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDG-TVWAWGNNTYGTLGDG 269

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
                T P  +  L+   +  V  G   S+A+   G V+ WG      LGL S++ S   
Sbjct: 270 TRTHRTRPVQVRNLQ--HIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSL-I 326

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           PV V G+    + ++S G  H +A+ +   V+ WG N+ GQ G   ++N    P+    +
Sbjct: 327 PVPVPGI--EHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRGIPTLTKAV 384

Query: 523 EDVCVRQICAGSL 535
            D       +GSL
Sbjct: 385 LDTTSPDTGSGSL 397


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  151 bits (382), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 109/301 (36%), Positives = 153/301 (50%), Gaps = 41/301 (13%)

Query: 244 GKGWLGLANTTIQPLPKRVPL--EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           G G LGL N      P  + +  +  I  +   K      + +T  GEVYSWG  + G L
Sbjct: 58  GFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSIS---MALTHNGEVYSWGKNKGGIL 114

Query: 302 GHGNTLS--QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD- 358
           GH + LS    +P+ I   L GK++ Q+S G  H AAVTEDG +YTWG  + G+LGH + 
Sbjct: 115 GHEDRLSFNMTQPERIEK-LLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEE 173

Query: 359 ------------------LKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMG 398
                             L+    P  +  L ++ A  V+CG   T+VLS+DG  V++ G
Sbjct: 174 LKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDG-KVYTFG 232

Query: 399 SGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
               G LG+  D   VTTP++I+ L    + K+ AG SF  A+T  G ++ WG      L
Sbjct: 233 YNQYGSLGYVSDQNSVTTPQLIKDLND--IVKISAGYSFCAAITKQGKLYTWGNNRNGQL 290

Query: 452 GLRSSSISFHTPVLVTGL-SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           G  S S+    P +VTG  S + IVDVS GD+ + AL+Q  ++Y WG    GQ G  N S
Sbjct: 291 G-NSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKS 349

Query: 511 N 511
           +
Sbjct: 350 D 350



 Score =  111 bits (278), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 184/383 (48%), Gaps = 56/383 (14%)

Query: 154 LGDRKSSN--SNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCN----LHHQILDE 204
           LG +  +N  + T+I+  +  K+        IS+A   + +VY+WG N    L H+  D 
Sbjct: 62  LGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHE--DR 119

Query: 205 VRGKCSRP-RLQSL-PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG---------- 249
           +    ++P R++ L    I+ I  GQF    +   G +  +G    G LG          
Sbjct: 120 LSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQK 179

Query: 250 -------LANTTIQP--LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
                  L++  +Q   LP+++     I +  V+ C     + ++ +G+VY++G  ++G 
Sbjct: 180 IKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVA-CGIQFTVVLSEDGKVYTFGYNQYGS 238

Query: 301 LGH-GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG+  +  S   P+LI        + ++SAG+S  AA+T+ G LYTWG   +G+LG+   
Sbjct: 239 LGYVSDQNSVTTPQLIKDL---NDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQS 295

Query: 360 KSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
             +  P++VT     + +  VSCG++    L+Q G  +++ G G  G+LGH +   +  P
Sbjct: 296 LYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQ-LYTWGFGGDGQLGHGNKSDLYAP 354

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----------LRSSSISFHTPVLV 466
           + +E   K ++ K+  G S +  +T D  ++ +G G          + S +    TP LV
Sbjct: 355 RHVEF--KQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLV 412

Query: 467 TGLSSHQIVDVSIGDSHVLALSQ 489
                 Q+VDV+ G  H +A++Q
Sbjct: 413 QYFKGKQVVDVTCGGEHTIAITQ 435



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 16/214 (7%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAG-QFCTFLLDSTGGLLVYGK- 245
           KVYT+G N +  +     +   + P+L    ++I  I AG  FC   +   G L  +G  
Sbjct: 227 KVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCA-AITKQGKLYTWGNN 285

Query: 246 --GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG + +  Q  P  V    +  S+    C +  +  +T +G++Y+WG G  G+LGH
Sbjct: 286 RNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGH 345

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-----D 358
           GN      P+ +    + +++ +++ G SH+A +TED  LY +G G  G+LG G     +
Sbjct: 346 GNKSDLYAPRHVE---FKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASE 402

Query: 359 LKSRHTPTLVTELS--DVGAVSCGESHTLVLSQD 390
              R TP LV       V  V+CG  HT+ ++Q+
Sbjct: 403 ASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 31/228 (13%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
           ++Y+WG G  G+LG  +  + +TPT +  L+D  +  V  G+S ++ L+ +G  V+S G 
Sbjct: 50  IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGE-VYSWGK 108

Query: 400 GNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------- 450
              G LGHED  +  +T P+ IE L   +++++  G     A+T DG V+ WG       
Sbjct: 109 NKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKL 168

Query: 451 -----------LGLRSSSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
                      + ++  ++S         P  +  L + +   V+ G    + LS+  +V
Sbjct: 169 GHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKV 228

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           Y +G N  G  G  +  N V  P  +  L D+   +I AG  F  A T
Sbjct: 229 YTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIV--KISAGYSFCAAIT 274



 Score = 63.2 bits (152), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 27/228 (11%)

Query: 136 ACLVYLILVTLADDNIKPLGDRK--SSNSNTDIDSTSTPKLTYNIGD-TDISVAHS---- 188
           AC +   +V   D  +   G  +  S    +D +S +TP+L  ++ D   IS  +S    
Sbjct: 213 ACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAA 272

Query: 189 -----KVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAGQFCTFLLDSTGGL 240
                K+YTWG N + Q+ +      ++P + +     ++I  +  G      L   G L
Sbjct: 273 ITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQL 332

Query: 241 LVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G    G LG  N +    P+ V  +  I+ ++   C  +H   +T + ++Y +G G 
Sbjct: 333 YTWGFGGDGQLGHGNKSDLYAPRHVEFKQKIIKIA---CGGSHAAFITEDNQLYQFGRGS 389

Query: 298 HGKLGHGNTLS-----QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
            G+LG G  ++     +  P L+     GK+V  V+ G  H+ A+T++
Sbjct: 390 EGQLGIGQNVASEASIRSTPNLVQY-FKGKQVVDVTCGGEHTIAITQE 436


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  150 bits (379), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 89/240 (37%), Positives = 133/240 (55%), Gaps = 12/240 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C + H L V  EGE++++G  ++G+LG G+T     P+L++  L G+RV  V+ G  HS 
Sbjct: 125 CGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVA-LQGERVRSVACGSEHSL 183

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGHT 393
           A TE G +++WG G +G LG G+ + R+ PT V  L  +  VS  CG  H+ V+S+DG  
Sbjct: 184 AATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGR- 242

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V++ G    G+LGH D    T P  + ALR  R+  V  G   ++A    G ++ WG   
Sbjct: 243 VFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNK 302

Query: 451 ---LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              LGL  SS    +PVLV G L+  ++  V+ G  H +A+++   VY+WG    GQ G 
Sbjct: 303 FGQLGLGDSS-DRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361



 Score =  131 bits (330), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 88/277 (31%), Positives = 134/277 (48%), Gaps = 11/277 (3%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           ++   C  +H + + S G V SWG GE G+LGHG       PK I   L    +  V  G
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAI-STLTDAGIESVVCG 73

Query: 331 HSHSAAVTED-GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
             ++ AV    G +Y+WG GD GRLGHGD      P  +   S   V  V+CG++HTLV+
Sbjct: 74  AEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVV 133

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           + +G  +++ G    G+LG   T    +P+++ AL+  RVR V  G+  S+A T  G VF
Sbjct: 134 AGEGE-LFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVF 192

Query: 448 WWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
            WG G   +     S   + P  V GL   ++V    G  H   +S+   V+ +G +  G
Sbjct: 193 SWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYG 252

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           Q G  + ++    P +V  L    +  +  G   ++A
Sbjct: 253 QLGHGDHTDRT-VPCQVAALRHTRISSVAGGWRHTMA 288



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 15/240 (6%)

Query: 179 GDTD--ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLL 234
           GDT   +     +++T+G N + Q+       C  P+L        +R +  G   +   
Sbjct: 126 GDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAA 185

Query: 235 DSTGGLLVYG---KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEV 290
             +G +  +G    G LG   +  + LP RV  LE   + +  ++C   H   V+ +G V
Sbjct: 186 TESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEG--IRMVSAECGWRHSAVVSEDGRV 243

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           +++G  ++G+LGHG+   +  P  +   L   R++ V+ G  H+ A    G LY WG   
Sbjct: 244 FTFGWSKYGQLGHGDHTDRTVPCQV-AALRHTRISSVAGGWRHTMAADSSGNLYGWGWNK 302

Query: 351 HGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
            G+LG GD   R +P LV        V  V+CG  HT+ +++ G  V+S G G  G+LGH
Sbjct: 303 FGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGR-VYSWGRGVNGQLGH 361



 Score = 82.4 bits (202), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 190 VYTWGCNLHHQILD-EVRGKCSRPRLQSLPSNIRHI--EAGQFCTFLLDSTGGLLVYG-- 244
           V++WG   +  + D E + +    R+  L   IR +  E G   + ++   G +  +G  
Sbjct: 191 VFSWGWGRYGNLGDGESQDRYLPTRVVGL-EGIRMVSAECGWRHSAVVSEDGRVFTFGWS 249

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKL 301
             G LG  + T + +P +V   AA+    +S  +    H +   S G +Y WG  + G+L
Sbjct: 250 KYGQLGHGDHTDRTVPCQV---AALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQL 306

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           G G++  +  P L+ G L G+RV+ V+ G  H+ AVTE G +Y+WG G +G+LGHG
Sbjct: 307 GLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHG 362


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  150 bits (378), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/291 (36%), Positives = 152/291 (52%), Gaps = 23/291 (7%)

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           P  AA++  +      +H L +TS+  V++WG   +G+LG G T  ++ P    G     
Sbjct: 64  PASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQG---LP 120

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSC 379
            V QVSAG SHS A+T+DG ++ WG    G+LG G      TP  V  L   S +  V+ 
Sbjct: 121 SVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAA 180

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G +H+L L+ DG  V++ G  + G+LG+  T   + P  ++ L    V  V AG + S+A
Sbjct: 181 GGNHSLALTSDGR-VFAWGKNSSGQLGNNSTVDSSIPVQVQGL-PANVTAVAAGGNHSLA 238

Query: 440 LTWDGLVFWWGL--------GLRSSSISFHTPVLVTGL-SSHQIVDVSIGDSHVLALSQY 490
           LT DG ++ WGL        G  S+S    TPVLV GL +  + V VS G  H LAL Q 
Sbjct: 239 LTSDGRIYAWGLNSSGQLGDGTTSNS---STPVLVAGLPAGSKPVAVSAGKDHSLALMQD 295

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             VYAWG N+ GQ G +  +   + P +V GL +V    + AG   S+A T
Sbjct: 296 GTVYAWGGNSYGQLG-NGTTTASEMPVQVTGLANVTA--VSAGGSDSLALT 343



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 153/299 (51%), Gaps = 18/299 (6%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
           + AG   + +L S   +  +G    G LG   TT +  P   P +  + S++     E+H
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTP--TPAQG-LPSVAQVSAGESH 131

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
            L +T +G V++WG+   G+LG G T   R P  + G      +  V+AG +HS A+T D
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSD 191

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           G ++ WG+   G+LG+        P  V  L ++V AV+ G +H+L L+ DG  +++ G 
Sbjct: 192 GRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGNHSLALTSDGR-IYAWGL 250

Query: 400 GNLGKLGHEDTGKVTTPKVIEAL-RKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LG   T   +TP ++  L    +   V AG   S+AL  DG V+ WG      LG
Sbjct: 251 NSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLG 310

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             +++ S   PV VTGL++  +  VS G S  LAL+    VYAWG N+ GQ G    SN
Sbjct: 311 NGTTTAS-EMPVQVTGLAN--VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSN 366



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 14/250 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V+ WG N   Q+ D        P ++Q L   S I+ + AG   +  L S G +  +GK
Sbjct: 140 RVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGK 199

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG  +T    +P +V  +    +++       H L +TS+G +Y+WG+   G+LG
Sbjct: 200 NSSGQLGNNSTVDSSIPVQV--QGLPANVTAVAAGGNHSLALTSDGRIYAWGLNSSGQLG 257

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T +   P L+ G   G +   VSAG  HS A+ +DG +Y WG   +G+LG+G   + 
Sbjct: 258 DGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTAS 317

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  VT L++V AVS G S +L L+ DG+ V++ G  + G+LG   T    TP     +
Sbjct: 318 EMPVQVTGLANVTAVSAGGSDSLALTSDGY-VYAWGLNSSGQLGDGTTSNRNTP-----V 371

Query: 423 RKFRVRKVCA 432
           R F V    A
Sbjct: 372 RVFSVLSTGA 381



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 25/254 (9%)

Query: 154 LGDRKSSNSNTDID-----STSTPKLTYNIGDTDISV-AHSKVYTWGCNLHHQILDEVRG 207
           LGD  +++S T +      + ST K+    G+  +++ +  +V+ WG N   Q+ +    
Sbjct: 152 LGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTV 211

Query: 208 KCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRV- 262
             S P ++Q LP+N+  + AG   +  L S G +  +G    G LG   T+    P  V 
Sbjct: 212 DSSIPVQVQGLPANVTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVA 271

Query: 263 --PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
             P  +  V++S  K    H L +  +G VY+WG   +G+LG+G T +   P  + G   
Sbjct: 272 GLPAGSKPVAVSAGKD---HSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGL-- 326

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA---- 376
              VT VSAG S S A+T DG +Y WG    G+LG G   +R+TP  V  +   GA    
Sbjct: 327 -ANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTD 385

Query: 377 --VSCGESHTLVLS 388
             +S G S+ + LS
Sbjct: 386 LQLSDGSSNPIALS 399


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  150 bits (378), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 181/384 (47%), Gaps = 32/384 (8%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   ++  +I HI  G     L+   G +  +G+   G LG  +    IQP   R+   
Sbjct: 273 RPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQP---RMVES 329

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKR 323
            A  S+    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK + G L G +
Sbjct: 330 LAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQ 389

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGE 381
           VT V+ G  H+A VT  G L+T+G+G  G LGHGD ++   P  V  LS +   AV+CG 
Sbjct: 390 VTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAVACGV 449

Query: 382 SHT-----LVLSQDGH-----TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            HT     ++++Q         +++ G G+  +LGH D      P  + AL  +   KV 
Sbjct: 450 WHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVA 509

Query: 432 AGTSFSVALTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +V LT  G VF  G      L + S     P LV   L    + +VS G  HV+ 
Sbjct: 510 CGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVV 569

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           L+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS ++ A  +   +
Sbjct: 570 LTSKNEVYTWGKGANGRLGHGDVEDR-KTPTLVEALKDRHVKYIACGSNYTAAICL---H 625

Query: 547 SALSSAFTPLCVDVRPHTFTLIRE 570
             +SSA    C   R   F   R+
Sbjct: 626 KWVSSAEQSQCSACR-QAFGFTRK 648



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 146/332 (43%), Gaps = 86/332 (25%)

Query: 187 HSKVYTWG----CNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGL 240
             +V+TWG      L H ++ +V     +PR+ +SL  S+I  +  G+F T  +  TG L
Sbjct: 299 QGEVFTWGEESGGRLGHGVVKDV----IQPRMVESLAASSIGFVACGEFHTCAVTITGEL 354

Query: 241 LVYGKG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +G G      LG  +     +PKRV  PLE   V+ SV+ C   H   VTS G+++++
Sbjct: 355 YTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVT-SVT-CGPWHTALVTSMGQLFTF 412

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGL 342
           G G  G LGHG+  +   PK +   L G R   V+ G  H+AAV E            G 
Sbjct: 413 GDGTFGALGHGDRENISYPKEVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGK 471

Query: 343 LYTWGEGDHGRLGHGDLKSR---------------------------------------- 362
           L+TWG+GD  RLGHGD + R                                        
Sbjct: 472 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTV 531

Query: 363 -----------HTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
                        P LV +      V  VSCG  H +VL+   + V++ G G  G+LGH 
Sbjct: 532 YGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSK-NEVYTWGKGANGRLGHG 590

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           D     TP ++EAL+   V+ +  G++++ A+
Sbjct: 591 DVEDRKTPTLVEALKDRHVKYIACGSNYTAAI 622


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  150 bits (378), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 169/372 (45%), Gaps = 69/372 (18%)

Query: 246 GWLGLANTTIQ--PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL +T+ Q  P+P     E  IV ++   C   H + +T EGEVY+WG G+ G+LGH
Sbjct: 12  GQLGLGDTSDQHRPVPIDALAERRIVQIA---CGSGHTVVLTDEGEVYTWGRGDDGRLGH 68

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+   +  P+L+   L GK + QV+ G  H+AAVT  G LYTWG G +G+LGHG+     
Sbjct: 69  GDNGWKFVPRLVEE-LRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHS 127

Query: 364 TPTLVTELS--DVGAVSCGESHTLVLSQ--------------------DGHT-------- 393
           TP LV  L    V  V+CG  HT+VL +                    +GH         
Sbjct: 128 TPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEE 187

Query: 394 ------------------------VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
                                   V++ G G  G+LGH         + +EAL   RV++
Sbjct: 188 LRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQ 247

Query: 430 VCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
           V  G   + A+T  G V+ WG G          ++   P  V  L    +V ++ G SH 
Sbjct: 248 VACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHT 307

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP 544
           +AL+   EVY WG+   G+ G  N +  V  P  V  LE   V  + + +  ++A   P 
Sbjct: 308 VALTDTGEVYTWGNGDHGKLGH-NDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVDPV 366

Query: 545 S---NSALSSAF 553
           +    S L+S++
Sbjct: 367 AMLRASMLTSSY 378



 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 166/356 (46%), Gaps = 17/356 (4%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPKLTY---NIGDTDISVAHSKVYTWGCNLHHQILD 203
            +D    LGD    +    ID+ +  ++       G T +     +VYTWG     ++  
Sbjct: 9   GEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGH 68

Query: 204 EVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPL 258
              G    PRL  +    NIR +  G + T  +  +G L  +G G    LG  N T    
Sbjct: 69  GDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHST 128

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P  V     +    V+ C   H + +    +VY+WG  E+G  GHG+T   +     +  
Sbjct: 129 PFLVETLKGMQVRQVA-CGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEE 187

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGA 376
           L GK + Q+SA   H+AA++E G ++T+GEG  GRLGH   +++     V  L+   V  
Sbjct: 188 LRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQ 247

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           V+CG  HT  +++ G  V++ G G  G+LGH D    T P  +E+L +  V ++  G S 
Sbjct: 248 VACGGFHTAAVTETGE-VYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSH 306

Query: 437 SVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           +VALT  G V+ WG G       + +     P LV  L   +++ V+  + H +AL
Sbjct: 307 TVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVAL 362



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TV+S G G  G+LG  DT     P  I+AL + R+ ++  G+  +V LT +G V+ WG  
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRG 61

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG   +   F  P LV  L    I  V+ G  H  A++   ++Y WG    G+ G 
Sbjct: 62  DDGRLGHGDNGWKF-VPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            N +     P  V  L+ + VRQ+  GS  ++
Sbjct: 121 GNETGH-STPFLVETLKGMQVRQVACGSRHTV 151


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 178/374 (47%), Gaps = 20/374 (5%)

Query: 171 TPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFC 230
           TPKL      T   V+  +VY+WG     Q+ D      + P +    +++  I +G   
Sbjct: 35  TPKLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLNHVIDIHSGVRS 94

Query: 231 TFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
           +  L   G +  +G    G LG+   T    P +VP  + I ++S       H + ++  
Sbjct: 95  SMALRQDGTVWTWGANENGQLGIGTITNVNAPAQVPGLSGIKAISGGLAY--HGMALSEN 152

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G V++WG  ++G+LG+G T  Q  P L+ G      VT ++AG  +S A+  DG ++ WG
Sbjct: 153 GTVWTWGKNDNGELGNGTTTQQNSPVLVAGL---SDVTAIAAGGYYSLALKSDGTVWAWG 209

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
               G LG G    RH P  V  L+DV A++ G SH+L + QDG TVW+ G+   G LG 
Sbjct: 210 VNGSGELGDGTTTERHVPVQVAGLTDVMAIAAGGSHSLAIRQDG-TVWAWGNNTYGTLGD 268

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
                 T P  +  L+   +  V  G   S+A+   G V+ WG      LGL S++ S  
Sbjct: 269 GTRTHRTRPVQVRNLQ--HIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSL- 325

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            PV VTG+    + ++S G  H +A+ +   V+ WG N+ GQ G   ++N    P+    
Sbjct: 326 IPVPVTGI--EHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGIPTLTKA 383

Query: 522 LEDVCVRQICAGSL 535
           + D       +GSL
Sbjct: 384 VLDTTSPDTGSGSL 397


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/278 (37%), Positives = 141/278 (50%), Gaps = 18/278 (6%)

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HGN +S  RPKL+   L G  V  ++ G +HSAA+T  G + TWG+G +GRLGHGD + +
Sbjct: 1   HGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 363 HTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             P LV  L    A  ++C  G++ TL ++ D   VWS G G+ GKLG   +     P  
Sbjct: 60  LRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVWSWGDGDYGKLGRGGSDGCKLPYK 118

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS-FHTPVLVTGLSSHQ 473
           IE+L    V KV  G+ FSVALT  G V+ WG G    L   S+     P  V  L   +
Sbjct: 119 IESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 178

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           I+ ++ G  H +A S   EVY WG N  GQ G D     +  P  V  L+   + ++  G
Sbjct: 179 IISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTVTAIQWPRLVTALQGKHIVKVTCG 237

Query: 534 SLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREF 571
           S    A+T+  S S LS    PL     P  + L+R+ 
Sbjct: 238 S----AHTLALSTSQLSERLRPL--PNPPLEYDLVRDL 269



 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 13/230 (5%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +S++   C  AH   +T+ G V +WG G +G+LGHG++  Q RPKL+   L G R   ++
Sbjct: 19  MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE-ALLGYRAIDIA 77

Query: 329 --AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHT 384
             +G + +  +T+D  +++WG+GD+G+LG G       P  +  L+ +G V   CG   +
Sbjct: 78  CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFS 137

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           + L++ G  V++ G G+  +LGH     V  PK + AL+  ++  +  G+   VA +  G
Sbjct: 138 VALTKSG-AVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 196

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
            V+ WG      LG   +  +   P LVT L    IV V+ G +H LALS
Sbjct: 197 EVYTWGDNDEGQLG-DGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLALS 245


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  147 bits (372), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 140/264 (53%), Gaps = 19/264 (7%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           VYSWG GE G+LG G+T  Q RP + +  L  +R+ Q++ G  H+  +TE+G +YTWG G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRP-VPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRG 61

Query: 350 DHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           D GRLGHGD   +  P LV EL   ++  V+CG  HT  ++  G  +++ G G  GKLGH
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSG-DLYTWGGGMYGKLGH 120

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT----- 462
            +    +TP ++E L+  +VR+V  G+  +V L  +  V+ W  G + + +S H      
Sbjct: 121 GNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTW--GDKENGVSGHGDTEGH 178

Query: 463 ---PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK- 518
              P  V  L    IV +S    H  ALS++ EV+ +G    G+ G ++  N   QP   
Sbjct: 179 QYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN---QPVAR 235

Query: 519 -VVGLEDVCVRQICAGSLFSIAYT 541
            V  L    V+Q+  G   + A T
Sbjct: 236 FVDALAGKRVKQVACGGFHTAAVT 259



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 152/335 (45%), Gaps = 70/335 (20%)

Query: 246 GWLGLANTTIQ--PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL +T+ Q  P+P     E  IV ++   C   H + +T EGEVY+WG G+ G+LGH
Sbjct: 12  GQLGLGDTSDQHRPVPIDALAERRIVQIA---CGSGHTVVLTEEGEVYTWGRGDDGRLGH 68

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+   +  P+L+   L GK + QV+ G  H+AAVT  G LYTWG G +G+LGHG+     
Sbjct: 69  GDNGWKFVPRLVEE-LRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHS 127

Query: 364 TPTLVTELS--DVGAVSCGESHTLVLSQ--------------------DGHT-------- 393
           TP LV  L    V  V+CG  HT+VL +                    +GH         
Sbjct: 128 TPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEE 187

Query: 394 ------------------------VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
                                   V++ G G  G+LGH         + ++AL   RV++
Sbjct: 188 LRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQ 247

Query: 430 VCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
           V  G   + A+T  G V+ WG G          ++   P  V  L    ++ ++ G SH 
Sbjct: 248 VACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHT 307

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFS-----NPVD 514
           + L+   EVY WG+   G+ G ++ +      PVD
Sbjct: 308 VTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVD 342



 Score =  127 bits (318), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 21/358 (5%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPKLTY---NIGDTDISVAHSKVYTWGCNLHHQILD 203
            +D    LGD    +    ID+ +  ++       G T +     +VYTWG     ++  
Sbjct: 9   GEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGH 68

Query: 204 EVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPL 258
              G    PRL  +    NIR +  G + T  +  +G L  +G G    LG  N T    
Sbjct: 69  GDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHST 128

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P  V    ++    V+ C   H + +    +VY+WG  E+G  GHG+T   +     +  
Sbjct: 129 PYLVETLKSMQVRQVA-CGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEE 187

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGA 376
           L GK + Q+SA   H+AA++E G ++T+GEG  GRLGH   +++     V  L+   V  
Sbjct: 188 LRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQ 247

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           V+CG  HT  +++ G  V++ G G  G+LGH D    T P  +E+L +  V ++  G S 
Sbjct: 248 VACGGFHTAAVTETGE-VYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSH 306

Query: 437 SVALTWDGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           +V LT  G V+ WG G         ++ ++   PV V  L   +++ V+  + H +AL
Sbjct: 307 TVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDV--LDGKRVISVASYNEHTVAL 362



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TV+S G G  G+LG  DT     P  I+AL + R+ ++  G+  +V LT +G V+ WG  
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRG 61

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG   +   F  P LV  L    I  V+ G  H  A++   ++Y WG    G+ G 
Sbjct: 62  DDGRLGHGDNGWKF-VPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGH 120

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            N +     P  V  L+ + VRQ+  GS  ++
Sbjct: 121 GNETGH-STPYLVETLKSMQVRQVACGSRHTV 151


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  147 bits (372), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 177/352 (50%), Gaps = 24/352 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N   Q+ D        P ++Q L S I  I  G + +  L + G + V+G    
Sbjct: 296 VWAWGDNESGQLGDGTTNSKYIPSQVQGL-SGIVSISCGFYYSMALKNDGTVWVWGDNTS 354

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   TT +     V     +++++   C   H + + ++G V++WG    G+LG G 
Sbjct: 355 GQLGDGTTTDRNTAVPVSGLDGVIAIA---CGVNHSMALRNDGTVWTWGFNAFGQLGDGT 411

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +S +   + + GL G  +  ++ G SHS A+ +DG ++ WG+  +G+LG+G   S  TP
Sbjct: 412 KVS-KNTAVPISGLDG--IIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP 468

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
           + V+ LS + ++ CG S +  L  DG TVW+ G+   G+LG   T +V  P   E L   
Sbjct: 469 SQVSNLSGIKSIFCGYSTSFALKPDG-TVWAWGNNEYGELGKGFTTRVIYPT--ETLNIG 525

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            ++ +  G+S  +AL  DG V+ WG      LG  +++I    PV V+G+S   I  +S 
Sbjct: 526 DIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIK-SLPVQVSGISG--ITAISA 582

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
           G SH LAL     V+AWG N +GQ G D      + P +V  L  + V   C
Sbjct: 583 GGSHSLALKSDGTVWAWGQNNVGQLG-DGTKEDRNTPVQVSELSGITVISNC 633



 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 162/356 (45%), Gaps = 22/356 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+TWG N   Q+ D  +   +     S    I  I  G   +  L   G +  +G    G
Sbjct: 396 VWTWGFNAFGQLGDGTKVSKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYG 455

Query: 250 -LANTTI--QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            L N T      P +V   + I S+    C  +    +  +G V++WG  E+G+LG G T
Sbjct: 456 QLGNGTFISNTTPSQVSNLSGIKSIF---CGYSTSFALKPDGTVWAWGNNEYGELGKGFT 512

Query: 307 LSQRRPK--LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
                P   L +G      +  +S G SH  A+  DG ++ WG+  +G+LG G    +  
Sbjct: 513 TRVIYPTETLNIG-----DIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSL 567

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V+ +S + A+S G SH+L L  DG TVW+ G  N+G+LG        TP  +  L  
Sbjct: 568 PVQVSGISGITAISAGGSHSLALKSDG-TVWAWGQNNVGQLGDGTKEDRNTPVQVSELSG 626

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-PVLVTGLSSHQIVDVSIGDSH 483
             V   C   SF  AL  DG V+ WG    +  +   T P+ ++GLS   I+ +  G  H
Sbjct: 627 ITVISNCIYRSF--ALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSG--IIAIECGTYH 682

Query: 484 VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            LAL     V+AWG N  GQ G D  +   + P +V GL    V+ I  G   SIA
Sbjct: 683 NLALKNDGTVWAWGKNNFGQFG-DGTTTTTNIPVQVSGLS--GVKAIAVGGNRSIA 735



 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 18/249 (7%)

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           +E  I+ +S     E+H L + S+G V++ G  ++G+LG+ NT+    P + + GL   +
Sbjct: 173 IEGPIIKVS---GGESHTLALESDGTVWACGENDYGQLGNNNTIDINSP-IPVEGL--NK 226

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V+ +SAG  +S A+  DG ++TWGE D+G+LG G   +R +P  V  LS + A+S G SH
Sbjct: 227 VSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSGIIAISSGNSH 286

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L  DG TVW+ G    G+LG   T     P  ++ L    +  +  G  +S+AL  D
Sbjct: 287 SLALKDDG-TVWAWGDNESGQLGDGTTNSKYIPSQVQGLSG--IVSISCGFYYSMALKND 343

Query: 444 GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           G V+ WG      LG   ++   +T V V+GL    ++ ++ G +H +AL     V+ WG
Sbjct: 344 GTVWVWGDNTSGQLG-DGTTTDRNTAVPVSGLDG--VIAIACGVNHSMALRNDGTVWTWG 400

Query: 498 SNTMGQCGQ 506
            N  GQ G 
Sbjct: 401 FNAFGQLGD 409



 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 170/390 (43%), Gaps = 69/390 (17%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N + Q+ +      + P   S  S I+ I  G   +F L   G +  +G    G
Sbjct: 446 VWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYG 505

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT    P        I ++S+     +H L + ++G V++WG   +G+LG G T
Sbjct: 506 ELGKGFTTRVIYPTETLNIGDIKAISIG---SSHCLALKNDGTVWAWGDNRYGQLGDGTT 562

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
             +  P + + G+ G  +T +SAG SHS A+  DG ++ WG+ + G+LG G  + R+TP 
Sbjct: 563 TIKSLP-VQVSGISG--ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPV 619

Query: 367 LVTELSDVG----------------------------------------------AVSCG 380
            V+ELS +                                               A+ CG
Sbjct: 620 QVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECG 679

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             H L L  DG TVW+ G  N G+ G   T     P  +  L    V+ +  G + S+AL
Sbjct: 680 TYHNLALKNDG-TVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSG--VKAIAVGGNRSIAL 736

Query: 441 TWDGLVFWWGLGLRSSSIS----FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             DG V+ WG  L S S S    + T   V GLS  +IV +    S+ +AL    +V+ W
Sbjct: 737 KSDGTVWQWGRILVSVSPSTVETWTTARQVDGLS--EIVSI----SNNVALKNDGKVFTW 790

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           G+N  GQ G    +  V   + V GLE V 
Sbjct: 791 GANDYGQLGDGTTTARV-TVAPVSGLEGVA 819



 Score = 73.9 bits (180), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 53/271 (19%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +   V+ WG N   Q+ D  +   + P   S  S I  I    + +F L + G + V+G 
Sbjct: 592 SDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWG- 650

Query: 246 GWLGLANTTIQPLPK-RVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
                +++   PL K  +P++ + +S  ++ +C   H L + ++G V++WG    G+ G 
Sbjct: 651 -----SDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGD 705

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHS------------------------------- 332
           G T +   P + + GL G +   V    S                               
Sbjct: 706 GTTTTTNIP-VQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTAR 764

Query: 333 ------------HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG 380
                       ++ A+  DG ++TWG  D+G+LG G   +R T   V+ L  V  V+  
Sbjct: 765 QVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASS 824

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           ++ ++VL  DG T+ + G  N G+LG+ + G
Sbjct: 825 DTTSMVLMNDG-TIRAWGKNNFGQLGNGERG 854


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  147 bits (372), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 169/376 (44%), Gaps = 62/376 (16%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LGL +T+ Q  P  V       ++ +S C   H + +T +G+VY+WG G+ G+LGHG+
Sbjct: 12  GQLGLGDTSDQYHPILVEALQDRQTVQIS-CGSGHTVVLTDDGKVYTWGRGDDGRLGHGD 70

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              +  P+L+   L  K+V QV+ G  H+AAVT  G LYTWG G +G+LGHG+     TP
Sbjct: 71  NGWKFVPRLVED-LRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTP 129

Query: 366 TLVTELSD--VGAVSCGESHTLVL--SQDGHT---------------------------- 393
           +LV  +    V  V+CG  HT+VL  +QD +T                            
Sbjct: 130 SLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELV 189

Query: 394 ----------------------VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
                                 V++ G G  G+LGH         K I+AL   R+++V 
Sbjct: 190 EINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVA 249

Query: 432 AGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
            G   + A+T  G VF WG G          ++   P  V  L    I+ ++ G SH +A
Sbjct: 250 CGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVA 309

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           L+   EV+ WG+   G+ G  N +N V +P  +       V  + + +  ++A   P +N
Sbjct: 310 LTDKGEVFTWGNGDHGKLGH-NDTNKVTEPKLIETFNSKRVISVASYNEHTVALVNPDAN 368

Query: 547 SALSSAFTPLCVDVRP 562
              S   +    D+R 
Sbjct: 369 LQNSVLHSSYKCDMRK 384



 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 138/261 (52%), Gaps = 13/261 (4%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           VY+WG GE G+LG G+T  Q  P L+   L  ++  Q+S G  H+  +T+DG +YTWG G
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEA-LQDRQTVQISCGSGHTVVLTDDGKVYTWGRG 61

Query: 350 DHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           D GRLGHGD   +  P LV +L D  V  V+CG  HT  ++  G  +++ G G  GKLGH
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGE-LYTWGGGMYGKLGH 120

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
            +    +TP ++E+++   VR+V  G+  +V L  +  V+ WG       G   +S   +
Sbjct: 121 GNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQY 180

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVV 520
           +P  V+ L    I  +S    H  ALS+  +V+ +G    G+ G ++  N PV +   + 
Sbjct: 181 SPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC--ID 238

Query: 521 GLEDVCVRQICAGSLFSIAYT 541
            L    ++Q+  G   + A T
Sbjct: 239 ALIGKRIKQVACGGFHTAAVT 259



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 14/329 (4%)

Query: 171 TPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQ 228
           T +++   G T +     KVYTWG     ++     G    PRL        +R +  G 
Sbjct: 36  TVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGS 95

Query: 229 FCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT 285
           + T  +  +G L  +G G    LG  N      P  V     +    V+ C   H + + 
Sbjct: 96  YHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVA-CGSRHTVVLL 154

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
              +VY+WG  E+G  GHG+T   +     +  L    + Q+SA   H+AA++E+G ++T
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFT 214

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           +GEG  GRLGH   +++     +  L    +  V+CG  HT  +++ GH V++ G G  G
Sbjct: 215 FGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGH-VFTWGGGEHG 273

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSI 458
           +LGH D      P  +E+L    + ++  G S +VALT  G VF WG G       + + 
Sbjct: 274 QLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTN 333

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
               P L+   +S +++ V+  + H +AL
Sbjct: 334 KVTEPKLIETFNSKRVISVASYNEHTVAL 362



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 28/206 (13%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TV++ G G  G+LG  DT     P ++EAL+  +  ++  G+  +V LT DG V+ WG  
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRG 61

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG   +   F  P LV  L   ++  V+ G  H  A++   E+Y WG    G+ G 
Sbjct: 62  DDGRLGHGDNGWKF-VPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGH 120

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI-------AYTVPPSNSALSS-------A 552
            N  N    PS V  ++ + VRQ+  GS  ++        YT     + +S         
Sbjct: 121 GN-ENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGHQ 179

Query: 553 FTPLCVDVRPHTFTLIREFLEQYSAC 578
           ++P CV        L+   ++Q SAC
Sbjct: 180 YSPYCVS------ELVEINIKQISAC 199


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  147 bits (372), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 180/381 (47%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P   +L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG  +    P+ I G L G ++ 
Sbjct: 129 -CNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHGDLKS   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   TV     ++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
            S +V LT  G V+  G    G   +  S   P LV   ++S  ++ ++ G  HV  L+ 
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTS 367

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  VR I  G+ F+ A  +   +  +
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDR-KVPTTVEALRDRAVRHIACGANFTAAICL---HKWV 423

Query: 550 SSAFTPLCVDVR-PHTFTLIR 569
           S A    C   R P  FT  R
Sbjct: 424 SGADQSQCSSCRQPFGFTRKR 444



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 143/325 (44%), Gaps = 77/325 (23%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +V+TWG +   ++    R     PRL +SL + NI  +  G+F T  + +TG L  +G G
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDG 156

Query: 247 -----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
                 LG        +P+R+  PLE   + ++   C   H   +TS G+++++G G  G
Sbjct: 157 THNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFGDGSFG 214

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTWGE 348
            LGHG+  S   P+ +   L G +   V+ G  H+AA+ E            G L+TWG+
Sbjct: 215 VLGHGDLKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGD 273

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS------G 400
           GD  RLGHGD ++R  PT V  L D     V+CG S T+ L+  G  VW+MG+      G
Sbjct: 274 GDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSG-KVWTMGNSVYGQLG 332

Query: 401 NL---------------------------------------------GKLGHEDTGKVTT 415
           NL                                             G+LGH D      
Sbjct: 333 NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKV 392

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P  +EALR   VR +  G +F+ A+
Sbjct: 393 PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 41.2 bits (95), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  I  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AACNIDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  147 bits (371), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 166/314 (52%), Gaps = 22/314 (7%)

Query: 213  RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIV 269
            ++ +LP   + I AG      L   G +  +G    G LGL ++       R     AI 
Sbjct: 1028 KVDALPPAAK-IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS 1086

Query: 270  SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
            +++   C  +H L V  +G ++SWG   +G+LG G+  S+  P+ +        V  ++A
Sbjct: 1087 NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVN---AISNVAAIAA 1143

Query: 330  GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQ 389
            G  +S A+T DG +++WG+   G+LG GD + R+TP  V  LS+V A++ GE H+L L++
Sbjct: 1144 GEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTR 1203

Query: 390  DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            DG +VWS G  + G+LG +D     TP+ +  +    ++ + AG S S A++ +GL + W
Sbjct: 1204 DG-SVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN--IKAIAAGNSHSFAISEEGLAWAW 1260

Query: 450  --------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
                    G+G   S  + +TP  V  +S+  +V +S G+ H LAL++   ++AWG N  
Sbjct: 1261 GYNYDGQLGIGTSGSLANENTPQKVKVISN--VVGLSGGNYHSLALTEDGALWAWGDNDD 1318

Query: 502  GQCGQ--DNFSNPV 513
            GQ G    +  NPV
Sbjct: 1319 GQIGSTGGDRKNPV 1332



 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 146/261 (55%), Gaps = 16/261 (6%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           AI +++   C  +H L +  +G  +SWG   +G+LG G+ +S+  P+ +        V  
Sbjct: 595 AISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVN---ALSNVVA 651

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           ++AG  HS A+T DG L++WG+  +G+LG GD   R+TP  V  +S+V A++ G  H+L 
Sbjct: 652 MAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLA 711

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L++DG +VWS G+   G+LG  D     TP+ +  +    ++ +  G ++S+A++ +GLV
Sbjct: 712 LTRDG-SVWSWGNNTRGQLGLGDNDDRNTPQPVTTISN--IKAIAVGNNYSIAISEEGLV 768

Query: 447 FWW--------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           + W        G+G   S    +TP  V  +S+  +V +S G SH +AL++   ++AWG+
Sbjct: 769 WAWGYNCSGQLGIGTHGSLADENTPQKVIVISN--VVGLSAGSSHSIALTEDGALWAWGN 826

Query: 499 NTMGQCGQDNFSNPVDQPSKV 519
           N  GQ   +     +D P +V
Sbjct: 827 NEAGQIAAEEAIEYIDNPVQV 847



 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 20/269 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +  +G V+ WG  ++ +LG G+ +++  P+          +  V+AG   S A+  
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAP---VVSNIVSVAAGRLFSLALAS 134

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG L+ WG   +G+LG GD  +R TP+    LSDV A++ G+ H L  +Q G  VW+MG 
Sbjct: 135 DGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAAIAGGDYHALAATQSGE-VWAMGR 193

Query: 400 GNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LG   TG     P  +  L    V+ V AG  FS+AL  DG V+ WG      LG
Sbjct: 194 NDHGQLGF--TGDHADAPVQVAGLSN--VKSVAAGEFFSLALKNDGTVWAWGNNESAQLG 249

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
              +  +  TP  +  LS+  I  ++ G  H +AL++   V+AWG+N  GQ G  +F  P
Sbjct: 250 TGIAGEAVATPAPIAVLSN--ITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETP 307

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              P +V  L DV    I +G   S+A T
Sbjct: 308 K-APGRVSSLADVTA--IASGWFHSLALT 333



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 27/328 (8%)

Query: 190 VYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N ++Q+   D++      P    + SNI  + AG+  +  L S G L  +G   
Sbjct: 88  VWVWGRNDYNQLGLGDDINRLA--PEQAPVVSNIVSVAAGRLFSLALASDGSLWAWGGNY 145

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG+ +   +  P + P  + + +++     + H L  T  GEV++ G  +HG+LG  
Sbjct: 146 YGQLGMGDNDNRLTPSKTPGLSDVAAIA---GGDYHALAATQSGEVWAMGRNDHGQLGF- 201

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRH 363
            T       + + GL    V  V+AG   S A+  DG ++ WG  +  +LG G   ++  
Sbjct: 202 -TGDHADAPVQVAGL--SNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVA 258

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           TP  +  LS++ A++ G  H + L++DG +VW+ G+   G+LG  D      P  + +L 
Sbjct: 259 TPAPIAVLSNITAIAAGRRHAMALAEDG-SVWAWGANGSGQLGFGDFETPKAPGRVSSLA 317

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
              V  + +G   S+ALT DG+++ WG      LG  ++S     P  V+ +S+   V  
Sbjct: 318 D--VTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQ-SLPAQVSSISN--AVSF 372

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           + G  H LA++    V++WG N  GQ G
Sbjct: 373 AGGQRHSLAIAADGSVWSWGGNAYGQLG 400



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 146/272 (53%), Gaps = 29/272 (10%)

Query: 282  LTVTSEGEVYSWGVGEHGKLGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
            L + ++G ++SWG    G+LG G     N  +  +   +          +++AG +H+ A
Sbjct: 994  LALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDAL------PPAAKIAAGDNHALA 1047

Query: 337  VTEDGLLYTWGEGDHGRLG---HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
            +  DG +++WG    G+LG    G   +++ P  +  +S+V A++CG SH+L +++DG +
Sbjct: 1048 LAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVARDG-S 1106

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
            +WS G    G+LG  D    TTP+ + A+    V  + AG  +S+ALT DG V+ WG   
Sbjct: 1107 LWSWGYNYYGQLGLGDNYSKTTPQKVNAISN--VAAIAAGEYYSLALTRDGSVWSWGDNS 1164

Query: 451  ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
               LGL  +    +TP  V  LS+  +  ++ G+ H LAL++   V++WG N+ GQ G D
Sbjct: 1165 DGQLGLGDNE-DRNTPQKVEVLSN--VAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLD 1221

Query: 508  NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            + ++  + P  V  + +  ++ I AG+  S A
Sbjct: 1222 D-NDDRNTPQPVTTISN--IKAIAAGNSHSFA 1250



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 135/273 (49%), Gaps = 31/273 (11%)

Query: 282 LTVTSEGEVYSWGVGEHGKLG-----HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           L + ++G V+SWG    G+LG     + +  +      +           ++AG  H+ A
Sbjct: 505 LALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDAL------PLAASIAAGGGHALA 558

Query: 337 VTEDGLLYTWGEGD---HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           +  DG +++WG       G    G   + + P  +  +S+V A++CG SH+L L++DG +
Sbjct: 559 LASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLALARDG-S 617

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
            WS G    G+LG  D    TTP+ + AL    V  + AG   S+ALT DG ++ WG   
Sbjct: 618 FWSWGYNYYGQLGLGDNVSKTTPRKVNALSN--VVAMAAGDRHSLALTLDGSLWSWGDNT 675

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-Q 506
              LGL  +    +TP  V  +S+  +V ++ G  H LAL++   V++WG+NT GQ G  
Sbjct: 676 YGQLGLGDND-HRNTPRKVNAISN--VVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLG 732

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           DN      QP   +      ++ I  G+ +SIA
Sbjct: 733 DNDDRNTPQPVTTI----SNIKAIAVGNNYSIA 761



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 118/227 (51%), Gaps = 22/227 (9%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVTELSDVGAVSCGESHT 384
           V+AG   S A+  DG +++WG    G+LG G  ++    TPT V  L    +++ G  H 
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGGGHA 556

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT---PKVIEALRKFRVRKVCAGTSFSVALT 441
           L L+ DG +VWS G  ++G+LG    G  +T   P+ I A+    V  +  G S S+AL 
Sbjct: 557 LALASDG-SVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAIACGGSHSLALA 613

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
            DG  + WG      LGL   ++S  TP  V  LS+  +V ++ GD H LAL+    +++
Sbjct: 614 RDGSFWSWGYNYYGQLGL-GDNVSKTTPRKVNALSN--VVAMAAGDRHSLALTLDGSLWS 670

Query: 496 WGSNTMGQCG-QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           WG NT GQ G  DN  +  + P KV  + +V    I AG   S+A T
Sbjct: 671 WGDNTYGQLGLGDN--DHRNTPRKVNAISNVVA--IAAGYRHSLALT 713



 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 25/183 (13%)

Query: 372 SDVGAVSCGESHTLVLSQDGH--------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           S+ G   CG +  +V S+  H        TVW  G  +  +LG  D      P+  +A  
Sbjct: 58  SEPGFTGCGNAEPMVASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPE--QAPV 115

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
              +  V AG  FS+AL  DG ++ WG      LG+  +     TP    GLS   +  +
Sbjct: 116 VSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRL-TPSKTPGLS--DVAAI 172

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP-VDQPSKVVGLEDVCVRQICAGSLF 536
           + GD H LA +Q  EV+A G N  GQ G   F+    D P +V GL +  V+ + AG  F
Sbjct: 173 AGGDYHALAATQSGEVWAMGRNDHGQLG---FTGDHADAPVQVAGLSN--VKSVAAGEFF 227

Query: 537 SIA 539
           S+A
Sbjct: 228 SLA 230


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  147 bits (370), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 167/339 (49%), Gaps = 28/339 (8%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LGL +T  Q  P  V    +   + V+ C   H + ++ +G VY+WG G+ G+LGHG+
Sbjct: 18  GQLGLGDTNDQDRPVLVDALKSKGVVQVA-CGSGHTVVLSEDGAVYTWGRGDDGRLGHGD 76

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              +  P+++   L G+R+ Q + G  H+AAVT+ G LYTWG G +G+LGHG+     TP
Sbjct: 77  NGWKYVPRIVEA-LEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTP 135

Query: 366 TLVTELSDVGA----VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT-GKVTTPKVIE 420
            +V  L D GA    ++CG  HT+VL+  G  V++ G    G +GH +  G    P+++E
Sbjct: 136 CMVKHLRDEGARVTQIACGSRHTVVLTDLG-KVYTWGDKENGVVGHTNADGHQYLPRMLE 194

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIV 475
           +L+   V +V A    + ALT  G +F WG G           +   P +V  L   ++ 
Sbjct: 195 SLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVG 254

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN------------PVDQPSKVVGLE 523
            V+ G  H  A+    E+Y WG    GQ     F N             V  P+ V GL 
Sbjct: 255 HVACGGFHSAAILDSGELYTWGGGEHGQV--YTFGNGDHGKLGHGDVRKVSVPTLVAGLV 312

Query: 524 DVCVRQICAGSLFSIAYTVPPSNS-ALSSAFTPLCVDVR 561
            + V ++ + +  + A     S++ ALSS  +    D+R
Sbjct: 313 KMHVVKVASYNEHTAALAGASSSTPALSSMSSSFMTDIR 351



 Score =  134 bits (336), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 13/262 (4%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G VYSWG GE G+LG G+T  Q RP L+   L  K V QV+ G  H+  ++EDG +YTWG
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLV-DALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            GD GRLGHGD   ++ P +V  L    +   +CG  HT  ++  G  +++ G G  GKL
Sbjct: 66  RGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGE-LYTWGGGMYGKL 124

Query: 406 GHEDTGKVTTPKVIEALRK--FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           GH +     TP +++ LR    RV ++  G+  +V LT  G V+ WG      +G  ++ 
Sbjct: 125 GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNAD 184

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
              + P ++  L +  +  V+    H  AL+   E++ WG    G+ G     N +  P 
Sbjct: 185 GHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQM-VPR 243

Query: 518 KVVGLEDVCVRQICAGSLFSIA 539
            V  L    V  +  G   S A
Sbjct: 244 MVEALMGKRVGHVACGGFHSAA 265



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 145/318 (45%), Gaps = 25/318 (7%)

Query: 147 ADDNIKPLGDRKSSNSNTDID---STSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILD 203
            +D    LGD    +    +D   S    ++    G T +      VYTWG     ++  
Sbjct: 15  GEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGH 74

Query: 204 EVRGKCSRPRLQSLPSNIRHIEA--GQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPL 258
              G    PR+       R ++A  G + T  +   G L  +G G    LG  N +  P 
Sbjct: 75  GDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPT 134

Query: 259 P---KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           P   K +  E A V+     C   H + +T  G+VY+WG  E+G +GH N    +    +
Sbjct: 135 PCMVKHLRDEGARVTQIA--CGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRM 192

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SD 373
           +  L  K VTQV+A   H+AA+T  G ++TWGEG  GRLGHG  +++  P +V  L    
Sbjct: 193 LESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKR 252

Query: 374 VGAVSCGESHTLVLSQDGH----------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           VG V+CG  H+  +   G            V++ G+G+ GKLGH D  KV+ P ++  L 
Sbjct: 253 VGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLV 312

Query: 424 KFRVRKVCAGTSFSVALT 441
           K  V KV +    + AL 
Sbjct: 313 KMHVVKVASYNEHTAALA 330



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 10/212 (4%)

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMG 398
           GL+Y+WG G+ G+LG GD   +  P LV  L   G V  +CG  HT+VLS+DG  V++ G
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDG-AVYTWG 65

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LR 454
            G+ G+LGH D G    P+++EAL   R+ +   G+  + A+T  G ++ WG G    L 
Sbjct: 66  RGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLG 125

Query: 455 SSSISFH-TPVLVTGLSSH--QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             + S H TP +V  L     ++  ++ G  H + L+   +VY WG    G  G  N   
Sbjct: 126 HGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADG 185

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP 543
               P  +  L+   V Q+ A    + A T  
Sbjct: 186 HQYLPRMLESLQAKTVTQVAACGFHTAALTAA 217


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  147 bits (370), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 180/381 (47%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P   +L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG  +    P+ I G L G ++ 
Sbjct: 129 -CNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHGDLKS   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   TV     ++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
            S +V LT  G V+  G    G   +  S   P LV   ++S  ++ ++ G  HV  L+ 
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTS 367

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  VR I  G+ F+ A  +   +  +
Sbjct: 368 RSEVFTWGKGANGRLGHGDIED-RKVPTTVEALRDRAVRHIACGANFTAAICL---HKWV 423

Query: 550 SSAFTPLCVDVR-PHTFTLIR 569
           S A    C   R P  FT  R
Sbjct: 424 SGADQSQCSSCRQPFGFTRKR 444



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 143/325 (44%), Gaps = 77/325 (23%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +V+TWG +   ++    R     PRL +SL + NI  +  G+F T  + +TG L  +G G
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDG 156

Query: 247 -----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
                 LG        +P+R+  PLE   + ++   C   H   +TS G+++++G G  G
Sbjct: 157 THNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFGDGSFG 214

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTWGE 348
            LGHG+  S   P+ +   L G +   V+ G  H+AA+ E            G L+TWG+
Sbjct: 215 VLGHGDLKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGD 273

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS------G 400
           GD  RLGHGD ++R  PT V  L D     V+CG S T+ L+  G  VW+MG+      G
Sbjct: 274 GDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSG-KVWTMGNSVYGQLG 332

Query: 401 NL---------------------------------------------GKLGHEDTGKVTT 415
           NL                                             G+LGH D      
Sbjct: 333 NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKV 392

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P  +EALR   VR +  G +F+ A+
Sbjct: 393 PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 40.8 bits (94), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  I  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AACNIDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  146 bits (369), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 173/369 (46%), Gaps = 28/369 (7%)

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY- 243
            +A    + WG N H Q+ D      + P    LPSNI  +  G+         G L  + 
Sbjct: 866  LADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALGETHGLAAGEDGALWAWG 925

Query: 244  --GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G G LG  +TT  P P RV     + S+S  +   A  L V  +G  ++WG    G+L
Sbjct: 926  ANGSGQLGEGSTTPSPTPVRVKGLEGVASVSAGR---AFSLAVRQDGTAWAWGANPSGQL 982

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLK 360
            G G   SQR PK +      KRV  +SAG  H  A+ EDG ++TWG+   G+LG G    
Sbjct: 983  GDGTNHSQRVPKQVT---SVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039

Query: 361  SRHTPTLVTELSDVGAVSCGESHTL-VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KV 418
            +   P  V EL DV AV+ GE  ++ VL   G   W  GS   G+LG   TG   TP +V
Sbjct: 1040 TWMWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAW--GSNEYGQLGDGKTGPRLTPVQV 1097

Query: 419  IEALRKFR--VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLS 470
                 K R  VR V A    +VAL  DG V  WG      LG   ++     PV+V GL+
Sbjct: 1098 RIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLG-DGTTERRAAPVVVRGLT 1156

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
               +V VS G  H LAL     V+AWG+N  GQ G D  +     P +V GL+ V    I
Sbjct: 1157 G--VVAVSTGAWHSLALRSDGTVWAWGANGFGQLG-DGTTLSRTTPVRVAGLQKVVA--I 1211

Query: 531  CAGSLFSIA 539
             AG   ++A
Sbjct: 1212 GAGGYHALA 1220



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 166/362 (45%), Gaps = 26/362 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG- 244
             V  WG N   Q+ D   G   R     +P   ++  +  G      L   G L  +G 
Sbjct: 319 GSVLAWGANGSGQLGDS--GTDDRATPGEVPGLRSVAAVVGGAQHALALRGDGTLWAWGG 376

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   +    +P  +   A + S++       H L    +G V+SWG   +G+LG
Sbjct: 377 GLAGQLGHGGSERHVVPAPLLRLADVASMAAGSF---HSLAALGDGTVWSWGRNTYGQLG 433

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T ++R   + + GL G R    S GH HS AV  DG ++ WG    G+LG G  + R
Sbjct: 434 DGTT-AERHAAVRVEGLSGIRGVAAS-GH-HSLAVGADGTVWAWGRNAAGQLGDGSTRDR 490

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  V+ L+ V AV+ G SHT+ L  DG TVW+ G   LG+LG   T    TP  +   
Sbjct: 491 ARPVAVSGLTSVVAVATGGSHTMALRGDG-TVWAWGYNALGQLGDGTTVDRLTP--VRVA 547

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDV 477
           R   V  V AGT FS+AL  DG V+ WG G               PV V GL++  +  V
Sbjct: 548 RLDSVVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLTN--VTRV 605

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           + G +H LA+     V+AWG N  GQ G   +S+   +P +V GL  +    +  G   S
Sbjct: 606 AAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRF-RPVQVPGLTGITA--VSGGRSHS 662

Query: 538 IA 539
           +A
Sbjct: 663 MA 664



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 162/357 (45%), Gaps = 20/357 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D       RP      + I  +  G+  +  L   G +  +G    G
Sbjct: 621 VWAWGDNGEGQLGDGTWSDRFRPVQVPGLTGITAVSGGRSHSMALHGDGSVRAWGYNGYG 680

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG    T +  P  VP    I +L  S     HVL + ++G +  WG    G+LG G  
Sbjct: 681 QLGDGTFTSRVRPAVVPGLTGIQALHPSHL---HVLALHADGTLRGWGYNRFGQLGLGAA 737

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
               RP  + G L   RV +++ G +H+  V  DG +  WGE   G+LG G    R  P 
Sbjct: 738 GWSSRPVQVRG-L--GRVDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPV 794

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           LV  +  V +V+ G  H+L L+ DG +VW+ G+   G+LG   T     P  ++ L+   
Sbjct: 795 LVRGVPCVRSVASGVLHSLALACDG-SVWAWGANGRGQLGDGTTASRVIPARVDGLQGAV 853

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                     S+AL  DG  + WG      L   S S         L S+ I+ V++G++
Sbjct: 854 AVAAG--GDASLALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPSN-IMSVALGET 910

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           H LA  +   ++AWG+N  GQ G+ + + P   P +V GLE V    + AG  FS+A
Sbjct: 911 HGLAAGEDGALWAWGANGSGQLGEGS-TTPSPTPVRVKGLEGVA--SVSAGRAFSLA 964



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 177/368 (48%), Gaps = 31/368 (8%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRP---RLQS--LPSNIRHIEAGQFCTFLLDSTGGLLV 242
               + WG N + Q+ D   G    P   R+++  L   +R + A       L + G +  
Sbjct: 1070 GGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQA 1129

Query: 243  YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
            +G    G LG   T  +  P  V     +V++S       H L + S+G V++WG    G
Sbjct: 1130 WGDNAHGQLGDGTTERRAAPVVVRGLTGVVAVSTGAW---HSLALRSDGTVWAWGANGFG 1186

Query: 300  KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            +LG G TLS+  P  + G L  ++V  + AG  H+ AV  DG ++ WG    G+LG G  
Sbjct: 1187 QLGDGTTLSRTTPVRVAG-L--QKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTA 1243

Query: 360  KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV- 418
            +SR  P  V  LS+V +V+ G+ H+L L  DG ++ + G+   G+LG + TG     +V 
Sbjct: 1244 ESRLLPVRVEGLSNVTSVAGGDHHSLALLADG-SLGAWGNNAAGQLG-DGTGTTRYSRVW 1301

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH-TPVLVTGLSS 471
            ++ +    V +V AG + ++AL  DG V+ WG      LG    S      P  V GLS 
Sbjct: 1302 VKGVDG--VVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSG 1359

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
              +  +  G  H  A+     V+AWG N+ GQ G  + +N   +P +V  L +V V  + 
Sbjct: 1360 --VTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRA-EPLRVKELAEVSV--VS 1414

Query: 532  AGSLFSIA 539
             G+ FS+A
Sbjct: 1415 GGADFSLA 1422



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 163/371 (43%), Gaps = 38/371 (10%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
              V+ WG N   Q+ D      SR     +P+ +  ++         D++  LL  G  W
Sbjct: 819  GSVWAWGANGRGQLGDGT--TASR----VIPARVDGLQGAVAVAAGGDASLALLADGTAW 872

Query: 248  ---------LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                     LG  +T+ + +P ++ L + I+S+++    E H L    +G +++WG    
Sbjct: 873  AWGANAHGQLGDGSTSDRAVPGQLKLPSNIMSVALG---ETHGLAAGEDGALWAWGANGS 929

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G+LG G+T     P  + G L G  V  VSAG + S AV +DG  + WG    G+LG G 
Sbjct: 930  GQLGEGSTTPSPTPVRVKG-LEG--VASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGT 986

Query: 359  LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV-TTPK 417
              S+  P  VT +  V A+S G  H + L +DG  VW+ G   LG+LG   +      P+
Sbjct: 987  NHSQRVPKQVTSVKRVRAMSAGAHHVVALGEDG-AVWTWGDNTLGQLGDGTSAPTWMWPR 1045

Query: 418  VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
             +  LR   V  V AG  FSVA+   G    WG      LG   +     TPV V   +S
Sbjct: 1046 QVPELRD--VEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRL-TPVQVRIEAS 1102

Query: 472  ---HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
                 +  V     H +AL     V AWG N  GQ G D  +     P  V GL  V   
Sbjct: 1103 KLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLG-DGTTERRAAPVVVRGLTGVVA- 1160

Query: 529  QICAGSLFSIA 539
             +  G+  S+A
Sbjct: 1161 -VSTGAWHSLA 1170



 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 22/358 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D        P   +  +++  + AG F +  L   G +  +G    G
Sbjct: 121 VWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGDFHSLALRGDGTVWAWGTNFHG 180

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +T     P+ VP    +V+L+         L V  +G V +WG    G+LG G T
Sbjct: 181 QLGRGHTEPGLTPEPVPGLEGVVALA---AGFDFTLAVMDDGTVRAWGANSSGQLGDG-T 236

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            +QR   + +  + G  ++ V+AG  H+ A+ +DG ++TWG    G+LG G    R  P 
Sbjct: 237 FTQRLAPVEVAHISG--ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPA 294

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L  V AV+  ++ +L L + G +V + G+   G+LG   T    TP  +  LR   
Sbjct: 295 RVPGLERVKAVASMDASSLALLEAG-SVLAWGANGSGQLGDSGTDDRATPGEVPGLRS-- 351

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           V  V  G   ++AL  DG ++ WG GL        S     P  +  L+   +  ++ G 
Sbjct: 352 VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLA--DVASMAAGS 409

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            H LA      V++WG NT GQ G D  +       +V GL    +R + A    S+A
Sbjct: 410 FHSLAALGDGTVWSWGRNTYGQLG-DGTTAERHAAVRVEGLS--GIRGVAASGHHSLA 464



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 126/252 (50%), Gaps = 15/252 (5%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L V+  G V++WG    G+LG   T  QR     +     + +  V +G +HS A+ E
Sbjct: 60  HSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPL--PSPRDIVSVVSGEAHSLALDE 117

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            G ++ WG    G+LG G    R TP  V  L+DV AV+ G+ H+L L  DG TVW+ G+
Sbjct: 118 AGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAAGDFHSLALRGDG-TVWAWGT 176

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSIS 459
              G+LG   T    TP+ +  L    V  + AG  F++A+  DG V  WG    S  + 
Sbjct: 177 NFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMDDGTVRAWGAN-SSGQLG 233

Query: 460 FHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             T      PV V  +S   I  V+ G  H +AL +   V+ WG+N+ GQ G   +S+  
Sbjct: 234 DGTFTQRLAPVEVAHISG--ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRA 291

Query: 514 DQPSKVVGLEDV 525
             P++V GLE V
Sbjct: 292 -VPARVPGLERV 302



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 154/326 (47%), Gaps = 25/326 (7%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEA 279
           I AG   +  +  TG +  +G    G LG   T +Q L P  +P    IVS+      EA
Sbjct: 54  IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSV---VSGEA 110

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +   G V++WG    G+LG G T  +  P  +  GL    V  V+AG  HS A+  
Sbjct: 111 HSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVA-GL--TDVVAVAAGDFHSLALRG 167

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   HG+LG G  +   TP  V  L  V A++ G   TL +  DG TV + G+
Sbjct: 168 DGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDFTLAVMDDG-TVRAWGA 226

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
            + G+LG     +   P  +E      +  V AGT  +VAL  DG V+ WG      LG 
Sbjct: 227 NSSGQLGDGTFTQRLAP--VEVAHISGISAVTAGTYHAVALGKDGGVWTWGANSSGQLGD 284

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
            + S     P  V GL   ++  V+  D+  LAL +   V AWG+N  GQ G D+ ++  
Sbjct: 285 GAWS-DRAVPARVPGL--ERVKAVASMDASSLALLEAGSVLAWGANGSGQLG-DSGTDDR 340

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
             P +V GL  V    +  G+  ++A
Sbjct: 341 ATPGEVPGLRSVAA--VVGGAQHALA 364



 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 168/363 (46%), Gaps = 24/363 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+ WG N   Q+ D      +RP   S  +++  +  G   T  L   G +  +G 
Sbjct: 467 ADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGY 526

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   T  +  P RV    ++V+++         + +  +G V++WG G  G++G
Sbjct: 527 NALGQLGDGTTVDRLTPVRVARLDSVVAVAAGTYFS---MALRGDGTVWTWGEGFEGQVG 583

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G  + +  P  + G L    VT+V+AG +H+ AV  DG ++ WG+   G+LG G    R
Sbjct: 584 DGGGVQRLFPVQVAG-L--TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDR 640

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  V  L+ + AVS G SH++ L  DG +V + G    G+LG         P V+  L
Sbjct: 641 FRPVQVPGLTGITAVSGGRSHSMALHGDG-SVRAWGYNGYGQLGDGTFTSRVRPAVVPGL 699

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               ++ +       +AL  DG +  WG      LGL ++  S   PV V GL   ++  
Sbjct: 700 TG--IQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSR-PVQVRGLG--RVDR 754

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           +++G +H L +     V AWG N  GQ G D  +     P  V G+   CVR + +G L 
Sbjct: 755 LAVGRAHTLMVRPDGAVLAWGENASGQLG-DGTTTHRAGPVLVRGVP--CVRSVASGVLH 811

Query: 537 SIA 539
           S+A
Sbjct: 812 SLA 814



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
            V+ WG N   Q+ D      + P R+  L   +  I AG +    + S G +  +G    
Sbjct: 1177 VWAWGANGFGQLGDGTTLSRTTPVRVAGL-QKVVAIGAGGYHALAVRSDGSVWAWGYNAF 1235

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            G LG      + LP RV   + + S++     + H L + ++G + +WG    G+LG G 
Sbjct: 1236 GQLGDGTAESRLLPVRVEGLSNVTSVA---GGDHHSLALLADGSLGAWGNNAAGQLGDG- 1291

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD--LKSRH 363
            T + R  ++ + G+ G  V +V AG +H+ A+  DG ++TWG+  H +LG GD   ++R 
Sbjct: 1292 TGTTRYSRVWVKGVDG--VVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRI 1349

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
             P  V  LS V A+  G  H+  +   G TVW+ G  + G+LG  D      P  ++ L 
Sbjct: 1350 VPRPVPGLSGVTAIGAGARHSFAVGPKG-TVWAWGRNSHGQLGLGDNANRAEPLRVKELA 1408

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWG 450
            +  V  V  G  FS+A+  DG V  WG
Sbjct: 1409 EVSV--VSGGADFSLAMQRDGTVSSWG 1433



 Score = 88.6 bits (218), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 10/236 (4%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
              V+ WG N   Q+ D        P R++ L SN+  +  G   +  L + G L  +G  
Sbjct: 1225 GSVWAWGYNAFGQLGDGTAESRLLPVRVEGL-SNVTSVAGGDHHSLALLADGSLGAWGNN 1283

Query: 247  WLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
              G L + T      RV ++     + V +   AH L +  +G V++WG   H +LG G+
Sbjct: 1284 AAGQLGDGTGTTRYSRVWVKGVDGVVEV-RAGAAHTLALRGDGTVWTWGDNTHSQLGAGD 1342

Query: 306  TLSQRR--PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
              ++ R  P+ + G L G  VT + AG  HS AV   G ++ WG   HG+LG GD  +R 
Sbjct: 1343 DSTRTRIVPRPVPG-LSG--VTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRA 1399

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P  V EL++V  VS G   +L + +DG TV S GS   G LG    G+ ++P  +
Sbjct: 1400 EPLRVKELAEVSVVSGGADFSLAMQRDG-TVSSWGSSLHGALGLGTAGQRSSPGQV 1454



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 16/221 (7%)

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK--SRHTPTLVTELSDVGAVSCGESH 383
           +++AG  HS  V+  G ++ WG    G+LG G+     R  P  +    D+ +V  GE+H
Sbjct: 53  RIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-GEATPLQRLAPAPLPSPRDIVSVVSGEAH 111

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L + G TVW+ G  + G+LG   T    TP  +  L    V  V AG   S+AL  D
Sbjct: 112 SLALDEAG-TVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTD--VVAVAAGDFHSLALRGD 168

Query: 444 GLVFWWGLGLRSSSISFH-----TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G V+ WG          H     TP  V GL    +V ++ G    LA+     V AWG+
Sbjct: 169 GTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMDDGTVRAWGA 226

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           N+ GQ G   F+  +  P +V  +  +    + AG+  ++A
Sbjct: 227 NSSGQLGDGTFTQRL-APVEVAHISGISA--VTAGTYHAVA 264


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  146 bits (369), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 180/381 (47%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P   +L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG  +    P+ I G L G ++ 
Sbjct: 129 -CNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHGDLKS   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   TV     ++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
            S +V LT  G V+  G    G   +  S   P LV   ++S  ++ ++ G  HV  L+ 
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTS 367

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  VR I  G+ F+ A  +   +  +
Sbjct: 368 RSEVFTWGKGANGRLGHGDIED-RKVPTTVEALRDRAVRHIACGANFTAAICL---HKWV 423

Query: 550 SSAFTPLCVDVR-PHTFTLIR 569
           S A    C   R P  FT  R
Sbjct: 424 SGADQSQCSSCRQPFGFTRKR 444



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 143/325 (44%), Gaps = 77/325 (23%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +V+TWG +   ++    R     PRL +SL + NI  +  G+F T  + +TG L  +G G
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDG 156

Query: 247 -----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
                 LG        +P+R+  PLE   + ++   C   H   +TS G+++++G G  G
Sbjct: 157 THNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFGDGSFG 214

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTWGE 348
            LGHG+  S   P+ +   L G +   V+ G  H+AA+ E            G L+TWG+
Sbjct: 215 VLGHGDLKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGD 273

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS------G 400
           GD  RLGHGD ++R  PT V  L D     V+CG S T+ L+  G  VW+MG+      G
Sbjct: 274 GDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSG-KVWTMGNSVYGQLG 332

Query: 401 NL---------------------------------------------GKLGHEDTGKVTT 415
           NL                                             G+LGH D      
Sbjct: 333 NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKV 392

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P  +EALR   VR +  G +F+ A+
Sbjct: 393 PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 40.8 bits (94), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  I  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AACNIDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 181/371 (48%), Gaps = 36/371 (9%)

Query: 159 SSNSNTDIDSTSTPKLT-YNIGDTDISVAH----SKVYTWG----CNLHHQILDEVRGKC 209
           SS  NT +  +S+P+LT  N  D+  S         + TWG    C L  +     + + 
Sbjct: 556 SSGDNTLL--SSSPQLTGVNSNDSSRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQA 613

Query: 210 SRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGKG--------WLGLANTTIQPLPK 260
           +  RL +     I  I  G + +  L   G + ++G+G         LG  +   Q LP 
Sbjct: 614 TPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPT 673

Query: 261 RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           +V   + +V +S+      H   + S GE+ +WG GE G+LGHG+ L+Q  PK++   + 
Sbjct: 674 KVESLSEVVLVSIGY---YHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQT-MT 729

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVS 378
              VTQV  G  H+  +T++G ++TWG  ++G+LG GD +   TP LVT L   ++  ++
Sbjct: 730 SHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIA 789

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG +H  VL+ +   V   G+G    +G  +   ++ P ++ AL+   + ++  G   + 
Sbjct: 790 CGSTHCAVLT-NAREVLVFGNG--AAMGSANI--ISVPMMVPALKHLNIERLSCGHYSTA 844

Query: 439 ALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           ALT  G V+ WG    LG  ++    H P LV GL S  I  +S G  H+  L+   ++Y
Sbjct: 845 ALTECGDVYTWGSGQELGHGTNQSELH-PKLVDGLRSQSIRQISCGGRHMAFLTDSGKIY 903

Query: 495 AWGSNTMGQCG 505
             G +  GQ G
Sbjct: 904 TCGKDPFGQLG 914


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G+ VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 83  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 139

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 199 GRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 257

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++  
Sbjct: 258 HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 316

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 317 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 9/187 (4%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHT 384
           +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           +  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A+T +G
Sbjct: 80  VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEG 139

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++Y WG 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198

Query: 499 NTMGQCG 505
              G  G
Sbjct: 199 GRYGNLG 205



 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 196

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P+RV   A    +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERV-TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 256 LGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 373

Query: 419 IEAL 422
           IEAL
Sbjct: 374 IEAL 377


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 176/383 (45%), Gaps = 31/383 (8%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG  +      P  V    A
Sbjct: 84  KPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVE-SLA 142

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + ++    C E H   VT+ GE+Y+WG G H  G LGHG  LS   PK I G L G++V 
Sbjct: 143 VSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVA 202

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG+ +S   P  V  LS +   AV+CG  H
Sbjct: 203 YVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVACGVWH 262

Query: 384 T-----LVLSQDGH-----TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q         +++ G G+  +LGH D      P  + +L  +   ++  G
Sbjct: 263 TAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACG 322

Query: 434 TSFSVALTWDGLVFWWGLG------LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S +V LT  G V  WG+G      L +       P LV  +    +V V+ G  HV  L
Sbjct: 323 HSLTVGLTTSGQV--WGMGNTVYGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVL 380

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
           +  +EV+ WG    G+ G  +  +    P+ V  L D  VR I  G+ F+ A        
Sbjct: 381 TVKSEVFTWGKGANGRLGHGDIEDR-KIPTLVEVLRDRGVRHIACGANFTAAIC---QRK 436

Query: 548 ALSSAFTPLCVDVR-PHTFTLIR 569
            +S A    C   R P  FT  R
Sbjct: 437 WMSGAEQSQCASCRQPFGFTRKR 459



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 140/346 (40%), Gaps = 80/346 (23%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRH 223
           KL  ++   D  V H+       +V+TWG     ++    R     P L +SL  SN+  
Sbjct: 89  KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDF 148

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + + G L  +G G      LG        +PKR+        ++   C  
Sbjct: 149 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGT 208

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   +TS G+++++G G  G LGHGN  S   P+ +   L G +   V+ G  H+AAV 
Sbjct: 209 WHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVES-LSGLKTIAVACGVWHTAAVV 267

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD + R  PT V  L   D   ++CG S T+
Sbjct: 268 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTV 327

Query: 386 VLSQDGHTVWSMGS---------------------------------------------- 399
            L+  G  VW MG+                                              
Sbjct: 328 GLTTSGQ-VWGMGNTVYGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEV 386

Query: 400 -----GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                G  G+LGH D      P ++E LR   VR +  G +F+ A+
Sbjct: 387 FTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAI 432


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 158/312 (50%), Gaps = 24/312 (7%)

Query: 246 GWLGLANTTIQPLPKRV-----PLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G LGL +T   PLP  +     PL    V S+   K   +H   +  +G+VY+WG G  G
Sbjct: 10  GQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGK---SHSAVIAEDGDVYTWGRGWEG 66

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGH           I+  +  +  + V+ G +H+  VT++GL+YTWGE   G+LG GDL
Sbjct: 67  QLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDL 126

Query: 360 KSRHTPTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           KS ++P L+     L  V +++CGE HT+ +  +G T+WS G    G+LGH +T     P
Sbjct: 127 KSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEG-TIWSWGRNQCGQLGHGNTKTCYFP 185

Query: 417 -KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
            +V+   +K  +R  C G   ++ LT    ++ WG      LGL  S  +   P +V  L
Sbjct: 186 TQVVGMAKKICIRAACGG-QHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHL 244

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVVGLEDVCVR 528
                  V  G SH +AL +  ++Y WG N  GQ G  ++++ PV  P  V  L  V V+
Sbjct: 245 RRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPV--PELVTALRSVRVQ 302

Query: 529 QICAGSLFSIAY 540
           QI  G    +A+
Sbjct: 303 QIACGYDHCVAF 314



 Score =  127 bits (319), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 29/314 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLAN----TTIQPLPKRVPLEAAIVSLSVSK 275
           N+R I AG+  + ++   G +  +G+GW G       T I+  P  VP      S +V+ 
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVA- 95

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + VT  G +Y+WG  + G+LG G+  S   P LI   L    V  ++ G  H+ 
Sbjct: 96  CGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTV 155

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHT 393
           A+  +G +++WG    G+LGHG+ K+ + PT V  ++    +  +CG  HTLVL+ D + 
Sbjct: 156 AICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLT-DANK 214

Query: 394 VWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           +++ GS   G+LG   + K V  P +++ LR+     V  G S S+AL  +  ++ WG  
Sbjct: 215 IYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRN 274

Query: 451 ----LGLRSSSISFHTPV--LVTGLSSHQIVDVSIGDSHVLA---------LSQYNEVYA 495
               LGL   +   H+PV  LVT L S ++  ++ G  H +A         +     VY+
Sbjct: 275 DCGQLGLGHYT---HSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYS 331

Query: 496 WGSNTMGQCGQDNF 509
           WG    GQ G +  
Sbjct: 332 WGRGEEGQLGHNEL 345



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 15/263 (5%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMG---GLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           VYSWG  ++G+LG G+T +   P  I+     L  K V  + AG SHSA + EDG +YTW
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 347 GEGDHGRLGHGDLKSRH-TPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           G G  G+LGH  +      P +V ++ + G  AV+CG +HT+V++ +G  +++ G    G
Sbjct: 61  GRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNG-LIYTWGENKAG 119

Query: 404 KLGHEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           +LG  D     +P +I+ AL    V  +  G   +VA+  +G ++ WG      LG   +
Sbjct: 120 QLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLG-HGN 178

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           + + + P  V G++    +  + G  H L L+  N++YAWGSN  GQ G +     V QP
Sbjct: 179 TKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQP 238

Query: 517 SKVVGLEDVCVRQICAGSLFSIA 539
             V  L       +  G   S+A
Sbjct: 239 DIVDHLRRSGACHVLCGYSHSMA 261



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 19/248 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRL----QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +YTWG N   Q+        + P L     +LPS +  I  G+F T  +   G +  +G+
Sbjct: 110 IYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPS-VLSIACGEFHTVAICIEGTIWSWGR 168

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG  NT     P +V   A  + +  + C   H L +T   ++Y+WG   +G+LG
Sbjct: 169 NQCGQLGHGNTKTCYFPTQVVGMAKKICIRAA-CGGQHTLVLTDANKIYAWGSNAYGQLG 227

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              +        I+  L       V  G+SHS A+ ++  +YTWG  D G+LG G     
Sbjct: 228 LNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHS 287

Query: 363 HTPTLVTELSDVGA--VSCGESHTLVLSQDG--------HTVWSMGSGNLGKLGHEDTGK 412
             P LVT L  V    ++CG  H +    D           V+S G G  G+LGH +   
Sbjct: 288 PVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLS 347

Query: 413 VTTPKVIE 420
             TP+++E
Sbjct: 348 RCTPRIVE 355



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 101/233 (43%), Gaps = 21/233 (9%)

Query: 155 GDRKSSNSNTDIDST-STPK-LTYNIGD--TDISVAHSKVYTWGCNLHHQILDEVRGKCS 210
           GD KSSNS   IDS  + P  L+   G+  T        +++WG N   Q+       C 
Sbjct: 124 GDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCY 183

Query: 211 RP-RLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPL 264
            P ++  +   I  R    GQ  T +L     +  +G    G LGL  +    L   +  
Sbjct: 184 FPTQVVGMAKKICIRAACGGQH-TLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVD 242

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
                      C  +H + +    ++Y+WG  + G+LG G+      P+L+   L   RV
Sbjct: 243 HLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTA-LRSVRV 301

Query: 325 TQVSAGHSHSAAVTEDGL---------LYTWGEGDHGRLGHGDLKSRHTPTLV 368
            Q++ G+ H  A   D +         +Y+WG G+ G+LGH +L SR TP +V
Sbjct: 302 QQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIV 354


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 182/360 (50%), Gaps = 26/360 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N   Q+ + V    ++P   S  + I  +  G   +  + S GG+  +G   +G
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRG 491

Query: 247 WLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LG+  T      + +P++A  + S+S     ++H L +   G V++WG   +G+LG G 
Sbjct: 492 QLGIGITAT----REIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGT 547

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +  R     + GL    +T ++AG+ HS A+  DG ++ WG  D G+LG G + SR TP
Sbjct: 548 AI-DRATAAQVPGL--TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP 604

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V+ LS + AV  G +H++ +  +G TVW  G+ + G+LG         P  +  L   
Sbjct: 605 VQVSGLSAMRAVEAGPAHSVAVHLNG-TVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTG- 662

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V  V  G   S+AL  DG ++ WG      LG  +S I   TP  V GL+   ++ ++ 
Sbjct: 663 -VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQ-STPAQVPGLTG--VIALAA 718

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G+ H LAL     V+ WG+N+ GQ G D  + P   P++V GL +V    + AG+ +++A
Sbjct: 719 GNGHSLALRTDGTVWGWGANSFGQLG-DGTTTPRSTPTQVPGLTNVIA--LNAGAFYTVA 775



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
            +  V+TWG N + Q+ D       R     +P  ++I  + AG   +  L + G + V+
Sbjct: 528 GNGSVWTWGSNAYGQLGDGT--AIDRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVW 585

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G LG    T +  P +V   + + ++   +   AH + V   G V+ WG  + G+
Sbjct: 586 GSNDFGQLGDGTVTSRKTPVQV---SGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQ 642

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G   S+  P  + G L G  VT V+ G  HS A+  DG L+ WG  + G+LG+G   
Sbjct: 643 LGDGTVTSRAMPVQVSG-LTG--VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 699

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            + TP  V  L+ V A++ G  H+L L  DG TVW  G+ + G+LG   T   +TP  + 
Sbjct: 700 IQSTPAQVPGLTGVIALAAGNGHSLALRTDG-TVWGWGANSFGQLGDGTTTPRSTPTQVP 758

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  + AG  ++VAL  +  V+ WG      LG   +     TPV V+GL+   +
Sbjct: 759 GLTN--VIALNAGAFYTVALRSERSVWEWGSKSAGQLG-DGTVTQKTTPVQVSGLT--DV 813

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             ++ G++H LAL     V+AWG N  GQ G    S
Sbjct: 814 TALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTAS 849



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 171/421 (40%), Gaps = 81/421 (19%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ +      + P      +++  + A +  +  L S G +  +G    G
Sbjct: 165 VWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMAVAASEAHSLALRSDGTVWAWGDNGYG 224

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-----EAHVLTVTSEGEVYSWGVGEHGKL 301
            LG      +  P +V   A + +L+           AH L + S+G V++WG    G+L
Sbjct: 225 QLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQL 284

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +  P  ++G L    VT ++AG  HS A+ +DG ++ WG    G+LG G   +
Sbjct: 285 GDGTTTERATPVQVLG-L--TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA 341

Query: 362 RHTPTLVTELSDVGAVSCGES---------HTLVLSQDG--------------------- 391
           R TP  V  L+ V AV+ G           H+L L  DG                     
Sbjct: 342 RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATR 401

Query: 392 ----------------------------HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
                                        TVW+ G  + G+LG   T     P  +  L 
Sbjct: 402 TTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA 461

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVS 478
              +  +  G   SVA+  DG ++ WG   R       + +   PV  TGL+S  I  ++
Sbjct: 462 A--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLAS--ISALA 517

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            GDSH LAL     V+ WGSN  GQ G D  +      ++V GL D+    + AG+  S+
Sbjct: 518 AGDSHSLALRGNGSVWTWGSNAYGQLG-DGTAIDRATAAQVPGLTDITA--LAAGNHHSL 574

Query: 539 A 539
           A
Sbjct: 575 A 575



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 29/255 (11%)

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
           +VS   + H L +  +G V++WG    G+LG+G T + R   + + GL    V  V+A  
Sbjct: 148 AVSAAGD-HTLALRRDGTVWAWGFNGSGQLGNG-TATDRATPVQVPGL--TSVMAVAASE 203

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG--------ESH 383
           +HS A+  DG ++ WG+  +G+LG G    R TP  V  L+ V A++ G         +H
Sbjct: 204 AHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAH 263

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L  DG TVW+ G  + G+LG   T +  TP  ++ L    V  + AG   S+AL  D
Sbjct: 264 SLALRSDG-TVWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALRDD 320

Query: 444 GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD-------SHVLALSQY 490
           G V+ WG      LG   ++ +  TPV V GL+S   V    GD        H LAL   
Sbjct: 321 GTVWAWGNNSSGQLG-DGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD 379

Query: 491 NEVYAWGSNTMGQCG 505
             V+AWG N   Q G
Sbjct: 380 GTVWAWGYNLSRQFG 394



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 109/221 (49%), Gaps = 21/221 (9%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           VSA   H+ A+  DG ++ WG    G+LG+G    R TP  V  L+ V AV+  E+H+L 
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMAVAASEAHSLA 208

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG--------TSFSV 438
           L  DG TVW+ G    G+LG     + TTP  ++ L    V  + AG        ++ S+
Sbjct: 209 LRSDG-TVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAISAHSL 265

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           AL  DG V+ WG      LG   ++    TPV V GL+S  +  ++ G  H LAL     
Sbjct: 266 ALRSDGTVWAWGDNSAGQLG-DGTTTERATPVQVLGLTS--VTALAAGAFHSLALRDDGT 322

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           V+AWG+N+ GQ G D  +     P +V GL  V       G
Sbjct: 323 VWAWGNNSSGQLG-DGTTTARPTPVQVPGLTSVIAVAAGGG 362



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 83/178 (46%), Gaps = 23/178 (12%)

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           AVS    HTL L +DG TVW+ G    G+LG+       TP  +  L    V  V A  +
Sbjct: 148 AVSAAGDHTLALRRDG-TVWAWGFNGSGQLGNGTATDRATPVQVPGLTS--VMAVAASEA 204

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD-------- 481
            S+AL  DG V+ WG      LG   +     TPV V GL+   +  ++ G         
Sbjct: 205 HSLALRSDGTVWAWGDNGYGQLG-DGTKAQRTTPVQVLGLAG--VTALAAGGNGTTVAIS 261

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +H LAL     V+AWG N+ GQ G D  +     P +V+GL  V    + AG+  S+A
Sbjct: 262 AHSLALRSDGTVWAWGDNSAGQLG-DGTTTERATPVQVLGLTSVTA--LAAGAFHSLA 316


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 148/301 (49%), Gaps = 21/301 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIM 316
           P+ V    A  S+    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK I 
Sbjct: 329 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 388

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG- 375
           G L G  V  VS G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  LS +  
Sbjct: 389 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 448

Query: 376 -AVSCGESHT-----LVLSQDGH------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            AVSCG  HT     ++++Q          +++ G G+  +LGH D      P  + AL 
Sbjct: 449 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALI 508

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVS 478
            +   K+  G S +V LT  G VF  G  +     +  T    P LV   L+S  + ++S
Sbjct: 509 DYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEIS 568

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G  HV AL+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS ++ 
Sbjct: 569 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLED-RKVPTIVEALKDRHVKYIACGSNYTA 627

Query: 539 A 539
           A
Sbjct: 628 A 628



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 145/328 (44%), Gaps = 29/328 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
             +++TWG     ++   +      PRL +SL   S++  +  G+F T  +   G L  +
Sbjct: 304 QGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 363

Query: 244 GKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G G      LG  +     +PKR+      + ++   C   H   +TS G ++++G G  
Sbjct: 364 GDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTF 423

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTW 346
           G LGHG+  + + P+ +   L G R   VS G  H+AAV E             G L+TW
Sbjct: 424 GVLGHGDKETVQYPREVE-SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 482

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G+GD  RLGHGD   R  PT V  L D     ++CG S T+ L+  G  V++MGS   G+
Sbjct: 483 GDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQ 541

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSIS 459
           LG+  T       V + L    V ++  G     ALT    V+ WG G            
Sbjct: 542 LGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLED 601

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              P +V  L    +  ++ G ++  A+
Sbjct: 602 RKVPTIVEALKDRHVKYIACGSNYTAAI 629


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 182/360 (50%), Gaps = 26/360 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N   Q+ + V    ++P   S  + I  +  G   +  + S GG+  +G   +G
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRG 490

Query: 247 WLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LG+  T      + +P++A  + S+S     ++H L +   G V++WG   +G+LG G 
Sbjct: 491 QLGIGITAT----REIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGT 546

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +  R     + GL    +T ++AG+ HS A+  DG ++ WG  D G+LG G + SR TP
Sbjct: 547 AI-DRATAAQVPGL--TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTP 603

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V+ LS + AV  G +H++ +  +G TVW  G+ + G+LG         P  +  L   
Sbjct: 604 VQVSGLSAMRAVEAGPAHSVAVHLNG-TVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTG- 661

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V  V  G   S+AL  DG ++ WG      LG  +S I   TP  V GL+   ++ ++ 
Sbjct: 662 -VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQ-STPAQVPGLTG--VIALAA 717

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G+ H LAL     V+ WG+N+ GQ G D  + P   P++V GL +V    + AG+ +++A
Sbjct: 718 GNGHSLALRTDGTVWGWGANSFGQLG-DGTTTPRSTPTQVPGLTNVIA--LNAGAFYTVA 774



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 163/336 (48%), Gaps = 25/336 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
            +  V+TWG N + Q+ D       R     +P  ++I  + AG   +  L + G + V+
Sbjct: 527 GNGSVWTWGSNAYGQLGDGT--AIDRATAAQVPGLTDITALAAGNHHSLALRNDGTVWVW 584

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G LG    T +  P +V   + + ++   +   AH + V   G V+ WG  + G+
Sbjct: 585 GSNDFGQLGDGTVTSRKTPVQV---SGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQ 641

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G   S+  P  + G L G  VT V+ G  HS A+  DG L+ WG  + G+LG+G   
Sbjct: 642 LGDGTVTSRAMPVQVSG-LTG--VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 698

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            + TP  V  L+ V A++ G  H+L L  DG TVW  G+ + G+LG   T   +TP  + 
Sbjct: 699 IQSTPAQVPGLTGVIALAAGNGHSLALRTDG-TVWGWGANSFGQLGDGTTTPRSTPTQVP 757

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  + AG  ++VAL  +  V+ WG      LG   +     TPV V+GL+   +
Sbjct: 758 GLTN--VIALNAGAFYTVALRSERSVWEWGSKSAGQLG-DGTVTQKTTPVQVSGLT--DV 812

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             ++ G++H LAL     V+AWG N  GQ G    S
Sbjct: 813 TALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTAS 848



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 171/421 (40%), Gaps = 81/421 (19%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ +      + P      +++  + A +  +  L S G +  +G    G
Sbjct: 164 VWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMAVAASEAHSLALRSDGTVWAWGDNGYG 223

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-----EAHVLTVTSEGEVYSWGVGEHGKL 301
            LG      +  P +V   A + +L+           AH L + S+G V++WG    G+L
Sbjct: 224 QLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQL 283

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +  P  ++G L    VT ++AG  HS A+ +DG ++ WG    G+LG G   +
Sbjct: 284 GDGTTTERATPVQVLG-L--TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTA 340

Query: 362 RHTPTLVTELSDVGAVSCGES---------HTLVLSQDG--------------------- 391
           R TP  V  L+ V AV+ G           H+L L  DG                     
Sbjct: 341 RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATR 400

Query: 392 ----------------------------HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
                                        TVW+ G  + G+LG   T     P  +  L 
Sbjct: 401 TTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA 460

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVS 478
              +  +  G   SVA+  DG ++ WG   R       + +   PV  TGL+S  I  ++
Sbjct: 461 A--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGLAS--ISALA 516

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            GDSH LAL     V+ WGSN  GQ G D  +      ++V GL D+    + AG+  S+
Sbjct: 517 AGDSHSLALRGNGSVWTWGSNAYGQLG-DGTAIDRATAAQVPGLTDITA--LAAGNHHSL 573

Query: 539 A 539
           A
Sbjct: 574 A 574



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 29/255 (11%)

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
           +VS   + H L +  +G V++WG    G+LG+G T + R   + + GL    V  V+A  
Sbjct: 147 AVSAAGD-HTLALRRDGTVWAWGFNGSGQLGNG-TATDRATPVQVPGL--TSVMAVAASE 202

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG--------ESH 383
           +HS A+  DG ++ WG+  +G+LG G    R TP  V  L+ V A++ G         +H
Sbjct: 203 AHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAH 262

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L  DG TVW+ G  + G+LG   T +  TP  ++ L    V  + AG   S+AL  D
Sbjct: 263 SLALRSDG-TVWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALRDD 319

Query: 444 GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD-------SHVLALSQY 490
           G V+ WG      LG   ++ +  TPV V GL+S   V    GD        H LAL   
Sbjct: 320 GTVWAWGNNSSGQLG-DGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSD 378

Query: 491 NEVYAWGSNTMGQCG 505
             V+AWG N   Q G
Sbjct: 379 GTVWAWGYNLSRQFG 393



 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 109/221 (49%), Gaps = 21/221 (9%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           VSA   H+ A+  DG ++ WG    G+LG+G    R TP  V  L+ V AV+  E+H+L 
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMAVAASEAHSLA 207

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG--------TSFSV 438
           L  DG TVW+ G    G+LG     + TTP  ++ L    V  + AG        ++ S+
Sbjct: 208 LRSDG-TVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVAISAHSL 264

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           AL  DG V+ WG      LG   ++    TPV V GL+S  +  ++ G  H LAL     
Sbjct: 265 ALRSDGTVWAWGDNSAGQLG-DGTTTERATPVQVLGLTS--VTALAAGAFHSLALRDDGT 321

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           V+AWG+N+ GQ G D  +     P +V GL  V       G
Sbjct: 322 VWAWGNNSSGQLG-DGTTTARPTPVQVPGLTSVIAVAAGGG 361



 Score = 63.2 bits (152), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 83/178 (46%), Gaps = 23/178 (12%)

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           AVS    HTL L +DG TVW+ G    G+LG+       TP  +  L    V  V A  +
Sbjct: 147 AVSAAGDHTLALRRDG-TVWAWGFNGSGQLGNGTATDRATPVQVPGLTS--VMAVAASEA 203

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD-------- 481
            S+AL  DG V+ WG      LG   +     TPV V GL+   +  ++ G         
Sbjct: 204 HSLALRSDGTVWAWGDNGYGQLG-DGTKAQRTTPVQVLGLAG--VTALAAGGNGTTVAIS 260

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +H LAL     V+AWG N+ GQ G D  +     P +V+GL  V    + AG+  S+A
Sbjct: 261 AHSLALRSDGTVWAWGDNSAGQLG-DGTTTERATPVQVLGLTSVTA--LAAGAFHSLA 315


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 148/301 (49%), Gaps = 21/301 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIM 316
           P+ V    A  S+    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK I 
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG- 375
           G L G  V  VS G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  LS +  
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 376 -AVSCGESHT-----LVLSQDGH------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            AVSCG  HT     ++++Q          +++ G G+  +LGH D      P  + AL 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALI 503

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVS 478
            +   K+  G S +V LT  G VF  G  +     +  T    P LV   L+S  + ++S
Sbjct: 504 DYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEIS 563

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G  HV AL+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS ++ 
Sbjct: 564 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLED-RKVPTIVEALKDRHVKYIACGSNYTA 622

Query: 539 A 539
           A
Sbjct: 623 A 623



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 145/328 (44%), Gaps = 29/328 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
             +++TWG     ++   +      PRL +SL   S++  +  G+F T  +   G L  +
Sbjct: 299 QGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 358

Query: 244 GKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G G      LG  +     +PKR+      + ++   C   H   +TS G ++++G G  
Sbjct: 359 GDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTF 418

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTW 346
           G LGHG+  + + P+ +   L G R   VS G  H+AAV E             G L+TW
Sbjct: 419 GVLGHGDKETVQYPREVE-SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 477

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G+GD  RLGHGD   R  PT V  L D     ++CG S T+ L+  G  V++MGS   G+
Sbjct: 478 GDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQ 536

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSIS 459
           LG+  T       V + L    V ++  G     ALT    V+ WG G            
Sbjct: 537 LGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLED 596

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              P +V  L    +  ++ G ++  A+
Sbjct: 597 RKVPTIVEALKDRHVKYIACGSNYTAAI 624


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 148/301 (49%), Gaps = 21/301 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIM 316
           P+ V    A  S+    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK I 
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG- 375
           G L G  V  VS G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  LS +  
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 376 -AVSCGESHT-----LVLSQDGH------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            AVSCG  HT     ++++Q          +++ G G+  +LGH D      P  + AL 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALI 503

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVS 478
            +   K+  G S +V LT  G VF  G  +     +  T    P LV   L+S  + ++S
Sbjct: 504 DYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEIS 563

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G  HV AL+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS ++ 
Sbjct: 564 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLED-RKVPTIVEALKDRHVKYIACGSNYTA 622

Query: 539 A 539
           A
Sbjct: 623 A 623



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 145/328 (44%), Gaps = 29/328 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
             +++TWG     ++   +      PRL +SL   S++  +  G+F T  +   G L  +
Sbjct: 299 QGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 358

Query: 244 GKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G G      LG  +     +PKR+      + ++   C   H   +TS G ++++G G  
Sbjct: 359 GDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTF 418

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTW 346
           G LGHG+  + + P+ +   L G R   VS G  H+AAV E             G L+TW
Sbjct: 419 GVLGHGDKETVQYPREVE-SLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 477

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G+GD  RLGHGD   R  PT V  L D     ++CG S T+ L+  G  V++MGS   G+
Sbjct: 478 GDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQ 536

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSIS 459
           LG+  T       V + L    V ++  G     ALT    V+ WG G            
Sbjct: 537 LGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLED 596

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              P +V  L    +  ++ G ++  A+
Sbjct: 597 RKVPTIVEALKDRHVKYIACGSNYTAAI 624


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G+ VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 83  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 139

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 199 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 257

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++  
Sbjct: 258 HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 316

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 317 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+C
Sbjct: 15  RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 194 YGWGWGRYGNLG 205



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 196

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL + T + +P+RV        +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGG-EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 256 LGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 373

Query: 419 IEAL 422
           IEAL
Sbjct: 374 IEAL 377


>gi|302760239|ref|XP_002963542.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
 gi|300168810|gb|EFJ35413.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
          Length = 360

 Score =  145 bits (367), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 108/306 (35%), Positives = 151/306 (49%), Gaps = 21/306 (6%)

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           +G LGL       LP+ +     I+ ++   C  AH   +   G V +WG G  G  G  
Sbjct: 11  QGQLGLGTMIDALLPQAMDPPLRILDMA---CGGAHAAAILDGGRVATWGRGLIGHEGDS 67

Query: 305 NTLSQRRPKLIMGGLY--GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              +     +     +  G RV +V+AG +H+A VTE G L+T G+G  G+LGHGD  SR
Sbjct: 68  EKDAAAVVAVPSVVEFFGGHRVCEVAAGWNHTAFVTESGELFTCGDGAFGQLGHGDFVSR 127

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG---SGNLGKLGHEDTGKVTTPKVI 419
            TP  V  LS+   V+CG  HTLVLS DG  V + G    G LG L  ++  KV +P+ I
Sbjct: 128 GTPCKVLALSNAFKVACGMRHTLVLSGDGRVVKAFGLAKRGQLGSLSSKELNKVASPQAI 187

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVT-GLSSHQIVDVS 478
            +L  + V  V A    S AL+  G ++ WG      S ++  P L +  L  H+   VS
Sbjct: 188 PSLDSYSVSIVAANGDHSAALSGSGQLYLWGKAFDDQSGAY-VPFLASEELKFHR---VS 243

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS-----KVVGLEDVCVRQICAG 533
           +G +H L L++  E  +WG+N  GQ G    S  + + S     +V GLE   V  I AG
Sbjct: 244 LGWNHGLGLTEDGEAISWGTNRHGQLGS---SRCISERSNIKFYRVQGLEKHRVVSISAG 300

Query: 534 SLFSIA 539
           S  S A
Sbjct: 301 SEHSAA 306



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 90/195 (46%), Gaps = 11/195 (5%)

Query: 196 NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTI 255
           +L  + L++V    + P L S   +I  + A    +  L  +G L ++GK +   +   +
Sbjct: 172 SLSSKELNKVASPQAIPSLDSYSVSI--VAANGDHSAALSGSGQLYLWGKAFDDQSGAYV 229

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
            P      L+   VSL  +     H L +T +GE  SWG   HG+LG    +S+R     
Sbjct: 230 -PFLASEELKFHRVSLGWN-----HGLGLTEDGEAISWGTNRHGQLGSSRCISERSNIKF 283

Query: 316 --MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELS 372
             + GL   RV  +SAG  HSAAV   G LYTWG G+HG+LG G +   RH   +V    
Sbjct: 284 YRVQGLEKHRVVSISAGSEHSAAVDAAGDLYTWGWGEHGQLGLGHVNDERHPCRVVVGQC 343

Query: 373 DVGAVSCGESHTLVL 387
               V CG   T   
Sbjct: 344 QRSRVCCGSGFTFAF 358


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  145 bits (366), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 155/318 (48%), Gaps = 14/318 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           VYTWG     ++     G    PRL  SL    I H+  G + T  + S G L  +G G 
Sbjct: 28  VYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGM 87

Query: 248 ---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
              LG  N +    PKRV     +  + ++ C   H   VTS G +Y+WG  E+G  GHG
Sbjct: 88  YGKLGHGNESGHSTPKRVDSLVGLAVVDIA-CGSRHTAIVTSRGCLYTWGDKENGVAGHG 146

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +T   +    ++  L GKRV Q+SA   H+  +T+ G +YTWGEG  GRLGHG  ++ H+
Sbjct: 147 DTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHS 206

Query: 365 PTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P LV  L     V  SCG  H+ V++ DG  +++ G G  G+LGH D      P +++ L
Sbjct: 207 PRLVETLLGKRPVQISCGGFHSAVVTADG-KMYTFGGGEHGQLGHGDKVNKVKPTLVKDL 265

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDV 477
               + ++  G S SVALT    V+ WG G              TP LV  L   ++V V
Sbjct: 266 DGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCV 325

Query: 478 SIGDSHVLALSQYNEVYA 495
           +  + H   L + + V A
Sbjct: 326 ASYNEHTACLVEPHSVNA 343



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 152/305 (49%), Gaps = 20/305 (6%)

Query: 238 GGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           GG+  +G+G    LG  +   + +P+     A  V   V+ C   H   V+S+G +++WG
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVT-CGSYHTAAVSSKGNLFTWG 84

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G +GKLGHGN      PK +   L G  V  ++ G  H+A VT  G LYTWG+ ++G  
Sbjct: 85  GGMYGKLGHGNESGHSTPKRV-DSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVA 143

Query: 355 GHGDLKS-RHTPTLVTELSDVGAV---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           GHGD +  ++TP L+  LS    V   +CG  HT  L+  G  V++ G G  G+LGH   
Sbjct: 144 GHGDTEGHQYTPKLLERLSGKRVVQLSACG-FHTGCLTDAG-EVYTWGEGKFGRLGHGAE 201

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVL 465
               +P+++E L   R  ++  G   S  +T DG ++ +G G          ++   P L
Sbjct: 202 RNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTL 261

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP---SKVVGL 522
           V  L    +  ++ G SH +AL+  +EVY WG+   G+ G       V  P    K+VG 
Sbjct: 262 VKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH-GCGKKVSTPQLVEKLVGQ 320

Query: 523 EDVCV 527
           + VCV
Sbjct: 321 KVVCV 325



 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 137/265 (51%), Gaps = 11/265 (4%)

Query: 285 TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           T  G VY+WG G+ G+LGHG+   +  P+L    L G+ +T V+ G  H+AAV+  G L+
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTH-SLAGQVITHVTCGSYHTAAVSSKGNLF 81

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG G +G+LGHG+     TP  V  L  +  V  +CG  HT +++  G  +++ G    
Sbjct: 82  TWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRG-CLYTWGDKEN 140

Query: 403 GKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSS 456
           G  GH DT G   TPK++E L   RV ++ A    +  LT  G V+ WG G        +
Sbjct: 141 GVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGA 200

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             + H+P LV  L   + V +S G  H   ++   ++Y +G    GQ G  +  N V +P
Sbjct: 201 ERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKV-KP 259

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           + V  L+ V + QI  G   S+A T
Sbjct: 260 TLVKDLDGVFLTQITCGWSHSVALT 284



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 7/157 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
            +VYTWG     ++       C  PRL    L      I  G F + ++ + G +  +G 
Sbjct: 183 GEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGG 242

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG  +   +  P  V  +   V L+   C  +H + +TS  EVY+WG G+HGKLG
Sbjct: 243 GEHGQLGHGDKVNKVKPTLVK-DLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG 301

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           HG       P+L+   L G++V  V++ + H+A + E
Sbjct: 302 HGCGKKVSTPQLVE-KLVGQKVVCVASYNEHTACLVE 337


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  145 bits (366), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 183/383 (47%), Gaps = 31/383 (8%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P   +L  ++ H++ G     L+  +G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG  +    P+ I G L G +V 
Sbjct: 129 -CNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG++KS   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   TV     ++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLV-TGLSSHQIVDVSIGDSHVLALSQ 489
            S +V LT  G V+  G    G   +  S   P LV   +++  ++ V+ G  HV  L+ 
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKITNEHVLQVACGSYHVSVLTS 367

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
            +EV+ WG    G+ G  +     DQ  P+ V  L+D  VR I  G+ F+ A  +   + 
Sbjct: 368 RSEVFTWGKGANGRLGHGDIE---DQKVPTLVEALKDRSVRHIACGANFTAAICL---HK 421

Query: 548 ALSSAFTPLCVDVR-PHTFTLIR 569
            +S A    C   R P  FT  R
Sbjct: 422 WVSGADQSQCSSCRQPFGFTRKR 444



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 139/323 (43%), Gaps = 73/323 (22%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +V+TWG +   ++    R     PRL +SL + NI  +  G+F T  + +TG L  +G G
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDG 156

Query: 247 -----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
                 LG        +P+R+      + ++   C   H   +TS G+++++G G  G L
Sbjct: 157 THNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVL 216

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTWGEGD 350
           GHGN  S   P+ +   L G +   V+ G  H+AA+ E            G L+TWG+GD
Sbjct: 217 GHGNVKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGD 275

Query: 351 HGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS--------- 399
             RLGHGD ++R  PT V  L D     V+CG S T+ L+  G  VW+MG+         
Sbjct: 276 KHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLTTSG-KVWTMGNSVYGQLGNP 334

Query: 400 ------------------------------------------GNLGKLGHEDTGKVTTPK 417
                                                     G  G+LGH D      P 
Sbjct: 335 NSDGRPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPT 394

Query: 418 VIEALRKFRVRKVCAGTSFSVAL 440
           ++EAL+   VR +  G +F+ A+
Sbjct: 395 LVEALKDRSVRHIACGANFTAAI 417


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/284 (35%), Positives = 152/284 (53%), Gaps = 20/284 (7%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYS 292
           L +Y  GW     LG  N++   +P   P++A +  L + +  C ++H L VT++GEVYS
Sbjct: 77  LTIYSWGWGDFGRLGHGNSSDLFVPH--PIKA-LQGLEIRQIACGDSHCLAVTADGEVYS 133

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G+T     P  ++    G  V  ++AG  H+AAVT+ G LY WG G +G
Sbjct: 134 WGRNQNGQLGLGDTDDSLVPHKLLA-FEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYG 192

Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  V  + D  +  V+CG  HT+ +SQ G  +++ G    G+LGH D 
Sbjct: 193 NLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSG-KLYTYGWSKYGQLGHGDY 251

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVL 465
                P  + AL +F + +V  G   +VALT  G ++ WG      + S  +  HT P L
Sbjct: 252 ADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQL 311

Query: 466 VTGLSSHQ-IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           ++    HQ +V VS G  H +A++  N VY+WG  T GQ G  +
Sbjct: 312 ISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 13/272 (4%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H + + S   V S+G GE G+LGHG+   +  P++I G L    ++ V+ G  H+ A +
Sbjct: 15  SHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRII-GALNDCEISLVACGADHTTAYS 73

Query: 339 EDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
              L +Y+WG GD GRLGHG+      P  +  L   ++  ++CG+SH L ++ DG  V+
Sbjct: 74  ATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGE-VY 132

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
           S G    G+LG  DT     P  + A     V+ + AG   + A+T  G ++ WG G R 
Sbjct: 133 SWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWG-RY 191

Query: 456 SSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            ++          P  V  +   ++  V+ G  H +A+SQ  ++Y +G +  GQ G  ++
Sbjct: 192 GNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDY 251

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++ +  P +V  L +  + Q+  G   ++A T
Sbjct: 252 ADHL-LPHQVAALAEFNITQVSGGWRHTVALT 282



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 15/247 (6%)

Query: 186 AHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           A  +VY+WG N + Q+ L +        +L +    +++ + AG   T  +  +G L  Y
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKL--Y 184

Query: 244 GKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G GW     LGL +   + LP  VP       + +  C   H + V+  G++Y++G  ++
Sbjct: 185 GWGWGRYGNLGLGDRGDRMLPAEVP-AVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LGHG+      P  +   L    +TQVS G  H+ A+TE G LY WG    G++G GD
Sbjct: 244 GQLGHGDYADHLLPHQVAA-LAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD 302

Query: 359 LKSRHTPTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
           +    +P L++   +   V  VSCG  HT+ ++ D + V+S G G  G+LGH D    + 
Sbjct: 303 VDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVT-DKNNVYSWGRGTSGQLGHGDAVDRSA 361

Query: 416 PKVIEAL 422
           PK I+AL
Sbjct: 362 PKGIQAL 368



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 18/219 (8%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           ++V  VSAG SH+ A+    ++ ++G G+ G+LGHGD + R  P ++  L+D  +  V+C
Sbjct: 5   RKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVAC 64

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S    T++S G G+ G+LGH ++  +  P  I+AL+   +R++  G S  +A
Sbjct: 65  GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLA 124

Query: 440 LTWDGLVFWW--------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +T DG V+ W        GLG    S+  H  +   G+S   +  ++ G  H  A++   
Sbjct: 125 VTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS---VKMLAAGAEHTAAVTDSG 181

Query: 492 EVYAWGSNTMGQCGQDNFSN---PVDQPSKVVGLEDVCV 527
           ++Y WG    G  G  +  +   P + P+  VG E +C+
Sbjct: 182 KLYGWGWGRYGNLGLGDRGDRMLPAEVPA--VGDEKMCM 218



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFC--------TFLLDSTGG 239
            K+Y WG   +  +    RG       + LP+ +  +   + C        T  +  +G 
Sbjct: 181 GKLYGWGWGRYGNLGLGDRGD------RMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234

Query: 240 LLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWG 294
           L  YG    G LG  +     LP +V   AA+   ++++ S    H + +T  G++Y WG
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQV---AALAEFNITQVSGGWRHTVALTEAGKLYGWG 291

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             + G++G G+      P+LI      +RV QVS G  H+ AVT+   +Y+WG G  G+L
Sbjct: 292 WNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQL 351

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCG 380
           GHGD   R  P  +  LS  G+   G
Sbjct: 352 GHGDAVDRSAPKGIQALSADGSACEG 377


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G+ VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 84  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 140

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG 
Sbjct: 141 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 199

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 200 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 258

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++  
Sbjct: 259 HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 317

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 318 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 362



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+C
Sbjct: 16  RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 75

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 76  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 135

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++
Sbjct: 136 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 194

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 195 YGWGWGRYGNLG 206



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 140 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 197

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL + T + +P+RV        +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTSTGG-EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 256

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 257 LGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 316 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 374

Query: 419 IEAL 422
           IEAL
Sbjct: 375 IEAL 378


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 175/374 (46%), Gaps = 30/374 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEA-AIVSLSVSK 275
           ++ HI  G     L+   G +  +G    G LG         PK V  EA A  +     
Sbjct: 308 DVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLV--EALATTNTEFVA 365

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++++WG G H  G LGHGN +S   PK + G L G RV+ V+ G  H
Sbjct: 366 CGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGIRVSSVACGVWH 425

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL---- 387
           +A VT  G L+T+G+G  G LGHGD +S   P  V  L  +    V+CG  HT  +    
Sbjct: 426 TALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVWHTAAVVEVM 485

Query: 388 ---SQDGHT---VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
              S  G +   +++ G G+ G+LGH D  +   P  + AL  +  ++V  G + +VALT
Sbjct: 486 VGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALT 545

Query: 442 WDGLVFWWGLGLRSS----SISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            +G VF  G  L             P LV G L    + +++ G  HV  L+   EVY W
Sbjct: 546 INGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTW 605

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G  +  +  + P+ V  L++  V+ +  GS F+ A  +   +  +S A   L
Sbjct: 606 GKGANGRLGHGDVMD-RNTPTLVEALKEKQVKSVACGSGFTAAICL---HKWVSGADQSL 661

Query: 557 CVDVR-PHTFTLIR 569
           C   R P  FT  R
Sbjct: 662 CSGCRQPFGFTRKR 675


>gi|302799553|ref|XP_002981535.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
 gi|300150701|gb|EFJ17350.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
          Length = 360

 Score =  145 bits (365), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 108/306 (35%), Positives = 151/306 (49%), Gaps = 21/306 (6%)

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           +G LGL       LP+ +     I+ ++   C  AH   +   G V +WG G  G  G  
Sbjct: 11  QGQLGLGTMIDALLPQAMDPPLRILDMA---CGGAHAAAILDGGRVATWGRGLIGHEGDS 67

Query: 305 NTLSQRRPKLIMGGLY--GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              +     +     +  G RV +V+AG +H+A VTE G L+T G+G  G+LGHGD  SR
Sbjct: 68  EKDAAAVVAVPSVVEFFGGHRVCEVAAGWNHTAFVTESGELFTCGDGAFGQLGHGDFVSR 127

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG---SGNLGKLGHEDTGKVTTPKVI 419
            TP  V  LS+   V+CG  HTLVLS DG  V + G    G LG L  ++  KV +P+ I
Sbjct: 128 GTPCKVLALSNAFKVACGMRHTLVLSGDGRVVKAFGLAKRGQLGSLSSKELNKVASPQAI 187

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVT-GLSSHQIVDVS 478
            +L  + V  V A    S AL+  G ++ WG      S ++  P L +  L  H+   VS
Sbjct: 188 PSLDSYGVSIVAANGDHSAALSGSGQLYLWGKAFDDQSGAY-VPFLASEELKFHR---VS 243

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS-----KVVGLEDVCVRQICAG 533
           +G +H L L++  E  +WG+N  GQ G    S  + + S     +V GLE   V  I AG
Sbjct: 244 LGWNHGLGLTEDGEAISWGTNRHGQLGS---SRCISERSNIKFYRVQGLEKHRVVSISAG 300

Query: 534 SLFSIA 539
           S  S A
Sbjct: 301 SEHSAA 306



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/157 (35%), Positives = 74/157 (47%), Gaps = 9/157 (5%)

Query: 234 LDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           L  +G L ++GK +   +   + P      L+   VSL  +     H L +T +GE  SW
Sbjct: 208 LSGSGQLYLWGKAFDDQSGAYV-PFLASEELKFHRVSLGWN-----HGLGLTEDGEAISW 261

Query: 294 GVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           G   HG+LG    +S+R       + GL   RV  +SAG  HSAAV   G LYTWG G+H
Sbjct: 262 GTNRHGQLGSSRCISERSNIKFYRVQGLEKHRVVSISAGSEHSAAVDAAGDLYTWGWGEH 321

Query: 352 GRLGHGDLK-SRHTPTLVTELSDVGAVSCGESHTLVL 387
           G+LG G +   RH   +V        V CG   T   
Sbjct: 322 GQLGLGHVNDERHPCRVVVGQCQRSRVCCGSGFTFAF 358


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G+ VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 72  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 128

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG 
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 187

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 188 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 246

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++  
Sbjct: 247 HGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 305

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 306 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  110 bits (276), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+C
Sbjct: 4   RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 63

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 123

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++
Sbjct: 124 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 182

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 183 YGWGWGRYGNLG 194



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 128 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 185

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL + T + +P+RV        +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTSTGG-EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 244

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 245 LGHGDLEDHLIPHKLEA-LSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 304 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 362

Query: 419 IEAL 422
           IEAL
Sbjct: 363 IEAL 366


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 148/301 (49%), Gaps = 21/301 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIM 316
           P+ V    A  S+    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK I 
Sbjct: 324 PRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIA 383

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG- 375
           G L G  V  V+ G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  LS +  
Sbjct: 384 GCLEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRT 443

Query: 376 -AVSCGESHT-----LVLSQDGH------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            AVSCG  HT     ++++Q          +++ G G+  +LGH D      P  + AL 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALI 503

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVS 478
            +   K+  G S +V LT  G VF  G  +     +  T    P LV   L+S  + ++S
Sbjct: 504 DYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEIS 563

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G  HV AL+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS ++ 
Sbjct: 564 CGAYHVAALTSRNEVYTWGKGANGRLGHGDLED-RKVPTLVEALKDRHVKYIACGSNYTA 622

Query: 539 A 539
           A
Sbjct: 623 A 623



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 138/328 (42%), Gaps = 76/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
             +++TWG     ++   +      PRL +SL   S++  +  G+F T  +   G L  +
Sbjct: 299 QGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTW 358

Query: 244 GKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G G      LG  +     +PKR+      + ++   C   H   +TS G ++++G G  
Sbjct: 359 GDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHTALITSYGRLFTFGDGTF 418

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTW 346
           G LGHG+  + + P+ +   L G R   VS G  H+AAV E             G L+TW
Sbjct: 419 GVLGHGDRETVQYPREVES-LSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTW 477

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS----- 399
           G+GD  RLGHGD   R  PT V  L D     ++CG S T+ L+  G  V++MGS     
Sbjct: 478 GDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQ-VFTMGSTVYGQ 536

Query: 400 -GNL----------------------------------------------GKLGHEDTGK 412
            GNL                                              G+LGH D   
Sbjct: 537 LGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLED 596

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              P ++EAL+   V+ +  G++++ A+
Sbjct: 597 RKVPTLVEALKDRHVKYIACGSNYTAAI 624



 Score = 41.6 bits (96), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
           V  PK +E+     V ++  G   +  +T  G +F WG      LG       FH P LV
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFH-PRLV 327

Query: 467 TGLSSHQIVD-VSIGDSHVLALSQYNEVYAWGSNT 500
             L++   VD V+ G+ H  A++   E+Y WG  T
Sbjct: 328 ESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGT 362


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  144 bits (364), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G+ VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 72  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 128

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG 
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 187

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 188 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 246

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++  
Sbjct: 247 HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 305

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 306 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  110 bits (275), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+C
Sbjct: 4   RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 63

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 123

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++
Sbjct: 124 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 182

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 183 YGWGWGRYGNLG 194



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 128 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 185

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL + T + +P+RV        +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTSTGG-EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 244

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 245 LGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 304 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 362

Query: 419 IEAL 422
           IEAL
Sbjct: 363 IEAL 366


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  144 bits (364), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 153/324 (47%), Gaps = 25/324 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A  +  V  C E H   VT  G++YSWG G H  G LGHGN +S   PK + G L G RV
Sbjct: 362 ASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGLRV 421

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGES 382
             ++ G  H+A VT  GLL+T+G+G  G LGH D KS ++P  V  L  +  V  +CG  
Sbjct: 422 ASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGVW 481

Query: 383 HTLVLSQ-----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           HT  + +               +++ G G  G+LGH D  +   P  + AL     R+V 
Sbjct: 482 HTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVA 541

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +VALT  G VF  G      L         P LV G L    + D++ G  HV  
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKLPGLVEGKLVEAYVEDIACGAHHVAV 601

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           L+  +EVY WG    G+ G  +  +  + P+ V  L++  V+ I  G+ F+ A  +   +
Sbjct: 602 LTHNSEVYTWGKGANGRLGHGDLED-RNTPTLVEALKEKQVKSIACGATFTAAICL---H 657

Query: 547 SALSSAFTPLCVDVR-PHTFTLIR 569
             LS A    C   + P  FT  R
Sbjct: 658 KWLSGADQNACSGCKQPFGFTRKR 681



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 143/329 (43%), Gaps = 79/329 (24%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSNIRHIEA-GQFCTFLLDSTGGLLVYG 244
             +V+TWG     ++   V    S P+L ++L S+   + A G++    +  +G L  +G
Sbjct: 330 QGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWG 389

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   V+ S++ C   H   VT+ G ++++G G 
Sbjct: 390 DGTHNLGLLGHGNDISHWIPKRVNGPLEGLRVA-SIA-CGPWHTALVTTTGLLFTFGDGT 447

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGH +  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 448 FGVLGHNDRKSAYSPREVES-LKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFT 506

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVT-----------------------------------E 370
           WG+G+ GRLGHGD + R  PT V                                    +
Sbjct: 507 WGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVACGYSLTVALTTKGGVFTMGSSTYGQ 566

Query: 371 LSDVGA-------------------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           L D  A                   ++CG  H  VL+ +   V++ G G  G+LGH D  
Sbjct: 567 LGDPQADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSE-VYTWGKGANGRLGHGDLE 625

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              TP ++EAL++ +V+ +  G +F+ A+
Sbjct: 626 DRNTPTLVEALKEKQVKSIACGATFTAAI 654


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  144 bits (363), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 159/329 (48%), Gaps = 17/329 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V TWG N+H Q+ D        P      +N+  I  G + +  L S G +  +G  W G
Sbjct: 79  VLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTAIAGGAWHSVALTSDGTVWTWGSNWAG 138

Query: 250 -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            L + T +   K V +   + +++       H L + S+G V++WG   +G+LG G T  
Sbjct: 139 QLGDGTTKSRNKPVQVNN-LKNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTD 197

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           +  P   +       +  ++ G  HS A   DG ++TWG   +G+LG G + +R  P LV
Sbjct: 198 RNTP---VQTRSLNTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLV 254

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
             + DV  + CG  H++VL  +G T+W  G    G+LG   T   +TP  +  L+   + 
Sbjct: 255 NGIKDVSMIRCGGDHSIVLKNNG-TIWIWGFNQHGQLGDRSTDNRSTPVPMGDLKN--IM 311

Query: 429 KVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
            +  G   S+ L  DG V+ WG      LG   +++S  TP+  + LS+  +  ++ G+ 
Sbjct: 312 TIDGGGDHSLILKSDGTVWTWGNNENGQLG-DGTTMSRATPIQASTLSN--VTAIASGEQ 368

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           H +AL     ++AWGSN  GQ G  + SN
Sbjct: 369 HSIALKSDGTIWAWGSNRNGQLGDGSISN 397



 Score =  124 bits (312), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 92/264 (34%), Positives = 129/264 (48%), Gaps = 24/264 (9%)

Query: 261 RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           R+P+ A+ + L VS  S  H + + S+G V +WG   HG+LG G    ++ P  +     
Sbjct: 52  RIPIFASTI-LQVSGGS-FHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKD--- 106

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG 380
              VT ++ G  HS A+T DG ++TWG    G+LG G  KSR+ P  V  L ++ A++  
Sbjct: 107 LNNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITAIASK 166

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             H L L  DG TVW+ G    G+LG   T    TP    +L    +  +  G   S+A 
Sbjct: 167 GLHNLALKSDG-TVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNT--IISIAGGGYHSLAQ 223

Query: 441 TWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSI---GDSHVLALSQYNE 492
             DG ++ WGL     L   +I+  T PVLV G     I DVS+   G  H + L     
Sbjct: 224 KADGTIWTWGLNQYGQLGDGTITNRTIPVLVNG-----IKDVSMIRCGGDHSIVLKNNGT 278

Query: 493 VYAWGSNTMGQCGQ---DNFSNPV 513
           ++ WG N  GQ G    DN S PV
Sbjct: 279 IWIWGFNQHGQLGDRSTDNRSTPV 302



 Score =  114 bits (285), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 11/270 (4%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISV-AHSKVYTWGCNLHHQILDEVRGKCSRPR 213
           G  KS N    +++        + G  ++++ +   V+TWG N++ Q+ D      + P 
Sbjct: 143 GTTKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPV 202

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVS 270
                + I  I  G + +    + G +  +G    G LG    T + +P  V     I  
Sbjct: 203 QTRSLNTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLV---NGIKD 259

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +S+ +C   H + + + G ++ WG  +HG+LG  +T ++  P + MG L  K +  +  G
Sbjct: 260 VSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTP-VPMGDL--KNIMTIDGG 316

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
             HS  +  DG ++TWG  ++G+LG G   SR TP   + LS+V A++ GE H++ L  D
Sbjct: 317 GDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQASTLSNVTAIASGEQHSIALKSD 376

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           G T+W+ GS   G+LG       +TP +++
Sbjct: 377 G-TIWAWGSNRNGQLGDGSISNRSTPVLVK 405



 Score =  103 bits (258), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS 378
           ++   + QVS G  HS A+  DG + TWG+  HG+LG G    R  P  V +L++V A++
Sbjct: 55  IFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNNVTAIA 114

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
            G  H++ L+ DG TVW+ GS   G+LG   T     P  +  L+   +  + +    ++
Sbjct: 115 GGAWHSVALTSDG-TVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKN--ITAIASKGLHNL 171

Query: 439 ALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           AL  DG V+ WG  +       ++   +TPV    L++  I+ ++ G  H LA      +
Sbjct: 172 ALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNT--IISIAGGGYHSLAQKADGTI 229

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           + WG N  GQ G    +N    P  V G++DV + + C G
Sbjct: 230 WTWGLNQYGQLGDGTITNRT-IPVLVNGIKDVSMIR-CGG 267


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  144 bits (363), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/281 (36%), Positives = 147/281 (52%), Gaps = 21/281 (7%)

Query: 240 LLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           + VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EGEV S
Sbjct: 87  MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEGEVQS 143

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG G +G
Sbjct: 144 WGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYG 202

Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LGH D 
Sbjct: 203 NLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDL 261

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
                P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++   +PV
Sbjct: 262 EDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQCSPV 320

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 321 QVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  110 bits (275), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           +RV  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L D  + +V+C
Sbjct: 15  RRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTC 74

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  S+    V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 75  GADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 194 YGWGWGRYGNLG 205



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 196

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P+RV   A    +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERV-TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 256 LGHGDLEDHLVPHKLEA-LGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 315 DQCSPVQVRIPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESLDRNFPKI 373

Query: 419 IEAL 422
           IEAL
Sbjct: 374 IEAL 377


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  144 bits (362), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 180/384 (46%), Gaps = 28/384 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIV 269
           +P   +L  ++ H++ G     L+   G +  +G+   G L + T +   +   +E+  V
Sbjct: 69  KPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTV 128

Query: 270 S-LSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           S +    C E H   VT+ GE+YSWG G H  G LGHGN +    PK + G L G +V  
Sbjct: 129 SNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAY 188

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT 384
           VS G  H+A +T  G L+T+G+G  G LGHGDLKS   P  V  LS +   AV+CG  HT
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 385 -----LVLSQDGHTV-------WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
                +++++   +V       ++ G G+  +LGH D      P  +  L      +V  
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVAC 308

Query: 433 GTSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLAL 487
           G S +VALT  G V   G  +     + H+    P LV   +   Q++ ++ G  HV  L
Sbjct: 309 GHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVL 368

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
           +  NEV+ WG    G+ G  +  +    P+ V  L+D  VR I  G+ F+ A        
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDR-KVPTLVEVLKDRAVRYIACGANFTAAIC---QYK 424

Query: 548 ALSSAFTPLCVDVR-PHTFTLIRE 570
            +S A    C   R P  FT  R 
Sbjct: 425 WVSGADQSQCSSCRQPFGFTRKRR 448



 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 171/370 (46%), Gaps = 42/370 (11%)

Query: 174 LTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHI 224
           L  ++   D  V H+       +V+TWG +   ++    R  C RPRL +SL  SN+  +
Sbjct: 75  LVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFV 134

Query: 225 EAGQFCTFLLDSTGGLLVYGK-----GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
             G+F T  + +TG L  +G      G LG  N     +PKRV      + ++   C   
Sbjct: 135 ACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTW 194

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H   +TS G+++++G G  G LGHG+  S   P+ +   L G +   V+ G  H+AA+ E
Sbjct: 195 HTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVE-SLSGLKTIAVACGVWHTAAIVE 253

Query: 340 -------------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHT 384
                         G L+TWG+GD  RLGHGD ++R  PT V  L   D   V+CG S T
Sbjct: 254 VIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLT 313

Query: 385 LVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALT 441
           + L+  G  V SMG+   G+LG  H D G++  P ++E  +   +V ++  G+     LT
Sbjct: 314 VALTTSGQ-VLSMGNAVYGQLGNPHSD-GRI--PCLVEDKIVGEQVIQIACGSYHVAVLT 369

Query: 442 WDGLVFWWGLG----LRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
               VF WG G    L    I     P LV  L    +  ++ G +   A+ QY  V   
Sbjct: 370 GRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTAAICQYKWVSGA 429

Query: 497 GSNTMGQCGQ 506
             +    C Q
Sbjct: 430 DQSQCSSCRQ 439


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  144 bits (362), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 167/353 (47%), Gaps = 28/353 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   ++  ++ HI  G     L+   G +  +G+   G LG  +    IQP   R+   
Sbjct: 272 RPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP---RLVES 328

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+ ++    C E H   VT  GE+Y+WG G H  G LGHGN +S   PK I G L G +
Sbjct: 329 LAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQ 388

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGE 381
           V  V+ G  H+A VT  G L+T+G+G  G LGHGD ++   P  V  LS +   A +CG 
Sbjct: 389 VASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGV 448

Query: 382 SHT-----LVLSQDGH-----TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            HT     ++++Q         +++ G G+  +LGH D      P  + AL  +   K+ 
Sbjct: 449 WHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIA 508

Query: 432 AGTSFSVALTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +V LT  G VF  G      L +       P LV   LS   + +++ G  HV  
Sbjct: 509 CGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEEIACGAYHVAV 568

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           L+  NEVY WG    G+ G  +  +    P  V  L+D  V+ I  G+ ++ A
Sbjct: 569 LTSRNEVYTWGKGANGRLGHGDIED-RKAPILVEALKDRHVKYIACGANYTAA 620



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 141/333 (42%), Gaps = 76/333 (22%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG     ++   V     +PRL +SL  S +  +  G+F T  +   G +  +G
Sbjct: 298 QGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWG 357

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKR+  PLE   V+ SV+ C   H   VTS G+++++G G 
Sbjct: 358 DGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVA-SVT-CGPWHTALVTSTGQLFTFGDGT 415

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  +   P+ +   L G R    + G  H+AAV E            G L+TW
Sbjct: 416 FGVLGHGDRENVAYPREVES-LSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTW 474

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT----------- 393
           G+GD  RLGHGD + R  PT V  L D     ++CG S T+ L+  GH            
Sbjct: 475 GDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQL 534

Query: 394 ----------------------------------------VWSMGSGNLGKLGHEDTGKV 413
                                                   V++ G G  G+LGH D    
Sbjct: 535 GNPYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDR 594

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
             P ++EAL+   V+ +  G +++ A+    LV
Sbjct: 595 KAPILVEALKDRHVKYIACGANYTAAICLHKLV 627


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  144 bits (362), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 172/355 (48%), Gaps = 32/355 (9%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   ++  ++ HI  G     L+   G +  +G+   G LG  +    +QP      L 
Sbjct: 270 RPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPR-----LV 324

Query: 266 AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYG 321
            A++S ++    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK I G L G
Sbjct: 325 EALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEG 384

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSC 379
            ++  V+ G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  L  +   AV+C
Sbjct: 385 LQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVAC 444

Query: 380 GESHT-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
           G  HT     ++ +  G ++     ++ G G+  +LGH D      P  + AL  +   K
Sbjct: 445 GVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHK 504

Query: 430 VCAGTSFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLV-TGLSSHQIVDVSIGDSHV 484
           +  G S +V LT  G VF  G    G   SS+S    P LV   ++   I +++ G  HV
Sbjct: 505 IACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHV 564

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             L+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS +S A
Sbjct: 565 AVLTSKNEVYTWGKGANGRLGHGDIED-RKTPALVEALKDRHVKYIACGSNYSAA 618



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 140/328 (42%), Gaps = 78/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG     ++   V     +PRL    + + I  +  G+F +  +   G L  +G
Sbjct: 296 QGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWG 355

Query: 245 KGW-----LGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKR+  PLE   + ++   C   H   +TS G+++++G G 
Sbjct: 356 DGMHNAGLLGHGSNVSHWIPKRIAGPLEG--LQIAFVACGPWHTALITSTGQLFTFGDGT 413

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  +   P+ +   L G R   V+ G  H+AAV E            G L+TW
Sbjct: 414 FGVLGHGDRQNVSYPREVES-LLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTW 472

Query: 347 GEGDHGRLGHGDLKSRHTPTLVT------------------------------------- 369
           G+GD  RLGHGD ++R  PT V+                                     
Sbjct: 473 GDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVYGQL 532

Query: 370 --ELSD---------------VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
              LSD               +  ++CG  H  VL+   + V++ G G  G+LGH D   
Sbjct: 533 GSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSK-NEVYTWGKGANGRLGHGDIED 591

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             TP ++EAL+   V+ +  G+++S A+
Sbjct: 592 RKTPALVEALKDRHVKYIACGSNYSAAI 619


>gi|196012953|ref|XP_002116338.1| hypothetical protein TRIADDRAFT_60324 [Trichoplax adhaerens]
 gi|190580929|gb|EDV21008.1| hypothetical protein TRIADDRAFT_60324 [Trichoplax adhaerens]
          Length = 448

 Score =  144 bits (362), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 112/359 (31%), Positives = 168/359 (46%), Gaps = 36/359 (10%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI--RHIEAGQFCTFLLDSTGGL 240
           + V  SKVY WG    + +L         P    L  N+    I  G    F++   GG+
Sbjct: 1   MRVQPSKVYVWGSK-RNLLLAADEKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGV 59

Query: 241 LVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
              GKG    LGL N     +P+++P L   +V+         H + +T+EG VYSWG G
Sbjct: 60  FACGKGHMGCLGLGNCDDVNIPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGIVYSWGCG 119

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           + G+LGHGNTL    P LI   L  K VT+++ G  HS AV  DG +++WG+G +G   H
Sbjct: 120 DRGQLGHGNTLGYLDPTLI-DELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGACVH 178

Query: 357 GDLKSRHTPTLVT-ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVT 414
           G+  ++  P +++     + AV+CGE +T+ ++  G  VWS G G  G+LG+        
Sbjct: 179 GNNLAQLLPKIMSLNGKHIMAVACGECYTIAVA--GDDVWSWGHGGNGELGYGVKMPSYC 236

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQI 474
            P  IEAL    +  V  G + S A++  G V+ W                      +Q 
Sbjct: 237 MPTKIEALFFKGITNVACGYATSFAVSATGKVWAW--------------------VKNQK 276

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           V  S+   H LA+ +  +VY WGS  +G  G D   + V++  K   L +  +  I  G
Sbjct: 277 VVASL--FHALAIDENGQVYIWGSQEIGPVGND--EDAVNKQLKSFNLVNKKISNIACG 331


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  143 bits (361), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 180/381 (47%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P   +L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG  +    P+ I G L G ++ 
Sbjct: 129 -SNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG++KS   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   TV     ++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
            S +V LT  G V+  G    G   +  S   P LV   ++S  ++ ++ G  HV  L+ 
Sbjct: 308 HSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTS 367

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  VR I  G+ F+ A  +   +  +
Sbjct: 368 RSEVFTWGKGANGRLGHGDVEDR-KVPTTVEALRDRAVRHIACGANFTAAICL---HKWV 423

Query: 550 SSAFTPLCVDVR-PHTFTLIR 569
           S A    C   R P  FT  R
Sbjct: 424 SGADQSQCSSCRQPFGFTRKR 444



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 141/325 (43%), Gaps = 77/325 (23%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +V+TWG +   ++    R     PRL +SL  SNI  +  G+F T  + +TG L  +G G
Sbjct: 97  EVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDG 156

Query: 247 -----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
                 LG        +P+R+  PLE   + ++   C   H   +TS G+++++G G  G
Sbjct: 157 THNVGLLGHGTDVGHWIPRRISGPLEG--LQIAYVSCGTWHTALITSMGQLFTFGDGSFG 214

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTWGE 348
            LGHGN  S   P+ +   L G +   V+ G  H+AA+ E            G L+TWG+
Sbjct: 215 VLGHGNVKSISCPREVES-LSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGD 273

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS------- 399
           GD  RLGHGD ++R  PT V  L D     V+CG S T+ L+  G  VW+MG+       
Sbjct: 274 GDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSG-KVWTMGNSVYGQLG 332

Query: 400 --------------------------------------------GNLGKLGHEDTGKVTT 415
                                                       G  G+LGH D      
Sbjct: 333 NPNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKV 392

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P  +EALR   VR +  G +F+ A+
Sbjct: 393 PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 41.2 bits (95), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  I  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AASNIDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  143 bits (361), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 177/383 (46%), Gaps = 31/383 (8%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG  +      P+ V    A
Sbjct: 69  KPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVE-SLA 127

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           I ++ +  C E H   VT+ GE+Y+WG G H  G LG+G  +S   PK I G L G +V 
Sbjct: 128 ICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A VT  G L+T+G+G  G LGHG+ +S   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHT-----VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   +     +++ G G+  +LGH D      P  + +L  +   ++  G
Sbjct: 248 TAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACG 307

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S +V LT  G +   G      LG   S      P LV  +    +V V+ G  HV  L
Sbjct: 308 HSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKL--PCLVEDIMGEHVVQVACGSYHVAVL 365

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
           +  +EV+ WG    G+ G  +  +    P+ V  L D  VR I  GS F+ A      + 
Sbjct: 366 TNKSEVFTWGKGANGRLGHGDIED-RKIPTLVEALRDRGVRHIACGSNFTSAIC---QHK 421

Query: 548 ALSSAFTPLCVDVR-PHTFTLIR 569
            +S A    C   R P  FT  R
Sbjct: 422 WVSGAEQSQCASCRQPFGFTRKR 444



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 141/345 (40%), Gaps = 78/345 (22%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRH 223
           KL  ++   D  V H+       +V+TWG     ++    R     PRL +SL   N+  
Sbjct: 74  KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI 133

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + + G L  +G G      LG        +PKR+        ++   C  
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGT 193

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   VTS G+++++G G  G LGHGN  S   P+ +   L G +   V+ G  H+AAV 
Sbjct: 194 WHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVES-LSGLKTIAVACGVWHTAAVV 252

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD + R  PT V  L   D   ++CG S T+
Sbjct: 253 EVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTV 312

Query: 386 VLSQDGH--------------------------------------------------TVW 395
            L+  G                                                    V+
Sbjct: 313 GLTTSGQILSMGNTVYGQLGNPRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVF 372

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           + G G  G+LGH D      P ++EALR   VR +  G++F+ A+
Sbjct: 373 TWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAI 417


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  143 bits (361), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 146/285 (51%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G  VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 74  SQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTXEG 130

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G R+  V+AG  H+AAVTEDG LY WG 
Sbjct: 131 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKXVAAGAEHTAAVTEDGDLYGWGW 189

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT         V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 190 GRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSG-ALYTYGWSKYGQLG 248

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   + ALT DG ++ WG      +G+  +++  
Sbjct: 249 HGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGV-GNNLDQ 307

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 308 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 352



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+C
Sbjct: 6   RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 65

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 125

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +      +I  V+ G  H  A+++  ++
Sbjct: 126 VTXEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDL 184

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 185 YGWGWGRYGNLG 196



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 130 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDL--YGW 187

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL + T + +P+RV          V+ C   H ++V+  G +Y++G  ++G+
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVA-CGWRHTISVSYSGALYTYGWSKYGQ 246

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 247 LGHGDLEDHLIPHKLEA-LSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL 305

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 306 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 364

Query: 419 IEAL 422
           IEAL
Sbjct: 365 IEAL 368


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 177/383 (46%), Gaps = 31/383 (8%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG  +      P+ V    A
Sbjct: 69  KPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVE-SLA 127

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           I ++ +  C E H   VT+ GE+Y+WG G H  G LG+G  +S   PK I G L G +V 
Sbjct: 128 ICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A VT  G L+T+G+G  G LGHG+ +S   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGVWH 247

Query: 384 T-----LVLSQDGHT-----VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   +     +++ G G+  +LGH D      P  + +L  +   ++  G
Sbjct: 248 TAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACG 307

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S +V LT  G V   G      LG   S      P L+  +    +V V+ G  HV  L
Sbjct: 308 HSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKL--PCLIEDIMGEHVVQVACGSYHVAVL 365

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
           +  +EV+ WG    G+ G  +  +    P+ V  L D  VR I  GS F+ A      + 
Sbjct: 366 TNKSEVFTWGKGANGRLGHGDVEDR-KIPTLVESLRDRAVRHIACGSNFTSAIC---QHK 421

Query: 548 ALSSAFTPLCVDVR-PHTFTLIR 569
            +S A    C   R P  FT  R
Sbjct: 422 WVSGAEQSQCASCRQPFGFTRKR 444



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 142/345 (41%), Gaps = 78/345 (22%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRH 223
           KL  ++   D  V H+       +V+TWG     ++    R     PRL +SL   N+  
Sbjct: 74  KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI 133

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + ++G L  +G G      LG        +PKR+        ++   C  
Sbjct: 134 VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGT 193

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   VTS G+++++G G  G LGHGN  S   P+ +   L G +   V+ G  H+AAV 
Sbjct: 194 WHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVES-LSGLKTIAVACGVWHTAAVV 252

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD + +  PT V  L   D   ++CG S T+
Sbjct: 253 EVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTV 312

Query: 386 VLSQDGHT--------------------------------------------------VW 395
            L+  G                                                    V+
Sbjct: 313 GLTTSGQVLSMGNTVYGQLGNPRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVF 372

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           + G G  G+LGH D      P ++E+LR   VR +  G++F+ A+
Sbjct: 373 TWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAI 417



 Score = 41.2 bits (95), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  S   S H P LV  L
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           +   +  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AICNVDIVACGEFHTCAVTTSGELYTWGDGT 157


>gi|296483226|tpg|DAA25341.1| TPA: hect domain and RCC1-like domain 1 [Bos taurus]
          Length = 532

 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 167/328 (50%), Gaps = 45/328 (13%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                       + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143 LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
           +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180 DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           DT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364 DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
            G++GKLGHGN+ +Q+ PKLI G L GK
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGK 511



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V+   EVY WG     +L  G      +PKL            + AG   +  ++ DG +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF---SDAQTIEAGQYCTFVISTDGSV 424

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
              G+G +GRLG GD  ++ T   +T      +  V +    + HTL  + +G  V+S G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE-VFSWG 483

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            G+ GKLGH ++     PK+I+   +    KVCA
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQ---GKVCA 514


>gi|417402521|gb|JAA48106.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 541

 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 165/331 (49%), Gaps = 45/331 (13%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                       + SLR  +   +     +A +N LE+        Q  +I   C + ++
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSLEK--NKLLSSQEGMISFDCFMTIL 303

Query: 143 LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
           +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180 DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           D  I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364 DAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
            G++GKLGHGN+ +Q+ PKLI G L GK  T
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVCT 514



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V+   EVY WG     +L  G      +PKL            + AG   +  ++ DG +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF---SDAQTIEAGQYCTFVISTDGSV 424

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
              G+G +GRLG GD  ++ T   +T      +  V +    + HTL  + +G  V+S G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE-VFSWG 483

Query: 399 SGNLGKLGHEDTGKVTTPKVIEA 421
            G+ GKLGH ++     PK+I+ 
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQG 506



 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           V+E   +Y WG     +L  G  +    P L    SD   +  G+  T V+S DG +V +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG-SVRA 426

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT---SFSVALTWDGLVFWWGLG 452
            G G+ G+LG  D+   +T K +       ++KV +       ++A T +G VF WG G
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG 485


>gi|332105901|gb|AEE01409.1| HECT [Bubalus bubalis]
          Length = 532

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 165/328 (50%), Gaps = 45/328 (13%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                       + SLR  +   +     +A +N +E+        Q  +I   C + ++
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEK--SKLLSSQEGMISFDCFMTIL 303

Query: 143 LV-----------------TLADDNIKPLGDR------KSSNSNTDIDSTSTPKLTYNIG 179
           +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFGEVCRMASDYSRTCASPDSIQTG 363

Query: 180 DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           DT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364 DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +   GKG    LGL ++  Q   K++  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
            G++GKLGHGN+ +Q+ PKLI G L GK
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGK 511



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V+   EVY WG     +L  G      +PKL            + AG   +  ++ DG +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF---SDAQTIEAGQYCTFVISTDGSV 424

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
              G+G +GRLG GD  ++ T   +T      +  V +    + HTL  + +G  V+S G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE-VFSWG 483

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            G+ GKLGH ++     PK+I+   +    KVCA
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQ---GKVCA 514


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  142 bits (359), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/285 (36%), Positives = 148/285 (51%), Gaps = 21/285 (7%)

Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           S  G+ VY  GW     LG  N++    PLP +      I  ++   C ++H L VT EG
Sbjct: 83  SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 139

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV SWG  ++G+LG G+T     P+ I     G  +  V+AG  H+AAVTEDG LY WG 
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIPIKMVAAGAEHTAAVTEDGDLYGWGW 198

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G +G LG GD   R  P  VT      +  V+CG  HT+ +S  G  +++ G    G+LG
Sbjct: 199 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 257

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           H D      P  +EAL    + ++  G   ++ALT DG ++ WG      +G+  +++  
Sbjct: 258 HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 316

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +PV V      ++V VS G  H LA+++ N V+AWG  T GQ G
Sbjct: 317 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L    + +V+C
Sbjct: 15  RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  SQ G  V+S G G+ G+LGH ++  + TP  I+AL   R++++  G S  +A
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL  +  S   P  +       I  V+ G  H  A+++  ++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDL 193

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 194 YGWGWGRYGNLG 205



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L +        ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDL--YGW 196

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL + T + +P+RV        +S+  C   H ++V+  G +Y++G  ++G+
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGG-EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G G+  
Sbjct: 256 LGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + +P  V    D  V  VSCG  HTL +++  + V++ G G  G+LG  ++     PK+
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 373

Query: 419 IEAL 422
           IEAL
Sbjct: 374 IEAL 377


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 160/324 (49%), Gaps = 20/324 (6%)

Query: 232 FLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAI-VSLSVSKCSEAHVLTVTSE 287
            L D++  L ++G   +G LG  +   + LP  V  E+ +  ++++  C  +H + + S+
Sbjct: 156 LLKDNSCDLYLWGGGDRGRLGHKDDKPRFLPNVV--ESLLGQNVTMIACGGSHTIALNSK 213

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G+V+SWG G  G LGHGN   +  P +I G L    V  V+   +HSA ++EDG LYTWG
Sbjct: 214 GQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWG 273

Query: 348 EGDHGRLGHGD--LKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           +     LG+ D  +  +  P LV  L  + +  V+CG SHTLV+ ++G  V+S G    G
Sbjct: 274 KAGP-FLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGR-VYSFGINKFG 331

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           +LG      +T P ++  L    + KV  G   S A+  DG++F WG G R         
Sbjct: 332 ELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPK 389

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSNPVDQPS 517
           S  +P  V G +   + DVS G  H  A++     Y WG N   QCG   +    +  P 
Sbjct: 390 SLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPR 449

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +V    +   QI  G+ F++  T
Sbjct: 450 GIVLPSGIRPTQINCGANFTVLVT 473



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 100/264 (37%), Gaps = 65/264 (24%)

Query: 190 VYTWG-CNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
           +YTWG        +D+   K ++PRL      + I  +  G+  T ++D  G +  +G  
Sbjct: 269 LYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGIN 328

Query: 246 --GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG  +      P  VP    +VS+    C   H   +  +G ++ WG G  G+LG 
Sbjct: 329 KFGELGQGHDKAITKPTMVP---NLVSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQ 385

Query: 304 GNTLSQRRPKLIMG----------------------------------------GLYGK- 322
           G   S   P  + G                                         +YG+ 
Sbjct: 386 GEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGEL 445

Query: 323 ------------RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVT 369
                       R TQ++ G + +  VT  G L+TWG    G+LG+G+ K   + P  V 
Sbjct: 446 SSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVE 505

Query: 370 ELSD--VGAVSCGESHTLVLSQDG 391
            LS+  V  V+CGE H   L   G
Sbjct: 506 SLSEKRVKMVACGEDHIGCLVGHG 529


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 174/360 (48%), Gaps = 21/360 (5%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           V+  +VY+WG     Q+ +      + P +    +++  +  G   T  L S G +  +G
Sbjct: 49  VSSGEVYSWGYGDRGQLGNGTWSARTTPVMAKGLNHVIDVHTGVRSTMALRSDGTVWTWG 108

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG+   T   +P +V   + I   +VS     H + ++ +G V++WG  ++G+L
Sbjct: 109 SNENGQLGIGTVTDMNVPGQVSGLSGI--KAVSGGLGYHSMALSEDGSVWTWGKNDNGEL 166

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G+G TL Q  P  + G      VT ++AG   S A+  DG ++ WG    G LG G    
Sbjct: 167 GNGTTLQQNTPVQVAGL---NDVTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTTD 223

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R+ P  V  L+DV A++ G SH+L ++QDG TVW+ G    G LG       T P  I+ 
Sbjct: 224 RYVPVQVAGLTDVMAIAAGGSHSLAVTQDG-TVWAWGKNTYGTLGDGTRTNRTRPVQIKN 282

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L+   +  V  G   S+AL   G V+ WG      LG+ S++ S   PV V+G+    + 
Sbjct: 283 LQ--HIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSL-IPVPVSGI--EHVR 337

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
           +++ G  H +A+ +   V+ WG N  GQ G D  S+  D P+    + D       +G+L
Sbjct: 338 EIAAGGFHSVAMKKDGTVWGWGFNGGGQLG-DGTSSTRDTPTLTKAVLDTTPPDPGSGTL 396


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 168/353 (47%), Gaps = 28/353 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   ++  ++ HI  G     ++   G +  +G+   G LG  +    IQP   R+   
Sbjct: 272 RPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP---RLVES 328

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+ ++    C E H   VT  GE+Y+WG G H  G LGHG  +S   PK I G L G +
Sbjct: 329 LAMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQ 388

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGE 381
           V  V+ G  H+A VT  G L+T+G+G  G LGHG+ ++   P  V  L+ +   AV+CG 
Sbjct: 389 VASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGV 448

Query: 382 SHT-----LVLSQDGH-----TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            HT     ++++Q         +++ G G+  +LGH D      P  + AL  F   K+ 
Sbjct: 449 WHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIA 508

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +V LT  G VF  G      L +       P LV   LS   + +++ G  HV  
Sbjct: 509 CGHSLTVGLTTSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAV 568

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           L+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  G+ +S A
Sbjct: 569 LTSRNEVYTWGKGANGRLGHGDGED-RKTPTLVEALKDKHVKYIACGANYSAA 620



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 140/327 (42%), Gaps = 76/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG     ++   V     +PRL +SL  + +  I  G+F T  +   G +  +G
Sbjct: 298 QGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTMAGEIYTWG 357

Query: 245 KGW-----LGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG        +PKR+  PLE   V+ SV+ C   H   VTS G+++++G G 
Sbjct: 358 DGMHYAGLLGHGTDISHWIPKRISGPLEGLQVA-SVT-CGPWHTALVTSTGQLFTFGDGT 415

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHGN  +   PK +   L G R   V+ G  H+AAV E            G L+TW
Sbjct: 416 FGVLGHGNRENIAYPKEVES-LAGLRTIAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTW 474

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT----------- 393
           G+GD  RLGHGD + R  PT V  L D     ++CG S T+ L+  GH            
Sbjct: 475 GDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQL 534

Query: 394 ----------------------------------------VWSMGSGNLGKLGHEDTGKV 413
                                                   V++ G G  G+LGH D    
Sbjct: 535 GNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDR 594

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
            TP ++EAL+   V+ +  G ++S A+
Sbjct: 595 KTPTLVEALKDKHVKYIACGANYSAAI 621


>gi|157074082|ref|NP_001096752.1| probable E3 ubiquitin-protein ligase HERC1 [Bos taurus]
 gi|124829173|gb|AAI33287.1| HERC1 protein [Bos taurus]
          Length = 532

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 166/328 (50%), Gaps = 45/328 (13%)

Query: 37  TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKAD----- 91
           +L N V+ T++ +V +LPPLSL+NE+++  +G++ L+QV+TFL+  VT  +  AD     
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGADTLGRR 245

Query: 92  ---------KTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
                       + SLR  +   +     +A +N +E+    ++  Q  +I   C + ++
Sbjct: 246 LASELLLGLAAQRGSLRYLLEWIEMALGASAVVNSMEKSKLLSS--QEGMISFDCFMTIL 303

Query: 143 LV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNIG 179
           +                  T   D +  L +       +     +D   T     +   G
Sbjct: 304 MQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTG 363

Query: 180 DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           DT I     +VY WG N  HQ+++  + K  +P+L    S+ + IEAGQ+CTF++ + G 
Sbjct: 364 DTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGS 423

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +   GKG    LGL ++  Q   K +  E   +I  +S SK S+ H L  T+EGEV+SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKNLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
            G++GKLGHGN+ +Q+ PKLI G L GK
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGK 511



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V+   EVY WG     +L  G      +PKL            + AG   +  ++ DG +
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF---SDAQTIEAGQYCTFVISTDGSV 424

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVT-----ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
              G+G +GRLG GD  ++ T   +T      +  V +    + HTL  + +G  V+S G
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKNLTFEPHRSIKKVSSSKGSDGHTLAFTTEGE-VFSWG 483

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            G+ GKLGH ++     PK+I+   +    KVCA
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQ---GKVCA 514


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 158/302 (52%), Gaps = 12/302 (3%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG A    + LP+ + L  ++ S+S+  C  AHV+ +TS+G+V++WG G  G+LGHG+
Sbjct: 26  GQLGTAKLQDELLPQLLSL-TSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQLGHGD 84

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L+   PKL+     G  +TQ +AG SHS  V++ G L+T G G  G+LGHGD  S  TP
Sbjct: 85  ILNITLPKLVS-FFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNMSLRTP 143

Query: 366 TLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH--EDTGKVTTPKVIEA 421
             V+  S+  V  V+CG  H+LVL   G+ V   GSG  G+LG   + T  V  P V+  
Sbjct: 144 AKVSYFSNESVKMVACGMRHSLVLLA-GNQVCGFGSGKRGQLGFTSDGTKSVNLPCVVSG 202

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           L+   V ++ A    S A++ DG  F WG G   +     TP  +   SS     V++G 
Sbjct: 203 LKDVEVTRISANGDHSAAISADGQFFSWGRGF-CAGPDVQTPQCLP--SSLSFRKVAVGW 259

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP--SKVVGLEDVCVRQICAGSLFSIA 539
           +H L L+   EV+  G+    Q  +        +   +KV   + V V QI AG+  S A
Sbjct: 260 NHALLLTVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVSDFDGVKVLQIAAGAEHSAA 319

Query: 540 YT 541
            T
Sbjct: 320 VT 321



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 112/235 (47%), Gaps = 16/235 (6%)

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTL--VTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           E+  +++WG G  G+LG   L+    P L  +T L  +  ++CG +H + L+ DG  V++
Sbjct: 13  EEQQVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGK-VFT 71

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
            G G+ G+LGH D   +T PK++     + + +  AG S S  ++  G +F  G G    
Sbjct: 72  WGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQ 131

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFS 510
                ++S  TP  V+  S+  +  V+ G  H L L   N+V  +GS   GQ G   + +
Sbjct: 132 LGHGDNMSLRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDGT 191

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-------TPLCV 558
             V+ P  V GL+DV V +I A    S A +      +    F       TP C+
Sbjct: 192 KSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCAGPDVQTPQCL 246



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 30/149 (20%)

Query: 234 LDSTGGLLVYGKGWL-GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           + + G    +G+G+  G    T Q LP  +      V  +       H L +T +GEV+ 
Sbjct: 221 ISADGQFFSWGRGFCAGPDVQTPQCLPSSLSFRKVAVGWN-------HALLLTVDGEVF- 272

Query: 293 WGVGEHGKLGHGNTLSQRRPK------------LIMGGLYGKRVTQVSAGHSHSAAVTED 340
                  KLG  NTL+++  K              +    G +V Q++AG  HSAAVTE+
Sbjct: 273 -------KLG--NTLNKQPEKQQLQIDSSEALLAKVSDFDGVKVLQIAAGAEHSAAVTEN 323

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
           G + TWG G+HG+LG G+   + +P LV+
Sbjct: 324 GKVKTWGWGEHGQLGLGNTNDQTSPQLVS 352


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 193/417 (46%), Gaps = 48/417 (11%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G H  G LGHG+ +S   P+ + G + G RV+ +S G  H
Sbjct: 349 CGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWH 408

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLV----- 386
           +A VT  G L+T+G+G  G LGHGD  + + P  V  L  +    V+CG  HT       
Sbjct: 409 TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAI 468

Query: 387 --LSQDG-------HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
             LS  G         +++ G G+ G+LGH D      P+ + AL + R+ +V  G   +
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLT 528

Query: 438 VALTWDGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNE 492
           VALT  G V+  G      L S++ +   P  V G  ++  V +V+ G  HV  L+  NE
Sbjct: 529 VALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNE 588

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSA 552
           VY WG    GQ G  + +N  + P+ V  L+D  V+ +  GS F++   +   +  +SSA
Sbjct: 589 VYTWGKGLNGQLGHGD-NNHRNTPTIVDVLKDKQVKNVACGSKFTVVICI---HKWVSSA 644

Query: 553 FTPLCVDV-RPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLL--------RL 603
              +C     P  F   R        C+  G  + FC   +  + +   L        R+
Sbjct: 645 DHSVCSGCHNPFGFRRKRH------NCYNCG--LVFCKACSSKKSLKASLAPNLNKPYRV 696

Query: 604 LSSHLYLALIGARSSSVLGNETAALRHVLFK---LVDMET-SPEIETLLTDCLAIGA 656
                        SSSV  N  A   ++ +K   ++D ET  P+++  L+   + GA
Sbjct: 697 CDDCFNKLKKIMESSSVSQNARARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGA 753



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 152/331 (45%), Gaps = 33/331 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             ++++WG     ++   V    S P++    S  N+  +  G++ T  +  +G L  +G
Sbjct: 308 QGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWG 367

Query: 245 KG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
            G      LG  +     +P++V  +   + +S   C   H   VTS G+++++G G  G
Sbjct: 368 DGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFG 427

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------------DGLLY 344
            LGHG+ ++   P+ +   L G R T+V+ G  H+AA  E                  LY
Sbjct: 428 ALGHGDHITSNFPREVE-TLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLY 486

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG+GD GRLGHGD + R  P  V  L +  +  V+CG   T+ L+  G  V++MGS   
Sbjct: 487 TWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGR-VYTMGSTAY 545

Query: 403 GKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SS 456
           G+LG     GK+ T    E    F V +V  G+     LT    V+ WG GL        
Sbjct: 546 GQLGSATANGKLPTCVEGEIANSF-VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGD 604

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           +   +TP +V  L   Q+ +V+ G    + +
Sbjct: 605 NNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 126/274 (45%), Gaps = 30/274 (10%)

Query: 258 LPKRVPLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           LPK   LE+ +V  +    C   H + VT +GE++SWG    G+LGHG       PK+I 
Sbjct: 280 LPK--ALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKII- 336

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---EL 371
             L G  V  V+ G  H+ AVT  G LYTWG+G H  G LGHG   S   P  V+   E 
Sbjct: 337 DTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEG 396

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
             V  +SCG  HT V++  G  +++ G G+ G LGH D      P+ +E LR  R  KV 
Sbjct: 397 IRVSYISCGAWHTAVVTSAGQ-LFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVA 455

Query: 432 AGTSFSVA-------LTWDGL--------VFWWGLGLR-----SSSISFHTPVLVTGLSS 471
            G   + A       L+  G         ++ WG G +       +     P  V  L  
Sbjct: 456 CGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALME 515

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +I  V+ G+   +AL+    VY  GS   GQ G
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG 549



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 23/163 (14%)

Query: 181 TDISVAHSKVYTWGCNLHHQILDEVRGKC----SRPRLQS------LPSNIRHIEAGQFC 230
           T  S +  K+YTWG        D  +G+     + PRL        +   I  +  G   
Sbjct: 476 TSASPSSRKLYTWG--------DGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDL 527

Query: 231 TFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
           T  L + G +   G    G LG A T    LP  V  E A   +    C   HV  +TS+
Sbjct: 528 TVALTTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSK 586

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
            EVY+WG G +G+LGHG+  + R    I+  L  K+V  V+ G
Sbjct: 587 NEVYTWGKGLNGQLGHGDN-NHRNTPTIVDVLKDKQVKNVACG 628


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  142 bits (357), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 192/417 (46%), Gaps = 48/417 (11%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G H  G LGHG+ +S   P+ + G + G RV+ +S G  H
Sbjct: 349 CGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWH 408

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLV----- 386
           +A VT  G L+T+G+G  G LGHGD  + + P  V  L  +    V+CG  HT       
Sbjct: 409 TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAI 468

Query: 387 --LSQDG-------HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
             LS  G         +++ G G+ G+LGH D      P+ + AL + R+ +V  G   +
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLT 528

Query: 438 VALTWDGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNE 492
           VALT  G V+  G      L S++ +   P  V G  ++  V +V+ G  HV  L+  NE
Sbjct: 529 VALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNE 588

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSA 552
           VY WG    GQ G  + +N  + P+ V  L+D  V+ +  GS F++   +   +  +SSA
Sbjct: 589 VYTWGKGLNGQLGHGD-NNHRNTPTIVDVLKDKQVKNVACGSKFTVVICI---HKWVSSA 644

Query: 553 FTPLCVDV-RPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFILLLLRLLSSHLYLA 611
              +C     P  F   R        C+  G  + FC   +  + +   L       Y  
Sbjct: 645 DHSVCSGCHNPFGFRRKRH------NCYNCG--LVFCKACSSKKSLKASLAPNXKKPYRV 696

Query: 612 LIGA--------RSSSVLGNETAALRHVLFK---LVDMET-SPEIETLLTDCLAIGA 656
                        SSSV  N  A   ++ +K   ++D ET  P+++  L+   + GA
Sbjct: 697 CDDCFNKLKKIMESSSVSQNARARTGNIHYKSNGVMDKETWVPKLQATLSRLSSFGA 753



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 125/274 (45%), Gaps = 30/274 (10%)

Query: 258 LPKRVPLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           LPK   LE+ +V  +    C   H + VT +GE++SWG    G+LGHG       PK+I 
Sbjct: 280 LPK--ALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKII- 336

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLV---TEL 371
             L G  V  V+ G  H+ AVT  G LYTWG+G H  G LGHG   S   P  V    E 
Sbjct: 337 DTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEG 396

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
             V  +SCG  HT V++  G  +++ G G+ G LGH D      P+ +E LR  R  KV 
Sbjct: 397 IRVSYISCGAWHTAVVTSAGQ-LFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVA 455

Query: 432 AGTSFSVA-------LTWDGL--------VFWWGLGLR-----SSSISFHTPVLVTGLSS 471
            G   + A       L+  G         ++ WG G +       +     P  V  L  
Sbjct: 456 CGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIE 515

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +I  V+ G+   +AL+    VY  GS   GQ G
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG 549



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 23/163 (14%)

Query: 181 TDISVAHSKVYTWGCNLHHQILDEVRGKC----SRPRL------QSLPSNIRHIEAGQFC 230
           T  S +  K+YTWG        D  +G+     + PRL        +   I  +  G   
Sbjct: 476 TSASPSSRKLYTWG--------DGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDL 527

Query: 231 TFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
           T  L + G +   G    G LG A T    LP  V  E A   +    C   HV  +TS+
Sbjct: 528 TVALTTAGRVYTMGSTAYGQLGSA-TANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSK 586

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
            EVY+WG G +G+LGHG+  + R    I+  L  K+V  V+ G
Sbjct: 587 NEVYTWGKGLNGQLGHGDN-NHRNTPTIVDVLKDKQVKNVACG 628


>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 1419

 Score =  142 bits (357), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 148/273 (54%), Gaps = 20/273 (7%)

Query: 276 CSEAHVLTVTSEGE-VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
             ++H L   S GE V +WG   +G+LG G  + +  P  + G L G + + V+AG +HS
Sbjct: 510 AGDSHSL---SAGEYVMAWGSNTYGQLGDGTNIQRSTPVRVQG-LKG-QASSVAAGGTHS 564

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+ +D  +  WG  DHG+LG G   +R+T   V  LSD+  ++ GE H+L +  DG +V
Sbjct: 565 LALLQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGLSDIVGIAAGERHSLAVQSDG-SV 623

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           W+ G  + G+LG     + +TP  ++ L   +V K+ AG   S+A+T DG V+ WG    
Sbjct: 624 WAWGDNSSGQLGDGTLKERSTPVKVKGLS--QVTKIAAGGDTSLAITADGKVWAWGNNQD 681

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG   ++ +  TPVLV GLS   +  VS+G +H LAL     V+AWG N+    G  +
Sbjct: 682 GQLG-DGTTNNQSTPVLVPGLS--DVTTVSVGWTHCLALKSDGGVWAWGDNSQSILGTGS 738

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                  P++V GL  V    I AG+ FS+A T
Sbjct: 739 ADAYCAVPTQVKGLSGVTA--ISAGNQFSLAMT 769



 Score =  131 bits (330), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 165/370 (44%), Gaps = 41/370 (11%)

Query: 165 DIDSTSTPKLTYNI---------------GDTDISVAHSKVYTWGCNLHHQILDEVRGKC 209
           D+D  + P  TY+                GD+    A   V  WG N + Q+ D    + 
Sbjct: 482 DLDGLTLPDYTYDFTVSLPFNTFQGGVSAGDSHSLSAGEYVMAWGSNTYGQLGDGTNIQR 541

Query: 210 SRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           S P R+Q L      + AG   +  L     +  +G    G LG  + T +     V   
Sbjct: 542 STPVRVQGLKGQASSVAAGGTHSLALLQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGL 601

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + IV ++     E H L V S+G V++WG    G+LG G TL +R   + + GL   +VT
Sbjct: 602 SDIVGIA---AGERHSLAVQSDGSVWAWGDNSSGQLGDG-TLKERSTPVKVKGL--SQVT 655

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
           +++AG   S A+T DG ++ WG    G+LG G   ++ TP LV  LSDV  VS G +H L
Sbjct: 656 KIAAGGDTSLAITADGKVWAWGNNQDGQLGDGTTNNQSTPVLVPGLSDVTTVSVGWTHCL 715

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKV----TTPKVIEALRKFRVRKVCAGTSFSVALT 441
            L  DG  VW+ G  +   LG   TG        P  ++ L    V  + AG  FS+A+T
Sbjct: 716 ALKSDGG-VWAWGDNSQSILG---TGSADAYCAVPTQVKGLSG--VTAISAGNQFSLAMT 769

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
             G+   WG      LG  S++    TPV +  +    +VD SI      AL       +
Sbjct: 770 NQGVAEAWGRNDFNQLGDGSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCGTLGTRS 829

Query: 496 WGSNTMGQCG 505
           WG N  GQ G
Sbjct: 830 WGYNASGQLG 839



 Score =  117 bits (294), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 16/271 (5%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +  +  V +WG  +HG+LG G + + R     + GL    +  ++AG  HS AV  
Sbjct: 563 HSLALLQDKSVAAWGNNDHGQLGDG-SFTNRNTAATVNGL--SDIVGIAAGERHSLAVQS 619

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG+   G+LG G LK R TP  V  LS V  ++ G   +L ++ DG  VW+ G+
Sbjct: 620 DGSVWAWGDNSSGQLGDGTLKERSTPVKVKGLSQVTKIAAGGDTSLAITADGK-VWAWGN 678

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T   +TP ++  L    V  V  G +  +AL  DG V+ WG      LG 
Sbjct: 679 NQDGQLGDGTTNNQSTPVLVPGLSD--VTTVSVGWTHCLALKSDGGVWAWGDNSQSILGT 736

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
            S+      P  V GLS   +  +S G+   LA++      AWG N   Q G  + +   
Sbjct: 737 GSADAYCAVPTQVKGLSG--VTAISAGNQFSLAMTNQGVAEAWGRNDFNQLGDGSAAKFE 794

Query: 514 DQPSKVVGLEDVCV--RQICAGSLFSIAYTV 542
             P ++  +  V V  + I AG   ++  T+
Sbjct: 795 STPVQIKNMPLVPVVDQSISAGGYHALCGTL 825



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 21/225 (9%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+   ++    +EA+ L + S+G V+ WG G  G     N  +     L+   +  K +T
Sbjct: 46  ASGAKITAISANEAYALAMKSDGTVWGWGTGPLG-----NNDADSNSALVP--VQAKNLT 98

Query: 326 QV---SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
            V   SAG   + A+  DG +++WG   +G LG G   +R++P  V  LS + A++ G S
Sbjct: 99  DVIAISAGGDVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVPSLSGISAIATGYS 158

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           + L L  DG TVW+ GS   G LG   T    TP  I  L    V  + A    S A+  
Sbjct: 159 YCLALKNDG-TVWAWGSNQNGALGDGTTDDRKTPVQISGLSG--VVSIAANYHSSYAIKS 215

Query: 443 DGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           DG V+ WGL  +          L  GLS  Q + ++ G S++ +L
Sbjct: 216 DGTVWAWGLNDQGQ--------LGDGLSKDQWLPINTGLSNIKSL 252



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 20/299 (6%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           +++  I AG      L + G +  +G    G LG  +TT +  P  VP   ++  +S   
Sbjct: 98  TDVIAISAGGDVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVP---SLSGISAIA 154

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
              ++ L + ++G V++WG  ++G LG G T  ++ P  I G L G  V  ++A +  S 
Sbjct: 155 TGYSYCLALKNDGTVWAWGSNQNGALGDGTTDDRKTPVQISG-LSG--VVSIAANYHSSY 211

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           A+  DG ++ WG  D G+LG G  K +  P + T LS++ ++  G     V+ QDG ++W
Sbjct: 212 AIKSDGTVWAWGLNDQGQLGDGLSKDQWLP-INTGLSNIKSLIPGGFSLTVIKQDG-SLW 269

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LG 452
            +G    G + ++         +++      V    AG +  +A+  D  V+ WG    G
Sbjct: 270 QLGLSVNGSVSND-----VEYTLVQVPGLSHVVSAAAGQNNFMAILQDQTVWTWGNALPG 324

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             S +     PV V GLS        +G  + LAL     V+AWG+N  G+ G     N
Sbjct: 325 YGSMNTVTPQPVQVQGLSGTYSAVACLG-WYDLALKTDGTVWAWGNNMNGELGDGTKDN 382



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 14/157 (8%)

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           A+S  E++ L +  DG TVW  G+G LG     D+     P  ++A     V  + AG  
Sbjct: 53  AISANEAYALAMKSDG-TVWGWGTGPLGN-NDADSNSALVP--VQAKNLTDVIAISAGGD 108

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            ++AL  DG V+ WG      LG   S+ + ++P  V  LS   I  ++ G S+ LAL  
Sbjct: 109 VALALKNDGTVWSWGSNQYGELG-DGSTTNRNSPAPVPSLSG--ISAIATGYSYCLALKN 165

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
              V+AWGSN  G  G D  ++    P ++ GL  V 
Sbjct: 166 DGTVWAWGSNQNGALG-DGTTDDRKTPVQISGLSGVV 201



 Score = 42.7 bits (99), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 9/118 (7%)

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGL----RSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           ++  + A  ++++A+  DG V+ WG G      + S S   PV    L+   ++ +S G 
Sbjct: 50  KITAISANEAYALAMKSDGTVWGWGTGPLGNNDADSNSALVPVQAKNLT--DVIAISAGG 107

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              LAL     V++WGSN  G+ G  + +N  + P+ V  L  +    I  G  + +A
Sbjct: 108 DVALALKNDGTVWSWGSNQYGELGDGSTTN-RNSPAPVPSLSGISA--IATGYSYCLA 162


>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
          Length = 1207

 Score =  142 bits (357), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 197/403 (48%), Gaps = 44/403 (10%)

Query: 162 SNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCN------LHHQILDEVRGKCSRPRLQ 215
           +N D  +TS+ K     GD      +++V++WG +      L  QI  + +     PR  
Sbjct: 43  ANHDALNTSSNKSQVQGGD------YTEVFSWGSDKFGQLGLGKQISSQKQFHMV-PRFC 95

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYG-----KGWLGLANTTIQPLPKRVPLEAAIVS 270
           S    I  +  G   +  +  T   L+Y      +G LG+ +   Q     V +E  +  
Sbjct: 96  SYNIPITQVSCGTSHSVFI--TSSQLIYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNH 153

Query: 271 LSVS-KCSEAHVLTVTSEGEVYSWGVGEHGKLGHG----NTLSQRRPKLIMGGLYGKR-V 324
             +   C   H L +  +GEVYSWG  E+G+ G G    +T+ Q  PK++    Y +  +
Sbjct: 154 KPIQISCGNNHTLALMRDGEVYSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFI 213

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-VGAVSCGESH 383
            Q+ +G  HS  V E G L+  G+GD G+LG+   +   +P  ++++ + +  V+CG+ H
Sbjct: 214 KQIDSGAFHSGFVDEIGRLFMCGKGDQGQLGNMSYQDELSPFYISKIPEKIQEVACGDDH 273

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT-----PKVIEALRKFRVRKVCAGTSFSV 438
           T+VL+++G  +++MGS + G+LG   TG  ++     P +++ L   R+ ++ AG  FS 
Sbjct: 274 TVVLTRNGE-IYTMGSNSRGQLG---TGPSSSRGSNVPVLLQELNFIRMTRIRAG-QFSA 328

Query: 439 ALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWG 497
           +L+ D  ++ WG G       F TP  V  + + ++ D  +G S  L  L++   VY WG
Sbjct: 329 SLSVDNQLYLWGCGTFGE---FFTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWG 385

Query: 498 SNTMGQCG-QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            N MGQ G +D+       P +V  L+   V QI  G  + IA
Sbjct: 386 INDMGQLGLRDSIQRST--PHRVEALDGKRVTQITCGRDYVIA 426



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 15/225 (6%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
           I+ I++G F +  +D  G L + GKG  G L N + Q       +      +    C + 
Sbjct: 213 IKQIDSGAFHSGFVDEIGRLFMCGKGDQGQLGNMSYQDELSPFYISKIPEKIQEVACGDD 272

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           H + +T  GE+Y+ G    G+LG G + S+     +++  L   R+T++ AG   SA+++
Sbjct: 273 HTVVLTRNGEIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQ-FSASLS 331

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTL-VLSQDGHTVW 395
            D  LY WG G  G           TP  V  +   ++     G+S  L VL++ G +V+
Sbjct: 332 VDNQLYLWGCGTFGEF--------FTPHRVKSVQNLELADFQLGKSGFLTVLTRQG-SVY 382

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           + G  ++G+LG  D+ + +TP  +EAL   RV ++  G  + +AL
Sbjct: 383 TWGINDMGQLGLRDSIQRSTPHRVEALDGKRVTQITCGRDYVIAL 427


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 15/278 (5%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
            +KV+ WG N   Q+      K   P      S  N+  +  G    F +   G     G
Sbjct: 425 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 484

Query: 240 LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
               G+  LG+++ T+ P+P+++  L + +V          H   +T +G+V+SWG G+ 
Sbjct: 485 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 543

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           GKLGH + ++  +P+LI   L  KR+  ++ G SHSAA+T  G LYTWG G++GRLGHGD
Sbjct: 544 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 602

Query: 359 LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G G+ GKLG   +    
Sbjct: 603 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 661

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            P+ IE L    V ++  G  FS+ALT  G+V+ WG G
Sbjct: 662 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 119/233 (51%), Gaps = 14/233 (6%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHG---NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           +  VT EG+VY+ G   +G+LG G    T+   R    +     K+V  V +G  H+ A+
Sbjct: 471 LFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVA-VHSGGRHATAL 529

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
           T DG +++WGEGD G+LGH    +   P L+  L    +  ++CG SH+  L+  G  ++
Sbjct: 530 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE-LY 588

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLG- 452
           + G G  G+LGH D      PK+++ L   RV +V  G+  + ++ALT +GLVF WG G 
Sbjct: 589 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 648

Query: 453 ----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
                R  S   + P  +  L+   +  +  G    LAL++   V+ WG   +
Sbjct: 649 FGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGRL 701



 Score =  107 bits (268), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 15/265 (5%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           +V+ WG+ +  +LG G   S+ +       L    V QV+ G     AVT +G +Y  GE
Sbjct: 427 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 485

Query: 349 GDHGRLGHG-DLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLG 403
             +GRLG G    +   P  +T LS       AV  G  H   L+ DG  V+S G G+ G
Sbjct: 486 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK-VFSWGEGDDG 544

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSI 458
           KLGH        P++IEAL+  R+R +  G+S S ALT  G ++ WGLG         + 
Sbjct: 545 KLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT 604

Query: 459 SFHTPVLVTGLSSHQIVDVSIG--DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           +   P +V  L  H+++ V+ G  D+  LAL+    V++WG    G+ G+   S   + P
Sbjct: 605 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG-SEGCNIP 663

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
             +  L    V QI  G+ FS+A T
Sbjct: 664 QNIERLNGQGVCQIECGAQFSLALT 688



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 13/201 (6%)

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVG 375
           G  G  + + +AG   +A +     ++ WG  D  +LG         P+    LS  +V 
Sbjct: 405 GNSGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 462

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVC--A 432
            V+ G      ++ +G  V++ G    G+LG    +G V  P+ I AL  + V+KV   +
Sbjct: 463 QVAGGSKSLFAVTVEGK-VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHS 521

Query: 433 GTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G   + ALT DG VF WG G        S ++   P L+  L + +I D++ G SH  AL
Sbjct: 522 GGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 581

Query: 488 SQYNEVYAWGSNTMGQCGQDN 508
           +   E+Y WG    G+ G  +
Sbjct: 582 TSSGELYTWGLGEYGRLGHGD 602


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 179/365 (49%), Gaps = 28/365 (7%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRP---RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
              V+ WG N   Q+ D    +   P   ++Q L  ++  + AG +        G L  +G
Sbjct: 842  GTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGL-MDVTAMAAGGYHMAAAGQDGTLWTWG 900

Query: 245  ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
                G LG    + + LP +V     ++ ++       H+     +G +++WG+  +G+L
Sbjct: 901  LNSYGQLGGGPLSYRLLPVQVQ---GLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQL 957

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G G  LS R   + + GL    VT ++AG  H AA  +DG L+TWG   +G+LG G L  
Sbjct: 958  G-GGPLSYRLLPVQVQGLM--SVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQ 1014

Query: 362  RHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              TP  V    L+ V A++ G SHTL + QDG TVWS G    G+LG   T +  TP  +
Sbjct: 1015 SLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDG-TVWSWGGNAYGQLGDGTTAQSLTPVQV 1073

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH--TPVLVTGLSSHQI 474
            + L    V  + AG + +VAL  DG V+ WG    G      + H  TPV V GL+   +
Sbjct: 1074 QGLTG--VTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--V 1129

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + ++ G  H +AL Q   V+AWG N+ GQ G D  +     P +V GL  V    I AGS
Sbjct: 1130 IAIAAGSLHTVALRQDGTVWAWGRNSWGQLG-DGTTTHRATPVQVQGLTGVIA--IAAGS 1186

Query: 535  LFSIA 539
            L ++A
Sbjct: 1187 LHTVA 1191



 Score =  131 bits (329), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 195/397 (49%), Gaps = 43/397 (10%)

Query: 188  SKVYTWGCNLHHQILD----------EVRGKCSRPRLQSLPSNIRHIEA-GQFCTFLLDS 236
              ++TWG N + Q+            +V+G      + ++ +   H+ A GQ  T     
Sbjct: 894  GTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLW--- 947

Query: 237  TGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
            T GL  YG+  LG    + + LP +V     ++S++       H+     +G +++WG+ 
Sbjct: 948  TWGLNSYGQ--LGGGPLSYRLLPVQVQ---GLMSVTAMAAGGYHMAAAGQDGTLWTWGLN 1002

Query: 297  EHGKLGHGNTLSQRRP--KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             +G+LG G  LSQ     ++ + GL G  V  ++AG SH+ AV +DG +++WG   +G+L
Sbjct: 1003 SYGQLG-GGPLSQSLTPVQVQVQGLTG--VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQL 1059

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            G G      TP  V  L+ V A+S G++HT+ L +DG TVW+ G  + G+LG   T    
Sbjct: 1060 GDGTTAQSLTPVQVQGLTGVTAISAGDAHTVALRRDG-TVWAWGRNSWGQLGDGTTTHRA 1118

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH--TPVLVTGL 469
            TP  ++ L    V  + AG+  +VAL  DG V+ WG    G      + H  TPV V GL
Sbjct: 1119 TPVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL 1176

Query: 470  SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            +   ++ ++ G  H +AL Q   V+AWG N +GQ G D  +     P++V GL  V    
Sbjct: 1177 TG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLG-DGTTTRRLTPAQVQGLTGVTT-- 1231

Query: 530  ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFT 566
            I AG   + A  V    +A +  F  L   +   TFT
Sbjct: 1232 IAAGYFHTAA--VRQDGTAWTWGFN-LWGQLGDGTFT 1265



 Score =  126 bits (316), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 154/297 (51%), Gaps = 21/297 (7%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG   TT +  P +V   A  ++  +      H +  + +G V++WG    G+LG G ++
Sbjct: 105 LGDGTTTRRFSPVQVMTGATAIAAGIY-----HTVAASQDGTVWTWGRNSSGQLGDGTSI 159

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  P  + G L G  VT V+AG +HSAA+ + G ++TWG+   G+LG G    R TP  
Sbjct: 160 QRFSPVQVQG-LTG--VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQ 216

Query: 368 VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
           V  L+ V A+S  +S T+ L QDG TVW+ G+ + G+LG   T    TP  ++ L    V
Sbjct: 217 VQGLTGVIAISANDSETVALRQDG-TVWAWGNNSSGQLGDGTTTVRFTP--VQVLGLTGV 273

Query: 428 RKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDS 482
             + AG  F+VAL  DG ++ WG   R      ++   + P  V GL+   +  ++    
Sbjct: 274 TAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTG--VTAIAASGI 331

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           H +AL Q   ++AWG+N+ GQ G D  +     P +V GL  V    I AG L+++A
Sbjct: 332 HTVALRQDGTLWAWGNNSSGQLG-DGTTTVRFTPVQVQGLTGVTA--IAAGYLYTVA 385



 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 166/349 (47%), Gaps = 22/349 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+TWG NL  Q+ D    +   P ++Q L + +  I A    T  L   G +  +G  
Sbjct: 190 GTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL-TGVIAISANDSETVALRQDGTVWAWGNN 248

Query: 246 --GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG   TT++  P +V     +  ++         + +  +G +++WG    G+LG+
Sbjct: 249 SSGQLGDGTTTVRFTPVQV---LGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGN 305

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T    RP+ + G L G  VT ++A   H+ A+ +DG L+ WG    G+LG G    R 
Sbjct: 306 GTTFGSYRPEQVQG-LTG--VTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRF 362

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           TP  V  L+ V A++ G  +T+   QDG TVW+ G    G+LG   T +  TP  ++ L 
Sbjct: 363 TPVQVQGLTGVTAIAAGYLYTVASKQDG-TVWAWGDNEWGQLGDGTTTRRLTPVQVQGLT 421

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS----SSIS-FHTPVLVTGLSSHQIVDVS 478
              V  + AG  ++VA   DG V+ WG   RS     ++S  HTP  V GL    I  ++
Sbjct: 422 G--VTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEG--ITAIA 477

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCV 527
             +   +A+ Q   V+AWG N  GQ G D  +     P +V GL  V  
Sbjct: 478 ASNLLTVAVRQDGTVWAWGDNARGQLG-DGTTTRRLTPVQVQGLAGVTA 525



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 138/266 (51%), Gaps = 20/266 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L V  +G V++WG  + G+LG G T  +  P  +M G      T ++AG  H+ A ++
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTG-----ATAIAAGIYHTVAASQ 138

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++TWG    G+LG G    R +P  V  L+ V AV+ G +H+  L Q G TVW+ G 
Sbjct: 139 DGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTGVTAVAAGRNHSAALGQGG-TVWTWGD 197

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
             +G+LG   + +  TP  ++ L    V  + A  S +VAL  DG V+ WG      LG 
Sbjct: 198 NLVGQLGDGTSTQRLTPVQVQGLTG--VIAISANDSETVALRQDGTVWAWGNNSSGQLGD 255

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
            ++++ F TPV V GL+   +  ++ G    +AL Q   ++AWGSN+ GQ G        
Sbjct: 256 GTTTVRF-TPVQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSY 312

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
            +P +V GL  V    I A  + ++A
Sbjct: 313 -RPEQVQGLTGVTA--IAASGIHTVA 335



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 160/342 (46%), Gaps = 26/342 (7%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
              V++WG N + Q+ D    +   P ++Q L + +  I AG   T  L   G +  +G+ 
Sbjct: 1046 GTVWSWGGNAYGQLGDGTTAQSLTPVQVQGL-TGVTAISAGDAHTVALRRDGTVWAWGRN 1104

Query: 246  --GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              G LG   TT +  P +V     +++++       H + +  +G V++WG    G+LG 
Sbjct: 1105 SWGQLGDGTTTHRATPVQVQGLTGVIAIAAGSL---HTVALRQDGTVWAWGRNSWGQLGD 1161

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            G T  +  P  + G L G  V  ++AG  H+ A+ +DG ++ WG  D G+LG G    R 
Sbjct: 1162 GTTTHRATPVQVQG-LTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRL 1218

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            TP  V  L+ V  ++ G  HT  + QDG T W+ G    G+LG        TP  ++ L 
Sbjct: 1219 TPAQVQGLTGVTTIAAGYFHTAAVRQDG-TAWTWGFNLWGQLGDGTFTDRATPVQVQGLT 1277

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
               V  + AG + +V +  DG V+ WG      LG   SS    TPV V  L+      +
Sbjct: 1278 G--VSALAAGYAHTVVVGEDGTVWAWGNNSGTQLG-NGSSTDRSTPVQVEALTG--AFSL 1332

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
            + G  H +A+S     + WG N +GQ G        D+P+ V
Sbjct: 1333 AAGRFHTVAMSPDGAGWGWGRNNLGQVGD---GTTADRPTPV 1371



 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 174/357 (48%), Gaps = 24/357 (6%)

Query: 103  PLTKSLPPYNAALNLLEEVLRPATHYQVDL-IRSACLVYLILVTLADDNIKPLGDRKSSN 161
            PL++SL P    +  L  V   A  +   L +R    V+    +   +    LGD  ++ 
Sbjct: 1011 PLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVW----SWGGNAYGQLGDGTTAQ 1066

Query: 162  SNTDIDSTSTPKLTY-NIGDTDISVA---HSKVYTWGCNLHHQILDEVRGKCSRP-RLQS 216
            S T +       +T  + GD   +VA      V+ WG N   Q+ D      + P ++Q 
Sbjct: 1067 SLTPVQVQGLTGVTAISAGDAH-TVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQG 1125

Query: 217  LPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSV 273
            L + +  I AG   T  L   G +  +G+   G LG   TT +  P +V     +++++ 
Sbjct: 1126 L-TGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAA 1184

Query: 274  SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
                  H + +  +G V++WG  + G+LG G T  +  P  + G L G  VT ++AG+ H
Sbjct: 1185 GSL---HTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQG-LTG--VTTIAAGYFH 1238

Query: 334  SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
            +AAV +DG  +TWG    G+LG G    R TP  V  L+ V A++ G +HT+V+ +DG T
Sbjct: 1239 TAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSALAAGYAHTVVVGEDG-T 1297

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            VW+ G+ +  +LG+  +   +TP  +EAL       + AG   +VA++ DG  + WG
Sbjct: 1298 VWAWGNNSGTQLGNGSSTDRSTPVQVEALTG--AFSLAAGRFHTVAMSPDGAGWGWG 1352



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 172/399 (43%), Gaps = 68/399 (17%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
             V+ WG N   Q+ D    +   P ++Q L + +  + A  +    +   G +  +G G
Sbjct: 490 GTVWAWGDNARGQLGDGTTTRRLTPVQVQGL-AGVTAVAASDYHLVAVRQDGTVWAWGVG 548

Query: 247 -WLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            W  L + T   + +  P++   +  ++       H + +  +G V++WG   +G+LG G
Sbjct: 549 FWGQLGDGT--GMDRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDG 606

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T     P  + G + G     ++AG SH+ A+ +DG ++TWG    G+LG G    RH+
Sbjct: 607 TTAGHLTPVQVPG-VTG--AVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHS 663

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE---- 420
           P  V  L+DV A++    HT+ + QDG TVW+ G  + G+LG   T +  TP  +     
Sbjct: 664 PVQVQGLADVIAIATNNGHTVAVRQDG-TVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTD 722

Query: 421 ------------ALRKFR--------------------------------VRKVCAGTSF 436
                       A+R+ R                                V  + AG   
Sbjct: 723 ATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDVTAMAAGGYH 782

Query: 437 SVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
             A   DG ++ WGL     L    +S+   PV V GL+S     ++ GDSH +A+ Q  
Sbjct: 783 MAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDG 842

Query: 492 EVYAWGSNTMGQCGQDNFSN---PVDQPSKVVGLEDVCV 527
            V+AWGSN  GQ G    +    PV    +V GL DV  
Sbjct: 843 TVWAWGSNFSGQLGDGTTAQSLTPVQ--VQVQGLMDVTA 879



 Score = 99.8 bits (247), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 15/213 (7%)

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG 391
           +H+ AV +DG ++ WG  D G+LG G    R +P  V  ++   A++ G  HT+  SQDG
Sbjct: 83  NHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV--MTGATAIAAGIYHTVAASQDG 140

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
            TVW+ G  + G+LG   + +  +P  ++ L    V  V AG + S AL   G V+ WG 
Sbjct: 141 -TVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG--VTAVAAGRNHSAALGQGGTVWTWGD 197

Query: 452 GL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            L       +S    TPV V GL+   ++ +S  DS  +AL Q   V+AWG+N+ GQ G 
Sbjct: 198 NLVGQLGDGTSTQRLTPVQVQGLTG--VIAISANDSETVALRQDGTVWAWGNNSSGQLG- 254

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           D  +     P +V+GL  V    I AG  F++A
Sbjct: 255 DGTTTVRFTPVQVLGLTGVTA--IAAGGGFAVA 285


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  141 bits (355), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 175/369 (47%), Gaps = 28/369 (7%)

Query: 215 QSLPSNI----RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           + L SNI    +HI  G   + ++   G +  +G+   G LGL        P+ V   AA
Sbjct: 268 KPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAA 327

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++ +  C E H   VT +GE+Y+WG G H  G LG+G  +S   PK I G L G +V 
Sbjct: 328 -TTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVA 386

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            V+ G  H+A ++  G L+T+G+G  G LGHGD KS   P  V  L+ +   AV+CG  H
Sbjct: 387 YVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWH 446

Query: 384 T-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T     ++++Q   ++     ++ G G+  +LGH D      P  + AL  +   K+  G
Sbjct: 447 TAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACG 506

Query: 434 TSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLALS 488
            S ++ LT  G VF  G  +     + H     P LV   L      +V+ G  HV+ L+
Sbjct: 507 HSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLT 566

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS +S A  +  S S 
Sbjct: 567 SKNEVYTWGKGANGRLGHGDVED-RKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSG 625

Query: 549 LSSAFTPLC 557
              +    C
Sbjct: 626 TEQSQCSAC 634


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 187/404 (46%), Gaps = 38/404 (9%)

Query: 166  IDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE 225
            I  +STP  +      D   +   VY WG      I  +    C   ++  +   +RHI 
Sbjct: 1036 ISVSSTPSCSTGTSGPDDIESLGDVYVWGEVCSDGISQDGTVNCRTVKID-IACGVRHIA 1094

Query: 226  AGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL 282
                   L+   G +  +G+   G LG         PK V    A+ ++    C E H  
Sbjct: 1095 -------LVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEF-LALTNIDFVACGEYHTC 1146

Query: 283  TVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
             V++ G++++WG G H  G LGHG+ LS   PK + G + G +V  V+ G  HSA  T +
Sbjct: 1147 AVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATAN 1206

Query: 341  GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL----VLSQDGHTV 394
            G L+T+G+G  G LGHGD +S   P  V  LS +    V+CG  HT+    V++Q G ++
Sbjct: 1207 GKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVMNQTGTSM 1266

Query: 395  -----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
                 ++ G G+  +LGH +      P  + +L  +  +++  G + +VALT  G VF  
Sbjct: 1267 SSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTSGHVFTM 1326

Query: 450  G----LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
            G      L SS+     P LV   L    + ++S GD HV  L+  +EV+ WG  + G+ 
Sbjct: 1327 GGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRL 1386

Query: 505  GQDNFSNPVDQPSKVVGLEDVCVRQI-------CAGSLFSIAYT 541
            G  +  +    P+ V  L++  V+ I       C+G   +  +T
Sbjct: 1387 GHGDKEDR-KTPTLVEALKERHVKSISCADQSVCSGCRQAFGFT 1429


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 163/338 (48%), Gaps = 23/338 (6%)

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNT 306
           G   +  QP   R+    +I ++    C E H   +T+ G++Y+WG G H  G LGHG+ 
Sbjct: 296 GAGTSIFQP---RLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSN 352

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +S   PK + G L G +V+ VS G  H+A +T  G LYT+G+G  G LGHG+ ++   P 
Sbjct: 353 VSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPK 412

Query: 367 LVTELSDVG--AVSCGESHT-----LVLSQDGHT---VWSMGSGNLGKLGHEDTGKVTTP 416
            V  L  +   +VSCG  HT     ++++Q   +   +++ G G+  +LGH D      P
Sbjct: 413 EVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP 472

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLV-TGLSS 471
             + +L  +   K   G + ++ LT  G +F  G      L + +     P LV   L  
Sbjct: 473 TCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGG 532

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +V+V+ G  HV  L+Q  EVY WG    G+ G  + ++    P+ V  L D  V++I 
Sbjct: 533 GGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIAD-RKTPTFVEALRDRSVKRIA 591

Query: 532 AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            GS F+ A     S S +  +    C   +P  FT  R
Sbjct: 592 CGSGFTAAICQHKSVSGMEQSQCSSC--RQPFGFTRKR 627



 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 156/345 (45%), Gaps = 29/345 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
            ++V+TWG     ++         +PRL +SL   N+  I  G+F T  + +TG L  +G
Sbjct: 279 QAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWG 338

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PLE   + +S   C   H   +TS G++Y++G G 
Sbjct: 339 DGTHNAGLLGHGSNVSHWIPKRVSGPLEG--LQVSAVSCGTWHTALITSSGKLYTFGDGT 396

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------DGLLYTWGE 348
            G LGHGN  +   PK +   L G R   VS G  H+AAV E          G L+TWG+
Sbjct: 397 FGVLGHGNRETISYPKEVE-SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGD 455

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           GD  RLGHGD  S+  PT V  L D       CG + T+ L+  GH +++ GS   G+LG
Sbjct: 456 GDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGH-IFTAGSSVYGQLG 514

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS-FH 461
           + +        V E L    V +V  G      LT  G V+ WG G    L    I+   
Sbjct: 515 NPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRK 574

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           TP  V  L    +  ++ G     A+ Q+  V     +    C Q
Sbjct: 575 TPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSCRQ 619



 Score = 77.4 bits (189), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 106/239 (44%), Gaps = 23/239 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V+ V+ G  H+A VT    ++TWGE   GRLGHG   S   P LV  LS  +V  ++CGE
Sbjct: 263 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGE 322

Query: 382 SHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            HT  ++  G    W  G+ N G LGH        PK +   L   +V  V  GT  +  
Sbjct: 323 FHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTAL 382

Query: 440 LTWDGLVFWWGLGL-------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-----L 487
           +T  G ++ +G G           +IS+  P  V  L   + + VS G  H  A     +
Sbjct: 383 ITSSGKLYTFGDGTFGVLGHGNRETISY--PKEVESLKGLRTISVSCGVWHTAAVVEVIM 440

Query: 488 SQYN----EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           +Q N    +++ WG     + G  + S+ + +P+ V  L D    +   G   +I  T 
Sbjct: 441 AQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCGHTLTIGLTT 498


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  140 bits (352), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 165/353 (46%), Gaps = 28/353 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   ++  ++  I  G     L+   G L  +G+   G LG  +    IQP   R+   
Sbjct: 271 RPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQP---RLVEA 327

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKR 323
            A  ++    C E H   VT  GE+Y+WG G H  G LGHG  +S   PK I G L G +
Sbjct: 328 MASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQ 387

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGE 381
           V  V+ G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  LS +   AV+CG 
Sbjct: 388 VALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGV 447

Query: 382 SHT-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            HT     ++++Q   +V     ++ G G+  +LGH D      P  +  L      ++ 
Sbjct: 448 WHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIA 507

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +V LT  G VF  G      L +       P LV   L+   + +++ G  HV  
Sbjct: 508 CGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEEIACGAYHVAV 567

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           L+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS +S A
Sbjct: 568 LTSKNEVYTWGKGANGRLGHGDVED-RKTPTLVEALKDRHVKYIACGSNYSAA 619



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 140/327 (42%), Gaps = 76/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
             +++TWG     ++   V     +PRL +++ S  +  +  G+F T  +   G L  +G
Sbjct: 297 QGELFTWGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWG 356

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG        +PKR+  PLE   V+L    C   H   +TS G+++++G G 
Sbjct: 357 DGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVT--CGPWHTALITSTGQLFTFGDGT 414

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  +   P+ +   L G R   V+ G  H+AAV E              L+TW
Sbjct: 415 FGVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLFTW 473

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDG------------- 391
           G+GD  RLGHGD  +R  PT V+ L  S+   ++CG S T+ L+  G             
Sbjct: 474 GDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACGHSLTVGLTTSGEVFTMGSSVYGQL 533

Query: 392 --------------------------------------HTVWSMGSGNLGKLGHEDTGKV 413
                                                 + V++ G G  G+LGH D    
Sbjct: 534 GNPQSDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDR 593

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
            TP ++EAL+   V+ +  G+++S A+
Sbjct: 594 KTPTLVEALKDRHVKYIACGSNYSAAI 620


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  140 bits (352), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 179/361 (49%), Gaps = 21/361 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--- 244
             V+ WG N+  Q+ D  R     P      S +  I  G+  TF +   G +  +G   
Sbjct: 276 GTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAIAEGRRHTFAVRQDGTVWAWGLNF 335

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG    + +  P +VP    + S++     + H L V  +G V++WG    G+LG G
Sbjct: 336 WGQLGDGTRSDRLTPVQVP---DLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDG 392

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T + R   + + GL G  VT ++AG SH+ A+ +DG ++ WG+   G+LG G    R T
Sbjct: 393 -TYTDRLTPVQVPGLTG--VTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLT 449

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V +L+ V A++ G+ HTL + QDG TV + G    G+LG   + +  +P ++  L  
Sbjct: 450 PVQVPDLTSVTAIAAGDYHTLAVRQDG-TVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTG 508

Query: 425 FRV-RKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVS 478
             V   + AG S +VA+  DG V+ WGL         ++I    PV + GL+   +  ++
Sbjct: 509 VTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAG--VTAIA 566

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G +H LA  Q   V++WG+N+ GQ G    ++ +  P +V GL  V    + AG   S+
Sbjct: 567 AGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRL-SPVQVPGLTGVSA--MAAGDAHSV 623

Query: 539 A 539
           A
Sbjct: 624 A 624



 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 173/364 (47%), Gaps = 30/364 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
             V+ WG N   Q+ D  R     P      + +  I AG+  TF +   G +  +G   
Sbjct: 126 GTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDGTVWAWGDNA 185

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG    T +  P +VP    +  ++     + H L V  +G V++WG    G+LG G
Sbjct: 186 WGQLGDGTRTNRLTPVQVP---GLTGVTAIAAGDYHTLAVRQDGTVWAWGNNALGQLGDG 242

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T ++R   + + GL G  VT +SAG SH+ AV +DG ++ WG+   G+LG G    R T
Sbjct: 243 -TYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLT 299

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V  LS V A++ G  HT  + QDG TVW+ G    G+LG        TP  +  L  
Sbjct: 300 PVQVPGLSGVTAIAEGRRHTFAVRQDG-TVWAWGLNFWGQLGDGTRSDRLTPVQVPDLTS 358

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V  + AG   ++A+  DG V+ WG      LG  + +    TPV V GL+   +  ++
Sbjct: 359 --VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRL-TPVQVPGLTG--VTAIA 413

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQPSKVVGLEDVCVRQICAGSL 535
            G+SH +A+ Q   V+AWG N  GQ G   +++   PV  P      +   V  I AG  
Sbjct: 414 AGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVP------DLTSVTAIAAGDY 467

Query: 536 FSIA 539
            ++A
Sbjct: 468 HTLA 471



 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 174/362 (48%), Gaps = 23/362 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG-----GLLV 242
             V+ WG N+  Q+ D        P      +++  I AG + T  +   G     G   
Sbjct: 426 GTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFNA 485

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG   ++  P P  VP    +   +     ++H + V  +G V++WG+   G+LG
Sbjct: 486 YGQ--LGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLG 543

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T+ +R P  I G L G  VT ++AG +H+ A  +DG +++WG   +G+LG G    R
Sbjct: 544 DGATIDRRIPVQIPG-LAG--VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHR 600

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            +P  V  L+ V A++ G++H++ L QDG TV + G  + G+LG   T    TP  +  L
Sbjct: 601 LSPVQVPGLTGVSAMAAGDAHSVALLQDG-TVSAWGRNSWGQLGDGTTAARLTPVQVHGL 659

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH--TPVLVTGLSSHQIVDV 477
               V  V AG+  +VAL  DG V+ WG   LG      +     PV V GL+   +  +
Sbjct: 660 TG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD--VTAI 715

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           + G  H +A+ Q   V+AWG N  GQ G D  S     P +V   E   V  + AG   +
Sbjct: 716 AAGYFHTVAVRQDGTVWAWGYNLWGQLG-DGSSTARSTPVQV--QELTGVSALAAGYAHT 772

Query: 538 IA 539
           +A
Sbjct: 773 VA 774



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 158/317 (49%), Gaps = 20/317 (6%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           + +    AG++ T  +   G    +G    G LG    T +  P +VP    + +++  +
Sbjct: 7   TGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTAVAAGR 66

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
               H   V  +G V++WG+   G+LG G T ++R   + + GL G  VT ++AG  H+ 
Sbjct: 67  H---HTFAVRQDGTVWAWGLNVWGQLGDG-THTERHTPVQVPGLTG--VTAIAAGRRHTF 120

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           AV++DG ++ WG+ D G+LG G    RHTP  + EL+ V A++ G  HT  + QDG TVW
Sbjct: 121 AVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAIAAGRRHTFAVRQDG-TVW 179

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LG 452
           + G    G+LG        TP  +  L    V  + AG   ++A+  DG V+ WG   LG
Sbjct: 180 AWGDNAWGQLGDGTRTNRLTPVQVPGLTG--VTAIAAGDYHTLAVRQDGTVWAWGNNALG 237

Query: 453 LRSSSISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                      TPV V GL+   +  +S G+SH +A+ Q   V+AWG N  GQ G    +
Sbjct: 238 QLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRT 295

Query: 511 NPVDQPSKVVGLEDVCV 527
           + +  P +V GL  V  
Sbjct: 296 DRL-TPVQVPGLSGVTA 311



 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 177/366 (48%), Gaps = 31/366 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI---RHIEAGQFCTFLLDSTGGLLVYG 244
             V  WG N + Q+ D    +   P +    + +     + AG   T  +   G +  +G
Sbjct: 476 GTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWG 535

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG   T  + +P ++P  A + +++      AH L    +G V+SWG   +G+L
Sbjct: 536 LNASGQLGDGATIDRRIPVQIPGLAGVTAIA---AGSAHTLAAGQDGAVWSWGANSYGQL 592

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +  P  + G L G  V+ ++AG +HS A+ +DG +  WG    G+LG G   +
Sbjct: 593 GDGTTTHRLSPVQVPG-LTG--VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAA 649

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R TP  V  L+ V AV+ G  HT+ L QDG TVW+ G  +LG+LG   T +   P  ++ 
Sbjct: 650 RLTPVQVHGLTGVTAVAAGSLHTVALRQDG-TVWAWGYNDLGQLGDGTTTRRLAPVQVQG 708

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLV---TGLSSHQ 473
           L    V  + AG   +VA+  DG V+ WG  L       SS +  TPV V   TG+S+  
Sbjct: 709 LTD--VTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTGVSA-- 764

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
              ++ G +H +A+ Q   V+AWG+N+  Q G  + ++    P  V GL  V    + AG
Sbjct: 765 ---LAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRY-TPVWVEGLTGVSA--LTAG 818

Query: 534 SLFSIA 539
              + A
Sbjct: 819 RFHTAA 824



 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 163/341 (47%), Gaps = 28/341 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK 245
             V+ WG N   Q+ D       R     +P  + +  I AG   T      G +  +G 
Sbjct: 529 GTVWAWGLNASGQLGDGA--TIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGA 586

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   TT +  P +VP    +  +S     +AH + +  +G V +WG    G+LG
Sbjct: 587 NSYGQLGDGTTTHRLSPVQVP---GLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLG 643

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T ++  P  + G L G  VT V+AG  H+ A+ +DG ++ WG  D G+LG G    R
Sbjct: 644 DGTTAARLTPVQVHG-LTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRR 700

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  V  L+DV A++ G  HT+ + QDG TVW+ G    G+LG   +   +TP  ++ L
Sbjct: 701 LAPVQVQGLTDVTAIAAGYFHTVAVRQDG-TVWAWGYNLWGQLGDGSSTARSTPVQVQEL 759

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               V  + AG + +VA+  DG V+ WG      LG   SS   +TPV V GL+   +  
Sbjct: 760 TG--VSALAAGYAHTVAVKQDGTVWAWGNNSGTQLG-NGSSTDRYTPVWVEGLTG--VSA 814

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVD 514
           ++ G  H  A+S     +AWG N  GQ G    ++   PVD
Sbjct: 815 LTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPVD 855



 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 22/281 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
            +  ++ +   E H + V  +G  ++WG    G+LG G T + R   + + GL G  VT 
Sbjct: 5   GLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDG-TRTDRLTPVQVPGLTG--VTA 61

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           V+AG  H+ AV +DG ++ WG    G+LG G    RHTP  V  L+ V A++ G  HT  
Sbjct: 62  VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTGVTAIAAGRRHTFA 121

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           +SQDG TVW+ G  + G+LG        TP  +  L    V  + AG   + A+  DG V
Sbjct: 122 VSQDG-TVWAWGDNDWGQLGDGTRADRHTPVQLPELTG--VTAIAAGRRHTFAVRQDGTV 178

Query: 447 FWW--------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           + W        G G R++ +   TPV V GL+   +  ++ GD H LA+ Q   V+AWG+
Sbjct: 179 WAWGDNAWGQLGDGTRTNRL---TPVQVPGLTG--VTAIAAGDYHTLAVRQDGTVWAWGN 233

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           N +GQ G   ++  +  P +V GL  V    I AG   ++A
Sbjct: 234 NALGQLGDGTYTERL-TPVQVPGLTGVTA--ISAGESHTVA 271



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 82/180 (45%), Gaps = 19/180 (10%)

Query: 368 VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
           V  L+ V A + GE HT+ + QDG T W+ G+   G+LG        TP  +  L    V
Sbjct: 3   VPGLTGVTATTAGEYHTVAVRQDG-TAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTG--V 59

Query: 428 RKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
             V AG   + A+  DG V+ WGL +       +    HTPV V GL+   +  ++ G  
Sbjct: 60  TAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTG--VTAIAAGRR 117

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           H  A+SQ   V+AWG N  GQ G    ++   PV  P      E   V  I AG   + A
Sbjct: 118 HTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLP------ELTGVTAIAAGRRHTFA 171


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  140 bits (352), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 177/360 (49%), Gaps = 38/360 (10%)

Query: 201 ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK--GWLGLANTTIQP 257
           I  E R   +R R +S  + +I  +E  Q C         + ++G+  GW    N+ + P
Sbjct: 180 IQQETRHNVNRQRTESDGTHDIASMELDQKC-------ARVFLWGRPPGW-SHTNSLLTP 231

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM- 316
               V    +I  ++   C   H+L ++S G+VYS    +H       T   + P+L+  
Sbjct: 232 QKVDVLPGQSIAEIA---CGGNHILYLSSAGDVYS--SEDHAISTTEPTNMLQTPQLVKE 286

Query: 317 ----GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL- 371
                 L+ + +  ++ G  HS A+T  G +Y+WG G+ GRLGHG+++ R+ P  +  L 
Sbjct: 287 LTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALL 346

Query: 372 -SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE--ALRKFRVR 428
              +  VSCG SHT V+S D + V++ G G  G+LG  DT    TP+ +     RK R+ 
Sbjct: 347 RHRIEYVSCGGSHTAVVS-DQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRII 405

Query: 429 KVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
           KV  G +F++AL+ +G VF WG       GL        +P L+  L  ++IVDV+ G +
Sbjct: 406 KVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVACGYT 465

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNP----VDQPSKVVGLEDVCVRQICAGSLFSI 538
           H LAL+  +EV +WG    GQ G+     P    +DQ   +   E    ++I  G+  SI
Sbjct: 466 HSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQ--SLFACEGGHPQRIYCGAFHSI 523



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 30/244 (12%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA-- 376
           L G+ + +++ G +H   ++  G +Y+    DH            TP LV EL+   A  
Sbjct: 237 LPGQSIAEIACGGNHILYLSSAGDVYS--SEDHAISTTEPTNMLQTPQLVKELTLEKALH 294

Query: 377 ------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
                 ++CG  H++ L+  G  V+S GSG  G+LGH +      P+ I AL + R+  V
Sbjct: 295 RRPIIHIACGAKHSVALTSAGE-VYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYV 353

Query: 431 CAGTSFSVALTWDGLVFWWGLGLRSSSISF------HTP--VLVTGLSSHQIVDVSIGDS 482
             G S +  ++   LVF +G G R+  +         TP  V   G    +I+ V  G +
Sbjct: 354 SCGGSHTAVVSDQNLVFTFGRG-RNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWN 412

Query: 483 HVLALSQYNEVYAWGSNTMGQCG-----QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
             +ALS    V++WG  + GQCG     QD  S     P  +  L D  +  +  G   S
Sbjct: 413 FTIALSLEGRVFSWGKQSEGQCGLGFCDQDELS-----PCLIEKLLDNRIVDVACGYTHS 467

Query: 538 IAYT 541
           +A T
Sbjct: 468 LALT 471



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 19/270 (7%)

Query: 189 KVYTWGCNLHHQI-LDEVRGK-CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +VY+WG     ++   E+R +   R  +  L   I ++  G   T ++     +  +G+G
Sbjct: 316 EVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSDQNLVFTFGRG 375

Query: 247 W---LGLANTTIQPLPKRVPL----EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
               LGL +T     P+ VP     +  I+ +    C     + ++ EG V+SWG    G
Sbjct: 376 RNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVV---CGWNFTIALSLEGRVFSWGKQSEG 432

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           + G G          ++  L   R+  V+ G++HS A+T    + +WG G++G+LG G +
Sbjct: 433 QCGLGFCDQDELSPCLIEKLLDNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIV 492

Query: 360 -----KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
                +S        E      + CG  H+ +++     +++ G  + G  G   T    
Sbjct: 493 YQPSPESIDQSLFACEGGHPQRIYCGAFHS-IITAGSKILYAWGLNSYGACGLGHTLNRD 551

Query: 415 TPKVIEALRKFRVRKV-CAGTSFSVALTWD 443
            P+  +         V C G  +++AL  D
Sbjct: 552 IPERNDFFANIDTDVVLCCGHKYTIALEVD 581


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  140 bits (352), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 192/394 (48%), Gaps = 35/394 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S V  WG + + Q+          P+L +SL S   I+ +  G   + ++  +G L+V+G
Sbjct: 8   SGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 245 KGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G    LGL +     +P+ +     ++++S   CS+ H   +  +G +Y+WG  + GKL
Sbjct: 68  YGGCGQLGLGDLKDIVIPRVMTSIKNVINVS---CSDRHSAAILEDGRLYTWGCNKSGKL 124

Query: 302 GHGNTLSQRR------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           G G+            P+L+   L  ++V +VS G  H+A +T+    YTWG G  GRLG
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEK-LLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLG 183

Query: 356 HGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           HGD    +TP L+  L+   V  + CG  HT +L  +G  V+  G G  GKLG      +
Sbjct: 184 HGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNG-KVYFCGGGAFGKLGFGSKEDI 242

Query: 414 TTPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI------SFHTPVLV 466
             PK+++ +L    +++V  G   S  +T  G V+ WG G R   I         +P LV
Sbjct: 243 YIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLV 302

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWG-SNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
             L+S   V++S G SH + +S   +VYAWG +  +G    D  S P D P+    L++ 
Sbjct: 303 EKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRNLGHGVID--SKPND-PTLHPILQNK 359

Query: 526 CVRQICAGSLFSIAYT-----VPPSNSALSSAFT 554
            + Q+  G   +IA +     +   NS+L+S + 
Sbjct: 360 NIVQVSCGKTHTIALSDIELLIDKVNSSLTSNYN 393


>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
 gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
          Length = 390

 Score =  140 bits (352), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 163/305 (53%), Gaps = 20/305 (6%)

Query: 245 KGWLGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           +G LG      + LP+   +P  ++  S+S   C  AHV+ +TS G V++WG G  G+LG
Sbjct: 24  EGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGTTGQLG 83

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG  L+   PK +   L    +T VSAG SHS  V++ GLL+T G+G  G+LG G+ +S+
Sbjct: 84  HGEMLNSLHPKPVS-SLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQLGQGNYRSQ 142

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKV 418
            TP  V   ++  V  ++CG  H+LVL  +G+ V+  GSG  G+LG   + T  +  P+V
Sbjct: 143 STPVKVDYFANNFVNQIACGMRHSLVL-LNGNQVYGFGSGKRGQLGISRDKTKSINLPQV 201

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVS 478
              L   ++  + A    S A++ DG ++ WG G   +S + + P L   LSS +    +
Sbjct: 202 TCGLEDVQIVSISANGDHSAAISADGHLYTWGRGFAGASDA-NFPQLS--LSSLRCTKAA 258

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFS----NPVDQP----SKVVGLEDVCVRQ 529
           +G +H L L+   EV   G N  G  C  +  S     P D P    ++V+GL+ V V +
Sbjct: 259 LGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPGTALNEVIGLDGVKVVK 318

Query: 530 ICAGS 534
           I AG+
Sbjct: 319 IAAGA 323



 Score = 47.0 bits (110), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 39/174 (22%)

Query: 234 LDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-----HVLTVTSEG 288
           + + G L  +G+G+ G ++     L           SLS  +C++A     H L +T + 
Sbjct: 223 ISADGHLYTWGRGFAGASDANFPQL-----------SLSSLRCTKAALGWNHGLLLTGDE 271

Query: 289 EVYSWGVGEHGKLGHGNTLS--QRRPKLIMG-------GLYGKRVTQVSAGHSHSAAVTE 339
           EV   G   HG L     +S  + RP+   G       GL G +V +++AG  HSA    
Sbjct: 272 EVLMLGGNYHGVLCDLEKMSAVKHRPEDSPGTALNEVIGLDGVKVVKIAAGAEHSA---- 327

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG------AVSCGESHTLVL 387
                TWG G+HG+LG G+   +  P  V+ + D+        V CG   T  +
Sbjct: 328 ----LTWGWGEHGQLGLGNTNDQTIPQTVSLIPDIQNKEASLNVYCGSGFTFAI 377


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  140 bits (352), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 180/391 (46%), Gaps = 50/391 (12%)

Query: 190 VYTWGCNLHHQIL----DEVRGKCSRPRL-----QSLPSNI----RHIEAGQFCTFLLDS 236
           VY WG  +   ++    D+    CS PR      + L SN+      I  G     L+  
Sbjct: 301 VYIWGEVISENVVKVGADKNVSYCS-PRTDILLPKPLESNVVLDVLQIACGVKHAALVTR 359

Query: 237 TGGLLVYGK---GWLG--LANTTIQPLPKRVPLEAAIVSLSVS--KCSEAHVLTVTSEGE 289
            G +  +G+   G LG  +    +QP      L  A+ S +V    C E H   VT  GE
Sbjct: 360 QGEMFTWGEESGGRLGHGVGKNVVQPC-----LVEALASSTVDFVACGEFHTCAVTMAGE 414

Query: 290 VYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +Y+WG G H  G LGHG  +S   PK I G L G +V  V+ G  H+A +T  G L+T+G
Sbjct: 415 IYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFG 474

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHT-----LVLSQDGHTV-----W 395
           +G  G LGHGD ++   P  V  LS +  VS  CG  HT     ++++Q   ++     +
Sbjct: 475 DGTFGVLGHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLF 534

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
           + G G+  +LGH D      P  I AL  +   ++  G S +V LT  G VF  G     
Sbjct: 535 TWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYG 594

Query: 451 -LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
            LG   S      P LV   L+   + +++ G  HV  L+  NEVY WG    G+ G  +
Sbjct: 595 QLGNPQSDGKL--PCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGD 652

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +    P+ V  L+D  V+ I  GS +S A
Sbjct: 653 VED-RKTPTLVEALKDRHVKYIACGSNYSAA 682



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 40/281 (14%)

Query: 189 KVYTWGCNLH------------HQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDS 236
           ++YTWG   H            H I   + G      L+ L   +  +  G + T L+ S
Sbjct: 414 EIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGP-----LEGL--QVAFVTCGPWHTALITS 466

Query: 237 TGGLLVYGKGWLGL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT-------- 285
           TG L  +G G  G+    +      P+ V   + + ++SV+ C   H   +         
Sbjct: 467 TGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSVA-CGVWHTAAIVEVIVTQSS 525

Query: 286 ---SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
              S G++++WG G+  +LGHG+  ++  P  I   L      +++ GHS +  +T  G 
Sbjct: 526 ASISSGKLFTWGDGDKNRLGHGDKDARLEPTCI-SALIDYNFHRIACGHSLTVGLTTSGR 584

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           ++T G   +G+LG+     +  P LV +      V  ++CG  H  VL+   + V++ G 
Sbjct: 585 VFTMGSTVYGQLGNPQSDGK-LPCLVEDKLAGECVEEIACGAYHVTVLTSR-NEVYTWGK 642

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           G  G+LGH D     TP ++EAL+   V+ +  G+++S A+
Sbjct: 643 GANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAI 683


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  140 bits (352), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 170/372 (45%), Gaps = 27/372 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           +++ I  G     L    G +  +G+   G LG    T    PK V    A+ ++    C
Sbjct: 276 DVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVE-SLAVSNVEYIAC 334

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT+ G++Y WG G +  G LGHG  +S   PK + G L G +V  V+ G  HS
Sbjct: 335 GEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 394

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ--- 389
           A     G L+T+G+G  G LGHGD +S   P  V  LS   A  V+CG  H+  + +   
Sbjct: 395 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISG 454

Query: 390 ------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
                     +++ G G+  +LGH D      P  ++AL      +V  G S +VAL   
Sbjct: 455 QASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 514

Query: 444 GLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNEVYAWGS 498
           G VF  G      L +       P +V     +++V ++S G +HV AL+  +EVY WG 
Sbjct: 515 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 574

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
              G+ G  +  +   +P+ V  L+D  V+ I  GS F+    +   +  +S A   +C 
Sbjct: 575 GANGRLGHGSVEDK-KKPTLVDALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVCS 630

Query: 559 DVR-PHTFTLIR 569
             R P  FT  R
Sbjct: 631 GCRQPFGFTRKR 642


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 180/384 (46%), Gaps = 28/384 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIV 269
           +P   +L  ++ H++ G     L+   G +  +G+   G L + T +   +   +E+  V
Sbjct: 69  KPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTV 128

Query: 270 S-LSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           S +    C E H   VT+ GE+Y+WG G +  G LGHGN +    PK I G L G +V  
Sbjct: 129 SNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAY 188

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT 384
           VS G  H+A +T  G L+T+G+G  G LGHGDLKS   P  V  LS +   AV+CG  HT
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 385 -----LVLSQDGHTV-------WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
                +++++   +V       ++ G G+  +LGH D      P  +  L      +V  
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVAC 308

Query: 433 GTSFSVALTWDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLAL 487
           G S +VALT  G V   G  +     + H+    P LV   +   Q++ ++ G  HV  L
Sbjct: 309 GHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVL 368

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
           +  +EV+ WG    G+ G  +  +    P+ V  L+D  VR I  G+ F+ A        
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDR-KVPTLVEALKDRAVRYIACGANFTAAIC---QYK 424

Query: 548 ALSSAFTPLCVDVR-PHTFTLIRE 570
            +S A    C   R P  FT  R 
Sbjct: 425 WVSGADQSQCSSCRQPFGFTRKRR 448



 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 170/370 (45%), Gaps = 42/370 (11%)

Query: 174 LTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHI 224
           L  ++   D  V H+       +V+TWG +   ++    R  C RPRL +SL  SN+  +
Sbjct: 75  LVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFV 134

Query: 225 EAGQFCTFLLDSTGGLLVYGK-----GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
             G+F T  + +TG L  +G      G LG  N     +PKR+      + ++   C   
Sbjct: 135 ACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTW 194

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H   +TS G+++++G G  G LGHG+  S   P+ +   L G +   V+ G  H+AA+ E
Sbjct: 195 HTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVE-SLSGLKTIAVACGVWHTAAIVE 253

Query: 340 -------------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHT 384
                         G L+TWG+GD  RLGHGD ++R  PT V  L   D   V+CG S T
Sbjct: 254 VIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLT 313

Query: 385 LVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALT 441
           + L+  G  V SMG+   G+LG  H D G++  P ++E  +   +V ++  G+     LT
Sbjct: 314 VALTTSGQ-VLSMGNAVYGQLGNPHSD-GRI--PCLVEDKIVGEQVLQIACGSYHVAVLT 369

Query: 442 WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
               VF WG G         +     P LV  L    +  ++ G +   A+ QY  V   
Sbjct: 370 NRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAICQYKWVSGA 429

Query: 497 GSNTMGQCGQ 506
             +    C Q
Sbjct: 430 DQSQCSSCRQ 439


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 170/372 (45%), Gaps = 27/372 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           +++ I  G     L    G +  +G+   G LG    T    PK V    A+ ++    C
Sbjct: 262 DVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVE-SLAVSNVEYIAC 320

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT+ G++Y WG G +  G LGHG  +S   PK + G L G +V  V+ G  HS
Sbjct: 321 GEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHS 380

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ--- 389
           A     G L+T+G+G  G LGHGD +S   P  V  LS   A  V+CG  H+  + +   
Sbjct: 381 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISG 440

Query: 390 ------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
                     +++ G G+  +LGH D      P  ++AL      +V  G S +VAL   
Sbjct: 441 QASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 500

Query: 444 GLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNEVYAWGS 498
           G VF  G      L +       P +V     +++V ++S G +HV AL+  +EVY WG 
Sbjct: 501 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 560

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
              G+ G  +  +   +P+ V  L+D  V+ I  GS F+    +   +  +S A   +C 
Sbjct: 561 GANGRLGHGSVEDK-KKPTLVDALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVCS 616

Query: 559 DVR-PHTFTLIR 569
             R P  FT  R
Sbjct: 617 GCRQPFGFTRKR 628


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 151/299 (50%), Gaps = 21/299 (7%)

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           + V+G+   G LGL +   + +P +V     +    ++  +E H+  +T  G+V + G  
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNE-HIAVLTRNGDVLTVGFN 99

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA--GHSHSAAVTEDGLLYTWGEGDHGRL 354
             G+LGHGN  S   PK I   L   R+T +S+  G  + A +++DG LYT G  ++G+L
Sbjct: 100 GSGQLGHGNNKSISTPKKIES-LKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 355 GHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH-------TVWSMGSGNLGKL 405
           GHG   +  TPTLV  L D  V  VSC   H+L+++QD         TV+S+G  + G+L
Sbjct: 159 GHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQL 218

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISF 460
           G E T    TPK+I +L   +V +   G   SV +T  G VF  G         + + S 
Sbjct: 219 GQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDTKSR 278

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
           + PVL+  L +  IV  + G  H L      E+YA+G N  GQ G +     + QP ++
Sbjct: 279 NQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPKQI 337



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 166/394 (42%), Gaps = 42/394 (10%)

Query: 179 GDTDISV--AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFL- 233
           G+  I+V   +  V T G N   Q+        S P+      NIR  HI +   C  L 
Sbjct: 80  GNEHIAVLTRNGDVLTVGFNGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLA 139

Query: 234 -LDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE 289
            +   G L   G    G LG    +    P  V         +VS CS  H L VT +  
Sbjct: 140 IISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVS-CSYYHSLIVTQDMR 198

Query: 290 --------VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
                   VYS G  ++G+LG  +T  +  PK+I   L  ++V Q + G  HS  VT  G
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRS-LNTRQVIQTACGLHHSVFVTVHG 257

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +++ G  D+G+LGH D KSR+ P L+  L +  +   +CG  HTLV    G  +++ G 
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGE-IYAFGR 316

Query: 400 GNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTS------------FSVALTWDGLV 446
            + G+LG E  G+ +  PK I+        +   G               S +L   G +
Sbjct: 317 NDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAI 376

Query: 447 FWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              GL   S++++   P +        I  ++ G  H +AL +  +++ +G    GQ GQ
Sbjct: 377 M-QGLA-ESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQ 434

Query: 507 DNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSI 538
               N  DQ  P +V  L D  V  I  G   +I
Sbjct: 435 ---GNTEDQKLPKQVASLHDKKVIGIAGGFYHTI 465



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 22/262 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK-RVTQVSAGHSHSAAVTEDGLLYTWGE 348
           V+ +G   +G+LG G+   +  P  +    + +  VTQ++AG+ H A +T +G + T G 
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVR--FFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
              G+LGHG+ KS  TP  +  L ++     + + G  +  ++SQDG  +++ G  N G+
Sbjct: 99  NGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDG-KLYTCGYNNYGQ 157

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD--------GLVFWWGLGLRSS 456
           LGH     ++TP +++AL+  +V  V      S+ +T D          V+  G      
Sbjct: 158 LGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ 217

Query: 457 SISFH-----TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
               H     TP ++  L++ Q++  + G  H + ++ + EV++ G N  GQ G  N + 
Sbjct: 218 LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGH-NDTK 276

Query: 512 PVDQPSKVVGLEDVCVRQICAG 533
             +QP  +  L++  + Q   G
Sbjct: 277 SRNQPVLIESLKNKFIVQAACG 298



 Score = 73.9 bits (180), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 115/265 (43%), Gaps = 24/265 (9%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGK 300
           G LG  +T  +  PK       I SL+  +     C   H + VT  GEV+S G  ++G+
Sbjct: 216 GQLGQEHTCHEITPK------IIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQ 269

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDL 359
           LGH +T S+ +P LI   L  K + Q + G+ H+    + G +Y +G  D G+LG   + 
Sbjct: 270 LGHNDTKSRNQPVLIES-LKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNG 328

Query: 360 KSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGK----LGHEDTGKV 413
           ++   P  + E   V  +  S G  + L   Q+ +   S   G  G     L   +    
Sbjct: 329 QALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNN 388

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTG 468
             P+V    +K  + K+  G   S+AL   G +F +G G        +T     P  V  
Sbjct: 389 QQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVAS 448

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEV 493
           L   +++ ++ G  H + L +  +V
Sbjct: 449 LHDKKVIGIAGGFYHTIVLVKQKKV 473



 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 17/215 (7%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
           H +V++ G N + Q+        ++P L +SL +  I     G + T +   TG +  +G
Sbjct: 256 HGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFG 315

Query: 245 ---KGWLGLANTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
              KG LG+  T  Q L  PK++     + ++  S  ++  + +     +  S  +GE G
Sbjct: 316 RNDKGQLGIE-TNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESG 374

Query: 300 KLGHG----NTLSQRRPKLIMGGLYGK-RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            +  G    N L+ ++P++    L  K  +++++ G  HS A+ E G L+T+G G+HG+L
Sbjct: 375 AIMQGLAESNNLNNQQPQVQY--LSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQL 432

Query: 355 GHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G G+ + +  P  V  L D  V  ++ G  HT+VL
Sbjct: 433 GQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVL 467


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 172/364 (47%), Gaps = 38/364 (10%)

Query: 192 TWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           TWG   + ++  +   K S+P  + LP    S+I  I  G + +  L   G + ++G+G 
Sbjct: 546 TWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGS 605

Query: 248 LG------LANTTI--QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +       L N T   Q LP++V     IV +S+      H   V S GE+ +WG GE G
Sbjct: 606 VKNPPIATLGNGTFDDQLLPQKVESLQEIVVISIGFY---HSAAVKSNGELLTWGCGEDG 662

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHG+  +Q  PK++   +    VTQV  G  H+  +T++G ++TWG  ++G+LG GD 
Sbjct: 663 QLGHGDVFNQPIPKVVQS-ITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDT 721

Query: 360 KSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-----WSMGSGNLGKLGHEDTGK 412
           +   TP LVT L    +  ++CG +H  VL+ +   +      +MGS N+          
Sbjct: 722 QKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSANI---------- 771

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR---SSSISFHTPVLVTGL 469
           ++ P ++ +L+   + ++  G   + ALT  G V+ WG G         S   P LV  L
Sbjct: 772 ISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQELGHGHGTSEAHPKLVETL 831

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            +  I  +S G  H+  L+   ++Y  G +  GQ G    +   ++P K+  L       
Sbjct: 832 RNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHA--AGDQNRPKKIDSLLKTTFMS 889

Query: 530 ICAG 533
           I  G
Sbjct: 890 ISCG 893



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 27/215 (12%)

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT----ELSDVGAVSCGESHTLVLSQDGHT 393
           T  GL+ TWG G + +LG   ++    PT        +SD+ ++SCG  ++  L+++G  
Sbjct: 540 TSRGLM-TWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDV 598

Query: 394 -VWSMGSGN---LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            +W  GS     +  LG+        P+ +E+L++  V  +  G   S A+  +G +  W
Sbjct: 599 YMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVV--ISIGFYHSAAVKSNGELLTW 656

Query: 450 GLG----LRSSSISFHTPV--LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           G G    L    + F+ P+  +V  ++SH +  V  G+ H + L++  +V+ WG++  GQ
Sbjct: 657 GCGEDGQLGHGDV-FNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 715

Query: 504 CG----QDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            G    Q N +     P  V  L+   + QI  G+
Sbjct: 716 LGLGDTQKNCT-----PMLVTSLDKYHIIQIACGA 745


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 191/419 (45%), Gaps = 50/419 (11%)

Query: 190 VYTWG---CNLHHQ------ILDEVRGKCSRPRLQSLPSNI----RHIEAGQFCTFLLDS 236
           VY WG   C+   +      +   VR    RP+   L SN+     H++ G   + L+  
Sbjct: 37  VYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPK--PLESNLVLDAYHVDCGVKHSALVTK 94

Query: 237 TGGLLVYGK---GWLGLANT--TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
            G +  +G+   G LG  +   +I P   R+    A+ ++ +  C E H   VT+ GE+Y
Sbjct: 95  NGEVFTWGEESGGRLGHGSREDSIHP---RLIESLAVCNVDIVACGEFHTCAVTTAGELY 151

Query: 292 SWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           +WG G H  G LGHG  +S   PK I G L G  V  VS G  H+A +T  G L+T+G+G
Sbjct: 152 TWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDG 211

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT-----LVLSQDGHT-----VWSM 397
             G LGHG+ +S   P  V  LS +   +V+CG  HT     ++++Q   +     +++ 
Sbjct: 212 TFGVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTW 271

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G G+  +LGH D      P  + +L  +   ++  G S +V LT  G V   G      L
Sbjct: 272 GDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGNTVYGQL 331

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G   S      P LV  +    +V V+ G  HV  L+  +EV+ WG    G+ G  +  +
Sbjct: 332 GNPRSDGKI--PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIED 389

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVR-PHTFTLIR 569
               P+ V  L D  VR I  G+ F+ A      +  +S A    C   R P  FT  R
Sbjct: 390 R-KIPTLVEALRDRSVRHIACGANFTAAIC---QHKWVSGAEQSQCASCRQPFGFTRKR 444



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 138/336 (41%), Gaps = 78/336 (23%)

Query: 182 DISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTF 232
           D  V HS       +V+TWG     ++    R     PRL +SL   N+  +  G+F T 
Sbjct: 83  DCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTC 142

Query: 233 LLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
            + + G L  +G G      LG        +PKR+      ++++   C   H   +T+ 
Sbjct: 143 AVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTM 202

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-------- 339
           G+++++G G  G LGHGN  S   PK +   L G +   V+ G  H+AA+ E        
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESISCPKEVES-LSGLKTISVACGVWHTAAIVEVIVTQSSS 261

Query: 340 ---DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT- 393
               G L+TWG+GD  RLGHGD + R  PT V  L   D   ++CG S T+ L+  G   
Sbjct: 262 SISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVL 321

Query: 394 -------------------------------------------------VWSMGSGNLGK 404
                                                            V++ G G  G+
Sbjct: 322 SMGNTVYGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGR 381

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           LGH D      P ++EALR   VR +  G +F+ A+
Sbjct: 382 LGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAI 417


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 168/350 (48%), Gaps = 28/350 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG-----GL 240
           A    + WG N   Q+ D    + S P      +++  + AG   + +L + G     G 
Sbjct: 654 ADGVAWAWGGNDQGQLGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGN 713

Query: 241 LVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
             YG+  LG   +T+ P+P +VP  +A+  ++      +H L V S+G V++WG    G+
Sbjct: 714 NAYGQ--LGDGTSTLHPVPVQVPGPSAMKGVA---AGGSHSLAVRSDGTVWAWGNNGSGE 768

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G  L + RP  + G   G  V  VSAG +HS AV  DG ++ WG    G+LG G   
Sbjct: 769 LGDGTGLQRPRPVQVQG--LGSAVA-VSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGI 825

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           +R+ P  V+ L+ V AVS G +H+L L  DG TVW+ G    G+LG   + +   P  + 
Sbjct: 826 TRYVPVRVSGLNGVMAVSAGSAHSLALRSDG-TVWAWGYNFYGQLGDATSTQRLVPIQVP 884

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIV 475
            L    V  + AGT  S+A+  DG V+ WG          + I    PV V GL+   +V
Sbjct: 885 GLTG--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPPVQVPGLAG--MV 940

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-----PVDQPSKVV 520
            V+ G  H LA+     V+AWG N  GQ G    +      P+   S V+
Sbjct: 941 SVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGVI 990



 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 175/363 (48%), Gaps = 26/363 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH-IEAGQFCTFLLDSTGGLLVYG 244
           A    + WG +   Q+ D    +  RP  + L   IR  +  G   +  L + G +  +G
Sbjct: 354 ADGITWAWGDDSQGQLGDGQSSQQLRP-ARVLGQRIRMPLGTGNRHSLALHADGTVWAWG 412

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG      + LP +VP  A + +LS    + +H L   ++G V++WG    G+L
Sbjct: 413 VNTAGQLGDGTDLPRTLPVQVPGLAGVHTLS---ATTSHSLAARADGTVWAWGDNAFGQL 469

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T +QR   + + GL G  V  VS+ H HS AV+ DG ++ WG    GRLG G   S
Sbjct: 470 GDGTT-TQRLLPVQVPGLAG--VDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLS 526

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R TP  V  LS + AV+ G +H+L L  DG TVW+ G  + G LG   T +  +P  +  
Sbjct: 527 RLTPVQVPGLSSMVAVAAGSTHSLALRADG-TVWAWGDNSNGALGDGTTLRRLSPVQVPG 585

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  + AG  +S+A+   G V+ WG      LG  +++    TP     LS   +V
Sbjct: 586 LSG--VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRV-TPTQAPALSG--VV 640

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            ++ GDSH LAL      +AWG N  GQ G D  +     P+ V GL  V    + AG+ 
Sbjct: 641 ALAAGDSHSLALRADGVAWAWGGNDQGQLG-DATTLERSTPAAVPGLAHVVA--LAAGNA 697

Query: 536 FSI 538
            S+
Sbjct: 698 HSL 700



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 178/361 (49%), Gaps = 24/361 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            KV  WG N + Q+ D    +   P L S  + ++ + AG F +  L S G +  +G+  
Sbjct: 206 GKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGENG 265

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG+++TT +P+P  VP    + ++       AH L + S+G V +WG  +HG++G+G
Sbjct: 266 SGQLGISSTTRRPVPVVVP---GLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNG 322

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T+SQ+   + + G+   R+  ++AG +HS A+  DG+ + WG+   G+LG G    +  
Sbjct: 323 -TISQQLTPVQVPGV--GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLR 379

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V        +  G  H+L L  DG TVW+ G    G+LG       T P  +  L  
Sbjct: 380 PARVLGQRIRMPLGTGNRHSLALHADG-TVWAWGVNTAGQLGDGTDLPRTLPVQVPGLAG 438

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V  + A TS S+A   DG V+ WG      LG  +++     PV V GL+   +  VS
Sbjct: 439 --VHTLSATTSHSLAARADGTVWAWGDNAFGQLGDGTTTQRL-LPVQVPGLAG--VDTVS 493

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
               H LA+S+   V+AWG N  G+ G D  +     P +V GL  +    + AGS  S+
Sbjct: 494 SMHQHSLAVSRDGTVWAWGFNGSGRLG-DGTTLSRLTPVQVPGLSSMVA--VAAGSTHSL 550

Query: 539 A 539
           A
Sbjct: 551 A 551



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 174/341 (51%), Gaps = 22/341 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N + Q+ D        P R+QSL S +  +  G   +  L S G +  +G    
Sbjct: 58  VWAWGDNTYGQLGDGTGITQRLPVRVQSLDS-VVALAVGYQHSLALRSDGTVWAWGDNFF 116

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +     +P +V     +V+++     + H L + S+G V++WG   HG+LG   
Sbjct: 117 GQLGDGSDAQSQVPIQVWSLNGVVAIA---AGDHHSLALLSDGSVWAWGYNAHGQLGDDT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T++   P  + G L G  V  +SAG +HS AV  DG +  WG+  +G+LG G    R TP
Sbjct: 174 TVASPLPVQVQG-LSG--VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTP 230

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
            LV+ L+ V +V  G  H+L L  DG TV + G    G+LG   T +   P V+  L   
Sbjct: 231 VLVSSLTGVKSVVAGTFHSLALCSDG-TVRAWGENGSGQLGISSTTRRPVPVVVPGLTN- 288

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIG 480
            V+ + AG++ S+AL  DG V  WG      + + +IS   TPV V G+   ++  ++ G
Sbjct: 289 -VQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPGVG--RMKSIAAG 345

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            +H LA+      +AWG ++ GQ G D  S+   +P++V+G
Sbjct: 346 GAHSLAMRADGITWAWGDDSQGQLG-DGQSSQQLRPARVLG 385



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 134/268 (50%), Gaps = 17/268 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
            V+ WG N   Q+ D        P   S  + +  + AG   +  L S G +  +G    G
Sbjct: 808  VWAWGGNSQGQLGDGTGITRYVPVRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYG 867

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG A +T + +P +VP    +VS++       H L V S+G V++WG   +G+LG G  
Sbjct: 868  QLGDATSTQRLVPIQVPGLTGVVSIA---AGTHHSLAVRSDGTVWAWGYNFYGQLGDGTK 924

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            + QR P + + GL G  +  V+AG  HS AV  +G ++ WG  +HG+LG G    R  P 
Sbjct: 925  I-QRSPPVQVPGLAG--MVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPV 981

Query: 367  LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG--KVTTPKVIEALRK 424
             ++  S V A +    H+LV+  DG TVW  GS N  +LG   T   K+ TP  +     
Sbjct: 982  PISSSSGVIAAAA-NWHSLVVRTDG-TVWGWGSNNASQLGDGSTSDRKMPTPSSV----P 1035

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWGLG 452
              VR + +G + S+AL  DG V+ WG G
Sbjct: 1036 NGVRSISSGANHSLALRSDGTVWAWGFG 1063



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 139/273 (50%), Gaps = 22/273 (8%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
               AH L + S+G V++WG   +G+LG G  ++QR P  +        V  ++ G+ HS
Sbjct: 43  AAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQ---SLDSVVALAVGYQHS 99

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+  DG ++ WG+   G+LG G       P  V  L+ V A++ G+ H+L L  DG +V
Sbjct: 100 LALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHHSLALLSDG-SV 158

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           W+ G    G+LG + T  V +P  ++      V  + AG++ S+A+  DG V  WG    
Sbjct: 159 WAWGYNAHGQLGDDTT--VASPLPVQVQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYY 216

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG  SS+  + TPVLV+ L+   +  V  G  H LAL     V AWG N  GQ G   
Sbjct: 217 GQLGDGSSTERW-TPVLVSSLTG--VKSVVAGTFHSLALCSDGTVRAWGENGSGQLG--- 270

Query: 509 FSNPVDQPSKVV--GLEDVCVRQICAGSLFSIA 539
            S+   +P  VV  GL +  V+ + AGS  S+A
Sbjct: 271 ISSTTRRPVPVVVPGLTN--VQALAAGSAHSLA 301



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 156/332 (46%), Gaps = 26/332 (7%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
            V+ WG N   ++ D    +  RP ++Q L S +  + AG   +  + S G +  +G   +
Sbjct: 758  VWAWGNNGSGELGDGTGLQRPRPVQVQGLGSAVA-VSAGTNHSLAVQSDGTVWAWGGNSQ 816

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            G LG      + +P RV     ++++S      AH L + S+G V++WG   +G+LG   
Sbjct: 817  GQLGDGTGITRYVPVRVSGLNGVMAVS---AGSAHSLALRSDGTVWAWGYNFYGQLGD-A 872

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            T +QR   + + GL G  V  ++AG  HS AV  DG ++ WG   +G+LG G    R  P
Sbjct: 873  TSTQRLVPIQVPGLTG--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSPP 930

Query: 366  TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
              V  L+ + +V+ G  H+L +  +G TVW+ G  N G+LG   T +   P  I +    
Sbjct: 931  VQVPGLAGMVSVAAGTYHSLAVHSNG-TVWAWGYNNHGQLGDGTTTQRLLPVPISSSSGV 989

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS-ISFHTPVLVTGLSSHQIVDVS 478
                  A    S+ +  DG V+ WG      LG  S+S     TP  V     + +  +S
Sbjct: 990  ---IAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPSSVP----NGVRSIS 1042

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             G +H LAL     V+AWG    GQ G    S
Sbjct: 1043 SGANHSLALRSDGTVWAWGFGNSGQLGDGVMS 1074



 Score = 90.5 bits (223), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 13/219 (5%)

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
           QV+AG +HS  +  DG ++ WG+  +G+LG G   ++  P  V  L  V A++ G  H+L
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDSVVALAVGYQHSL 100

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
            L  DG TVW+ G    G+LG     +   P  + +L    V  + AG   S+AL  DG 
Sbjct: 101 ALRSDG-TVWAWGDNFFGQLGDGSDAQSQVPIQVWSLNG--VVAIAAGDHHSLALLSDGS 157

Query: 446 VFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           V+ WG          ++++   PV V GLS   +V +S G +H LA+    +V AWG N 
Sbjct: 158 VWAWGYNAHGQLGDDTTVASPLPVQVQGLSG--VVALSAGSTHSLAVLSDGKVKAWGDNY 215

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            GQ G D  S     P  V  L    V+ + AG+  S+A
Sbjct: 216 YGQLG-DGSSTERWTPVLVSSL--TGVKSVVAGTFHSLA 251



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 10/185 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
            V+ WG N + Q+ D  + + S P      + +  + AG + +  + S G +  +G    G
Sbjct: 908  VWAWGYNFYGQLGDGTKIQRSPPVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHG 967

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG   TT + LP  VP+ ++  S  ++  +  H L V ++G V+ WG     +LG G+T
Sbjct: 968  QLGDGTTTQRLLP--VPISSS--SGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDGST 1023

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
              ++ P           V  +S+G +HS A+  DG ++ WG G+ G+LG G +  R  P 
Sbjct: 1024 SDRKMPTPSS---VPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPA 1080

Query: 367  LVTEL 371
             V+  
Sbjct: 1081 GVSGF 1085


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 190/415 (45%), Gaps = 82/415 (19%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVY 243
             V+ WG N   Q+ D      + PRL  +     +N+  + A    T  L + G +  +
Sbjct: 215 GTVWAWGSNFSGQLGD----GTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAW 270

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G LG   TT +  P +VP    +V+LS      +H L + ++G V++WG   +G+
Sbjct: 271 GYNSYGQLGDGTTTPRLSPVQVPGLTNVVALS---AGYSHSLALRTDGTVWAWGYNYNGQ 327

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG+G   +QR P + + GL    V  +SAG+SHS A+  DG ++ WG    G+LG G   
Sbjct: 328 LGNG-IPTQRSPSIPVFGLI--DVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTI 384

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDG----------------------------- 391
            R +P  V +L+DV A+S G+SH+L L  DG                             
Sbjct: 385 PRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPD 444

Query: 392 --------------------HTVWSMGSGNLGKLGHEDTGKVTTPKV--IEALRKFRVRK 429
                                TVW+ GS + G+LG       TTP++  ++ L    V  
Sbjct: 445 LTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGD----GTTTPRLSPVQMLGLTNVVA 500

Query: 430 VCAGTSFSVALTWDGLVFWWGL---GLRSSSISFH--TPVLVTGLSSHQIVDVSIGDSHV 484
           + AG   S+A+  DG V+ WG    G      + H  TPV V GL+   +V +S GDSH 
Sbjct: 501 LSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLT--DVVALSAGDSHS 558

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           LAL     V+AWGSN+  Q G D  + P   P +V GL DV    + AG   S+A
Sbjct: 559 LALRTDGTVWAWGSNSSSQLG-DGTTTPRGSPVQVPGLTDVVA--LSAGGAHSLA 610



 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 164/343 (47%), Gaps = 28/343 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYG- 244
             V+ WG N   Q+ D       RP    +P  +++  + AG   +  L + G +  +G 
Sbjct: 365 GTVWAWGYNSLGQLGDGT--TIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGV 422

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   TT +  P +VP    +V+LS       H L + + G V++WG    G+LG
Sbjct: 423 NYSGQLGDGTTTHRLSPVQVPDLTDVVALSAGGN---HTLALRTNGTVWAWGSNSDGQLG 479

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T  +  P  ++G      V  +SAG+ HS AV  DG ++ WG    G+LG G    R
Sbjct: 480 DGTTTPRLSPVQMLGL---TNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHR 536

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            TP  V  L+DV A+S G+SH+L L  DG TVW+ GS +  +LG   T    +P  +  L
Sbjct: 537 LTPVQVPGLTDVVALSAGDSHSLALRTDG-TVWAWGSNSSSQLGDGTTTPRGSPVQVPGL 595

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               V  + AG + S+AL  DG V+ WG      LG  +++     PVLV+ L+     +
Sbjct: 596 TD--VVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLF-PVLVSNLTGTS--N 650

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN---FSNPVDQP 516
           +  G  H LAL       AWG+N  GQ G      F +PV  P
Sbjct: 651 LYAGAGHSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHPVQVP 693



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 16/259 (6%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
               +H L + ++G V++WG    G+LG G T  +  P  + G      V  +SAG+ H 
Sbjct: 2   AAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGL---TDVVALSAGNHHC 58

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+  DG ++ WG    G+LG G    R +   V  L+DV A+S G S+TL L  DG TV
Sbjct: 59  LALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTDVVALSAGSSYTLALRTDG-TV 117

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           W+ G    G+LG   T     P  +  L    V  + +G   S+AL  DG V+ WG    
Sbjct: 118 WAWGYNFYGQLGDGTTTPRLAPVQVPGLTD--VVALSSGIYHSLALRTDGTVWAWGDNAS 175

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG  +++    +PV V GL+   +V +S G  H LA+     V+AWGSN  GQ G D 
Sbjct: 176 GQLGDGTATRRL-SPVQVPGLT--DVVALSAGGYHSLAVRTDGTVWAWGSNFSGQLG-DG 231

Query: 509 FSNPVDQPSKVVGLEDVCV 527
            + P   P +V GL +V  
Sbjct: 232 TATPRLSPVQVSGLTNVVA 250



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 122/236 (51%), Gaps = 19/236 (8%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           ++AG+SHS A+  DG ++ WG    G+LG G    R +P  V  L+DV A+S G  H L 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLTDVVALSAGNHHCLA 60

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV--IEALRKFRVRKVCAGTSFSVALTWDG 444
           L  DG TVW+ GS + G+LG       TTP++  ++      V  + AG+S+++AL  DG
Sbjct: 61  LRTDG-TVWAWGSNSSGQLGD----GTTTPRLSSVQVPGLTDVVALSAGSSYTLALRTDG 115

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            V+ WG      LG  +++     PV V GL+   +V +S G  H LAL     V+AWG 
Sbjct: 116 TVWAWGYNFYGQLGDGTTTPRL-APVQVPGLT--DVVALSSGIYHSLALRTDGTVWAWGD 172

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
           N  GQ G    +  +  P +V GL DV    + AG   S+A     +  A  S F+
Sbjct: 173 NASGQLGDGTATRRL-SPVQVPGLTDVVA--LSAGGYHSLAVRTDGTVWAWGSNFS 225


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 161/351 (45%), Gaps = 24/351 (6%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 146 KPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 205

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG       PK I G L G  V 
Sbjct: 206 -CNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVA 264

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG+L S   P  V  LS +   AV+CG  H
Sbjct: 265 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWH 324

Query: 384 TLVL----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T  +          S     +++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 325 TAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 384

Query: 434 TSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            S +V LT  G V   G      L + +     P LV   ++   ++ V+ G  HV  L+
Sbjct: 385 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLT 444

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +EV+ WG    G+ G  +  +    P++V  L+D  VR I  G+ F+ A
Sbjct: 445 GRSEVFTWGKGANGRLGHGDIEDR-KVPTQVEALKDRAVRHIACGANFTAA 494



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 143/346 (41%), Gaps = 79/346 (22%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRH 223
           +L  ++   D  V H+        V+TWG +   ++    R     PRL +SL + N+  
Sbjct: 151 RLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDF 210

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + +TG L  +G G      LG        +PKR+      + ++   C  
Sbjct: 211 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 270

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   +TS G+++++G G  G LGHGN  S   PK +   L G +   V+ G  H+AA+ 
Sbjct: 271 WHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIV 329

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD +SR  PT V  L D     V+CG S T+
Sbjct: 330 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTV 389

Query: 386 VLSQDGHT---------------------------------------------------V 394
            L+  G                                                     V
Sbjct: 390 CLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 449

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           ++ G G  G+LGH D      P  +EAL+   VR +  G +F+ A+
Sbjct: 450 FTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 495


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 153/300 (51%), Gaps = 25/300 (8%)

Query: 209  CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVP 263
            C  P L++    I+ +  G     L+  +G L  +GK   G LG  L    IQ  PKR+ 
Sbjct: 1209 CPMPPLKNEKRAIK-VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLE 1267

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGK 322
                   + + +C   H + V S+  VYSWG  + G+LGHG  ++SQ RPK+I   + G+
Sbjct: 1268 FFRGKSPIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIED-ISGQ 1326

Query: 323  RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG------- 375
            ++  ++AG +H+  + + G LY++G GD G+LGHG   S+  PT +   + VG       
Sbjct: 1327 KIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGK 1386

Query: 376  --AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
               ++CG  H+++ S +G  V+S G G  G+LGH +   +  P++IEAL+   V K+  G
Sbjct: 1387 ITQIACGFGHSVICSDNGE-VYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKISCG 1443

Query: 434  TSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
              +++A T    V+ WGLG        S  +  TP +V       +  +  G +H + L+
Sbjct: 1444 HFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503



 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 185/401 (46%), Gaps = 60/401 (14%)

Query: 189  KVYTWGCNLHHQI---LDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVY 243
            +++TWG N   Q+   LD  + + +  RL+     S I  +E G   +  +DS   +  +
Sbjct: 1238 ELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSW 1297

Query: 244  GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G+   G LG    ++     ++  + +   +       AH + +   GE+YS+G G+ G+
Sbjct: 1298 GQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQ 1357

Query: 301  LGHGNTLSQRRPKLI----MGGLY--GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            LGHG+ +S+  P  I    + G+   G ++TQ++ G  HS   +++G +Y+WG G  G+L
Sbjct: 1358 LGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQL 1417

Query: 355  GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
            GHG+ +S   P L+  L  V  +SCG  +T+  + D   V+S G G   KLGH       
Sbjct: 1418 GHGNYESIARPRLIEALKGVTKISCGHFYTMATT-DLKNVYSWGLGEHMKLGHGSDKNEA 1476

Query: 415  TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQI 474
            TP+V++   +  V K+  G + ++ LT+ G        L ++S+S    V       +  
Sbjct: 1477 TPRVVDFFIQKNVSKIVCGLNHTITLTYPG-------DLNNNSLSNDDDV-------NDF 1522

Query: 475  VDVS-----------------IGDSHVLAL---SQYNEVYAWGSNTMGQCGQDN------ 508
            +D++                  G S  L L   SQ + +YA G+   G+ G         
Sbjct: 1523 IDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPF 1582

Query: 509  FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            F  P+  P+ + G+  + +  I  G+ F+   T   SN AL
Sbjct: 1583 FDKPI--PTAIKGVNALNLIDISCGTDFTAMIT---SNGAL 1618



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 67/360 (18%)

Query: 190  VYTWGCNLHHQILDEVRG-KCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG-- 244
            VY+WG +   Q+    +    +RP++    S   I+ I AG   T +L  +G L  +G  
Sbjct: 1294 VYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYG 1353

Query: 245  -KGWLGLANTTIQPLPKRVPLEAAIV------SLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G LG  +   + +P R+ L   +        ++   C   H +  +  GEVYSWG+G+
Sbjct: 1354 DQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGK 1413

Query: 298  HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
             G+LGHGN  S  RP+LI      K VT++S GH ++ A T+   +Y+WG G+H +LGHG
Sbjct: 1414 QGQLGHGNYESIARPRLIEAL---KGVTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHG 1470

Query: 358  DLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGH----------------------- 392
              K+  TP +V      +V  + CG +HT+ L+  G                        
Sbjct: 1471 SDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTS 1530

Query: 393  -------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
                         +G  G+LG  +  +V+            +    AG    + L  D  
Sbjct: 1531 NSSSSSSLTNDNNNGRSGRLGLNENSQVSP-----------IYACGAGEHGKLGLGGD-- 1577

Query: 446  VFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                   L+S       P  + G+++  ++D+S G      ++    +Y WG    GQ G
Sbjct: 1578 -------LKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIG 1630



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 377  VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKV-TTPKVIEALR-KFRVRKVCAG 433
            VSCG  H  ++S+ G  +++ G    G+LGH  D GK+ TTPK +E  R K  +  V  G
Sbjct: 1223 VSCGWDHVALISESGE-LFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECG 1281

Query: 434  TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
               S+ +  D +V+ WG      LG  + S+S + P ++  +S  +I  ++ G +H + L
Sbjct: 1282 GEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVL 1341

Query: 488  SQYNEVYAWGSNTMGQCGQDNF 509
             +  E+Y++G    GQ G  +F
Sbjct: 1342 KKSGELYSFGYGDQGQLGHGSF 1363



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 88/253 (34%), Gaps = 65/253 (25%)

Query: 178  IGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDST 237
             G + I   + +VY+WG     Q+        +RPRL      +  I  G F T      
Sbjct: 1394 FGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKISCGHFYTMATTDL 1453

Query: 238  GGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGE--- 289
              +  +G G    LG  +   +  P+ V      +  +VSK  C   H +T+T  G+   
Sbjct: 1454 KNVYSWGLGEHMKLGHGSDKNEATPRVVDF---FIQKNVSKIVCGLNHTITLTYPGDLNN 1510

Query: 290  --------------------------------------------------VYSWGVGEHG 299
                                                              +Y+ G GEHG
Sbjct: 1511 NSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHG 1570

Query: 300  KLGHGNTLSQ---RRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            KLG G  L      +P    + G+    +  +S G   +A +T +G LY WG G+ G++G
Sbjct: 1571 KLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIG 1630

Query: 356  HGDLKSRHTPTLV 368
            +G       P  +
Sbjct: 1631 NGKTDDAWVPIRI 1643


>gi|340379685|ref|XP_003388357.1| PREDICTED: hypothetical protein LOC100636752 [Amphimedon
            queenslandica]
          Length = 1500

 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 180/389 (46%), Gaps = 41/389 (10%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            SKVY+WG    +Q+    R K + P L +   N+    AG +C++L+   G +   G G 
Sbjct: 1013 SKVYSWGKGKWNQLGQGTRDK-TIPDLINEWDNVSQAVAGSYCSYLVHCDGSVSSVGDGA 1071

Query: 248  LGL-------ANTTIQPL-----PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
             G          T+I+ +      K V L A     + ++  E   L +T EGEVYSWG 
Sbjct: 1072 SGRLGHNSSDNETSIRQIGAFTGTKIVQLVAG--PRTATETDEGFALALTEEGEVYSWGR 1129

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            G   +LGH NT + + PKLI  GL GK +  +S G SH AAV+  G LYT+G    GRLG
Sbjct: 1130 GSKHRLGHSNTDNVKSPKLIE-GLVGKNIKMISCGDSHCAAVSVTGTLYTFGNSAGGRLG 1188

Query: 356  HGDLKSRHTPTLVTELSD----------VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             G+  +     + T L D          +G VSCG S+T+ ++QDG  V+  G G     
Sbjct: 1189 RGEDAAPAPTEVTTFLGDNQRDEIHGVKIGHVSCGNSYTIAITQDGRQVFGFGKGANSCF 1248

Query: 406  GHEDTGKVTTPKV----IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH 461
            G     +     +    ++A+  F   KV  G   ++  T   L  +  L      I   
Sbjct: 1249 GLSSLDQQIYKPICLGHLQAMGPF--SKVFCGRCTALITTSGKLCMFGKLTETDPVIDTA 1306

Query: 462  TPV-LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
              + L       ++VDV+  D ++L ++    VY+WG NT G   Q  +   ++ PS+VV
Sbjct: 1307 RYIELPNEPHDSKVVDVAFADQYILCVTSTGNVYSWGKNT-GYTIQLGYE--IESPSQVV 1363

Query: 521  G-----LEDVCVRQICAGSLFSIAYTVPP 544
                  +    ++Q+ AG   ++  T+PP
Sbjct: 1364 PKLINVISGKGIKQVSAGVRHALCCTMPP 1392



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 110/236 (46%), Gaps = 31/236 (13%)

Query: 287  EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
            + +VYSWG G+  +LG G T  +  P LI        V+Q  AG   S  V  DG + + 
Sbjct: 1012 DSKVYSWGKGKWNQLGQG-TRDKTIPDLIN---EWDNVSQAVAGSYCSYLVHCDGSVSSV 1067

Query: 347  GEGDHGRLGHGDLKSR--------HTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWS 396
            G+G  GRLGH    +          T T + +L      A    E   L L+++G  V+S
Sbjct: 1068 GDGASGRLGHNSSDNETSIRQIGAFTGTKIVQLVAGPRTATETDEGFALALTEEGE-VYS 1126

Query: 397  MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
             G G+  +LGH +T  V +PK+IE L    ++ +  G S   A++  G ++ +G      
Sbjct: 1127 WGRGSKHRLGHSNTDNVKSPKLIEGLVGKNIKMISCGDSHCAAVSVTGTLYTFGNSAGGR 1186

Query: 451  LGLRSSSISFHTPVLVTGLSSHQ--------IVDVSIGDSHVLALSQYN-EVYAWG 497
            LG    +    T V  T L  +Q        I  VS G+S+ +A++Q   +V+ +G
Sbjct: 1187 LGRGEDAAPAPTEV-TTFLGDNQRDEIHGVKIGHVSCGNSYTIAITQDGRQVFGFG 1241


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 204/428 (47%), Gaps = 33/428 (7%)

Query: 125 ATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDIS 184
           A +Y    +RS   V+       D+  + LGD  +++S   + S  +  +T   G     
Sbjct: 292 AGNYHSLAVRSDGAVW----AWGDNRYRQLGDGTTTSSRVPVQSGLSGGVTLVAGYKHSL 347

Query: 185 VAHSK--VYTWGCNLHHQILDEVRG-KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
           V  S   V++WG N+  Q+ D     + S  ++  L      + +GQ  + +LDS G + 
Sbjct: 348 VLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVW 407

Query: 242 VYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEA---HVLTVTSEGEVYSWGVGE 297
            +G  + G L N T         L AA V L  S    A   H L + ++  V++WGV E
Sbjct: 408 AWGDNYSGQLGNGT-----GLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNE 462

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           HG+LG G TL+ R   + + GL G  V+ VSAG  HS A+  +G ++ WG   +G+LG G
Sbjct: 463 HGQLGDG-TLTDRTRPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDG 519

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
               R  P  V  LS V AV+ G+SH+L L  DG TVW+ G    G++G         P 
Sbjct: 520 TNTDRLQPVQVAGLSGVVAVAAGDSHSLALRSDG-TVWAWGYNFDGQIGDGSYSWRFLP- 577

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
            ++ +    V  V AG   S+AL  DG V+ WG      LG  S++I+   PV V GLS 
Sbjct: 578 -VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLSG 636

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +V +  G+ H L L     V+AWG N  GQ G  +  N    P +V GL  V    + 
Sbjct: 637 --VVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNR-STPVRVSGLSGVV--SVV 691

Query: 532 AGSLFSIA 539
           AG   S+A
Sbjct: 692 AGDYHSLA 699



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 162/355 (45%), Gaps = 30/355 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N   Q+ D        P R+ +L S +  + +G + +  L S G +  +G    
Sbjct: 57  VWAWGFNRQGQLGDGTLVDSPTPVRVTNL-SGVVSVASGDYHSLGLSSDGTVWAWGDNTA 115

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG    +  P+P RV   + +VSL       +H L + S+G V++WG   + +LG+  
Sbjct: 116 GQLGNGTASASPVPVRVQNLSGVVSLG---SGFSHGLALRSDGTVWAWGDNRYNQLGNVG 172

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
                 P  + G L G  V  V AG  +S A+  DG ++ WG+  +G+LG G    R  P
Sbjct: 173 ATRSNLPVQVPG-LSG--VIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVP 229

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V  +S G  HT+ L  DG +VW+ G    G+LG   T     P V   L   
Sbjct: 230 VQVLNLSGVMNLSAGSFHTVALRSDG-SVWAWGFNAYGQLGDGTTTSRFQP-VQVGLSD- 286

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V  + AG   S+A+  DG V+ WG      LG   ++ S   PV  +GLS    V +  
Sbjct: 287 -VLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLG-DGTTTSSRVPVQ-SGLSGG--VTLVA 341

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV----VGLEDVCVRQI 530
           G  H L L     V++WG N  GQ G   F NP     KV    +G  DV   Q+
Sbjct: 342 GYKHSLVLRSDGTVWSWGDNVFGQLGDGTF-NPRSSAVKVSWLSLGRADVSSGQL 395



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 132/269 (49%), Gaps = 19/269 (7%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
            + H + V S+G V++WG    G+LG G  +    P  +   L G  V  V++G  HS  
Sbjct: 44  GQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVT-NLSG--VVSVASGDYHSLG 100

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           ++ DG ++ WG+   G+LG+G   +   P  V  LS V ++  G SH L L  DG TVW+
Sbjct: 101 LSSDGTVWAWGDNTAGQLGNGTASASPVPVRVQNLSGVVSLGSGFSHGLALRSDG-TVWA 159

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            G     +LG+    +   P  +  L    V  V AG  +S+AL  DG V+ WG      
Sbjct: 160 WGDNRYNQLGNVGATRSNLPVQVPGLSG--VIAVVAGGYYSLALRSDGTVWAWGDNRYGQ 217

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           LG   ++     PV V  LS   ++++S G  H +AL     V+AWG N  GQ G D  +
Sbjct: 218 LG-DGTTTQRAVPVQVLNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLG-DGTT 273

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               QP + VGL DV    + AG+  S+A
Sbjct: 274 TSRFQPVQ-VGLSDVLT--LVAGNYHSLA 299



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 9/224 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++  V+ WG N + Q+ D       +P   +  S +  + AG   +  L S G +  +G 
Sbjct: 501 SNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLSGVVAVAAGDSHSLALRSDGTVWAWGY 560

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G +G  + + + LP +      +  +        H L + S+G V++WG    G+LG
Sbjct: 561 NFDGQIGDGSYSWRFLPVQ---VVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLG 617

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G+T   +   + + GL G  V  + +G+ HS  +  DG ++ WG    G+LG G L +R
Sbjct: 618 DGSTAINKPAPVQVAGLSG--VVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNR 675

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            TP  V+ LS V +V  G+ H+L    DG TVW+ G    G+LG
Sbjct: 676 STPVRVSGLSGVVSVVAGDYHSLARRSDG-TVWAWGYNGEGQLG 718



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 83/183 (45%), Gaps = 10/183 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N   QI D        P      S +  + AG + +  L S G +  +G    G
Sbjct: 555 VWAWGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSG 614

Query: 247 WLGLANTTI-QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LG  +T I +P P +V   + +VSL        H L + S+G V++WG    G+LG G+
Sbjct: 615 QLGDGSTAINKPAPVQVAGLSGVVSLG---SGNYHSLGLRSDGTVWAWGFNFDGQLGDGS 671

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L++  P  + G L G  V  V AG  HS A   DG ++ WG    G+LG G       P
Sbjct: 672 LLNRSTPVRVSG-LSG--VVSVVAGDYHSLARRSDGTVWAWGYNGEGQLGDGTRNDTLVP 728

Query: 366 TLV 368
             V
Sbjct: 729 VWV 731


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 161/351 (45%), Gaps = 24/351 (6%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG       PK I G L G  V 
Sbjct: 129 -CNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG+L S   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWH 247

Query: 384 TLVL----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T  +          S     +++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            S +V LT  G V   G      L + +     P LV   ++   ++ V+ G  HV  L+
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLT 367

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +EV+ WG    G+ G  +  +    P++V  L+D  VR I  G+ F+ A
Sbjct: 368 GRSEVFTWGKGANGRLGHGDIEDR-KVPTQVEALKDRAVRHIACGANFTAA 417



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 143/346 (41%), Gaps = 79/346 (22%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRH 223
           +L  ++   D  V H+        V+TWG +   ++    R     PRL +SL + N+  
Sbjct: 74  RLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDF 133

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + +TG L  +G G      LG        +PKR+      + ++   C  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   +TS G+++++G G  G LGHGN  S   PK +   L G +   V+ G  H+AA+ 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIV 252

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD +SR  PT V  L D     V+CG S T+
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTV 312

Query: 386 VLSQDGHT---------------------------------------------------V 394
            L+  G                                                     V
Sbjct: 313 CLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           ++ G G  G+LGH D      P  +EAL+   VR +  G +F+ A+
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 418



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 11/171 (6%)

Query: 184 SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLL 241
           SV+  K++TWG    H++    +    +P   +  +  +   +  G   T  L ++G +L
Sbjct: 262 SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVL 321

Query: 242 VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
             G    G LG  N+  + LP  V    A   +    C   HV  +T   EV++WG G +
Sbjct: 322 SMGNSVYGQLGNPNSDGR-LPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGAN 380

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           G+LGHG+   ++ P  +   L  + V  ++ G + +AA+     L+ W  G
Sbjct: 381 GRLGHGDIEDRKVPTQVE-ALKDRAVRHIACGANFTAAI----CLHKWVSG 426



 Score = 42.0 bits (97), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  +  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AACNVDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|111220973|ref|YP_711767.1| BNR repeat-containing protein [Frankia alni ACN14a]
 gi|111148505|emb|CAJ60176.1| BNR repeat domain protein (partial) [Frankia alni ACN14a]
          Length = 385

 Score =  138 bits (348), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 116/393 (29%), Positives = 179/393 (45%), Gaps = 49/393 (12%)

Query: 187 HSKVYTWGCNLHHQILD-EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           H     WG N    + D     + +  ++  L   +  + AG + + +L S G +   G 
Sbjct: 9   HIGAAAWGFNPDGALGDGSTTTRLTPVQVVGLTDGVTQVAAGGYHSVVLRSDGTVWTSGL 68

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   TT +  P  V   + +  ++    +    L + S+G V++WG   +G+LG
Sbjct: 69  NLNGELGDGTTTDRRTPGPV---SGLTGITQIAANSHFTLALRSDGTVWAWGANSYGQLG 125

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G+T  +  P + + GL G  +TQV AG +H  A+  DG ++ WG+ + G++G G   SR
Sbjct: 126 DGSTRGRNTP-VQVSGLAG--ITQVDAGAAHGLALRNDGTVWAWGDNEFGQVGDGSTTSR 182

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            TPT V+ L+ V  ++ G  H+LV+  DG  VW  G    G+LG   T   TT   + A 
Sbjct: 183 STPTQVSGLTGVTQIAAGGGHSLVVRGDG-AVWGWGLNRNGQLGDGTTRDSTT--AVRAA 239

Query: 423 RKFRVRKVCAGTSFSVALTW-----DGLVFWWG------LGLRSSSISFHTPVLVTGL-- 469
               V ++ AG + S+AL        G VF WG      LG R+ +    TPV + GL  
Sbjct: 240 GLTGVARIAAGETHSLALLGGAGLSSGQVFAWGDNSSGQLGDRTRTDRV-TPVRIPGLPP 298

Query: 470 ---------------SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
                              +  ++ G+ H LAL     V+AWG   +G    D      +
Sbjct: 299 AGATTSAAQGSGAAQGPRSVTQIATGNLHSLALLSDGTVWAWGRYPLG----DGTETTRE 354

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT-VPPSN 546
            P KV+ L    VRQ+  G  FS+A   +PP+N
Sbjct: 355 SPVKVLALSG--VRQVSGGGFFSMAVRLLPPAN 385


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 148/281 (52%), Gaps = 19/281 (6%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           L +Y  GW     LG  N++    P+  P++A   V ++   C ++H L VT  G V+SW
Sbjct: 96  LQLYSWGWGDFGRLGHGNSSDVFNPQ--PIQALQGVRITQIACGDSHCLAVTVAGHVHSW 153

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G  ++G+LG GNT     P+ I     G RV  ++AG  H+AAVTEDG LY WG G +G 
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 212

Query: 354 LGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG GD   R  P  V+ ++      V+CG  HT+ +S  G ++++ G    G+LGH D  
Sbjct: 213 LGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSG-SIYTYGWSKYGQLGHGDFE 271

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
               P  +EAL+   + ++  G   ++AL  DG ++ WG      +G+  +     +PV 
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNE-DHCSPVQ 330

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           V   +  ++V V+ G  H LAL++   V++WG  T GQ G 
Sbjct: 331 VNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 371



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 15/287 (5%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY---G 321
           EA   S+ +     +H + + S G V SWG GE G+LGHG+   +  P ++        G
Sbjct: 16  EAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPG 75

Query: 322 KRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVS 378
              + V  G  H+ A +++ L LY+WG GD GRLGHG+      P  +  L  V    ++
Sbjct: 76  GVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 135

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG+SH L ++  GH V S G    G+LG  +T     P+ I+A    RV+ + AG   + 
Sbjct: 136 CGDSHCLAVTVAGH-VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTA 194

Query: 439 ALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           A+T DG ++ WG G R  ++          P  V+ ++  ++V V+ G  H + +S    
Sbjct: 195 AVTEDGDLYGWGWG-RYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 253

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +Y +G +  GQ G  +F + +  P K+  L+D  + QI  G   ++A
Sbjct: 254 IYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQISGGWRHTMA 299



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 120/242 (49%), Gaps = 14/242 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V++WG N + Q+ L          ++Q+     ++ I AG   T  +   G L  YG GW
Sbjct: 150 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL--YGWGW 207

Query: 248 -----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                LGL +   + +P++V        + V+ C   H +TV+S G +Y++G  ++G+LG
Sbjct: 208 GRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVA-CGWRHTITVSSSGSIYTYGWSKYGQLG 266

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG+      P  +   L    ++Q+S G  H+ A+  DG LY WG    G++G GD +  
Sbjct: 267 HGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDH 325

Query: 363 HTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            +P  V       V  V+CG  HTL L++    V+S G G  G+LGH +      PK+I+
Sbjct: 326 CSPVQVNFPNEQKVVQVACGWRHTLALTE-AKNVFSWGRGTSGQLGHGEIVDRNIPKMID 384

Query: 421 AL 422
           AL
Sbjct: 385 AL 386



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 54/226 (23%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD------VG 375
           + V  +SAG SHS A+   G++ +WG G+ G+LGHGD + R  PT++T   D        
Sbjct: 20  RSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVAS 79

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            V CG  HT   S +   ++S G G+ G+LGH ++  V                      
Sbjct: 80  VVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------------------- 117

Query: 436 FSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
                                      P  +  L   +I  ++ GDSH LA++    V++
Sbjct: 118 -------------------------FNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS 152

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           WG N  GQ G  N  + +  P K+   E V V+ I AG+  + A T
Sbjct: 153 WGRNQNGQLGLGNTEDSL-LPQKIQAFEGVRVKMIAAGAEHTAAVT 197


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  138 bits (347), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 162/353 (45%), Gaps = 28/353 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG       PK I G L G  V 
Sbjct: 129 -CNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG+L S   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWH 247

Query: 384 TLVL----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T  +          S     +++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            S +V LT  G V   G      LG  +S      P LV   ++   ++ V+ G  HV  
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL--PCLVEDRIAGEHVLQVACGSYHVAV 365

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           L+  +EV+ WG    G+ G  +  +    P++V  L+D  VR I  G+ F+ A
Sbjct: 366 LTGRSEVFTWGKGANGRLGHGDIEDR-KVPTQVEALKDRAVRHIACGANFTAA 417



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 143/346 (41%), Gaps = 79/346 (22%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRH 223
           +L  ++   D  V H+        V+TWG +   ++    R     PRL +SL + N+  
Sbjct: 74  RLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDF 133

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + +TG L  +G G      LG        +PKR+      + ++   C  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   +TS G+++++G G  G LGHGN  S   PK +   L G +   V+ G  H+AA+ 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIV 252

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD +SR  PT V  L D     V+CG S T+
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTV 312

Query: 386 VLSQDGHT---------------------------------------------------V 394
            L+  G                                                     V
Sbjct: 313 CLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           ++ G G  G+LGH D      P  +EAL+   VR +  G +F+ A+
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 418



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 11/171 (6%)

Query: 184 SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLL 241
           SV+  K++TWG    H++    +    +P   +  +  +   +  G   T  L ++G +L
Sbjct: 262 SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVL 321

Query: 242 VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
             G    G LG  N+  + LP  V    A   +    C   HV  +T   EV++WG G +
Sbjct: 322 SMGNSVYGQLGNPNSDGR-LPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGAN 380

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           G+LGHG+   ++ P  +   L  + V  ++ G + +AA+     L+ W  G
Sbjct: 381 GRLGHGDIEDRKVPTQVE-ALKDRAVRHIACGANFTAAI----CLHKWVSG 426



 Score = 42.0 bits (97), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  +  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AACNVDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 148/281 (52%), Gaps = 19/281 (6%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           L +Y  GW     LG  N++    P+  P++A   V ++   C ++H L VT  G V+SW
Sbjct: 101 LQLYSWGWGDFGRLGHGNSSDVFNPQ--PIQALQGVRITQIACGDSHCLAVTVAGHVHSW 158

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G  ++G+LG GNT     P+ I     G RV  ++AG  H+AAVTEDG LY WG G +G 
Sbjct: 159 GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 217

Query: 354 LGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG GD   R  P  V+ ++      V+CG  HT+ +S  G ++++ G    G+LGH D  
Sbjct: 218 LGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSG-SIYTYGWSKYGQLGHGDFE 276

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
               P  +EAL+   + ++  G   ++AL  DG ++ WG      +G+  +     +PV 
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNE-DHCSPVQ 335

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           V   +  ++V V+ G  H LAL++   V++WG  T GQ G 
Sbjct: 336 VNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 376



 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 15/287 (5%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY---G 321
           EA   S+ +     +H + + S G V SWG GE G+LGHG+   +  P ++        G
Sbjct: 21  EAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPG 80

Query: 322 KRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVS 378
              + V  G  H+ A +++ L LY+WG GD GRLGHG+      P  +  L  V    ++
Sbjct: 81  GVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 140

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG+SH L ++  GH V S G    G+LG  +T     P+ I+A    RV+ + AG   + 
Sbjct: 141 CGDSHCLAVTVAGH-VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTA 199

Query: 439 ALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           A+T DG ++ WG G R  ++          P  V+ ++  ++V V+ G  H + +S    
Sbjct: 200 AVTEDGDLYGWGWG-RYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 258

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +Y +G +  GQ G  +F + +  P K+  L+D  + QI  G   ++A
Sbjct: 259 IYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQISGGWRHTMA 304



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 120/242 (49%), Gaps = 14/242 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V++WG N + Q+ L          ++Q+     ++ I AG   T  +   G L  YG GW
Sbjct: 155 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL--YGWGW 212

Query: 248 -----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                LGL +   + +P++V        + V+ C   H +TV+S G +Y++G  ++G+LG
Sbjct: 213 GRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVA-CGWRHTITVSSSGSIYTYGWSKYGQLG 271

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG+      P  +   L    ++Q+S G  H+ A+  DG LY WG    G++G GD +  
Sbjct: 272 HGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDH 330

Query: 363 HTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            +P  V       V  V+CG  HTL L++    V+S G G  G+LGH +      PK+I+
Sbjct: 331 CSPVQVNFPNEQKVVQVACGWRHTLALTE-AKNVFSWGRGTSGQLGHGEIVDRNIPKMID 389

Query: 421 AL 422
           AL
Sbjct: 390 AL 391



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 54/226 (23%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD------VG 375
           + V  +SAG SHS A+   G++ +WG G+ G+LGHGD + R  PT++T   D        
Sbjct: 25  RSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVAS 84

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            V CG  HT   S +   ++S G G+ G+LGH ++  V                      
Sbjct: 85  VVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------------------- 122

Query: 436 FSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
                                      P  +  L   +I  ++ GDSH LA++    V++
Sbjct: 123 -------------------------FNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS 157

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           WG N  GQ G  N  + +  P K+   E V V+ I AG+  + A T
Sbjct: 158 WGRNQNGQLGLGNTEDSL-LPQKIQAFEGVRVKMIAAGAEHTAAVT 202


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 21/300 (7%)

Query: 235 DSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           + + G L  GKG         +P P R P + A+V ++   C E H L +  +G V S G
Sbjct: 7   EGSAGQLGLGKGEGVSGPVPFRPGP-RAPADQAVVLVA---CGERHTLLLRDDGGVASCG 62

Query: 295 VGEHGKLGH----GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
               G+LG     G       P+LI   L  ++V  VS G  HS AV   G +Y+WG G 
Sbjct: 63  DNSRGQLGRRLPSGQEKRSYGPELIQA-LETQKVVHVSCGKEHSLAVCNKGRVYSWGAGT 121

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-H 407
            G+LG G+L  R  P  +  LS   V  V+CG  H++ L+ DG  ++S G    G+LG  
Sbjct: 122 FGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGR-IFSWGQNIHGQLGLG 180

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS-- 459
           +D     +P+ + AL    + +V AG + S AL+  G+V+ WG      LGL  +     
Sbjct: 181 KDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQ 240

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              P  +  L S  +  VS G  H   L+Q   VY +G ++ GQ G+++ S+P   P KV
Sbjct: 241 IFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPKFGPQKV 300



 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 120/262 (45%), Gaps = 18/262 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG---KRVTQVSAGHSHSAAVTEDGLLYTW 346
           +Y WG G  G+LG G       P     G      + V  V+ G  H+  + +DG + + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 347 GEGDHGRLGH----GDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           G+   G+LG     G  K  + P L+   E   V  VSCG+ H+L +   G  V+S G+G
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGR-VYSWGAG 120

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
             G+LG  + G    PK I AL K++V +V  G   S+ALT DG +F WG      LGL 
Sbjct: 121 TFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLG 180

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNP 512
               S  +P  V+ L    +  V+ G +H  ALS    VY WG N   Q G  Q      
Sbjct: 181 KDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAKPKEQ 240

Query: 513 VDQPSKVVGLEDVCVRQICAGS 534
           + +P  +  L  + V  +  G+
Sbjct: 241 IFKPYSIAALRSLDVAFVSCGA 262



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 18/217 (8%)

Query: 342 LLYTWGEGDHGRLG-------HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
           +LY WGEG  G+LG        G +  R  P    + + V  V+CGE HTL+L  DG  V
Sbjct: 1   MLYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVV-LVACGERHTLLLRDDG-GV 58

Query: 395 WSMGSGNLGKLGHE----DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            S G  + G+LG         +   P++I+AL   +V  V  G   S+A+   G V+ WG
Sbjct: 59  ASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWG 118

Query: 451 LG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G    L +  +     P  +  LS ++++ V+ G  H +AL+    +++WG N  GQ G
Sbjct: 119 AGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLG 178

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                +    P +V  L+ + + Q+ AG   S A ++
Sbjct: 179 LGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSL 215



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 13/206 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
            + H+  G+  +  + + G +  +G G    LG      + +PK +   +    + V+ C
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVA-C 152

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
              H + +T++G ++SWG   HG+LG G  +S +     +  L G  + QV+AG +HS A
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFA 212

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRH---TPTLVTELS--DVGAVSCGESHTLVLSQDG 391
           ++  G++Y WG  +  +LG    K +     P  +  L   DV  VSCG  HT VL+Q+G
Sbjct: 213 LSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNG 272

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPK 417
            +V++ G  + G+LG   +   ++PK
Sbjct: 273 -SVYTFGDDSAGQLGRNSS---SSPK 294



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 28/227 (12%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQ--ILDEVRGK 208
           LGDR    +   I++ S  K+       D S+A     ++++WG N+H Q  +  ++  +
Sbjct: 130 LGDRLIPKT---INALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQ 186

Query: 209 CSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRV 262
            S  ++ +L    +  + AG   +F L  +G  +VYG G      LGL+    Q  PK  
Sbjct: 187 ASPQQVSALDGIPLAQVAAGGAHSFALSLSG--VVYGWGRNNAHQLGLS----QAKPKEQ 240

Query: 263 PLE----AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
             +    AA+ SL V+   C   H   +T  G VY++G    G+LG  ++ S +     +
Sbjct: 241 IFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPKFGPQKV 300

Query: 317 GGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
             + G  V+ ++ G  H+   ++  G L ++G G   R   G  +S+
Sbjct: 301 EWIDGP-VSLLACGSYHTLVRISTSGQLLSFGRGPLQRNRSGTTQSK 346


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 11/260 (4%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           +YSWG GE G+ G+G+T  Q  P + + GL    V Q++ G  H+  +TED  +++WG G
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMP-MPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 350 DHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           D GRLGH D   ++ P LV+ L+   +  V+CG  HT  +S  G  +W+ G G  GKLGH
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTG-ALWTWGGGMYGKLGH 125

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
            +      P  +EA     V ++  G+  + AL   G V+ WG       G+  ++   +
Sbjct: 126 GNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQY 185

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            P  +  L   +I  ++    H  A++Q   +++WG    G+ GQ N  N V  P  V G
Sbjct: 186 LPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQV-TPCCVEG 244

Query: 522 LEDVCVRQICAGSLFSIAYT 541
           L+ V V+Q+  G   S   T
Sbjct: 245 LQGVRVKQVACGGFHSACVT 264



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 144/288 (50%), Gaps = 16/288 (5%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSK- 275
           +I+ +  G + T  +  TG L  +G G    LG  N    P P RV    A +   V + 
Sbjct: 92  SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVE---AFIGREVEQI 148

Query: 276 -CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            C   H   + + GEVY WG  E+G  G G     +     +  L G ++TQ++A   H+
Sbjct: 149 ACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHT 208

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           AA+T+DG L++WGEG  GRLG G+ K++ TP  V  L    V  V+CG  H+  +++DG 
Sbjct: 209 AAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDG- 267

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V + G G  G+LGH D    T P +++AL    + +V  G S +V L+ DG VF +G G
Sbjct: 268 DVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNG 327

Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
                   ++     P LV  L++ ++  V+  + H +AL    +  A
Sbjct: 328 DHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVALCHAEQEQA 375



 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 144/323 (44%), Gaps = 67/323 (20%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G  G  +T  Q +P  +P+E  +  L+V +  C   H + +T + +V+SWG G+ G+LGH
Sbjct: 17  GQCGNGSTNDQEMP--MPVEG-LKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGH 73

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD----- 358
            +   +  P L+   L GK + QV+ G  H+AA+++ G L+TWG G +G+LGHG+     
Sbjct: 74  ADNHWKYVPHLVS-ALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHP 132

Query: 359 -----------------LKSRHTPTLVTELS-------DVGAVSCGES------------ 382
                              SRHT  L+           + G    GE+            
Sbjct: 133 APCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEA 192

Query: 383 --------------HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
                         HT  ++QDG  +WS G G  G+LG  +     TP  +E L+  RV+
Sbjct: 193 LKGVKITQIAACGFHTAAITQDG-ALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVK 251

Query: 429 KVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
           +V  G   S  +T DG V  +G G           +   P LV  L    IV V+ G SH
Sbjct: 252 QVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSH 311

Query: 484 VLALSQYNEVYAWGSNTMGQCGQ 506
            + LS+  +V+ +G+   G+ G 
Sbjct: 312 TVTLSEDGKVFTFGNGDHGKLGH 334



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 8/209 (3%)

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSM 397
           D +LY+WG G+ G+ G+G    +  P  V  L    V  ++CG  HT+VL++D   VWS 
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTED-KDVWSW 63

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---- 453
           G G+ G+LGH D      P ++ AL    +++V  G+  + A++  G ++ WG G+    
Sbjct: 64  GRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKL 123

Query: 454 -RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
              + +    P  V      ++  ++ G  H  AL    EVY WG    G CG    +  
Sbjct: 124 GHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEH 183

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              P K+  L+ V + QI A    + A T
Sbjct: 184 QYLPKKLEALKGVKITQIAACGFHTAAIT 212


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 130/257 (50%), Gaps = 17/257 (6%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC-- 379
           V  ++ G +HSAA+T  G + TWG+G +GRLGHGD + +  P LV  L    A  ++C  
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G++ TL ++ D   VWS G G+ GKLG   +     P  IE+L    V KV  G+ FSVA
Sbjct: 63  GDAQTLCITDD-DNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVA 121

Query: 440 LTWDGLVFWWGLG----LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           LT  G V+ WG G    L   S+     P  V  L   +I+ ++ G  H +A S   EVY
Sbjct: 122 LTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY 181

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
            WG N  GQ G D     + +P  V  L+   + ++  GS    A+T+  S S LS    
Sbjct: 182 TWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLR 236

Query: 555 PLCVDVRPHTFTLIREF 571
           PL     P  + L+R+ 
Sbjct: 237 PL--PNPPLEYDLVRDL 251



 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 122/230 (53%), Gaps = 13/230 (5%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +S++   C  AH   +T+ G V +WG G +G+LGHG++  Q RPKL+   L G R   ++
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVE-ALLGYRAIDIA 59

Query: 329 --AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHT 384
             +G + +  +T+D  +++WG+GD+G+LG G       P  +  L+ +G V   CG   +
Sbjct: 60  CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFS 119

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           + L++ G  V++ G G+  +LGH     V  PK + AL+  ++  +  G+   VA +  G
Sbjct: 120 VALTKSG-AVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 178

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
            V+ WG      LG   +  +   P LV  L    IV V+ G +H LALS
Sbjct: 179 EVYTWGDNDEGQLG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 227


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 163/355 (45%), Gaps = 32/355 (9%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   S+  ++ HI  G     L+   G +  +G+   G LG  +    +QP      L 
Sbjct: 270 RPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPR-----LV 324

Query: 266 AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYG 321
            A+ S +V    C E H   VT  GE+Y+WG G H  G LGHG+ +S   PK I G L G
Sbjct: 325 EALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEG 384

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSC 379
            ++  V+ G  H+A VT  G L+T+G+G  G LGHGD ++   P  V  L  +   AV+C
Sbjct: 385 LQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVAC 444

Query: 380 GESHTLVL----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
           G  HT  +          S     +++ G G+  +LGH D      P  + AL      K
Sbjct: 445 GVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHK 504

Query: 430 VCAGTSFSVALTWDGLVFWWGL----GLRSSSISFHTPVLV-TGLSSHQIVDVSIGDSHV 484
           +  G S +  LT  G VF  G      L +       P LV   ++   I +++ G  HV
Sbjct: 505 IACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHV 564

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             L+  NEVY WG    G+ G  +  +    P+ V  L+D  V+ I  GS +S A
Sbjct: 565 AVLTSKNEVYTWGKGANGRLGHGDIED-RKTPALVEALKDRHVKYIACGSNYSAA 618



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 141/327 (43%), Gaps = 76/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG      +   V     +PRL ++L S  +  +  G+F +  +   G L  +G
Sbjct: 296 QGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWG 355

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKR+  PLE   + ++   C   H   VTS G+++++G G 
Sbjct: 356 DGTHNAGLLGHGSDVSHWIPKRIAGPLEG--LQIAFVACGPWHTALVTSTGQLFTFGDGT 413

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  +   P+ +   L G R   V+ G  H+AAV E            G L+TW
Sbjct: 414 FGVLGHGDRQNVSYPREVES-LLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGKLFTW 472

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDG------------- 391
           G+GD  RLGHGD ++R  PT V  L  S+   ++CG S T  L++ G             
Sbjct: 473 GDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTMGSTVYGQL 532

Query: 392 --------------------------------------HTVWSMGSGNLGKLGHEDTGKV 413
                                                 + V++ G G  G+LGH D    
Sbjct: 533 GNPQSDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDR 592

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
            TP ++EAL+   V+ +  G+++S A+
Sbjct: 593 KTPALVEALKDRHVKYIACGSNYSAAI 619


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 161/351 (45%), Gaps = 24/351 (6%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P    L  ++ H++ G     L+   G +  +G+   G LG         P+ V   AA
Sbjct: 69  KPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAA 128

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             ++    C E H   VT+ GE+Y+WG G H  G LGHG       PK I G L G  V 
Sbjct: 129 -CNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVA 187

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            VS G  H+A +T  G L+T+G+G  G LGHG+L S   P  V  LS +   AV+CG  H
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWH 247

Query: 384 TLVL----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           T  +          S     +++ G G+  +LGH D      P  + +L  +   +V  G
Sbjct: 248 TAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 434 TSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            S +V LT  G V   G      L + +     P LV   ++   ++ V+ G  HV  L+
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLT 367

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +EV+ WG    G+ G  +  +    P++V  L+D  VR I  G+ F+ A
Sbjct: 368 GRSEVFTWGKGANGRLGHGDIEDR-KVPTQVEALKDRAVRHIACGANFTAA 417



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 143/346 (41%), Gaps = 79/346 (22%)

Query: 173 KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRH 223
           +L  ++   D  V H+        V+TWG +   ++    R     PRL +SL + N+  
Sbjct: 74  RLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDF 133

Query: 224 IEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G+F T  + +TG L  +G G      LG        +PKR+      + ++   C  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   +TS G+++++G G  G LGHGN  S   PK +   L G +   V+ G  H+AA+ 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVES-LSGLKTIAVACGVWHTAAIV 252

Query: 339 E-----------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTL 385
           E            G L+TWG+GD  RLGHGD +SR  PT V  L D     V+CG S T+
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTV 312

Query: 386 VLSQDGHT---------------------------------------------------V 394
            L+  G                                                     V
Sbjct: 313 CLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           ++ G G  G+LGH D      P  +EAL+   VR +  G +F+ A+
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAI 418



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 11/171 (6%)

Query: 184 SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLL 241
           SV+  K++TWG    H++    +    +P   +  +  +   +  G   T  L ++G +L
Sbjct: 262 SVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVL 321

Query: 242 VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
             G    G LG  N+  + LP  V    A   +    C   HV  +T   EV++WG G +
Sbjct: 322 SMGNSVYGQLGNPNSDGR-LPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGAN 380

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           G+LGHG+   ++ P  +   L  + V  ++ G + +AA+     L+ W  G
Sbjct: 381 GRLGHGDIEDRKVPTQVE-ALKDRAVRHIACGANFTAAI----CLHKWVSG 426



 Score = 41.2 bits (95), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V  V  G   +  +T +G VF WG      LG  +   S H P LV  L
Sbjct: 68  PKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVH-PRLVESL 126

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           ++  +  V+ G+ H  A++   E+Y WG  T
Sbjct: 127 AACNVDFVACGEFHTCAVTTTGELYTWGDGT 157


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 164/347 (47%), Gaps = 27/347 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEA-AIVSLSVSK 275
           ++++I  G     L+   G +  +G+   G LG       P PK V  EA A +++ +  
Sbjct: 312 DVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLV--EALAHMNIELVA 369

Query: 276 CSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G    G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 370 CGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWH 429

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +  
Sbjct: 430 TAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVM 489

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + +L +    +V  G  F+VAL
Sbjct: 490 VGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVAL 549

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G L  + + ++S G  HV  L+   EVY 
Sbjct: 550 TTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 609

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           WG    G+ G  + ++  + P+ V  L+D  VR +  G  F+ A  +
Sbjct: 610 WGKGANGRLGHGD-TDDRNSPTLVEALKDKQVRSVVCGINFTAAICI 655


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 125/240 (52%), Gaps = 14/240 (5%)

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGES 382
           +AG +HSA VT  G LYTWG+G +GRLGH D + +  P LV  L      D+ A   G++
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI-ACGSGDA 59

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            TL L+ D  TVWS G G+ GKLG   +     P  I++L    V KV  G+ FSVALT 
Sbjct: 60  QTLCLTDD-DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 118

Query: 443 DGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+ WG G        S      P  V GL   +++ ++ G  H +  ++  EVY WG
Sbjct: 119 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 178

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
            N  GQ G D  +N + +P  V  L+   V ++  GS  ++A+ T  P+++    A  P+
Sbjct: 179 DNDEGQLG-DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 237



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 119/220 (54%), Gaps = 13/220 (5%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAA 336
           AH   VT+ G++Y+WG G +G+LGH ++  Q +PKL+   L G RV  ++  +G + +  
Sbjct: 5   AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE-ALQGHRVVDIACGSGDAQTLC 63

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGHTV 394
           +T+D  +++WG+GD+G+LG G       P  +  L+ +G V   CG   ++ L++ G  V
Sbjct: 64  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG-AV 122

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           ++ G G+  +LGH     V  P+ ++ L+  +V  +  G+   V  T DG V+ WG    
Sbjct: 123 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 182

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             LG   ++ +   P LV  L   ++  V+ G +H LA S
Sbjct: 183 GQLG-DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWS 221



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 10/150 (6%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGK 300
           YGK  LG   +    +P ++    ++  L V K  C     + +T  G VY+WG G++ +
Sbjct: 78  YGK--LGRGGSDGCKVPMKID---SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 132

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+    RRP+ + G L GK+V  ++ G  H    TEDG +YTWG+ D G+LG G   
Sbjct: 133 LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 191

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLS 388
           +   P LV  L    V  V+CG +HTL  S
Sbjct: 192 AIQRPRLVAALQGKKVNRVACGSAHTLAWS 221


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  137 bits (345), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 20/298 (6%)

Query: 259  PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIM 316
            PK V    A+ ++    C E H   V++ G++++WG G H  G LGHG+ LS   PK + 
Sbjct: 1245 PKLVEF-LALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVS 1303

Query: 317  GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA 376
            G + G +V  V+ G  HSA  T +G L+T+G+G  G LGHGD +S   P  V  LS +  
Sbjct: 1304 GPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKT 1363

Query: 377  --VSCGESHTL----VLSQDG-----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
              V+CG  HT+    V++Q G       +++ G G+  +LGH +      P  + +L  +
Sbjct: 1364 LKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY 1423

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTG-LSSHQIVDVSIG 480
               ++  G +F+VALT  G VF  G      L SS+     P LV   L    + ++S G
Sbjct: 1424 NFNQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCG 1483

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            D HV  L+  +EV+ WG  + G+ G  +  +    P+ V  L +  V+ I  G+  S+
Sbjct: 1484 DHHVAVLTSRSEVFTWGKGSNGRLGHGD-KDDRKTPTLVEALRERHVKSISCGADQSV 1540



 Score =  113 bits (283), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 149/324 (45%), Gaps = 38/324 (11%)

Query: 187  HSKVYTW----GCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGL 240
              +V+TW    G  L H I  +V     RP+L    +  NI  +  G++ T  + ++G L
Sbjct: 1220 QGEVFTWEEEAGGRLGHGIQVDV----CRPKLVEFLALTNIDFVACGEYHTCAVSTSGDL 1275

Query: 241  LVYGK-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
              +G      G LG  +     +PKRV  P+E   V LSV+ C   H    T+ G+++++
Sbjct: 1276 FTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQV-LSVA-CGTWHSALATANGKLFTF 1333

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLL 343
            G G  G LGHG+  S   PK +   L G +  +V+ G  H+ A+ E             L
Sbjct: 1334 GDGAFGVLGHGDRESVSYPKEVK-MLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKL 1392

Query: 344  YTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            +TWG+GD  RLGHG+ ++   PT V+ L D     ++CG + T+ L+  GH V++MG  +
Sbjct: 1393 FTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGH-VFTMGGTS 1451

Query: 402  LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SS 456
             G+LG  ++       V + L    V ++  G      LT    VF WG G         
Sbjct: 1452 HGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGD 1511

Query: 457  SISFHTPVLVTGLSSHQIVDVSIG 480
                 TP LV  L    +  +S G
Sbjct: 1512 KDDRKTPTLVEALRERHVKSISCG 1535


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  137 bits (345), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 167/355 (47%), Gaps = 32/355 (9%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLE 265
           RP   ++  ++  I  G     L+   G L  +G+   G LG  +    +QP   R+   
Sbjct: 271 RPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQP---RLVEA 327

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKR 323
            A  ++    C E H   VT  GE+Y+WG G H  G LGHG  +S   PK I G L G +
Sbjct: 328 MASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQ 387

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGE 381
           V  V+ G  H+A +T  G L+T+G+G  G LGHGD ++   P  V  LS +   AV+CG 
Sbjct: 388 VALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGV 447

Query: 382 SHT-----LVLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            HT     ++++Q   +V     ++ G G+  +LGH D      P  + +L +    ++ 
Sbjct: 448 WHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIA 507

Query: 432 AGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHV 484
            G S +V LT  G VF  G      LG   S      P LV    +   + +++ G  HV
Sbjct: 508 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL--PCLVEDKFAGESVEEIACGAYHV 565

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             L+  NEV+ WG    G+ G  +  +    P+ V  L+D  V+ I  GS +S A
Sbjct: 566 AVLTSKNEVFTWGKGANGRLGHGDVED-RKSPTLVEALKDRHVKYIACGSNYSSA 619



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 140/328 (42%), Gaps = 78/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
             +++TWG     ++   V     +PRL +++ S  +  +  G+F T  +   G L  +G
Sbjct: 297 QGELFTWGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWG 356

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG        +PKR+  PLE   V+L    C   H   +TS G+++++G G 
Sbjct: 357 DGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVT--CGPWHTALITSTGQLFTFGDGT 414

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  +   P+ +   L G R   V+ G  H+AA+ E            G L+TW
Sbjct: 415 FGVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTW 473

Query: 347 GEGDHGRLGHGD----LKSRHTPTLVTE-------------------------------- 370
           G+GD  RLGHGD    L+    P+L+ +                                
Sbjct: 474 GDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQL 533

Query: 371 ---LSD---------------VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
               SD               V  ++CG  H  VL+   + V++ G G  G+LGH D   
Sbjct: 534 GNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSK-NEVFTWGKGANGRLGHGDVED 592

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             +P ++EAL+   V+ +  G+++S A+
Sbjct: 593 RKSPTLVEALKDRHVKYIACGSNYSSAI 620


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 161/342 (47%), Gaps = 28/342 (8%)

Query: 235 DSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           + TGG L      LG+     QP   R+    A  ++ +  C E H   VT +GE+Y+WG
Sbjct: 263 EETGGRLG-----LGMGKDVTQP---RLVEALAATTVDLVACGEFHTCAVTMDGELYTWG 314

Query: 295 VGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
            G H  G LG+G  +S   PK I G L G +V  V+ G  H+A ++  G L+T+G+G  G
Sbjct: 315 DGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFG 374

Query: 353 RLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT-----LVLSQDGHTV-----WSMGSG 400
            LGHGD  S   P  V  L+ +   AV+CG  HT     ++++Q   ++     ++ G G
Sbjct: 375 VLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDG 434

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISF 460
           +  +LGH D      P  + AL  +   K+  G S ++ LT  G VF  G  +     + 
Sbjct: 435 DKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNP 494

Query: 461 HT----PVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
           H     P LV   L      +V+ G  HV+ L+  NEVY WG    G+ G  +  +    
Sbjct: 495 HADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVED-RKS 553

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
           P+ V  L+D  V+ I  GS +S A  +  S S    +    C
Sbjct: 554 PTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSAC 595



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 30/276 (10%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSR---PRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVY 243
           ++YTWG  +H+  L       S     R+  +   ++  ++  G + T L+ STG L  +
Sbjct: 309 ELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLFTF 368

Query: 244 GKGWLGL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTS-----------EGE 289
           G G  G+    +      P+ V     + +++V+ C   H   V              G+
Sbjct: 369 GDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVA-CGVWHTAAVVEVIMTQSSTSIPSGK 427

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           +++WG G+  +LGHG+   + +P  +   L      +++ GHS +  +T  G ++T G  
Sbjct: 428 LFTWGDGDKNRLGHGDKEPRLKPTCVP-ALIDYNFHKIACGHSITIGLTTSGQVFTVGSS 486

Query: 350 DHGRLG--HGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
            +G+LG  H D K    P LV +         V+CG  H +VL+   + V++ G G  G+
Sbjct: 487 VYGQLGNPHADGKQ---PCLVEDKLLGESAEEVACGAYHVMVLTSK-NEVYTWGKGANGR 542

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           LGH D     +P ++E+L+   V+ +  G+++S A+
Sbjct: 543 LGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578



 Score = 68.2 bits (165), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 94/230 (40%), Gaps = 21/230 (9%)

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQD 390
           HSA VT  G ++TWGE   GRLG G  K    P LV  L+   V  V+CGE HT  ++ D
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307

Query: 391 GH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDGLVFW 448
           G    W  G  N G LG+        PK I   L   +V  V  G   +  ++  G +F 
Sbjct: 308 GELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLFT 367

Query: 449 WGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY-----------NE 492
           +G G           S   P  V  L+  + + V+ G  H  A+ +             +
Sbjct: 368 FGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGK 427

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           ++ WG     + G  +   P  +P+ V  L D    +I  G   +I  T 
Sbjct: 428 LFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIACGHSITIGLTT 476


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 163/340 (47%), Gaps = 27/340 (7%)

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNT 306
           G+     QP   R+    +  ++ +  C E H   VT+ G++Y+WG G H  G LGHG+ 
Sbjct: 298 GIGTNVFQP---RLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 354

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +S   PK + G L G  V+ VS G  H+A +T  G LYT+G+G  G LGHG+  S   P 
Sbjct: 355 VSHWIPKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPK 414

Query: 367 LVTELSDVG--AVSCGESHT-----LVLSQDGHT---VWSMGSGNLGKLGHEDTGKVTTP 416
            V  L  +   +VSCG  HT     +++SQ   +   +++ G G+  +LGH D      P
Sbjct: 415 EVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP 474

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV-TGL 469
             + +L  +   K   G + ++ LT  G +F  G      LG  ++   +  P LV   L
Sbjct: 475 TCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRY--PRLVEEQL 532

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
               +V+V+ G  HV  L+   EVY WG  T G+ G  + ++    P+ V  L+D  V++
Sbjct: 533 GGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIAD-RKVPTLVEALKDRSVKR 591

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
           +  GS F+ A       S +  +    C   +P  FT  R
Sbjct: 592 VACGSSFTAAICQHKWVSGMEQSQCSAC--RQPFGFTRKR 629



 Score =  134 bits (337), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 162/345 (46%), Gaps = 29/345 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            ++V+TWG     ++   +     +PRL +SL + N+  I  G+F T  + +TG L  +G
Sbjct: 281 QAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWG 340

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PL+   + +S   C   H   +TS G++Y++G G 
Sbjct: 341 DGTHNAGLLGHGSNVSHWIPKRVSGPLDG--LPVSAVSCGTWHTALITSSGQLYTFGDGT 398

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------DGLLYTWGE 348
            G LGHGN  S   PK +   L G R   VS G  H+AAV E          G L+TWG+
Sbjct: 399 FGVLGHGNRASCSYPKEVE-SLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGD 457

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           GD  RLGHGD  S+  PT V  L D      +CG + T+ L+  GH ++++GS   G+LG
Sbjct: 458 GDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTTSGH-IFTVGSPVYGQLG 516

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS-FH 461
           + +        V E L    V +V  G+     LT  G V+ WG G    L    I+   
Sbjct: 517 NPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRK 576

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            P LV  L    +  V+ G S   A+ Q+  V     +    C Q
Sbjct: 577 VPTLVEALKDRSVKRVACGSSFTAAICQHKWVSGMEQSQCSACRQ 621



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 19/237 (8%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V+ V+ G  H+A VT    ++TWGE   GRLGHG   +   P LV  LS  +V  ++CGE
Sbjct: 265 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGE 324

Query: 382 SHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            HT  ++  G    W  G+ N G LGH        PK +   L    V  V  GT  +  
Sbjct: 325 FHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHTAL 384

Query: 440 LTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-----LSQ 489
           +T  G ++ +G G        +  S   P  V  L   + + VS G  H  A     +SQ
Sbjct: 385 ITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQ 444

Query: 490 YN----EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            N    +++ WG     + G  + S+ + +P+ V  L D    +   G   +I  T 
Sbjct: 445 SNASSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAACGHTLTIGLTT 500


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 27/354 (7%)

Query: 238 GGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           G +  +G+   G LG    T    PK V    A+ ++    C E H   VT+ G++Y WG
Sbjct: 244 GEVFTWGEELGGRLGHGTDTDICRPKLVE-SLAVSNVEYIACGEFHTCVVTASGDLYDWG 302

Query: 295 VGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
            G +  G LGHG  +S   PK + G L G +V  V+ G  HSA     G L+T+G+G  G
Sbjct: 303 DGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFG 362

Query: 353 RLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ---------DGHTVWSMGSGN 401
            LGHGD +S   P  V  LS   A  V+CG  H+  + +             +++ G G+
Sbjct: 363 SLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGD 422

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSS 457
             +LGH D      P  ++AL      +V  G S +VAL   G VF  G      L +  
Sbjct: 423 KNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPK 482

Query: 458 ISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                P +V     +++V ++S G +HV AL+  +EVY WG    G+ G  +  +   +P
Sbjct: 483 ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDK-KKP 541

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVR-PHTFTLIR 569
           + V  L+D  V+ I  GS F+    +   +  +S A   +C   R P  FT  R
Sbjct: 542 TLVDALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVCSGCRQPFGFTRKR 592


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 160/322 (49%), Gaps = 23/322 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A+ ++    C E H   V++ G++++WG G H  G LGHG+ LS   PK + G + G +V
Sbjct: 320 ALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQV 379

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGES 382
             V+ G  HSA  T +G L+T+G+G  G LGHGD +S   P  V  LS +    V+CG  
Sbjct: 380 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVW 439

Query: 383 HTL----VLSQDG-----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           HT+    V++Q G       +++ G G+  +LGH +      P  + +L  +   ++  G
Sbjct: 440 HTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACG 499

Query: 434 TSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            +F+VALT  G VF  G      L SS+     P LV   L    + ++S GD HV  L+
Sbjct: 500 HTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLT 559

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             +EV+ WG  + G+ G  +  +    P+ V  L +  V+ I  GS F+ +  +   +  
Sbjct: 560 SRSEVFTWGKGSNGRLGHGD-KDDRKTPTLVEALRERHVKSISCGSNFTSSICI---HKW 615

Query: 549 LSSAFTPLCVDVRPHTFTLIRE 570
           +S A   +C   R   F   R+
Sbjct: 616 VSGADQSVCSGCR-QAFGFTRK 636



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 157/348 (45%), Gaps = 38/348 (10%)

Query: 189 KVYTW----GCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLV 242
           +V+TW    G  L H I  +V     RP+L    +  NI  +  G++ T  + ++G L  
Sbjct: 290 EVFTWEEEAGGRLGHGIQVDV----CRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFT 345

Query: 243 YGK-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +G      G LG  +     +PKRV  P+E   V LSV+ C   H    T+ G+++++G 
Sbjct: 346 WGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQV-LSVA-CGTWHSALATANGKLFTFGD 403

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYT 345
           G  G LGHG+  S   PK +   L G +  +V+ G  H+ A+ E             L+T
Sbjct: 404 GAFGVLGHGDRESVSYPKEVK-MLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFT 462

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD  RLGHG+ ++   PT V+ L D     ++CG + T+ L+  GH V++MG  + G
Sbjct: 463 WGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGH-VFTMGGTSHG 521

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           +LG  ++       V + L    V ++  G      LT    VF WG G           
Sbjct: 522 QLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKD 581

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              TP LV  L    +  +S G +   ++  +  V     +    C Q
Sbjct: 582 DRKTPTLVEALRERHVKSISCGSNFTSSICIHKWVSGADQSVCSGCRQ 629


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  137 bits (344), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 179/361 (49%), Gaps = 30/361 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N   Q+ D    K   P +Q L S +  +EAG   +  + + G +  +G    G
Sbjct: 207 VWAWGANASGQLGDGTTTKRLVP-VQVL-SGVVAMEAGSGYSLAVRNDGTVWAWGYNFSG 264

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG    T +  P +V   + +V+++         L + S+G V++WG  ++G+ G G T
Sbjct: 265 QLGDDTVTSRSTPVQVLGLSEVVAVAAGSSLS---LALRSDGTVWAWGSNDYGQRGEGTT 321

Query: 307 LSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            ++  P   + + GG+       V+AG++HS AV  DG ++ WG    G+LG G   +R 
Sbjct: 322 SNRAFPVQARGLSGGV------AVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRS 375

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P  V  LS V AVS G S +L +  DG TVW+ GS   G+LG   T     P  ++ L 
Sbjct: 376 EPVQVQGLSGVVAVSAGASSSLAIRSDG-TVWAWGSNASGQLGDGTTTDRLVPVQVQGLS 434

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDVS 478
              V  V AGTSFS+A+  DG V+ WG        +F +     PV VTGLS   +V V+
Sbjct: 435 G--VVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSG--VVAVA 490

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G+ H LA+     V+A G N  GQ G  +++N    P +V GL  V    + AG   S+
Sbjct: 491 AGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNR-SAPVQVTGLSGVV--SVAAGDSHSL 547

Query: 539 A 539
           A
Sbjct: 548 A 548



 Score =  131 bits (330), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 169/361 (46%), Gaps = 28/361 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   Q+ D+     S P +Q L  S +  + AG   +  L S G +  +G    
Sbjct: 255 VWAWGYNFSGQLGDDTVTSRSTP-VQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDY 313

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G  G   T+ +  P +    +  V+++      AH L V S+G V++WG    G+LG G 
Sbjct: 314 GQRGEGTTSNRAFPVQARGLSGGVAVA---AGYAHSLAVRSDGTVWAWGSNASGQLGEGT 370

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T ++  P  + G L G  V  VSAG S S A+  DG ++ WG    G+LG G    R  P
Sbjct: 371 TSNRSEPVQVQG-LSG--VVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVP 427

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V AV  G S +L +  DG TVW  G    G+LG   +  V  P  +  L   
Sbjct: 428 VQVQGLSGVVAVVAGTSFSLAVRNDG-TVWGWGYNGYGQLGTFTSLFVLVPVQVTGLSG- 485

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQIVDVS 478
            V  V AG   S+A+  DG V  W LG          S  +   PV VTGLS   +V V+
Sbjct: 486 -VVAVAAGNLHSLAVRSDGTV--WALGRNDNGQLGDGSWTNRSAPVQVTGLSG--VVSVA 540

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            GDSH LA+     V+AWG N+ GQ G  ++      P +V GL       + A S +S+
Sbjct: 541 AGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQR-SAPVQVTGLSGRG--SVAASSDYSM 597

Query: 539 A 539
           A
Sbjct: 598 A 598



 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 164/326 (50%), Gaps = 22/326 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   Q+ +      S P ++Q L S +  + AG   +  + S G +  +G    
Sbjct: 355 VWAWGSNASGQLGEGTTSNRSEPVQVQGL-SGVVAVSAGASSSLAIRSDGTVWAWGSNAS 413

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   TT + +P +V   + +V++       +  L V ++G V+ WG   +G+LG   
Sbjct: 414 GQLGDGTTTDRLVPVQVQGLSGVVAV---VAGTSFSLAVRNDGTVWGWGYNGYGQLGTFT 470

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           +L    P  + G L G  V  V+AG+ HS AV  DG ++  G  D+G+LG G   +R  P
Sbjct: 471 SLFVLVPVQVTG-LSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAP 527

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             VT LS V +V+ G+SH+L +  DG +VW+ G  + G+LG     + + P  +  L   
Sbjct: 528 VQVTGLSGVVSVAAGDSHSLAVRYDG-SVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGR 586

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
               V A + +S+A+ +DG V+ WG      LG  ++S +   PV V  L    +V V +
Sbjct: 587 --GSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQL--RGVVAVEV 642

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCG 505
           G SH LAL     V+ WG N+ GQ G
Sbjct: 643 GSSHSLALRSDGTVWTWGYNSFGQLG 668



 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/272 (36%), Positives = 143/272 (52%), Gaps = 20/272 (7%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           +     H L + ++G V++WG   +G+LG+G+  S+  P  + G L G     V AGH H
Sbjct: 41  AAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAEPVQVQG-LSGG--VSVDAGHYH 97

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           S AV +DG ++ WG+  +G+LG G    R  P  V  LS+V AV+ G SH+L L  DG T
Sbjct: 98  SLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDG-T 156

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           VW+ G+   G+LG   T     P  +  L +  V  V AG+S S+AL  DG V+ WG   
Sbjct: 157 VWAWGANASGQLGEGTTTNRLVPVPVLGLSE--VVAVEAGSSHSLALRSDGTVWAWGANA 214

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
              LG  +++     PV V  LS   +V +  G  + LA+     V+AWG N  GQ G D
Sbjct: 215 SGQLGDGTTTKRL-VPVQV--LSG--VVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDD 269

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             ++    P +V+GL +V    + AGS  S+A
Sbjct: 270 TVTSR-STPVQVLGLSEVVA--VAAGSSLSLA 298



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 133/262 (50%), Gaps = 26/262 (9%)

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           +G V++ G    G+LG G   ++  P  ++ GL    V   +AG  HS A+  DG ++ W
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDNRSTPVQVL-GL--SEVVAAAAGSIHSLALRNDGTVWAW 60

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G   +G+LG+G L SR  P  V  LS   +V  G  H+L +  DG TVW+ G    G+LG
Sbjct: 61  GYNGYGQLGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDDG-TVWAWGDNPNGQLG 119

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
              T +   P  ++ L +  V  V AG+S S+AL  DG V+ WG      LG   ++ + 
Sbjct: 120 EGTTTRRLVPVQVQGLSE--VVAVTAGSSHSLALRSDGTVWAWGANASGQLG-EGTTTNR 176

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQPS 517
             PV V GLS  ++V V  G SH LAL     V+AWG+N  GQ G    +    PV   S
Sbjct: 177 LVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVLS 234

Query: 518 KVVGLEDVCVRQICAGSLFSIA 539
            VV +E        AGS +S+A
Sbjct: 235 GVVAME--------AGSGYSLA 248



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 11/222 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N + Q+          P   +  S +  + AG   +  + S G +   G+   G
Sbjct: 455 VWGWGYNGYGQLGTFTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNG 514

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  + T +  P +V   + +VS++     ++H L V  +G V++WG    G+LG G+ 
Sbjct: 515 QLGDGSWTNRSAPVQVTGLSGVVSVA---AGDSHSLAVRYDGSVWAWGYNSFGQLGDGSW 571

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TP 365
             QR   + + GL G+    V+A   +S AV  DG ++ WG   +G+LG G   S    P
Sbjct: 572 F-QRSAPVQVTGLSGR--GSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVP 628

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
             V +L  V AV  G SH+L L  DG TVW+ G  + G+LG+
Sbjct: 629 VQVQQLRGVVAVEVGSSHSLALRSDG-TVWTWGYNSFGQLGN 669


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  137 bits (344), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 159/338 (47%), Gaps = 23/338 (6%)

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNT 306
           G      QP   R+    +I ++ +  C E H   VT+ G++Y+WG G H  G LGHG+ 
Sbjct: 113 GTGTNVFQP---RLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 169

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +S   PK + G L G  V+ VS G  H+A +T  G LYT+G+G  G LGHG+  S   P 
Sbjct: 170 VSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPK 229

Query: 367 LVTELSDVG--AVSCGESHT-----LVLSQDGHT---VWSMGSGNLGKLGHEDTGKVTTP 416
            V  L  +   +VSCG  HT     +++SQ   +   +++ G G+  +LGH D      P
Sbjct: 230 EVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKP 289

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLV-TGLSS 471
             I +L  +   K   G + ++ LT  G +F  G      L + +     P LV   L  
Sbjct: 290 TCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPNNDGRYPRLVEEQLGG 349

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +V+V+ G  HV  L+   EVY WG    G+ G  + ++    P+ V  L D  V+++ 
Sbjct: 350 GGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIAD-RKVPTLVEALRDRSVKRVA 408

Query: 532 AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            GS F+ A       S +  +    C   +P  FT  R
Sbjct: 409 CGSSFTAAICQHKWVSGMEQSQCSAC--RQPFGFTRKR 444



 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 160/345 (46%), Gaps = 29/345 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
            S+V+TWG     ++         +PRL +SL   N+  I  G+F T  + +TG L  +G
Sbjct: 96  QSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWG 155

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PL+   + +S   C   H   +TS G++Y++G G 
Sbjct: 156 DGTHNAGLLGHGSNVSHWIPKRVSGPLDG--LPVSTVSCGTWHTALITSSGQLYTFGDGT 213

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------DGLLYTWGE 348
            G LGHGN  S   PK +   L G R   VS G  H+AAV E          G L+TWG+
Sbjct: 214 FGVLGHGNRASCSYPKEVE-SLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGD 272

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           GD  RLGHGD  S+  PT +  L D      +CG + T+ L+  GH ++++GS   G+LG
Sbjct: 273 GDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTTSGH-IFTVGSSVYGQLG 331

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS-FH 461
           + +        V E L    V +V  G+     LT  G V+ WG G    L    I+   
Sbjct: 332 NPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADRK 391

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            P LV  L    +  V+ G S   A+ Q+  V     +    C Q
Sbjct: 392 VPTLVEALRDRSVKRVACGSSFTAAICQHKWVSGMEQSQCSACRQ 436



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 19/237 (8%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V+ V+ G  H+A VT    ++TWGE   GRLGHG   +   P LV  LS  +V  ++CGE
Sbjct: 80  VSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGE 139

Query: 382 SHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            HT  ++  G    W  G+ N G LGH        PK +   L    V  V  GT  +  
Sbjct: 140 FHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTAL 199

Query: 440 LTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-----LSQ 489
           +T  G ++ +G G        +  S   P  V  L   + + VS G  H  A     +SQ
Sbjct: 200 ITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQ 259

Query: 490 YN----EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            N    +++ WG     + G  + S+ + +P+ +  L D    +   G   +I  T 
Sbjct: 260 SNASSGKLFTWGDGDKYRLGHGDRSSKL-KPTCIPSLIDYNFHKAACGHTLTIGLTT 315


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 28/388 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSK 275
           + + I  G     L+   G L  +G+   G LG    +  P PK +   + + V L+   
Sbjct: 305 DAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELA--D 362

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT+ G++Y+WG G+H  G LG G+  S  +P  I+G + G  V  +S G  H
Sbjct: 363 CGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWH 422

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVL---- 387
           +A VT  G L+T+G+G  G LGHGD  S + P  V  L+    +  +CG  H+  +    
Sbjct: 423 TAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVF 482

Query: 388 --SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
             +     +++ G G+ GKLGH D      P  +  L     ++V  G S +VAL+  G 
Sbjct: 483 GEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQ 542

Query: 446 VFWWGLGLRSSSISFHTPVLVT-GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
           V+  G    S       P  +  GL    + +V+ G  H+  L+   EVY WG  + GQ 
Sbjct: 543 VYAMGTADPSQDDVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQL 602

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHT 564
           G  + +     P+ V  L+   VR++  GS ++    +   +  ++   +  C   R H 
Sbjct: 603 GHGD-TEYRRMPTLVKALKGKQVRKVVCGSNYTATICL---HKPITGTDSSRCSGCR-HP 657

Query: 565 FTLIREFLEQYSACFETGDYIPFCSKVT 592
           F  +R+       C+  G    FC+  T
Sbjct: 658 FNYMRKLHN----CYNCGSV--FCNSCT 679



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 158/351 (45%), Gaps = 51/351 (14%)

Query: 187 HSKVYTWG-----------CNL--HHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFL 233
             ++Y+WG           C+   H +++DE  G           S +   + G+F T  
Sbjct: 322 QGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDG-----------STVELADCGEFHTCA 370

Query: 234 LDSTGGLLVYGK-----GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           + ++G L  +G      G LGL +      P R+  +   +++    C   H   VTS G
Sbjct: 371 VTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAG 430

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV-------TEDG 341
           +++++G G  G LGHG+ +S   P+ +   L G R  + + G  HSAAV       +  G
Sbjct: 431 KLFTFGDGTFGALGHGDRISTNIPREVE-ALNGCRTIRTACGVWHSAAVVSVFGEASSSG 489

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            L+TWG+GD G+LGHGD+ SR  P  VTEL  +    V+CG+S T+ LS  G  V++MG+
Sbjct: 490 KLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQ-VYAMGT 548

Query: 400 GNLGKLGHEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LR 454
            +  +   +D   V  P  IE  L K  V++V  G      L     V+ WG G    L 
Sbjct: 549 ADPSQ---DDV--VRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLG 603

Query: 455 SSSISF-HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                +   P LV  L   Q+  V  G ++   +  +  +    S+    C
Sbjct: 604 HGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSSRCSGC 654


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 159/343 (46%), Gaps = 33/343 (9%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A  +  V  C E H   VT  G++Y+WG G H  G LGHGN +S   PK + G L   RV
Sbjct: 359 ASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRV 418

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGES 382
             ++ G  H+A VT  G L+T+G+G  G LGH D +S ++P  V  L  +  V  +CG  
Sbjct: 419 ASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVW 478

Query: 383 HTLVLSQ-----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           HT  + +               +++ G G+ G+LGH D  +   P  + AL     RKV 
Sbjct: 479 HTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVA 538

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +VALT  G VF  G      L         P +V G L    + D++ G  HV  
Sbjct: 539 CGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVAC 598

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           ++  +EVY WG    G+ G  +  +  + P+ V  L++  V+ I  G+ F+ A  +   +
Sbjct: 599 VTLKSEVYTWGKGANGRLGHGDQED-RNTPTLVEALKEKQVKSIACGATFTAAVCL---H 654

Query: 547 SALSSAFTPLCVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
             LS A    C   R P +FT  R        C+  G  + FC
Sbjct: 655 KWLSGADQNACSGCRQPFSFTRKRH------NCYNCG--LVFC 689



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 257 PLPKRVPLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           PLPK   LE+AIV  +    C   H   VT +GEV++WG    G+LGHG       P+L+
Sbjct: 298 PLPK--ALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLV 355

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---E 370
              L       V+ G  H  AVT  G LYTWG+G H  G LGHG+  S   P  V    E
Sbjct: 356 E-ALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLE 414

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V +++CG  HT V++  G  +++ G G  G LGH D     +P+ +E+L+  R  + 
Sbjct: 415 EVRVASIACGPWHTAVVTTAGQ-LFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRA 473

Query: 431 CAGTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +             P  V  L  H 
Sbjct: 474 ACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHN 533

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +AL+   EV+  GS+  GQ G       +  P  V G L D  V  I  
Sbjct: 534 FRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL--PGMVEGRLVDAYVEDIAC 591

Query: 533 GS 534
           G+
Sbjct: 592 GA 593


>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1590

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 167/353 (47%), Gaps = 37/353 (10%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           ++  V+ WG N   Q+ DE     + P   S  + I  I+ G   +  L S G + V+G 
Sbjct: 579 SNGTVWAWGNNGDGQLGDETTKNRTIPAQVSNVNAITTIDGGASHSLALKSDGTVWVWGA 638

Query: 246 GW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            W   LG    T +  P ++   + I+S++   C   H + + S+G V+++G  ++G+LG
Sbjct: 639 NWDGQLGDGTNTRKTTPVQISGLSDIISIA---CGMYHSIALKSDGTVWAFGRNDYGQLG 695

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G  + + +P  + G      V  ++ G  H  A+  DG+++ WG  + G+LG G   +R
Sbjct: 696 DGTNVYRNKPVQVSG---LSDVIAIAGGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNR 752

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           +TP  V+ +S+V A++ G  H+L L  D  TVW+ GS   G+LG   T   TTP  +   
Sbjct: 753 NTPVQVSSISNVAAIARGWVHSLALKSD-ETVWAWGSNGSGQLGDGTTTNRTTP--VNIT 809

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVF----------------WWGLGLRSSSISFHTPVLV 466
               +  +  G  +++AL  DG  +                +WG   R+      TP  V
Sbjct: 810 NINNIIAIAGGGGYTIALKSDGTGWTCGEYGWDYSENNGSSYWGYSYRT------TPDQV 863

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
            G+  + +V V+ G  H++ L Q   V+ WG N  GQ G D  +   D P +V
Sbjct: 864 AGI--NDVVAVAGGWQHIVVLKQDGTVWTWGVNWYGQLG-DGTTTDRDTPVQV 913



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 15/238 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + S G V++WG    G+LG   T ++  P  +        +T +  G SHS A+  
Sbjct: 573 HSLALKSNGTVWAWGNNGDGQLGDETTKNRTIPAQVSNV---NAITTIDGGASHSLALKS 629

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG    G+LG G    + TP  ++ LSD+ +++CG  H++ L  DG TVW+ G 
Sbjct: 630 DGTVWVWGANWDGQLGDGTNTRKTTPVQISGLSDIISIACGMYHSIALKSDG-TVWAFGR 688

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
            + G+LG  D   V   K ++      V  +  G    +AL  DG+V+ WG      LG 
Sbjct: 689 NDYGQLG--DGTNVYRNKPVQVSGLSDVIAIAGGDYHCLALKSDGIVWAWGNNESGQLG- 745

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             ++ + +TPV V+ +S   +  ++ G  H LAL     V+AWGSN  GQ G    +N
Sbjct: 746 DGTTTNRNTPVQVSSIS--NVAAIARGWVHSLALKSDETVWAWGSNGSGQLGDGTTTN 801



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 17/221 (7%)

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
           +++AG  HS A+  +G ++ WG    G+LG    K+R  P  V+ ++ +  +  G SH+L
Sbjct: 566 KIAAGARHSLALKSNGTVWAWGNNGDGQLGDETTKNRTIPAQVSNVNAITTIDGGASHSL 625

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
            L  DG TVW  G+   G+LG     + TTP  I  L    +  +  G   S+AL  DG 
Sbjct: 626 ALKSDG-TVWVWGANWDGQLGDGTNTRKTTPVQISGLSD--IISIACGMYHSIALKSDGT 682

Query: 446 VFWWGLGLR-------SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           V  W  G          +++  + PV V+GLS   ++ ++ GD H LAL     V+AWG+
Sbjct: 683 V--WAFGRNDYGQLGDGTNVYRNKPVQVSGLS--DVIAIAGGDYHCLALKSDGIVWAWGN 738

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           N  GQ G    +N  + P +V  + +V    I  G + S+A
Sbjct: 739 NESGQLGDGTTTNR-NTPVQVSSISNVAA--IARGWVHSLA 776



 Score = 67.4 bits (163), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 15/239 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ +G N + Q+ D      ++P   S  S++  I  G +    L S G +  +G    G
Sbjct: 683 VWAFGRNDYGQLGDGTNVYRNKPVQVSGLSDVIAIAGGDYHCLALKSDGIVWAWGNNESG 742

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT +  P +V   ++I +++       H L + S+  V++WG    G+LG G T
Sbjct: 743 QLGDGTTTNRNTPVQV---SSISNVAAIARGWVHSLALKSDETVWAWGSNGSGQLGDGTT 799

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE-----GDHGRLGHGDLKS 361
            ++  P   +       +  ++ G  ++ A+  DG  +T GE      ++    +     
Sbjct: 800 TNRTTP---VNITNINNIIAIAGGGGYTIALKSDGTGWTCGEYGWDYSENNGSSYWGYSY 856

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           R TP  V  ++DV AV+ G  H +VL QDG TVW+ G    G+LG   T    TP  ++
Sbjct: 857 RTTPDQVAGINDVVAVAGGWQHIVVLKQDG-TVWTWGVNWYGQLGDGTTTDRDTPVQVD 914


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 173/379 (45%), Gaps = 29/379 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSK 275
           ++  I  G     L    G +  +G+   G LG         PK V  L   +V L    
Sbjct: 257 DVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLI--S 314

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT+ G++++WG G +  G LG G  +S   PK + G L G +V  V+ G  H
Sbjct: 315 CGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWH 374

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL----VL 387
           SA  T  G LYT+G+G  G LGHGD ++   P  V  LS      V+CG  H+     V 
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVT 434

Query: 388 SQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           +Q G  V     ++ G G+  +LGH D      PK ++AL ++   ++  G + +VAL  
Sbjct: 435 NQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALAT 494

Query: 443 DGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G VF  G      L +       P LV   L+S  + ++S G SHV  L+  +EVY WG
Sbjct: 495 SGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWG 554

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
               G+ G  +  +   +P  V  L+D  V+ I  GS F+    +   +  +S A   +C
Sbjct: 555 MGANGRLGHGDLKD-RKKPCLVEALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVC 610

Query: 558 VDVRPHTFTLIREFLEQYS 576
              R   F   R+  + Y+
Sbjct: 611 TGCR-QAFGFTRKRHDCYN 628


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/288 (35%), Positives = 145/288 (50%), Gaps = 18/288 (6%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR-RPKLIMGGLYGKRVT 325
           ++ S+S   C  AHV+ +TS G+  SWG G  G+LGHG  +S    PK +   L G  +T
Sbjct: 49  SLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVT-SLDGYFIT 107

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESH 383
            VSAG SHS  V++ G ++T G+G  G+LGHGD  S  +P  V+   D  V  V+CG  H
Sbjct: 108 HVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRH 167

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           +LVL + G+ V+  GSG  G+LG  ++    V  PKV+       +    A    S A++
Sbjct: 168 SLVLLK-GNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVS 226

Query: 442 WDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            DG V+ WG G +    + H P  +   SS     V++G +H LA+S   EVY  G N +
Sbjct: 227 VDGHVYTWGRGFKGFEDA-HVPQCLN--SSLNFTKVALGWNHALAMSGEGEVYMLGGNHL 283

Query: 502 GQCGQDNFSNPVDQ-PS-------KVVGLEDVCVRQICAGSLFSIAYT 541
           G         P    P        KV GL+   +  I AG+  S+  T
Sbjct: 284 GVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVT 331



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 105/233 (45%), Gaps = 17/233 (7%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTE--LSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +++WG G  G+LG   L+  H P L+ +  LS + +++CG +H + L+  G  + S G G
Sbjct: 20  VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKAL-SWGRG 78

Query: 401 NLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----R 454
           N G+LGH E       PK + +L  + +  V AG S S  ++  G VF  G G       
Sbjct: 79  NSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGH 138

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS-NPV 513
             + S  +PV V+      +  V+ G  H L L + N+VY +GS   GQ G  N     V
Sbjct: 139 GDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSV 198

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA-------YTVPPSNSALSSAFTPLCVD 559
           + P  V G E V +    A    S A       YT          A  P C++
Sbjct: 199 NVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLN 251



 Score = 57.4 bits (137), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 80/164 (48%), Gaps = 19/164 (11%)

Query: 238 GGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           G +  +G+G+ G  +  + P      L    V+L  +     H L ++ EGEVY  G   
Sbjct: 229 GHVYTWGRGFKGFEDAHV-PQCLNSSLNFTKVALGWN-----HALAMSGEGEVYMLGGNH 282

Query: 298 HGKLGHGNTL--SQRRPKL------IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            G L     +  ++  P L       + GL G ++T ++AG  HS  VTE G + TWG G
Sbjct: 283 LGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWG 342

Query: 350 DHGRLGHGDLKSRHTPTLVT---ELSDVGAVS--CGESHTLVLS 388
           +HG+LG GD + + +P  V+   +L++  ++   CG   T  ++
Sbjct: 343 EHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVT 386


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 166/335 (49%), Gaps = 27/335 (8%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           +  I  G   T ++   G L  +G    G LG+ +   +  P  V    A+    ++  +
Sbjct: 37  VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVK---ALKPEKITHVA 93

Query: 278 EA--HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
               H L VT   ++YS+G G  G LGHG+      P  I   L  K V  ++ G  HSA
Sbjct: 94  AGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIES-LEDKDVNIIACGGYHSA 152

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSR--HTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           A+T++G LY WG    G+LG   LK+     PT++     V +V+CG  HT V++ DG  
Sbjct: 153 AITKNGELYIWGSNSEGQLG---LKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGK- 208

Query: 394 VWSMGSGNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
           +++ G    GKLG  D    KVT PKV++ +   +V KV  G + +VALT  G V+ +G 
Sbjct: 209 LYTFGETEGGKLGLGDIEAHKVTKPKVVKGI-SGKVVKVACGGNHTVALTASGQVYTFGS 267

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S  +  + P LV  LS  +I  ++ G+SH   +S   E++ +G    G+ G
Sbjct: 268 GQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLG 327

Query: 506 Q--DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
           Q  ++FSN   +P KV  L++  V  I  G   +I
Sbjct: 328 QGDESFSNLF-KPVKVQRLKEFIVLHIACGGCHTI 361



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 24/284 (8%)

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSV 273
           P  I H+ AG+F T  +  +  L  +G+   G LG  + T   +P  +  LE   V++  
Sbjct: 86  PEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIA 145

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLG-HGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
             C   H   +T  GE+Y WG    G+LG   +T+S   P ++     GK V  V+ G+ 
Sbjct: 146 --CGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISY--PTMLD---LGKSVISVACGYY 198

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVTELS-DVGAVSCGESHTLVLSQ 389
           H+A VT DG LYT+GE + G+LG GD+++     P +V  +S  V  V+CG +HT+ L+ 
Sbjct: 199 HTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTA 258

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            G  V++ GSG  G+LG          PK++EAL K +++ +  G S +  ++  G +F 
Sbjct: 259 SGQ-VYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFT 317

Query: 449 WG------LGLRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVL 485
           +G      LG    S S    PV V  L    ++ ++ G  H +
Sbjct: 318 FGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTI 361



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 117/221 (52%), Gaps = 14/221 (6%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG 380
           +VT ++ G  H+  VTE+G L+T+G  + G+LG G  K+R+ PT V  L    +  V+ G
Sbjct: 36  KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             HTL ++ D + ++S G G+ G LGH D   +  P  IE+L    V  +  G   S A+
Sbjct: 96  RFHTLAVT-DSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAI 154

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T +G ++ WG      LGL++ +IS+ T +L  G S   ++ V+ G  H   ++   ++Y
Sbjct: 155 TKNGELYIWGSNSEGQLGLKNDTISYPT-MLDLGKS---VISVACGYYHTAVVTADGKLY 210

Query: 495 AWGSNTMGQCG-QDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            +G    G+ G  D  ++ V +P  V G+    V+  C G+
Sbjct: 211 TFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGN 251



 Score = 90.5 bits (223), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 14/210 (6%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
           + ++Y WG N   Q L       S P +  L  ++  +  G + T ++ + G L  +G+ 
Sbjct: 157 NGELYIWGSNSEGQ-LGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGET 215

Query: 246 --GWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKL 301
             G LGL +     + K  P     +S  V K  C   H + +T+ G+VY++G G++G+L
Sbjct: 216 EGGKLGLGDIEAHKVTK--PKVVKGISGKVVKVACGGNHTVALTASGQVYTFGSGQNGQL 273

Query: 302 GHGNTLSQRR-PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD-- 358
           G G+ +     PKL+   L  +++  ++ G SH+A V++ G L+T+G+G HG+LG GD  
Sbjct: 274 GLGSKIMDSNIPKLVEA-LSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDES 332

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLV 386
             +   P  V  L +  V  ++CG  HT+V
Sbjct: 333 FSNLFKPVKVQRLKEFIVLHIACGGCHTIV 362


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 149/280 (53%), Gaps = 21/280 (7%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N++    P+  P++A +  L + +  C ++H L VT +GEV SWG
Sbjct: 90  VYSWGWGDFGRLGHGNSSDLFTPQ--PIKA-LHGLRIKQIACGDSHCLAVTMDGEVQSWG 146

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ I     G  V  V+AG  H+AAVTEDG LY WG G +G L
Sbjct: 147 RNQNGQLGLGTTEDSLVPQKIQA-FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNL 205

Query: 355 GHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+ +  V    V+CG  HT+ +S  G  +++ G    G+LGH D   
Sbjct: 206 GLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDFED 264

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
             TP  +EAL++  + ++  G   ++ALT DG ++ WG      +G+   ++   +PV V
Sbjct: 265 HLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GDNVDHCSPVQV 323

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                 ++V +S G  H LA+++   V++WG  T GQ G 
Sbjct: 324 KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 363



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 137/272 (50%), Gaps = 13/272 (4%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H + + S   V SWG GE G+LGHG+   +  P  +   L G  V  V+ G  H+ A +
Sbjct: 26  SHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLS-ALDGHEVVSVTCGADHTTAYS 84

Query: 339 ED-GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
           E    +Y+WG GD GRLGHG+     TP  +  L    +  ++CG+SH L ++ DG  V 
Sbjct: 85  ESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGE-VQ 143

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
           S G    G+LG   T     P+ I+A +   V+ V AG   + A+T DG ++ WG G R 
Sbjct: 144 SWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWG-RY 202

Query: 456 SSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            ++          P  V+ +   ++V V+ G  H +++S    +Y +G +  GQ G  +F
Sbjct: 203 GNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDF 262

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            + +  P K+  L++  + +I  G   ++A T
Sbjct: 263 EDHL-TPHKLEALQENLISEISGGWRHTMALT 293



 Score =  115 bits (287), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 123/226 (54%), Gaps = 10/226 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           +RV  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L   +V +V+C
Sbjct: 16  RRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S+    V+S G G+ G+LGH ++  + TP+ I+AL   R++++  G S  +A
Sbjct: 76  GADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLA 135

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T DG V  WG      LGL ++  S   P  +       +  V+ G  H  A+++  E+
Sbjct: 136 VTMDGEVQSWGRNQNGQLGLGTTEDSL-VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 194

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           Y WG    G  G  + ++ +  P KV  +E V + ++  G   +I+
Sbjct: 195 YGWGWGRYGNLGLGDRNDRL-VPEKVSTVEGVKMVKVACGWRHTIS 239



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+    +++ + AG   T  +   G L  YG 
Sbjct: 140 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL--YGW 197

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P++V     +  + V+ C   H ++V+S G +Y++G  ++G+
Sbjct: 198 GWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVA-CGWRHTISVSSSGGLYTYGWSKYGQ 256

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++++S G  H+ A+T DG LY WG    G++G GD  
Sbjct: 257 LGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV 315

Query: 361 SRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              +P  V       V  +SCG  HTL +++    V+S G G  G+LGH ++     PK+
Sbjct: 316 DHCSPVQVKFPHEQKVVHISCGWRHTLAVTER-QNVFSWGRGTNGQLGHGESIDRNIPKM 374

Query: 419 IEAL 422
           IE L
Sbjct: 375 IEVL 378



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 11/196 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA--GQFCTFLLDSTGGLLVYG- 244
            ++Y WG   +  +    R     P   S    ++ ++   G   T  + S+GGL  YG 
Sbjct: 192 GELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGW 251

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGK 300
              G LG  +      P +  LEA   +L +S+ S    H + +TS+G++Y WG  + G+
Sbjct: 252 SKYGQLGHGDFEDHLTPHK--LEALQENL-ISEISGGWRHTMALTSDGKLYGWGWNKFGQ 308

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +G G+ +    P  +    + ++V  +S G  H+ AVTE   +++WG G +G+LGHG+  
Sbjct: 309 VGVGDNVDHCSPVQVKF-PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESI 367

Query: 361 SRHTPTLVTELSDVGA 376
            R+ P ++  LS  G+
Sbjct: 368 DRNIPKMIEVLSADGS 383


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 169/375 (45%), Gaps = 30/375 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G    +G+   G LG    T    PK +     + ++ +  C
Sbjct: 309 DVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGM-NVELIAC 367

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VTS G++Y+WG G    G LGH +  S   PK + G + G RV+ VS G  H+
Sbjct: 368 GEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHT 427

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ--- 389
           A +T  G L+T+G+G  G LGHGD     TP  V   + +    V+CG  HT  + +   
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMS 487

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                       T+++ G G+ GKLGH D      P+ I AL      +V    + +VAL
Sbjct: 488 GLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L     +  +P+ V   L    + ++S G  HV  L+   EVY 
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    GQ G  +  N    P+ V  L D  V++I  GS FS A  V   N AL SA   
Sbjct: 608 WGKGENGQLGHGDCENKC-TPTLVDILRDKQVKRIVCGSNFSAAICV--HNWAL-SADNS 663

Query: 556 LCVDVR-PHTFTLIR 569
           +C   R P  F   R
Sbjct: 664 ICFGCRIPFNFRRKR 678


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 159/316 (50%), Gaps = 28/316 (8%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           + +  +EAG F +  L S G +  +G    G LG   TT +  P +V     +V+++   
Sbjct: 67  TGVVAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAIA--- 123

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS--- 332
               H L + S+G V++WG   +G+LG G   ++  P  +      K +T V A  +   
Sbjct: 124 AGGGHSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQV------KNLTGVVAVAAGGG 177

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           HS A+  DG ++ WG   +G+LG G   +R+TP  V  L+ V A++ G SH+L L  DG 
Sbjct: 178 HSLALKSDGTVWAWGYNGYGQLGDGTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDG- 236

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TVW+ G+   G+LG   T   TTP  ++ L    V  + AG   S+AL  DG V+ WG  
Sbjct: 237 TVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTD--VVAIAAGNEHSLALKSDGTVWTWGWN 294

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG   ++ + +TPV V  L+   +V ++ G  H LAL     V+AWG+N  G+ G 
Sbjct: 295 YSGQLG-DGTTTNRYTPVQVQNLTG--VVAIAAGGGHSLALKSDGTVWAWGNNDWGELG- 350

Query: 507 DNFSNPVDQPSKVVGL 522
           D        P +V GL
Sbjct: 351 DGTRTDRHTPVQVSGL 366



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 147/293 (50%), Gaps = 19/293 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-KGW 247
           V+ WG N + Q+ D        P ++Q+L + +  I AG   +  L S G +  +G  G+
Sbjct: 88  VWAWGDNYYGQLGDGTTTNRYTPVQVQNL-TGVVAIAAGGGHSLALKSDGTVWAWGYNGY 146

Query: 248 LGLANTTIQPLPKRVPLEAA-IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             L + TI    +  P++   +  +        H L + S+G V++WG   +G+LG G T
Sbjct: 147 GQLGDGTI--TNRTTPVQVKNLTGVVAVAAGGGHSLALKSDGTVWAWGYNGYGQLGDGTT 204

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +++  P  +   L G  V  ++AG SHS A+  DG ++ WG   +G+LG G   +R TP 
Sbjct: 205 MNRYTPVQVQN-LTG--VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPV 261

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L+DV A++ G  H+L L  DG TVW+ G    G+LG   T    TP  ++ L    
Sbjct: 262 RVQGLTDVVAIAAGNEHSLALKSDG-TVWTWGWNYSGQLGDGTTTNRYTPVQVQNLTG-- 318

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
           V  + AG   S+AL  DG V+ WG      LG   +    HTPV V+GL+  Q
Sbjct: 319 VVAIAAGGGHSLALKSDGTVWAWGNNDWGELG-DGTRTDRHTPVQVSGLNLGQ 370



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 138/266 (51%), Gaps = 18/266 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           + L + S+G V++WG   +G+LG G T ++  P  +   L G  V  ++AG  HS A+  
Sbjct: 78  YSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQN-LTG--VVAIAAGGGHSLALKS 134

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   +G+LG G + +R TP  V  L+ V AV+ G  H+L L  DG TVW+ G 
Sbjct: 135 DGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGGHSLALKSDG-TVWAWGY 193

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T    TP  ++ L    V  + AG+S S+AL  DG V+ WG      LG 
Sbjct: 194 NGYGQLGDGTTMNRYTPVQVQNLTG--VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLG- 250

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             ++ +  TPV V GL+   +V ++ G+ H LAL     V+ WG N  GQ G    +N  
Sbjct: 251 DGTTTNRTTPVRVQGLT--DVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRY 308

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
             P +V  L  V    I AG   S+A
Sbjct: 309 -TPVQVQNLTGVVA--IAAGGGHSLA 331



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 33/270 (12%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
              A  L + S+G V++WG         G  +  +        L G  V  V AG  +S 
Sbjct: 39  AGGARSLAIKSDGTVWAWG---------GTPVPVQN-------LTG--VVAVEAGSFYSL 80

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           A+  DG ++ WG+  +G+LG G   +R+TP  V  L+ V A++ G  H+L L  DG TVW
Sbjct: 81  ALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQNLTGVVAIAAGGGHSLALKSDG-TVW 139

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
           + G    G+LG       TTP  ++ L              S+AL  DG V+ WG     
Sbjct: 140 AWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGG--GHSLALKSDGTVWAWGYNGYG 197

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LG   ++++ +TPV V  L+   +V ++ G SH LAL     V+AWG+N  GQ G    
Sbjct: 198 QLG-DGTTMNRYTPVQVQNLTG--VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTT 254

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +N    P +V GL DV    I AG+  S+A
Sbjct: 255 TNRT-TPVRVQGLTDVVA--IAAGNEHSLA 281



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 8/140 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N + Q+ D      + P R+Q L +++  I AG   +  L S G +  +G    
Sbjct: 238 VWAWGNNGYGQLGDGTTTNRTTPVRVQGL-TDVVAIAAGNEHSLALKSDGTVWTWGWNYS 296

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   TT +  P +V     +V+++       H L + S+G V++WG  + G+LG G 
Sbjct: 297 GQLGDGTTTNRYTPVQVQNLTGVVAIA---AGGGHSLALKSDGTVWAWGNNDWGELGDGT 353

Query: 306 TLSQRRPKLIMGGLYGKRVT 325
              +  P  + G   G++ T
Sbjct: 354 RTDRHTPVQVSGLNLGQQTT 373


>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
 gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
          Length = 575

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 174/381 (45%), Gaps = 45/381 (11%)

Query: 188 SKVYTWGCNLHHQI--LDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVY 243
           + VY WG N + Q+  ++        P +  + SN++   + AG  CTF++ + G + V 
Sbjct: 179 TTVYAWGANRYSQLGGINLKEDTVLVPTVNEIMSNLKPNMMTAGLGCTFIVTNDGCIYVC 238

Query: 244 GKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G G    LGL       +P+ + L+  I  ++   C + H L +T  G V SWG   +G+
Sbjct: 239 GHGQDGRLGLGTVNHVVIPRPIHLKVFITKVASFYCGQ-HALALTGNGIVLSWGSNIYGQ 297

Query: 301 LGHGN----TLSQ---------RRPK--------------LIMGGLYGKRVTQVSAGHSH 333
           LGHG+    T SQ          +P               +++  +  K +  ++ G   
Sbjct: 298 LGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVIDTISSKHIVDIACGSDS 357

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDG 391
           SAA+++ G L+TWG G  G LGHGD ++   P  V    D  V  V+CG  H L +    
Sbjct: 358 SAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEAFKDYHVSKVACGCWHMLAIVNQ- 416

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
           + +WS G G+ G+LG+  +     P ++E L      KV  G   S AL+ DG ++ WG 
Sbjct: 417 NRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWDISFALSQDGYIWSWGY 476

Query: 452 GL-----RSSSISFHTPVLVTGLSSH--QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                    S +    P L+  L+    +IVD+   + H +AL+   E+Y WG+N  G+ 
Sbjct: 477 NGDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGASNCHCVALAADGELYLWGANDKGRL 536

Query: 505 GQDNFSNPVDQPSKVVGLEDV 525
           G  +     + P     L DV
Sbjct: 537 GNGSDIKDCNFPKPCTALADV 557



 Score = 42.4 bits (98), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 12/132 (9%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSNI-RHIEAGQFCTFLLDSTGGLLV 242
           V  +++++WG   + Q+ +     C +P L + LP  +   +  G   +F L   G +  
Sbjct: 414 VNQNRIWSWGHGHYGQLGNGQSANCLQPILVEQLPHILWAKVICGWDISFALSQDGYIWS 473

Query: 243 YGKGWLGLANTTI-------QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +G     + N          Q L +    +  IV L  S C   H + + ++GE+Y WG 
Sbjct: 474 WGYNGDFMVNECSRLIVDEPQLLYRLADQDKKIVDLGASNC---HCVALAADGELYLWGA 530

Query: 296 GEHGKLGHGNTL 307
            + G+LG+G+ +
Sbjct: 531 NDKGRLGNGSDI 542


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 176/386 (45%), Gaps = 25/386 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           + + I  G     L+   G +  +G+   G LG    +  P PK +  E    ++ ++ C
Sbjct: 297 DAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLID-EFNGSTVELADC 355

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT+ G++Y+WG G+H  G LG G+  S  +P  I+G + G  V  +S G  H+
Sbjct: 356 GEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHT 415

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVL----- 387
           A VT +G L+T+G+G  G LGHGD  S + P  V  L+    +  +CG  H+  +     
Sbjct: 416 AFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFG 475

Query: 388 -SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
            +     +++ G G+ G+LGH D      P  +  L     ++V  G S +VAL+  G V
Sbjct: 476 EATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQV 535

Query: 447 FWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           +  G    S  I      +  GL    + +V+ G  H+  L+   EVY WG  + GQ G 
Sbjct: 536 YAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGH 595

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFT 566
            +       P+ V  L+   VR++  GS ++    +   +  ++   +  C   R H F 
Sbjct: 596 GDTEYRC-MPTLVKALKGKQVRKVVCGSNYTATICL---HKPITGTDSTKCSGCR-HPFN 650

Query: 567 LIREFLEQYSACFETGDYIPFCSKVT 592
            +R+       C+  G    FC+  T
Sbjct: 651 YMRKLHN----CYNCGSV--FCNSCT 670



 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 52/349 (14%)

Query: 189 KVYTWG-----------CNL--HHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLD 235
           ++Y+WG           C+   H +++DE  G           S +   + G+F T  + 
Sbjct: 316 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNG-----------STVELADCGEFHTCAVT 364

Query: 236 STGGLLVYGK-----GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV 290
           ++G L  +G      G LGL +      P R+  +   + +    C   H   VTSEG++
Sbjct: 365 ASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKL 424

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV-------TEDGLL 343
           +++G G  G LGHG+ +S   P+ +   L G R  + + G  HSAAV       T  G L
Sbjct: 425 FTFGDGTFGALGHGDRISTNIPREVE-ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKL 483

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           +TWG+GD GRLGHGD++ R  P+ VTEL  +    V+CG+S T+ LS  G  V++MG+ +
Sbjct: 484 FTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ-VYAMGTAD 542

Query: 402 LGKLGHEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSS 456
                H+    V  P  IE  L K  V++V  G      L     V+ WG G    L   
Sbjct: 543 ---PSHD---IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 596

Query: 457 SISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
              +   P LV  L   Q+  V  G ++   +  +  +    S     C
Sbjct: 597 DTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGC 645


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 179/385 (46%), Gaps = 35/385 (9%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLAN--TTIQPLPKRVPLE 265
           +P   +L  +  H++ G   + L+   G +  +G+   G LG  +   +I P   R+   
Sbjct: 69  KPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHP---RLIES 125

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+ ++ +  C E H   VT+ GE+Y+WG G H  G LGHG  +S   PK I G L G  
Sbjct: 126 LAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLA 185

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGE 381
           V  VS G  H+A +T  G L+T+G+G  G LGHG+ +S   P  V  LS +   +V+CG 
Sbjct: 186 VAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVACGV 245

Query: 382 SHT-----LVLSQDGHT-----VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            HT     ++++Q   +     +++ G G+  +LGH D      P  + +L  +   ++ 
Sbjct: 246 WHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIA 305

Query: 432 AGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
            G S +V LT  G V   G      LG   S      P LV  +    +V V+ G  HV 
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKI--PCLVEEIVGENVVQVACGSYHVA 363

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            L+  +EV+ WG    G+ G  +  +    P+ V  L D  VR I  G+ F+ A      
Sbjct: 364 VLTIKSEVFTWGKGANGRLGHGDIEDR-KIPTLVEALRDRSVRHIACGANFTAAIC---Q 419

Query: 546 NSALSSAFTPLCVDVR-PHTFTLIR 569
           +  +S A    C   R P  FT  R
Sbjct: 420 HKWVSGAEQSQCASCRQPFGFTRKR 444



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 138/336 (41%), Gaps = 78/336 (23%)

Query: 182 DISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTF 232
           D  V HS       +V+TWG     ++    R     PRL +SL   N+  +  G+F T 
Sbjct: 83  DCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTC 142

Query: 233 LLDSTGGLLVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
            + + G L  +G G      LG        +PKR+      ++++   C   H   +T+ 
Sbjct: 143 AVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTM 202

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-------- 339
           G+++++G G  G LGHGN  S   PK +   L G +   V+ G  H+AA+ E        
Sbjct: 203 GQLFTFGDGTFGVLGHGNRESISCPKEVES-LSGLKTISVACGVWHTAAIVEVIVTQSSS 261

Query: 340 ---DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT- 393
               G L+TWG+GD  RLGHGD + R  PT V  L   D   ++CG S T+ L+  G   
Sbjct: 262 SISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVL 321

Query: 394 -------------------------------------------------VWSMGSGNLGK 404
                                                            V++ G G  G+
Sbjct: 322 SMGNTVYGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGR 381

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           LGH D      P ++EALR   VR +  G +F+ A+
Sbjct: 382 LGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAI 417


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 157/333 (47%), Gaps = 31/333 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G H  G LGHGN +S   PK + G L G RV+ V+ G  H
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWH 241

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVL---- 387
           +  VT  G L+++G+G  G LGHGD KS   P  V  L  +  +  +CG  HT  +    
Sbjct: 242 TVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM 301

Query: 388 ---SQDGHT----VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              S  G +    +++ G G+  +LGH D  +   P  + AL     R+V  G S +VAL
Sbjct: 302 SRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVAL 361

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           T  G ++  G      L     +   P ++  L    I +VS G  HV AL+   +V  W
Sbjct: 362 TTTGHLYTMGSVSYGQLGDPQATGRLPGVLR-LGRTLIEEVSCGAYHVAALTSKGDVCTW 420

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G  +  +  D PS V  L D  V+++  GS F+ A  +  S   + +  + +
Sbjct: 421 GKGANGRLGHGDAED-RDVPSLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGNS-M 478

Query: 557 CVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
           C   R P  FT       +   C+  G  +P+C
Sbjct: 479 CSGCRQPFGFT------RKKHNCYNCG--LPYC 503



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 159/330 (48%), Gaps = 36/330 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++   V    + P+L  SL S+ ++++  G++ +  +  +G L  +G
Sbjct: 141 QGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWG 200

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N      PKRV  PLE   V +S   C   H + VTS G+++S+G G 
Sbjct: 201 DGTHNFGLLGHGNNISHWTPKRVGGPLEG--VRVSSVACGPWHTVLVTSTGQLFSFGDGT 258

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G +  + + G  H+AAV E             G L+T
Sbjct: 259 FGVLGHGDRKSASMPREVE-SLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFT 317

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD  RLGHGD + +  PT V  L D     V+CG S T+ L+  GH +++MGS + G
Sbjct: 318 WGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGH-LYTMGSVSYG 376

Query: 404 KLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSS 457
           +LG  + TG++  P V+   R   + +V  G     ALT  G V  WG G         +
Sbjct: 377 QLGDPQATGRL--PGVLRLGRTL-IEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDA 433

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
                P LV  L   Q+  VS G S   A+
Sbjct: 434 EDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 22/240 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGE 381
           V Q++ G  H+A VT  G +++WGE   GRLGHG       P L+  L  S V  V+CGE
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGE 184

Query: 382 SHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            H+  ++Q G    W  G+ N G LGH +     TPK +   L   RV  V  G   +V 
Sbjct: 185 YHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVL 244

Query: 440 LTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA----LSQY 490
           +T  G +F +G G           S   P  V  L   + +  + G  H  A    +S+Y
Sbjct: 245 VTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRY 304

Query: 491 N--------EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           +        +++ WG     + G  +    +  P+ V  L D   RQ+  G   ++A T 
Sbjct: 305 SNAGSSLSGKLFTWGDGDKNRLGHGDKEQKL-VPTCVAALVDHNFRQVACGHSLTVALTT 363


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 176/386 (45%), Gaps = 25/386 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           + + I  G     L+   G +  +G+   G LG    +  P PK +  E    ++ ++ C
Sbjct: 300 DAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLID-EFNGSTVELADC 358

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT+ G++Y+WG G+H  G LG G+  S  +P  I+G + G  V  +S G  H+
Sbjct: 359 GEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHT 418

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVL----- 387
           A VT +G L+T+G+G  G LGHGD  S + P  V  L+    +  +CG  H+  +     
Sbjct: 419 AFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFG 478

Query: 388 -SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
            +     +++ G G+ G+LGH D      P  +  L     ++V  G S +VAL+  G V
Sbjct: 479 EATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQV 538

Query: 447 FWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           +  G    S  I      +  GL    + +V+ G  H+  L+   EVY WG  + GQ G 
Sbjct: 539 YAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGH 598

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFT 566
            +       P+ V  L+   VR++  GS ++    +   +  ++   +  C   R H F 
Sbjct: 599 GDTEYRC-MPTLVKALKGKQVRKVVCGSNYTATICL---HKPITGTDSTKCSGCR-HPFN 653

Query: 567 LIREFLEQYSACFETGDYIPFCSKVT 592
            +R+       C+  G    FC+  T
Sbjct: 654 YMRKLHN----CYNCGSV--FCNSCT 673



 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 52/349 (14%)

Query: 189 KVYTWG-----------CNL--HHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLD 235
           ++Y+WG           C+   H +++DE  G           S +   + G+F T  + 
Sbjct: 319 QMYSWGEESGGRLGHGVCSYVPHPKLIDEFNG-----------STVELADCGEFHTCAVT 367

Query: 236 STGGLLVYGK-----GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV 290
           ++G L  +G      G LGL +      P R+  +   + +    C   H   VTSEG++
Sbjct: 368 ASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKL 427

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV-------TEDGLL 343
           +++G G  G LGHG+ +S   P+ +   L G R  + + G  HSAAV       T  G L
Sbjct: 428 FTFGDGTFGALGHGDRISTNIPREVE-ALNGCRTIKAACGVWHSAAVVSVFGEATSSGKL 486

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           +TWG+GD GRLGHGD++ R  P+ VTEL  +    V+CG+S T+ LS  G  V++MG+ +
Sbjct: 487 FTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ-VYAMGTAD 545

Query: 402 LGKLGHEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSS 456
                H+    V  P  IE  L K  V++V  G      L     V+ WG G    L   
Sbjct: 546 ---PSHD---IVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 599

Query: 457 SISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
              +   P LV  L   Q+  V  G ++   +  +  +    S     C
Sbjct: 600 DTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGC 648


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 19/308 (6%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  N  I   P  +    +++S++       H + +TS  +VYS G  E G+LG
Sbjct: 9   YGQLGLGSENMLIS-CPSPIDANQSVISIA---SGLRHTVYLTSTRKVYSCGSNEFGQLG 64

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                SQ RP L+  G   + +  V+AG   S A+ E GLL+ WG   +G L      S 
Sbjct: 65  QQK--SQCRPSLVT-GFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL-MCKQDSL 120

Query: 363 HTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVI 419
           H P L+ ++    V  V+CG  H + L+++G T+ S GS   G+LG   +  +   P +I
Sbjct: 121 HEPKLLDKIMHWSVVQVACGAQHCIALTEEG-TILSWGSNTQGQLGLGSSEIEFLEPTII 179

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
            +L  F + ++CAG   S  L+  G +F WG      LG  +S     +P LV  L   +
Sbjct: 180 ASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQE 239

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           +V V++G+ H +  ++   V++WG    GQ G ++ +N V QP K++ L    V QIC G
Sbjct: 240 VVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMAN-VTQPKKIMELMGTTVCQICCG 298

Query: 534 SLFSIAYT 541
              +I+ T
Sbjct: 299 RRHTISLT 306



 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 15/272 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           KVY+ G N   Q L + + +C RP L +      I H+ AG F +  +  +G L  +G+ 
Sbjct: 51  KVYSCGSNEFGQ-LGQQKSQC-RPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRS 108

Query: 247 WLGLANTTIQPL--PKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G        L  PK   L   I+  SV +  C   H + +T EG + SWG    G+LG
Sbjct: 109 LNGELMCKQDSLHEPK---LLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLG 165

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS- 361
            G++  +     I+  L    ++Q+ AG  HS  ++  G L+TWG+ + G+LGHG+  S 
Sbjct: 166 LGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSF 225

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           + +P LV  L   +V  V+ GE H++  +++G  V+S G G  G+LGH     VT PK I
Sbjct: 226 QSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNG-GVFSWGHGGNGQLGHNSMANVTQPKKI 284

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             L    V ++C G   +++LT    +  +GL
Sbjct: 285 MELMGTTVCQICCGRRHTISLTDKRKLLGFGL 316



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 343 LYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           +Y WG+ D+G+LG G        P+ +     V +++ G  HT+ L+     V+S GS  
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDANQSVISIASGLRHTVYLTST-RKVYSCGSNE 59

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI--- 458
            G+LG + +     P ++       +  V AG  FS+A+   GL+F WG  L    +   
Sbjct: 60  FGQLGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQ 117

Query: 459 -SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            S H P L+  +    +V V+ G  H +AL++   + +WGSNT GQ G  +      +P+
Sbjct: 118 DSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPT 177

Query: 518 KVVGLEDVCVRQICAGSLFS 537
            +  L    + QICAG+  S
Sbjct: 178 IIASLNAFPISQICAGAYHS 197



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 16/261 (6%)

Query: 290 VYSWGVGEHGKLGHGN-TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           +Y WG  ++G+LG G+  +    P  I      + V  +++G  H+  +T    +Y+ G 
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDAN---QSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 349 GDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            + G+LG    KS+  P+LVT     ++  V+ G+  ++ +++ G       S N   + 
Sbjct: 58  NEFGQLGQQ--KSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            +D+  +  PK+++ +  + V +V  G    +ALT +G +  WG      LGL SS I F
Sbjct: 116 KQDS--LHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEF 173

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
             P ++  L++  I  +  G  H   LS    ++ WG N  GQ G  N  +    P  V 
Sbjct: 174 LEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVK 233

Query: 521 GLEDVCVRQICAGSLFSIAYT 541
            L    V  +  G   S+  T
Sbjct: 234 TLRHQEVVFVAMGEEHSVCRT 254


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 169/375 (45%), Gaps = 30/375 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G    +G+   G LG    T    PK +     + ++ +  C
Sbjct: 309 DVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGM-NVELIAC 367

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VTS G++Y+WG G    G LGH +  S   PK + G + G RV+ VS G  H+
Sbjct: 368 GEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHT 427

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ--- 389
           A +T  G L+T+G+G  G LGHGD     TP  V   + +    V+CG  HT  + +   
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWHTAAVVELMS 487

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                       T+++ G G+ GKLGH D      P+ I AL      +V    + +VAL
Sbjct: 488 GLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L     +  +P+ V   L    + ++S G  HV  L+   EVY 
Sbjct: 548 TTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYT 607

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    GQ G  +  N    P+ V  L D  V++I  GS FS A  V   N AL SA   
Sbjct: 608 WGKGENGQLGHGDCENKC-TPTLVDILRDKQVKRIVCGSNFSAAICV--HNWAL-SADNS 663

Query: 556 LCVDVR-PHTFTLIR 569
           +C   R P  F   R
Sbjct: 664 ICFGCRIPFNFRRKR 678


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 144/293 (49%), Gaps = 22/293 (7%)

Query: 242 VYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N+T    P P +      I  L+   C ++H L VT  GEV SWG
Sbjct: 88  VYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA---CGDSHCLAVTMAGEVLSWG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ I     G  V  ++AG  H+AAVTEDG +Y WG G +G L
Sbjct: 145 RNQNGQLGLGTTEDSLLPQTIQA-FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+  E   +  V+CG  HT+ +S  G ++++ G    G+LGH D   
Sbjct: 204 GLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSG-SLYTYGWSKYGQLGHGDFED 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVT 467
              P  +EAL+     ++  G   ++ALT DG ++ WG      + +   + H +P  V 
Sbjct: 263 HLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVN 322

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
                ++  V+ G  H LA ++   V+AWG  T GQ G       VD+ + V+
Sbjct: 323 FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEI---VDRNTPVI 372



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 18/299 (6%)

Query: 252 NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
           +  +  +    P    +VS   S     H + + +   + +WG GE G+LGHG+   +  
Sbjct: 2   DAALSAVADEAPPAVVLVSAGAS-----HSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV 56

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDG-LLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           P +I  G     +T V  G  H+ A +ED   +Y+WG GD GRLGHG+     TP  V  
Sbjct: 57  PTVIS-GFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA 115

Query: 371 LSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           L    +  ++CG+SH L ++  G  + S G    G+LG   T     P+ I+A     V+
Sbjct: 116 LQGIKIKQLACGDSHCLAVTMAGEVL-SWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK 174

Query: 429 KVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
            + AG   + A+T DG ++ WG      LGL   +  F  P  V+ +   ++V V+ G  
Sbjct: 175 MIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRF-VPEKVSSVEGDKMVLVACGWR 233

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           H + +S    +Y +G +  GQ G  +F + +  P KV  L+D    QI  G   ++A T
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEALKDSSTSQISGGWRHTMALT 291



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 120/245 (48%), Gaps = 16/245 (6%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L           +Q+    +++ I AG   T  +   G   +YG 
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGD--IYGW 195

Query: 246 GW-----LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           GW     LGL +   + +P++V  +E   + L    C   H +TV+S G +Y++G  ++G
Sbjct: 196 GWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVA--CGWRHTITVSSSGSLYTYGWSKYG 253

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHG+      P  +   L     +Q+S G  H+ A+T DG LY WG    G++G GD 
Sbjct: 254 QLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDN 312

Query: 360 KSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
               +P  V   E   V  V+CG  HTL  ++    V++ G G  G+LGH +     TP 
Sbjct: 313 ADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEK-KNVFAWGRGTSGQLGHGEIVDRNTPV 371

Query: 418 VIEAL 422
           +I+AL
Sbjct: 372 IIDAL 376



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 9/157 (5%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
           +  G   T  + S+G L  YG    G LG  +     +P +V    A+   S S+ S   
Sbjct: 228 VACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVE---ALKDSSTSQISGGW 284

Query: 280 -HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + +TS+G++Y WG  + G++G G+      P  +      ++V QV+ G  H+ A T
Sbjct: 285 RHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEE-QKVAQVACGWRHTLAFT 343

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
           E   ++ WG G  G+LGHG++  R+TP ++  LS  G
Sbjct: 344 EKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDG 380


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 130/239 (54%), Gaps = 11/239 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C ++H L VT +GEV SWG  ++G+LG G T     P+ I     G  V  V+AG  H+A
Sbjct: 116 CGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQA-FQGVSVKMVAAGAEHTA 174

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT 393
           AVTEDG LY WG G +G LG GD   R  P  V+ +  V    V+CG  HT+ +S  G  
Sbjct: 175 AVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSG-G 233

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +++ G    G+LGH D     TP  +EAL++  + ++  G   ++ALT DG ++ WG   
Sbjct: 234 LYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNK 293

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              +G+   ++   +PV V      ++V +S G  H LA+++   V++WG  T GQ G 
Sbjct: 294 FGQVGV-GDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 351



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 22/226 (9%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           +RV  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L   +V +V+C
Sbjct: 16  RRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S+    V+S G              + TP+ I+AL   R++++  G S  +A
Sbjct: 76  GADHTTAYSESFTQVYSWGC------------DLFTPQPIKALHGLRIKQIACGDSHCLA 123

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T DG V  WG      LGL ++  S   P  +       +  V+ G  H  A+++  E+
Sbjct: 124 VTMDGEVQSWGRNQNGQLGLGTTEDSL-VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 182

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           Y WG    G  G  + ++ +  P KV  +E V + ++  G   +I+
Sbjct: 183 YGWGWGRYGNLGLGDRNDRL-VPEKVSTVEGVKMVKVACGWRHTIS 227



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 25/302 (8%)

Query: 181 TDISVAHSKVYTWGCNLHH-QILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           T  S + ++VY+WGC+L   Q +  + G             I+ I  G      +   G 
Sbjct: 81  TAYSESFTQVYSWGCDLFTPQPIKALHGL-----------RIKQIACGDSHCLAVTMDGE 129

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +  +G+   G LGL  T    +P+++      VS+ +      H   VT +GE+Y WG G
Sbjct: 130 VQSWGRNQNGQLGLGTTEDSLVPQKIQAFQG-VSVKMVAAGAEHTAAVTEDGELYGWGWG 188

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            +G LG G+   +  P+ +   + G ++ +V+ G  H+ +V+  G LYT+G   +G+LGH
Sbjct: 189 RYGNLGLGDRNDRLVPEKVS-TVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGH 247

Query: 357 GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           GD +   TP  +  L +  +  +S G  HT+ L+ DG  ++  G    G++G  D     
Sbjct: 248 GDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDG-KLYGWGWNKFGQVGVGDNVDHC 306

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGL 469
           +P  ++   + +V  +  G   ++A+T    VF WG G         SI  + P ++  L
Sbjct: 307 SPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 366

Query: 470 SS 471
           S+
Sbjct: 367 SA 368



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 25/261 (9%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGE 348
           V SWG GE G+LGHG+   +  P  +   L G  V  V+ G  H+ A +E    +Y+WG 
Sbjct: 37  VCSWGRGEDGQLGHGDAEDRLSPTYLS-ALDGHEVVSVTCGADHTTAYSESFTQVYSWGC 95

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
                    DL    TP  +  L    +  ++CG+SH L ++ DG  V S G    G+LG
Sbjct: 96  ---------DL---FTPQPIKALHGLRIKQIACGDSHCLAVTMDGE-VQSWGRNQNGQLG 142

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH----- 461
              T     P+ I+A +   V+ V AG   + A+T DG ++ WG G R  ++        
Sbjct: 143 LGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWG-RYGNLGLGDRNDR 201

Query: 462 -TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
             P  V+ +   ++V V+ G  H +++S    +Y +G +  GQ G  +F + +  P K+ 
Sbjct: 202 LVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLE 260

Query: 521 GLEDVCVRQICAGSLFSIAYT 541
            L++  + +I  G   ++A T
Sbjct: 261 ALQENLISEISGGWRHTMALT 281



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 11/196 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA--GQFCTFLLDSTGGLLVYG- 244
            ++Y WG   +  +    R     P   S    ++ ++   G   T  + S+GGL  YG 
Sbjct: 180 GELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGW 239

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGK 300
              G LG  +      P +  LEA   +L +S+ S    H + +TS+G++Y WG  + G+
Sbjct: 240 SKYGQLGHGDFEDHLTPHK--LEALQENL-ISEISGGWRHTMALTSDGKLYGWGWNKFGQ 296

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +G G+ +    P  +    + ++V  +S G  H+ AVTE   +++WG G +G+LGHG+  
Sbjct: 297 VGVGDNVDHCSPVQVKF-PHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESI 355

Query: 361 SRHTPTLVTELSDVGA 376
            R+ P ++  LS  G+
Sbjct: 356 DRNIPKMIEVLSADGS 371


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 21/282 (7%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           +Y  GW     LG  N++   +P+ +    A+  L + +  C ++H L VT EGEV SWG
Sbjct: 88  LYSWGWGDFGRLGHGNSSDLLIPQPI---IALQGLRIKQIACGDSHCLAVTMEGEVQSWG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG GNT     P+ I     G  +  V+AG  HS A+TE+G LY WG G +G L
Sbjct: 145 RNQNGQLGLGNTEDSLVPQKIQA-FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+  +   +  V+CG  HT+ +S  G  +++ G    G+LGH +   
Sbjct: 204 GLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSG-GIYTYGWSKYGQLGHGNFED 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P+ ++AL    + +V  G   S+ALT  GL+F WG      +G+   ++   +PV V
Sbjct: 263 SLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGV-GDNLDHCSPVQV 321

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                 ++V +S G  H +A+++   V++WG  T GQ G  +
Sbjct: 322 KFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGD 363



 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 9/191 (4%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG 380
           RV  +SAG SH+ A+    ++ +WG G+ G+LGHGD   R  PT ++ L    + +++CG
Sbjct: 15  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACG 74

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             HTL  S+  + ++S G G+ G+LGH ++  +  P+ I AL+  R++++  G S  +A+
Sbjct: 75  ADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAV 134

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T +G V  WG      LGL ++  S   P  +       I  V+ G  H +A+++  E+Y
Sbjct: 135 TMEGEVQSWGRNQNGQLGLGNTEDSL-VPQKIQAFKGVPIKMVAAGAEHSVAITENGELY 193

Query: 495 AWGSNTMGQCG 505
            WG    G  G
Sbjct: 194 GWGWGRYGNLG 204



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+     I+ + AG   +  +   G L  YG 
Sbjct: 138 GEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGEL--YGW 195

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   +  P++V        + +  C   H ++V+S G +Y++G  ++G+
Sbjct: 196 GWGRYGNLGLGDRNDRWNPEKVS-SVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQ 254

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHGN      P+ +   L  K ++QVS G  HS A+T  GLL+ WG    G++G GD  
Sbjct: 255 LGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNL 313

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              +P  V    D  V  +SCG  HT+ +++    V+S G G  G+LGH DT    +PK+
Sbjct: 314 DHCSPVQVKFPQDQRVVQISCGWRHTIAVTEK-ENVFSWGRGTNGQLGHGDTIDRNSPKI 372

Query: 419 IEAL 422
           IEAL
Sbjct: 373 IEAL 376



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 11/193 (5%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
           + ++Y WG   +  + L +   + +  ++ S+  + +  +  G   T  + S+GG+  YG
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYG 248

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHG 299
               G LG  N     +P+++    A+    +S+ S    H + +TS G ++ WG  + G
Sbjct: 249 WSKYGQLGHGNFEDSLVPQKL---QALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           ++G G+ L    P  +      +RV Q+S G  H+ AVTE   +++WG G +G+LGHGD 
Sbjct: 306 QVGVGDNLDHCSPVQVKF-PQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDT 364

Query: 360 KSRHTPTLVTELS 372
             R++P ++  LS
Sbjct: 365 IDRNSPKIIEALS 377


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 173/379 (45%), Gaps = 29/379 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSK 275
           ++  I  G     L    G +  +G+   G LG         PK V  L   +V L    
Sbjct: 257 DVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLI--S 314

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT+ G++++WG G +  G LG G  +S   PK + G L G +V  V+ G  H
Sbjct: 315 CGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWH 374

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL----VL 387
           SA  T  G LYT+G+G  G LGHGD ++   P  V  LS      V+CG  H+     V 
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVT 434

Query: 388 SQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           +Q G  V     ++ G G+  +LGH D      PK ++AL ++   ++  G + +VAL  
Sbjct: 435 NQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALAT 494

Query: 443 DGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G VF  G      L +       P LV   L+S  + ++S G SHV  L+  +EVY WG
Sbjct: 495 SGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWG 554

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
               G+ G  +  +   +P  V  L+D  V+ I  GS F+    +   +  +S A   +C
Sbjct: 555 MGANGRLGHGDLKDR-KKPCLVEALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVC 610

Query: 558 VDVRPHTFTLIREFLEQYS 576
              R   F   R+  + Y+
Sbjct: 611 TGCR-QAFGFTRKRHDCYN 628


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 153/324 (47%), Gaps = 25/324 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A  +  V  C E H   VT  G++Y+WG G H  G LGHGN +S   PK + G L   RV
Sbjct: 359 ASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRV 418

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGES 382
             ++ G  H+A VT  G L+T+G+G  G LGH D +S ++P  V  L  +  V  +CG  
Sbjct: 419 ASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVW 478

Query: 383 HTLVLSQ-----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           HT  + +               +++ G G+ G+LGH D  +   P  + AL     RKV 
Sbjct: 479 HTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVA 538

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +VALT  G VF  G      L         P +V G L    + D++ G  HV  
Sbjct: 539 CGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVAC 598

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           ++  +EVY WG    G+ G  +  +  + P+ V  L++  V+ I  G+ F+ A  +   +
Sbjct: 599 VTLKSEVYTWGKGANGRLGHGDQED-RNTPTLVEALKEKQVKSIACGATFTAAVCL---H 654

Query: 547 SALSSAFTPLCVDVR-PHTFTLIR 569
             LS A    C   R P +FT  R
Sbjct: 655 KWLSGADQNACSGCRQPFSFTRKR 678



 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 257 PLPKRVPLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           PLPK   LE+AIV  +    C   H   VT +GEV++WG    G+LGHG       P+L+
Sbjct: 298 PLPK--ALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLV 355

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---E 370
              L       V+ G  H  AVT  G LYTWG+G H  G LGHG+  S   P  V    E
Sbjct: 356 E-ALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLE 414

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V +++CG  HT V++  G  +++ G G  G LGH D     +P+ +E+L+  R  + 
Sbjct: 415 EVRVASIACGPWHTAVVTTAGQ-LFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRA 473

Query: 431 CAGTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +             P  V  L  H 
Sbjct: 474 ACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHN 533

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +AL+   EV+  GS+  GQ G       +  P  V G L D  V  I  
Sbjct: 534 FRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL--PGMVEGRLVDAYVEDIAC 591

Query: 533 GS 534
           G+
Sbjct: 592 GA 593


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  135 bits (340), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 151/284 (53%), Gaps = 23/284 (8%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYS 292
           + VY  GW     LG  N++    P+  P++A + SL + +  C ++H L VT +GEV S
Sbjct: 90  MEVYSWGWGDFGRLGHGNSSDLFTPQ--PIKA-LHSLKIRQIACGDSHCLAVTMDGEVQS 146

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G T     P+ I     G  +  V+AG  H+AAVTEDG LY WG G +G
Sbjct: 147 WGRNQNGQLGLGTTEDSLVPQKIQA-FQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYG 205

Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  V+ ++   +  V+CG  HT+ +S  G  +++ G    G+LGH D 
Sbjct: 206 NLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDF 264

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
               TP  +EALR   +  +  G   ++ALT DG ++ WG      +G+   +I   +PV
Sbjct: 265 EDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGV-GDNIDHCSPV 323

Query: 465 LVT--GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            V      +H +V +S G  H LA+++   V++WG  T GQ G 
Sbjct: 324 QVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGH 367



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           ++V  +SAG SHS A+    ++ +WG G+ G+LGHGD + R TPT ++ L   D+ +++C
Sbjct: 18  RQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITC 77

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S+    V+S G G+ G+LGH ++  + TP+ I+AL   ++R++  G S  +A
Sbjct: 78  GADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLA 137

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T DG V  WG      LGL ++  S   P  +       I  V+ G  H  A+++  E+
Sbjct: 138 VTMDGEVQSWGRNQNGQLGLGTTEDSL-VPQKIQAFQGVSIKMVAAGAEHTAAVTEDGEL 196

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 197 YGWGWGRYGNLG 208



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 13/272 (4%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H + + S   V SWG GE G+LGHG+   +  P  +   L G  +  ++ G  H+ + +
Sbjct: 28  SHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLS-TLDGLDIISITCGADHTTSYS 86

Query: 339 EDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
           E  + +Y+WG GD GRLGHG+     TP  +  L    +  ++CG+SH L ++ DG  V 
Sbjct: 87  ESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGE-VQ 145

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
           S G    G+LG   T     P+ I+A +   ++ V AG   + A+T DG ++ WG G R 
Sbjct: 146 SWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWG-RY 204

Query: 456 SSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            ++          P  V+ ++  +++ V+ G  H +++S    +Y +G +  GQ G  +F
Sbjct: 205 GNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDF 264

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            + +  P KV  L D  +  I  G   ++A T
Sbjct: 265 EDHL-TPHKVEALRDSYISMISGGWRHTMALT 295



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 16/246 (6%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+    +I+ + AG   T  +   G L  YG 
Sbjct: 142 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGEL--YGW 199

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P++V L      + V+ C   H ++V+S G +Y++G  ++G+
Sbjct: 200 GWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVA-CGWRHTISVSSSGGLYTYGWSKYGQ 258

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L    ++ +S G  H+ A+T DG LY WG    G++G GD  
Sbjct: 259 LGHGDFEDHLTPHKVEA-LRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNI 317

Query: 361 SRHTPTLVT----ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
              +P  V     +   +  +SCG  HTL +++    V+S G G  G+LGH ++     P
Sbjct: 318 DHCSPVQVKFPHEQAHSLVQISCGWRHTLAITER-QNVFSWGRGTNGQLGHGESMDRNLP 376

Query: 417 KVIEAL 422
           K+IE L
Sbjct: 377 KIIEVL 382



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 9/196 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHI--EAGQFCTFLLDSTGGLLVYG- 244
            ++Y WG   +  +    R     P   SL +  + I    G   T  + S+GGL  YG 
Sbjct: 194 GELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGW 253

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G LG  +      P +V  EA   S +S+      H + +TS+G +Y WG  + G++
Sbjct: 254 SKYGQLGHGDFEDHLTPHKV--EALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQV 311

Query: 302 GHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           G G+ +    P ++         + Q+S G  H+ A+TE   +++WG G +G+LGHG+  
Sbjct: 312 GVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESM 371

Query: 361 SRHTPTLVTELSDVGA 376
            R+ P ++  LS  G+
Sbjct: 372 DRNLPKIIEVLSADGS 387


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  135 bits (340), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 162/346 (46%), Gaps = 32/346 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG--LANTTIQPLPKRVPLEAAIVSLSVS 274
           ++ HI  G     L+   G +  +G+   G LG  +    IQP   R+    A  S+   
Sbjct: 281 DVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP---RLVESLAFTSVDFV 337

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            C E H   VT  GE+++WG G H  G LGHG  +S   PK I G L G +V  V+ G  
Sbjct: 338 ACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPW 397

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT-----L 385
           H+A VT    L+T+G+G  G LGHGD  +   P  V  LS +   AV+CG  HT     +
Sbjct: 398 HTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEV 457

Query: 386 VLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           +++Q   +V     ++ G G+  +LGH D      P  + AL ++  +KV  G S +V L
Sbjct: 458 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGL 517

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEV 493
           T  G V   G      LG   S      P  V   L    + +++ G  HV  L+  NEV
Sbjct: 518 TTSGQVCTMGSTVYGQLGNPQSDGKL--PCFVEDKLLGECVEEIACGAYHVAVLTSRNEV 575

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           Y WG    G+ G  +  +    P+ V  L+D  V+ I  GS ++ A
Sbjct: 576 YTWGKGANGRLGHGDIED-RKTPTLVETLKDRHVKYIACGSNYTAA 620



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 139/327 (42%), Gaps = 76/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +++TWG     ++   V     +PRL +SL  +++  +  G+F T  +   G L  +G
Sbjct: 298 QGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMAGELFTWG 357

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG        +PKR+  PLE   V+ SV+ C   H   VT+  +++++G G 
Sbjct: 358 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA-SVT-CGPWHTALVTTTRQLFTFGDGT 415

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  +   P+ +   L G R   V+ G  H+AAV E            G L+TW
Sbjct: 416 FGVLGHGDKDNVAYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTW 474

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT----------- 393
           G+GD  RLGHGD + R  PT V  L +     V+CG S T+ L+  G             
Sbjct: 475 GDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQL 534

Query: 394 ----------------------------------------VWSMGSGNLGKLGHEDTGKV 413
                                                   V++ G G  G+LGH D    
Sbjct: 535 GNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDR 594

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
            TP ++E L+   V+ +  G++++ A+
Sbjct: 595 KTPTLVETLKDRHVKYIACGSNYTAAI 621


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  135 bits (340), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 23/322 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK--LGHGNTLSQRRPKLIMGGLYGKRV 324
           AI +++   C E H   V+S G++++WG G HG   LGHG  +S   PK + G L G +V
Sbjct: 353 AITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQV 412

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGES 382
             V+ G  HSA  T +G L+T G+G  G LGHGD  S   P  V  LS   A  V+CG  
Sbjct: 413 VSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVW 472

Query: 383 HTLVL---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           H+  +         +     +++ G G+  +LGH +      P  + A+ ++   +V  G
Sbjct: 473 HSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACG 532

Query: 434 TSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            + +VALT  G VF  G      L + +     P+LV G L    + ++S G +HV  L+
Sbjct: 533 YTMTVALTTSGHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLT 592

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             +E+Y WG    G+ G  + ++    P+ V  L+D  ++ I  GS F+    +   +  
Sbjct: 593 SRSELYTWGRGANGRLGHGD-TDDQKSPTMVEALKDRHIKNISCGSTFTSCICL---HKW 648

Query: 549 LSSAFTPLCVDVR-PHTFTLIR 569
           +S     +C D R P  FT  R
Sbjct: 649 VSGVDQSVCSDCRQPFGFTRKR 670



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 167/363 (46%), Gaps = 38/363 (10%)

Query: 176 YNIGDTDISVA----HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQF 229
           + IG  D  +A      +V+TWG +   ++         RP L +SL  +N+  +  G++
Sbjct: 306 HQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEY 365

Query: 230 CTFLLDSTGGLLVYGK-----GWLGLANTTIQPLPKRV--PLEA-AIVSLSVSKCSEAHV 281
            +  + S+G L  +G      G LG        +PKRV  PLE   +VS++   C   H 
Sbjct: 366 HSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVA---CGTWHS 422

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-- 339
              TS G++++ G G  G LGHG+  S   PK +   L G +  +V+ G  HSAA+ E  
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQ-LLSGHKAIKVACGVWHSAAIIEVM 481

Query: 340 --------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQ 389
                      L+TWG+GD  RLGH + ++   PT V  +++     V+CG + T+ L+ 
Sbjct: 482 GPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTT 541

Query: 390 DGHTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            GH V++MG    G+LG+ ++ GKV      + + +F V ++  G +    LT    ++ 
Sbjct: 542 SGH-VFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEF-VEEISCGANHVAVLTSRSELYT 599

Query: 449 WGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           WG G         +    +P +V  L    I ++S G +    +  +  V     +    
Sbjct: 600 WGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGSTFTSCICLHKWVSGVDQSVCSD 659

Query: 504 CGQ 506
           C Q
Sbjct: 660 CRQ 662



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 116/284 (40%), Gaps = 26/284 (9%)

Query: 284 VTSEGEVYSWG---VGEHGKLGHGNTLSQRRPKLIMGGLYGK---RVTQVSAGHSHSAAV 337
           + S G+VY WG   V  +   G G+  S +   L    L       V Q+  G  H A V
Sbjct: 259 IESLGDVYIWGEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALV 318

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-V 394
           T  G ++TWGE   GRLGHG  K    P LV  L+  +V  V+CGE H+  +S  G    
Sbjct: 319 TRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSSSGDLFT 378

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           W  G+   G LGH        PK +   L   +V  V  GT  S   T +G +F  G G 
Sbjct: 379 WGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSALATSNGKLFTIGDGR 438

Query: 454 -----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL----------SQYNEVYAWGS 498
                     S   P  V  LS H+ + V+ G  H  A+          +    ++ WG 
Sbjct: 439 FGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGD 498

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               + G  N    + +P+ V  + +    Q+  G   ++A T 
Sbjct: 499 GDQYRLGHVNKETYL-EPTCVAAVAEYNFHQVACGYTMTVALTT 541


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 140/264 (53%), Gaps = 15/264 (5%)

Query: 290 VYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           VY WG   HG+LG G    ++   P+  M   +   V Q + G SH+  +T+DG L++ G
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPRE-MDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG 61

Query: 348 EGDHGRLGHG-DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
             DHG+LGH  D      P  ++ L +  V  VSCG +H+L L+  G  V+S GS ++G+
Sbjct: 62  NNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQ-VFSWGSNSIGQ 120

Query: 405 LGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           LGH+ D    TTP++I+ +    V ++ +G   S+ALT  G +F WG      LGL ++ 
Sbjct: 121 LGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTG 180

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               TP LV  L+   I  ++ G +H  A+S+   ++ WG NT GQ G ++  +    P 
Sbjct: 181 EKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRC-FPQ 239

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
           ++  L ++ VR I  G  FS   T
Sbjct: 240 QLKTLRNLGVRYISCGDDFSAFLT 263



 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 15/282 (5%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVS 328
           S+  + C  +H L +T +G+++S G  +HG+LGH  + L  +RP+ I   L    VT VS
Sbjct: 37  SVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQFI-SSLENYIVTHVS 95

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSD--VGAVSCGESHTL 385
            G +HS A+T  G +++WG    G+LGH  DL++  TP ++  ++   V  ++ G+ H+L
Sbjct: 96  CGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSL 155

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            L+  G  ++S G+   G+LG   TG KV TP ++++L    +  +  G + S A++  G
Sbjct: 156 ALTNSGE-LFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSG 214

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            +F WG      LGL +  +S   P  +  L +  +  +S GD     L+Q   V+  G+
Sbjct: 215 AIFGWGKNTFGQLGL-NDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGA 273

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
            T GQ G    SN +  P  V  L    + QI  G   ++A+
Sbjct: 274 GTFGQLGHGTCSNEI-LPRMVFELMGSKITQIACGRRHTLAF 314



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 15/263 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKC---SRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVY 243
           K+++ G N H Q+  +    C    RP+  S   N  + H+  G   +  L + G +  +
Sbjct: 56  KLFSCGNNDHGQLGHDT--DCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSW 113

Query: 244 GKGWLGLA--NTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G    +T +Q    P+ +   A    + ++   + H L +T+ GE++SWG   +G
Sbjct: 114 GSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIAS-GQFHSLALTNSGELFSWGANGYG 172

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG G T  +     ++  L G  +  ++ G +HS AV++ G ++ WG+   G+LG  DL
Sbjct: 173 QLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232

Query: 360 KSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
            SR  P  +  L ++G   +SCG+  +  L+Q+G  V++ G+G  G+LGH        P+
Sbjct: 233 VSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEG-GVFTCGAGTFGQLGHGTCSNEILPR 291

Query: 418 VIEALRKFRVRKVCAGTSFSVAL 440
           ++  L   ++ ++  G   ++A 
Sbjct: 292 MVFELMGSKITQIACGRRHTLAF 314


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 19/278 (6%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N++    PK  P++A +  L + +  C ++H L VT EGEV SWG
Sbjct: 82  VYSWGWGDFGRLGHGNSSDLLTPK--PIKA-LHGLKIRQIACGDSHCLAVTMEGEVQSWG 138

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ I     G  +  V+AG  H+AAVTEDG L+ WG G +G L
Sbjct: 139 RNQNGQLGLGTTEDSLVPQKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNL 197

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+ +    +  V+CG  HT+ +S  G  +++ G    G+LGH D   
Sbjct: 198 GLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLG-GLYTYGWSKYGQLGHGDFED 256

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVT 467
              P  +EALR   + ++  G   ++ALT DG ++ WG           +I   +P+ + 
Sbjct: 257 RLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIK 316

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                +++ +S G  H LA++    V++WG  T GQ G
Sbjct: 317 FPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLG 354



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 134/276 (48%), Gaps = 19/276 (6%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH----S 334
           +H + + S   V SWG GE G+LGHG+   +  P  +   L G  +  V+ G  H    S
Sbjct: 18  SHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLS-ALDGHEIVSVTCGADHTTAYS 76

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGH 392
            A TE   +Y+WG GD GRLGHG+     TP  +  L    +  ++CG+SH L ++ +G 
Sbjct: 77  VARTE---VYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGE 133

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V S G    G+LG   T     P+ I+A     ++ V AG   + A+T DG +F WG G
Sbjct: 134 -VQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWG 192

Query: 453 LRSSSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            R  ++          P  V+ +   ++V V+ G  H +++S    +Y +G +  GQ G 
Sbjct: 193 -RYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGH 251

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +F + +  P ++  L    + QI  G   ++A T 
Sbjct: 252 GDFEDRL-VPHRLEALRGDNISQISGGWRHTMALTT 286



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           +RV  +SAG SHS A+    ++ +WG G+ G+LGHGD + R +PT ++ L   ++ +V+C
Sbjct: 8   RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S     V+S G G+ G+LGH ++  + TPK I+AL   ++R++  G S  +A
Sbjct: 68  GADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLA 127

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL ++  S   P  +       I  V+ G  H  A+++  E+
Sbjct: 128 VTMEGEVQSWGRNQNGQLGLGTTEDSL-VPQKIQAFEGISIKMVAAGAEHTAAVTEDGEL 186

Query: 494 YAWGSNTMGQCG 505
           + WG    G  G
Sbjct: 187 FGWGWGRYGNLG 198



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 125/244 (51%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+    +I+ + AG   T  +   G L  +G 
Sbjct: 132 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGEL--FGW 189

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P++V        + V+ C   H ++V+S G +Y++G  ++G+
Sbjct: 190 GWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVA-CGWRHTISVSSLGGLYTYGWSKYGQ 248

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+   +  P  +   L G  ++Q+S G  H+ A+T DG LY WG    G++G GD  
Sbjct: 249 LGHGDFEDRLVPHRLEA-LRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 307

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              +P  +    D  V  +SCG  HTL ++ D   V+S G G  G+LGH ++    TP +
Sbjct: 308 DHCSPIQIKFPQDQKVIQISCGWRHTLAVT-DKQNVFSWGRGTNGQLGHGESVDRNTPMI 366

Query: 419 IEAL 422
           +EAL
Sbjct: 367 LEAL 370



 Score = 70.5 bits (171), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 9/154 (5%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
           +  G   T  + S GGL  YG    G LG  +   + +P R+    A+   ++S+ S   
Sbjct: 222 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLE---ALRGDNISQISGGW 278

Query: 280 -HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + +T++G++Y WG  + G++G G+ +    P  I      ++V Q+S G  H+ AVT
Sbjct: 279 RHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKF-PQDQKVIQISCGWRHTLAVT 337

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           +   +++WG G +G+LGHG+   R+TP ++  LS
Sbjct: 338 DKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 371


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 136/253 (53%), Gaps = 14/253 (5%)

Query: 261  RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS--QRRPKLIMGG 318
            R+P+   + + +V  C + H   + + G+VY+WG    G+LG G+ +S   R P L +  
Sbjct: 764  RLPVGLLLPTQNVLACGQDHA-AIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVET 822

Query: 319  L--YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG- 375
            L  +G  V  V+ G  H+ AVT++G LY+WG   +G+LG GD      P  V  LS    
Sbjct: 823  LHMHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRC 882

Query: 376  -AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             +V+CG+ HTLVL+QD   +WS G G  G+LGH D      PK++  L K  +  + AG 
Sbjct: 883  LSVACGQLHTLVLTQD-QRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGY 941

Query: 435  SFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIG-DSHVLALS 488
            + S ALT DG V+ +G      L + SI   T PV +  LSSH +  ++ G  S++   S
Sbjct: 942  AHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITS 1001

Query: 489  QYNEVYAWGSNTM 501
               +VY WG + +
Sbjct: 1002 NPQKVYTWGKSPL 1014



 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 161/350 (46%), Gaps = 51/350 (14%)

Query: 236  STGGLLVYGKGWLG-LANTTIQPLPKRVP------LEAAIVSLSVSKCSEAHVLTVTSEG 288
            + G +  +G+   G L    I  L  R P      L    + +    C + H + VT EG
Sbjct: 788  ANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVACGKEHTMAVTQEG 847

Query: 289  EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            ++YSWG   +G+LG G+     RP + +  L G+R   V+ G  H+  +T+D  L+++G 
Sbjct: 848  KLYSWGSSSYGQLGVGDRNVHSRP-VAVEALSGQRCLSVACGQLHTLVLTQDQRLWSFGW 906

Query: 349  GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            G HG+LGHGD++ +  P LV +LS      +S G +H+  L+ DG  VW  GS + G+LG
Sbjct: 907  GVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGALTNDGQ-VWMFGSSSFGQLG 965

Query: 407  HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWG---LGLRSS------ 456
                GK T P  ++AL    V  +  G   ++A+T +   V+ WG   L LR +      
Sbjct: 966  TGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAITSNPQKVYTWGKSPLELRQALQLARK 1025

Query: 457  ---SISFHTP----VLVTGLSS------------------HQIVDVSIGDSHVLALSQYN 491
               S  +  P      VT L S                    I  +++  +H L L+   
Sbjct: 1026 RHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVG 1085

Query: 492  EVYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIA 539
            ++Y+WGSN  GQ G     N V Q  P  +    D     + AGS FS+A
Sbjct: 1086 DLYSWGSNEAGQLG---MGNRVSQSVPVLINRSRDDQFVAVAAGSRFSLA 1132



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 327  VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS---RHTPTLVTELS----DVGAVSC 379
            ++ G  H AA+  +G +YTWG    GRLG GD+ S   R  P  V  L      V AV+C
Sbjct: 777  LACGQDH-AAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVAC 835

Query: 380  GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            G+ HT+ ++Q+G  ++S GS + G+LG  D    + P  +EAL   R   V  G   ++ 
Sbjct: 836  GKEHTMAVTQEG-KLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLV 894

Query: 440  LTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
            LT D  ++ +G G+              P LV  LS   IV +S G +H  AL+   +V+
Sbjct: 895  LTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVW 954

Query: 495  AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP 544
             +GS++ GQ G  +       P ++  L    V  +  G   +IA T  P
Sbjct: 955  MFGSSSFGQLGTGSIGKST-VPVRLKALSSHHVSILTCGYYSNIAITSNP 1003



 Score = 45.8 bits (107), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 258  LPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
            LP  VP  ++A I  +++S     H L +T+ G++YSWG  E G+LG GN +SQ  P LI
Sbjct: 1056 LPSLVPTNIQAPIKKMTMSG---NHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLI 1112

Query: 316  MGGLYGKRVTQVSAGHSHSAAV 337
                  + V  V+AG   S AV
Sbjct: 1113 NRSRDDQFVA-VAAGSRFSLAV 1133


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  135 bits (339), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           +R +  G   +  L + G +   G    G LG   T  +  P+ VP  +  V+++     
Sbjct: 125 VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGG-- 182

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            +H L + ++G V++WG   +G+LG+G+T + R   + + GL G  V  V+ G+ HS A+
Sbjct: 183 -SHALALCADGTVWAWGNNGYGQLGNGST-AHRATPVQVPGLQG--VVAVAGGYMHSLAL 238

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
             DG ++ WG  D+G+LG+G      TP  V  LS V +V+ G  H+L L  DG TVW+ 
Sbjct: 239 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADG-TVWAW 297

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G+   G+LG   + + T P  +E LR+  V  V  G   S+A+   G ++ WG      L
Sbjct: 298 GNNGFGQLGEAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQL 355

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  S S S   P  V GL +  +  V+ G  H +A+     V+AWG N  GQ G +    
Sbjct: 356 GNGSFSSSAR-PAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPE 412

Query: 512 PVDQPSKVVGLE 523
               P +V GL+
Sbjct: 413 RA-TPVRVPGLQ 423



 Score =  132 bits (332), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 92/265 (34%), Positives = 139/265 (52%), Gaps = 16/265 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           + L + ++G V++ G    G+LG+G T ++  P+ + G     R   V+AG SH+ A+  
Sbjct: 134 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGL---SRAVAVAAGGSHALALCA 190

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   +G+LG+G    R TP  V  L  V AV+ G  H+L L  DG TVW+ G 
Sbjct: 191 DGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGVVAVAGGYMHSLALCADG-TVWAWGF 249

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW---GLGLRSS 456
            + G+LG+  T    TP  +  L +  V  V AG   S+AL  DG V+ W   G G    
Sbjct: 250 NDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWAWGNNGFGQLGE 307

Query: 457 SISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           ++S     P  V GL   ++V V+ G  H LA+     +++WG+N  GQ G  +FS+   
Sbjct: 308 AVSTQRTKPGRVEGL--REVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSA- 364

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIA 539
           +P+ V GL    V  + AG + S+A
Sbjct: 365 RPAPVQGLG--AVTSVAAGGMHSVA 387



 Score =  121 bits (303), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 23/330 (6%)

Query: 187 HSKVYTWGC--NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           H+    W C  N   Q+ +      S PR     S    + AG      L + G +  +G
Sbjct: 139 HADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGGSHALALCADGTVWAWG 198

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG  +T  +  P +VP    +V+++       H L + ++G V++WG  ++G+L
Sbjct: 199 NNGYGQLGNGSTAHRATPVQVPGLQGVVAVA---GGYMHSLALCADGTVWAWGFNDYGQL 255

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G+G T+    P  + G     +V  V+AG  HS A+  DG ++ WG    G+LG      
Sbjct: 256 GNGTTVHSPTPVPVPG---LSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 312

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R  P  V  L +V AV+ G  H+L + + G ++WS G+   G+LG+        P  ++ 
Sbjct: 313 RTKPGRVEGLREVVAVAGGFYHSLAV-RAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG 371

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  V AG   SVA+  DG V+ WG      LG    +    TPV V GL     V
Sbjct: 372 LGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLG-HERAPERATPVRVPGLQGE--V 426

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            V+ G  H L++     ++AWG N  GQ G
Sbjct: 427 AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 456



 Score =  115 bits (289), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 90/250 (36%), Positives = 122/250 (48%), Gaps = 26/250 (10%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V  V+ G+ +S A+  DG ++  G    G+LG+G   +R  P  V  LS   AV+ G SH
Sbjct: 125 VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGGSH 184

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            L L  DG TVW+ G+   G+LG+  T    TP  +  L+   V  V  G   S+AL  D
Sbjct: 185 ALALCADG-TVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYMHSLALCAD 241

Query: 444 GLVFWWGL---GLRSSSISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G V+ WG    G   +  + H  TPV V GLS  Q+V V+ G  H LAL     V+AWG+
Sbjct: 242 GTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCADGTVWAWGN 299

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDV-----------CVRQICAGSLFSIA--YTVPPS 545
           N  GQ G+   S    +P +V GL +V            VR    GSL+S    Y+    
Sbjct: 300 NGFGQLGE-AVSTQRTKPGRVEGLREVVAVAGGFYHSLAVR--AGGSLWSWGNNYSGQLG 356

Query: 546 NSALSSAFTP 555
           N + SS+  P
Sbjct: 357 NGSFSSSARP 366



 Score =  101 bits (251), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 10/245 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+ WG N + Q+ +        P      S +  + AG F +  L + G +  +G 
Sbjct: 240 ADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGN 299

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG A +T +  P RV     +V+++       H L V + G ++SWG    G+LG
Sbjct: 300 NGFGQLGEAVSTQRTKPGRVEGLREVVAVA---GGFYHSLAVRAGGSLWSWGNNYSGQLG 356

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           +G+  S  RP  + G   G  VT V+AG  HS AV  DG ++ WG  + G+LGH     R
Sbjct: 357 NGSFSSSARPAPVQG--LGA-VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPER 413

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            TP  V  L    AV+ G  H+L + Q G ++W+ G  + G+LG  +   +  P    A 
Sbjct: 414 ATPVRVPGLQGEVAVAAGFYHSLSV-QAGGSLWAWGLNDFGQLGDSEAPLMPVPAPGWAQ 472

Query: 423 RKFRV 427
            K RV
Sbjct: 473 GKARV 477



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 17/187 (9%)

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           K R TP    +   V AV+ G  ++L L  DG TVW+ GS + G+LG+  T   + P+ +
Sbjct: 111 KHRATPAQAADQRGVRAVAGGYQYSLALHADG-TVWACGSNSAGQLGNGTTAARSAPRPV 169

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
             L   R   V AG S ++AL  DG V+ WG      LG   S+    TPV V GL    
Sbjct: 170 PGLS--RAVAVAAGGSHALALCADGTVWAWGNNGYGQLG-NGSTAHRATPVQVPGLQG-- 224

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICA 532
           +V V+ G  H LAL     V+AWG N  GQ G      +P   P  V GL  V    + A
Sbjct: 225 VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPT--PVPVPGLSQVV--SVAA 280

Query: 533 GSLFSIA 539
           G   S+A
Sbjct: 281 GGFHSLA 287


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  135 bits (339), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           +R +  G   +  L + G +   G    G LG   T  +  P+ VP  +  V+++     
Sbjct: 122 VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGG-- 179

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
            +H L + ++G V++WG   +G+LG+G+T + R   + + GL G  V  V+ G+ HS A+
Sbjct: 180 -SHALALCADGTVWAWGNNGYGQLGNGST-AHRATPVQVPGLQG--VVAVAGGYMHSLAL 235

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
             DG ++ WG  D+G+LG+G      TP  V  LS V +V+ G  H+L L  DG TVW+ 
Sbjct: 236 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADG-TVWAW 294

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G+   G+LG   + + T P  +E LR+  V  V  G   S+A+   G ++ WG      L
Sbjct: 295 GNNGFGQLGEAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQL 352

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  S S S   P  V GL +  +  V+ G  H +A+     V+AWG N  GQ G +    
Sbjct: 353 GNGSFSSSAR-PAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPE 409

Query: 512 PVDQPSKVVGLE 523
               P +V GL+
Sbjct: 410 RA-TPVRVPGLQ 420



 Score =  132 bits (332), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 92/265 (34%), Positives = 139/265 (52%), Gaps = 16/265 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           + L + ++G V++ G    G+LG+G T ++  P+ + G     R   V+AG SH+ A+  
Sbjct: 131 YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGL---SRAVAVAAGGSHALALCA 187

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   +G+LG+G    R TP  V  L  V AV+ G  H+L L  DG TVW+ G 
Sbjct: 188 DGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQGVVAVAGGYMHSLALCADG-TVWAWGF 246

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW---GLGLRSS 456
            + G+LG+  T    TP  +  L +  V  V AG   S+AL  DG V+ W   G G    
Sbjct: 247 NDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWAWGNNGFGQLGE 304

Query: 457 SISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           ++S     P  V GL   ++V V+ G  H LA+     +++WG+N  GQ G  +FS+   
Sbjct: 305 AVSTQRTKPGRVEGL--REVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSA- 361

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIA 539
           +P+ V GL    V  + AG + S+A
Sbjct: 362 RPAPVQGLG--AVTSVAAGGMHSVA 384



 Score =  121 bits (303), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 23/330 (6%)

Query: 187 HSKVYTWGC--NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           H+    W C  N   Q+ +      S PR     S    + AG      L + G +  +G
Sbjct: 136 HADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGGSHALALCADGTVWAWG 195

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG  +T  +  P +VP    +V+++       H L + ++G V++WG  ++G+L
Sbjct: 196 NNGYGQLGNGSTAHRATPVQVPGLQGVVAVA---GGYMHSLALCADGTVWAWGFNDYGQL 252

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G+G T+    P  + G     +V  V+AG  HS A+  DG ++ WG    G+LG      
Sbjct: 253 GNGTTVHSPTPVPVPG---LSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 309

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R  P  V  L +V AV+ G  H+L + + G ++WS G+   G+LG+        P  ++ 
Sbjct: 310 RTKPGRVEGLREVVAVAGGFYHSLAV-RAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG 368

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  V AG   SVA+  DG V+ WG      LG    +    TPV V GL     V
Sbjct: 369 LGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLG-HERAPERATPVRVPGLQGE--V 423

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            V+ G  H L++     ++AWG N  GQ G
Sbjct: 424 AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 453



 Score =  115 bits (289), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 90/250 (36%), Positives = 122/250 (48%), Gaps = 26/250 (10%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V  V+ G+ +S A+  DG ++  G    G+LG+G   +R  P  V  LS   AV+ G SH
Sbjct: 122 VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGGSH 181

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            L L  DG TVW+ G+   G+LG+  T    TP  +  L+   V  V  G   S+AL  D
Sbjct: 182 ALALCADG-TVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYMHSLALCAD 238

Query: 444 GLVFWWGL---GLRSSSISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G V+ WG    G   +  + H  TPV V GLS  Q+V V+ G  H LAL     V+AWG+
Sbjct: 239 GTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLS--QVVSVAAGGFHSLALCADGTVWAWGN 296

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDV-----------CVRQICAGSLFSIA--YTVPPS 545
           N  GQ G+   S    +P +V GL +V            VR    GSL+S    Y+    
Sbjct: 297 NGFGQLGE-AVSTQRTKPGRVEGLREVVAVAGGFYHSLAVR--AGGSLWSWGNNYSGQLG 353

Query: 546 NSALSSAFTP 555
           N + SS+  P
Sbjct: 354 NGSFSSSARP 363



 Score =  101 bits (251), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 10/245 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+ WG N + Q+ +        P      S +  + AG F +  L + G +  +G 
Sbjct: 237 ADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGN 296

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG A +T +  P RV     +V+++       H L V + G ++SWG    G+LG
Sbjct: 297 NGFGQLGEAVSTQRTKPGRVEGLREVVAVA---GGFYHSLAVRAGGSLWSWGNNYSGQLG 353

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           +G+  S  RP  + G   G  VT V+AG  HS AV  DG ++ WG  + G+LGH     R
Sbjct: 354 NGSFSSSARPAPVQG--LGA-VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPER 410

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            TP  V  L    AV+ G  H+L + Q G ++W+ G  + G+LG  +   +  P    A 
Sbjct: 411 ATPVRVPGLQGEVAVAAGFYHSLSV-QAGGSLWAWGLNDFGQLGDSEAPLMPVPAPGWAQ 469

Query: 423 RKFRV 427
            K RV
Sbjct: 470 GKARV 474



 Score = 84.3 bits (207), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 17/187 (9%)

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           K R TP    +   V AV+ G  ++L L  DG TVW+ GS + G+LG+  T   + P+ +
Sbjct: 108 KHRATPAQAADQRGVRAVAGGYQYSLALHADG-TVWACGSNSAGQLGNGTTAARSAPRPV 166

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
             L   R   V AG S ++AL  DG V+ WG      LG   S+    TPV V GL    
Sbjct: 167 PGLS--RAVAVAAGGSHALALCADGTVWAWGNNGYGQLG-NGSTAHRATPVQVPGLQG-- 221

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICA 532
           +V V+ G  H LAL     V+AWG N  GQ G      +P   P  V GL  V    + A
Sbjct: 222 VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPT--PVPVPGLSQVV--SVAA 277

Query: 533 GSLFSIA 539
           G   S+A
Sbjct: 278 GGFHSLA 284


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 137/278 (49%), Gaps = 19/278 (6%)

Query: 242 VYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N++    P P R      I  ++   C ++H L VT  GEV SWG
Sbjct: 95  VYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA---CGDSHCLAVTMGGEVQSWG 151

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ I     G  V  ++AG  H+AAVTEDG LY WG G +G L
Sbjct: 152 RNQNGQLGLGTTEDSLLPQKIQ-AFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNL 210

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+  E   +  ++CG  HT+ +S  G  +++ G    G+LGH D   
Sbjct: 211 GLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSG-ILYTYGWSKYGQLGHGDFED 269

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVT 467
              P  +EAL+     ++  G   ++ALT DG ++ WG           S+   +PV V 
Sbjct: 270 HLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVM 329

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             +  ++  V+ G  H LA ++   V+AWG  T GQ G
Sbjct: 330 FPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLG 367



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 14/265 (5%)

Query: 287 EGEVY-SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLY 344
           EG V  SWG GE G+LGHG+   +  P +I G     R+T V  G  H+ A +E+   +Y
Sbjct: 38  EGNVLCSWGRGEDGQLGHGDAEDRLVPTVISG-FDAPRITSVICGADHTTAYSEEEQQVY 96

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           +WG GD GRLGHG+     TP  V  L    +  ++CG+SH L ++  G  V S G    
Sbjct: 97  SWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGE-VQSWGRNQN 155

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G+LG   T     P+ I+A     V+ + AG   + A+T DG ++ WG      LGL   
Sbjct: 156 GQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR 215

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           +  F  P  V+ +   ++V ++ G  H + +S    +Y +G +  GQ G  +F + +  P
Sbjct: 216 NDRF-VPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL-FP 273

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
            KV  L+D    QI  G   ++A T
Sbjct: 274 HKVEALKDSSTSQISGGWRHTMALT 298



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 9/190 (4%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGE 381
           V  VSAG SHS A+ E  +L +WG G+ G+LGHGD + R  PT+++  +   + +V CG 
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGA 82

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            HT   S++   V+S G G+ G+LGH ++  V TP+ + AL+  +++++  G S  +A+T
Sbjct: 83  DHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVT 142

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
             G V  WG      LGL ++  S   P  +       +  ++ G  H  A+++  ++Y 
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSL-LPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYG 201

Query: 496 WGSNTMGQCG 505
           WG    G  G
Sbjct: 202 WGWGRYGNLG 211



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+     ++ I AG   T  +   G L  YG 
Sbjct: 145 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDL--YGW 202

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P++V L      + ++ C   H +TV+S G +Y++G  ++G+
Sbjct: 203 GWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIA-CGWRHTITVSSSGILYTYGWSKYGQ 261

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L     +Q+S G  H+ A+T DG LY WG    G++G GD  
Sbjct: 262 LGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSV 320

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              +P  V   ++  V  V+CG  HTL  ++    V++ G G  G+LGH +      P +
Sbjct: 321 DHCSPVQVMFPAEQKVAQVACGWRHTLAYTEK-KNVFAWGRGTSGQLGHGEIVDRNKPLM 379

Query: 419 IEAL 422
           I+A+
Sbjct: 380 IDAI 383



 Score = 70.5 bits (171), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 9/160 (5%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
           I  G   T  + S+G L  YG    G LG  +      P +V    A+   S S+ S   
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVE---ALKDSSTSQISGGW 291

Query: 280 -HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + +TS+G++Y WG  + G++G G+++    P  +M     ++V QV+ G  H+ A T
Sbjct: 292 RHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAE-QKVAQVACGWRHTLAYT 350

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS 378
           E   ++ WG G  G+LGHG++  R+ P ++  +S  G+ S
Sbjct: 351 EKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGSGS 390


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 155/335 (46%), Gaps = 29/335 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E H   VT  G++Y+WG G+ G LGHGN +S   PK +   L G  V+ ++ G  H+A
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 426

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ---- 389
            VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +    
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 486

Query: 390 -------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                      +++ G G+ G+LGH +      P  + AL +    +V  G S +VALT 
Sbjct: 487 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 546

Query: 443 DGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G      L +S     TP  V G L    + +++ G  HV  L+   EVY WG
Sbjct: 547 SGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 606

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             + G+ G  +  +  + P+ V  L+D  V+ I  G+ F+ A  +    S +  +    C
Sbjct: 607 KGSNGRLGHGDVDD-RNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGC 665

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVT 592
              +P +F   R        C+  G  + FC   T
Sbjct: 666 --RQPFSFKRKRH------NCYNCG--LVFCHSCT 690



 Score =  125 bits (314), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 154/332 (46%), Gaps = 30/332 (9%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           ++WG     ++   V     +P+L      +NI  +  G+F +  +  +G L  +GKG  
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF 389

Query: 249 GL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+    N     +PKRV      + +S   C   H   VTS G+++++G G  G LGHG+
Sbjct: 390 GVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 449

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGEGDHGR 353
             S   P+ +   L G R  + + G  H+AAV E             G L+TWG+GD GR
Sbjct: 450 KKSVFIPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LGHG+ + +  PT V  L   +   V+CG S T+ L+  GH V++MGS   G+LG+    
Sbjct: 509 LGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYGQLGNSHAD 567

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSI-SFHTPVLV 466
             T  +V   L K  V ++  G      LT    V+ WG G    L    +   ++P LV
Sbjct: 568 GKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLV 627

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
             L   Q+  ++ G +   A+     ++ W S
Sbjct: 628 ESLKDKQVKSIACGTNFTAAVC----IHRWAS 655



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 139/300 (46%), Gaps = 30/300 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+ IV L V    C   H + VT +GE +SWG    G+LGHG   + ++PKLI
Sbjct: 298 LPK--ALESTIV-LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLI 354

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-- 373
              L    +  V+ G  HS AVT  G LYTWG+GD G LGHG+  S   P  V  L +  
Sbjct: 355 -DALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGI 413

Query: 374 -VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            V +++CG  HT V++  G  +++ G G  G LGH D   V  P+ +++L+  R  +   
Sbjct: 414 HVSSIACGPYHTAVVTSAGQ-LFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAAC 472

Query: 433 GTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIV 475
           G   + A+               G +F WG G +      +      P  V  L      
Sbjct: 473 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC 532

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGS 534
            V+ G S  +AL+    VY  GS   GQ G  +       P++V G L    V +I  G+
Sbjct: 533 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT--PNRVEGKLHKSFVEEIACGA 590


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 144/294 (48%), Gaps = 21/294 (7%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           +++ +  C E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ 
Sbjct: 401 MNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSS 460

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHT 384
           +S G  H+A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT
Sbjct: 461 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHT 520

Query: 385 LVLSQ-----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             + +               +++ G G+ G+LGH D G    P  + AL +    +V  G
Sbjct: 521 AAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACG 580

Query: 434 TSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
              +VALT  G V+  G      L ++      PV V G L  + + ++S G  HV  L+
Sbjct: 581 HCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLT 640

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              EVY WG    G+ G  + ++  + P+ V  L+D  VR +  G  F+ A  +
Sbjct: 641 SKTEVYTWGKGANGRLGHGD-TDDKNTPTLVEALKDKQVRIVVCGINFTAAICI 693



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 157/348 (45%), Gaps = 32/348 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             ++Y+WG     ++   V    S+P+L    S  NI  +  G++ T  +  +G L  +G
Sbjct: 367 QGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWG 426

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PK V  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 427 DGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVS-SIS-CGPWHTAVVTSAGQLFTFGDGS 484

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G ++T
Sbjct: 485 FGVLGHGDRESISVPREVE-SLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFT 543

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD   +  PT V  L   +   V+CG   T+ L+  GH V++MGS   G
Sbjct: 544 WGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGH-VYTMGSAVYG 602

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           +LG+     +   +V   L K  V ++  G      LT    V+ WG G         + 
Sbjct: 603 QLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTD 662

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             +TP LV  L   Q+  V  G +   A+  +  V     +    C Q
Sbjct: 663 DKNTPTLVEALKDKQVRIVVCGINFTAAICIHKWVSGVDQSMCSGCRQ 710



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 24/241 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V  +S G  H+A VT+ G +Y+WGE   GRLGHG       P L+  LS  ++  V+CGE
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGE 410

Query: 382 SHT--LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSV 438
            HT  + LS D +T W  G+   G LGH +      PK +   L    V  +  G   + 
Sbjct: 411 YHTCAVTLSGDLYT-WGDGTFKFGLLGHGNDISHWVPKHVNGPLEGIHVSSISCGPWHTA 469

Query: 439 ALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ---- 489
            +T  G +F +G G           S   P  V  L   + V  + G  H  A+ +    
Sbjct: 470 VVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAG 529

Query: 490 --------YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                     +++ WG    G+ G  +   P   P+ V  L +    Q+  G   ++A T
Sbjct: 530 NSSSSNCSSGKIFTWGDGDKGRLGHGD-KGPKLVPTCVAALVEPNFCQVACGHCLTVALT 588

Query: 542 V 542
            
Sbjct: 589 T 589


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 158/333 (47%), Gaps = 31/333 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G H  G LGHGN++S   PK + G L G RV+ V+ G  H
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWH 241

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVL---- 387
           +  VT  G L+++G+G  G LGHGD KS   P  V  L  +  +  +CG  HT  +    
Sbjct: 242 TVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM 301

Query: 388 ---SQDGHT----VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              S  G +    +++ G G+  +LGH D  +   P  + AL     R+V  G S +VAL
Sbjct: 302 SRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVAL 361

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           T  G ++  G      L     +   P ++  L    I +VS G  HV AL+   +V  W
Sbjct: 362 TTTGHLYTMGSVSYGQLGDPQATGRLPGVLR-LGRTLIEEVSCGAYHVAALTSKGDVCTW 420

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G  +  +  D P+ V  L D  V+++  GS F+ A  +  S   + +  + +
Sbjct: 421 GKGANGRLGHGDAED-RDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGNS-M 478

Query: 557 CVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
           C   R P  FT       +   C+  G  +P+C
Sbjct: 479 CSGCRQPFGFT------RKKHNCYNCG--LPYC 503



 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 165/344 (47%), Gaps = 36/344 (10%)

Query: 173 KLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSN-IRHIEAGQFC 230
           ++   +  T +     +V++WG     ++   V    + P+L  SL S+ ++++  G++ 
Sbjct: 127 QIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYH 186

Query: 231 TFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLT 283
           +  +  +G L  +G G      LG  N+     PKRV  PLE   V +S   C   H + 
Sbjct: 187 SCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEG--VRVSSVACGPWHTVL 244

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---- 339
           VTS G+++S+G G  G LGHG+  S   P+ +   L G +  + + G  H+AAV E    
Sbjct: 245 VTSTGQLFSFGDGTFGVLGHGDRKSASMPREVE-SLKGLKTLRAACGPWHTAAVVEVMSR 303

Query: 340 --------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
                    G L+TWG+GD  RLGHGD + +  PT V  L D     V+CG S T+ L+ 
Sbjct: 304 YSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTT 363

Query: 390 DGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            GH +++MGS + G+LG  + TG++  P V+   R   + +V  G     ALT  G V  
Sbjct: 364 TGH-LYTMGSVSYGQLGDPQATGRL--PGVLRLGRTL-IEEVSCGAYHVAALTSKGDVCT 419

Query: 449 WGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           WG G         +     P LV  L   Q+  VS G S   A+
Sbjct: 420 WGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 106/240 (44%), Gaps = 22/240 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGE 381
           V Q++ G  H+A VT  G +++WGE   GRLGHG       P L+  L  S V  V+CGE
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGE 184

Query: 382 SHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            H+  ++Q G    W  G+ N G LGH ++    TPK +   L   RV  V  G   +V 
Sbjct: 185 YHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVL 244

Query: 440 LTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA----LSQY 490
           +T  G +F +G G           S   P  V  L   + +  + G  H  A    +S+Y
Sbjct: 245 VTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRY 304

Query: 491 N--------EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           +        +++ WG     + G  +    +  P+ V  L D   RQ+  G   ++A T 
Sbjct: 305 SNAGSSLSGKLFTWGDGDKNRLGHGDKEQKL-VPTCVAALVDHNFRQVACGHSLTVALTT 363


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 170/346 (49%), Gaps = 63/346 (18%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTT----------IQPLPKRVPLEAA 267
           I  +  G   T  +D  G +  +G    G LGLA+             QP P+ + L  +
Sbjct: 25  IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQS 84

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS----------QRRPKLIMG 317
           +  + ++ C +AH + +T +G++YSWG G  G+LGH +T +          Q +PKLI+ 
Sbjct: 85  VKVIQIA-CGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVV 143

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS----------RHTPTL 367
            L    V QV+ G +H+ AV  +G LY+WG G  G+LGH D  S          +  P  
Sbjct: 144 -LKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRC 202

Query: 368 VTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT----------T 415
           VT L     +  SCG+ HT+VL+  G  ++  G G+ G+LG  +  ++            
Sbjct: 203 VTALKPFKLIHASCGDVHTMVLTDQGE-IYCFGGGSCGQLGFGNISQMPLDVDSCPFMPV 261

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS-SSISFHT------ 462
           PK IE+L+   +  +  G S S+AL+ +G V+ WG      LGL     +  +T      
Sbjct: 262 PKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321

Query: 463 --PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             P  V  L + +IV +S G++H LAL++   +Y++G NT GQ GQ
Sbjct: 322 PFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ 367



 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 148/320 (46%), Gaps = 58/320 (18%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS----------QRRPKLIMGGLYGKRVTQV 327
           + H + V  +G VYSWG    G+LG  +             Q  P++I   L   +V Q+
Sbjct: 32  DGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIEL-LQSVKVIQI 90

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS----------RHTPTLVTELS--DVG 375
           + G +H+ A+T+DG LY+WG G  G+LGH D  +          +  P L+  L   +V 
Sbjct: 91  ACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKNLEVK 150

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT----------PKVIEALRKF 425
            V+CG++HT+ +  +GH ++S G+G  G+LGH DT               P+ + AL+ F
Sbjct: 151 QVACGKAHTVAVLNNGH-LYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALKPF 209

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLG--------------LRSSSISFH-TPVLVTGLS 470
           ++     G   ++ LT  G ++ +G G              L   S  F   P  +  L 
Sbjct: 210 KLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQ 269

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD-------NFSNPVDQ--PSKVVG 521
              IV +S GDSH +ALS+   VYAWG  T GQ G D       N  N   Q  P KVV 
Sbjct: 270 GIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVA 329

Query: 522 LEDVCVRQICAGSLFSIAYT 541
           L +  +  I  G   ++A T
Sbjct: 330 LMNKKIVAISCGETHTLALT 349



 Score = 95.1 bits (235), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 47/267 (17%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS----------RHTPTLV 368
           L  K + QV+ G  H+ AV   G +Y+WG    G+LG   +K           + TP ++
Sbjct: 20  LRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRII 79

Query: 369 TELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV----------TTP 416
             L  V    ++CG++HT+ L+QDG  ++S G G  G+LGH DT  +            P
Sbjct: 80  ELLQSVKVIQIACGDAHTVALTQDG-KLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKP 138

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHT--------- 462
           K+I  L+   V++V  G + +VA+  +G ++ WG G         + SF           
Sbjct: 139 KLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQP 198

Query: 463 -PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVD------ 514
            P  VT L   +++  S GD H + L+   E+Y +G  + GQ G  N S  P+D      
Sbjct: 199 IPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPF 258

Query: 515 --QPSKVVGLEDVCVRQICAGSLFSIA 539
              P K+  L+ + +  +  G   S+A
Sbjct: 259 MPVPKKIESLQGIFIVSLSCGDSHSMA 285


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  135 bits (339), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 163/349 (46%), Gaps = 30/349 (8%)

Query: 172 PKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAG 227
           P++  + GD+     H+    W        L E  G  SR R   +P    S+I  + AG
Sbjct: 33  PRVPLSAGDSHSLAVHADGSVWAWGASASGLRE-EGALSR-RFAPVPVPGLSDIVSVAAG 90

Query: 228 QFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTV 284
              +  + + G L  +G    G LG   TT + LP +V   A +  +        H L +
Sbjct: 91  GAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALPVQV---AGLSGVRAVATGLGHSLAL 147

Query: 285 TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
            ++G V++WG+ + G+LG G T     P+ I  GL G R   V+AG  HS  V +D  ++
Sbjct: 148 RADGTVWAWGLNQFGQLGDGTTSQWLTPRPI-PGLSGVR--SVAAGGFHSLVVRDDDTVW 204

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
            WG  D+G LG G    R  P  +  L +V +V+ G  H+L +  DG T+ + G  + G+
Sbjct: 205 AWGSNDYGELGDGSTSRRAVPRAIPGLRNVASVAGGCYHSLAVHADG-TLSAWGLNSYGQ 263

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF--SVALTWDGLVFWWGL------GLRSS 456
           LG        TP+ +  L   R    C  TSF  S+AL  +G V+ WGL      G  ++
Sbjct: 264 LGDGTFSNRATPRPVPGLSGVR----CVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTA 319

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           S    TP  V GLS   ++ V+ G  H LA++    V AWG N  GQ G
Sbjct: 320 SRQSPTPRPVPGLSG--VLSVATGTFHSLAVNTNGTVSAWGHNGQGQLG 366



 Score =  130 bits (327), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 109/335 (32%), Positives = 158/335 (47%), Gaps = 25/335 (7%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGKGWLGLA-----NTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           + AG   +  + + G +  +G    GL      +    P+P  VP  + IVS++      
Sbjct: 37  LSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVP--VPGLSDIVSVAAGG--- 91

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           AH L V ++G +++WG   +G+LG G T ++  P + + GL G R   V+ G  HS A+ 
Sbjct: 92  AHSLAVRADGTLWTWGGNPYGQLGDGTTTARALP-VQVAGLSGVRA--VATGLGHSLALR 148

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG ++ WG    G+LG G      TP  +  LS V +V+ G  H+LV+ +D  TVW+ G
Sbjct: 149 ADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSGVRSVAAGGFHSLVV-RDDDTVWAWG 207

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LR 454
           S + G+LG   T +   P+ I  LR   V  V  G   S+A+  DG +  WGL     L 
Sbjct: 208 SNDYGELGDGSTSRRAVPRAIPGLRN--VASVAGGCYHSLAVHADGTLSAWGLNSYGQLG 265

Query: 455 SSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             + S   TP  V GLS  + V  S    H LAL     V+AWG N  G+ G    S   
Sbjct: 266 DGTFSNRATPRPVPGLSGVRCVATSF--FHSLALRAEGTVWAWGLNGYGEQGDGTASRQS 323

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             P  V GL  V    +  G+  S+A     + SA
Sbjct: 324 PTPRPVPGLSGVL--SVATGTFHSLAVNTNGTVSA 356



 Score =  128 bits (321), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 101/274 (36%), Positives = 134/274 (48%), Gaps = 27/274 (9%)

Query: 261 RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           RVPL A           ++H L V ++G V++WG    G L     LS+R   + + GL 
Sbjct: 34  RVPLSAG----------DSHSLAVHADGSVWAWGASASG-LREEGALSRRFAPVPVPGL- 81

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG 380
              +  V+AG +HS AV  DG L+TWG   +G+LG G   +R  P  V  LS V AV+ G
Sbjct: 82  -SDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSGVRAVATG 140

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             H+L L  DG TVW+ G    G+LG   T +  TP+ I  L    VR V AG   S+ +
Sbjct: 141 LGHSLALRADG-TVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSG--VRSVAAGGFHSLVV 197

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             D  V+ WG      LG  S+S     P  + GL +  +  V+ G  H LA+     + 
Sbjct: 198 RDDDTVWAWGSNDYGELGDGSTS-RRAVPRAIPGLRN--VASVAGGCYHSLAVHADGTLS 254

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV-CV 527
           AWG N+ GQ G   FSN    P  V GL  V CV
Sbjct: 255 AWGLNSYGQLGDGTFSNRA-TPRPVPGLSGVRCV 287



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 14/185 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N + ++ D    + + PR      N+  +  G + +  + + G L  +G    G
Sbjct: 203 VWAWGSNDYGELGDGSTSRRAVPRAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLNSYG 262

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKC---SEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            LG    + +  P+ VP       LS  +C   S  H L + +EG V++WG+  +G+ G 
Sbjct: 263 QLGDGTFSNRATPRPVP------GLSGVRCVATSFFHSLALRAEGTVWAWGLNGYGEQGD 316

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G    Q      + GL G  V  V+ G  HS AV  +G +  WG    G+LG G    R 
Sbjct: 317 GTASRQSPTPRPVPGLSG--VLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRS 374

Query: 364 TPTLV 368
           TP  V
Sbjct: 375 TPVTV 379



 Score = 45.1 bits (105), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 9/136 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG-----GL 240
           A   +  WG N + Q+ D      + PR     S +R +    F +  L + G     GL
Sbjct: 249 ADGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLSGVRCVATSFFHSLALRAEGTVWAWGL 308

Query: 241 LVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
             YG+   G A+    P P+ VP  + ++S++       H L V + G V +WG    G+
Sbjct: 309 NGYGEQGDGTASRQ-SPTPRPVPGLSGVLSVATGT---FHSLAVNTNGTVSAWGHNGQGQ 364

Query: 301 LGHGNTLSQRRPKLIM 316
           LG G    +  P  ++
Sbjct: 365 LGDGTATHRSTPVTVL 380


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 157/311 (50%), Gaps = 22/311 (7%)

Query: 217 LPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSV 273
           +  +I HI A  + T  L   G +   G    G LG+     Q +P RV   AA+ +  V
Sbjct: 33  VGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRV---AALDTHMV 89

Query: 274 S--KCSEAHVLTVTSEGEVYSWGVGEHGKLGH--GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           +   C   H + VT  G + SWG  E+G+LG   GN +   +P+++ G       ++V+A
Sbjct: 90  THIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGS-RDLHFSRVAA 148

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL 387
           G  H+ A+T  G +Y++G+G  G LGHG+L    TP+LV  L  +G   ++CGE+H+  L
Sbjct: 149 GGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAAL 208

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           + DG  V++ G G  G+LGH  T  +  P  ++AL    V ++  G   ++A+T DG +F
Sbjct: 209 TVDG-KVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLF 267

Query: 448 WWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS---N 499
            WG GL       +     +P  V  L    +V VS G  H + L    EVY WG     
Sbjct: 268 SWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQR 327

Query: 500 TMGQCGQDNFS 510
            +G C + +FS
Sbjct: 328 QLGTCDRCDFS 338



 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 150/304 (49%), Gaps = 17/304 (5%)

Query: 246 GWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG+ + +  P P  +   +   IV ++ S   + H   +T EGEVY+ G  + G+LG 
Sbjct: 13  GQLGIGDYSDHPTPTSLSTLVGKDIVHIAAS---DYHTAFLTDEGEVYTTGSNDAGQLGV 69

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH--GDLKS 361
                Q  P + +  L    VT ++ G  H+ AVTE G L +WG  ++G+LG   G++  
Sbjct: 70  RGMEEQVVP-IRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVD 128

Query: 362 RHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P +V    D+    V+ G  HTL L+  G  V+S G G+ G LGH +    +TP ++
Sbjct: 129 GVQPRIVKGSRDLHFSRVAAGGYHTLALTGSG-DVYSFGDGSSGALGHGNLDGCSTPSLV 187

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQI 474
           ++L    V ++  G + S ALT DG VF WG G        S+ +   PV V  L  H +
Sbjct: 188 KSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDV 247

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           + ++ G  H LA++    +++WG    GQ G       V  P +V  LE   + Q+ AG+
Sbjct: 248 IQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGT-KEDVLSPKQVHQLEGRVLVQVSAGA 306

Query: 535 LFSI 538
             ++
Sbjct: 307 RHTV 310



 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 138/273 (50%), Gaps = 14/273 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP---RLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVY 243
            +VYT G N   Q+   VRG   +    R+ +L ++ + HI  G   T  +  TG L  +
Sbjct: 54  GEVYTTGSNDAGQL--GVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASW 111

Query: 244 GK---GWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G    G LG  +   +  +  R+   +  +  S       H L +T  G+VYS+G G  G
Sbjct: 112 GGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            LGHGN      P L+   L+G  VTQ++ G +HSAA+T DG ++TWG G +G+LGHG  
Sbjct: 172 ALGHGNLDGCSTPSLVKS-LWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGST 230

Query: 360 KSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
           ++   P  V  L   DV  ++CG  HTL ++ DG  ++S G G  G+ GH     V +PK
Sbjct: 231 QNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGR-LFSWGHGLWGQTGHGTKEDVLSPK 289

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            +  L    + +V AG   +V L   G V+ WG
Sbjct: 290 QVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWG 322



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 96/209 (45%), Gaps = 11/209 (5%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +Y  G GD G+LG GD     TPT ++ L   D+  ++  + HT  L+ +G  V++ GS 
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGE-VYTTGSN 62

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
           + G+LG     +   P  + AL    V  +  G   +VA+T  G +  WG      LG  
Sbjct: 63  DAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFD 122

Query: 455 SSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
           S +I     P +V G        V+ G  H LAL+   +VY++G  + G  G  N  +  
Sbjct: 123 SGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNL-DGC 181

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             PS V  L  + V QI  G   S A TV
Sbjct: 182 STPSLVKSLWGLGVTQIACGENHSAALTV 210



 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 188 SKVYTWGCN----LHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLL 241
             VY++G      L H  LD     CS P L +SL    +  I  G+  +  L   G + 
Sbjct: 160 GDVYSFGDGSSGALGHGNLD----GCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVF 215

Query: 242 VYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWGVGEHG 299
            +G+G  G L + + Q +   V ++A +    +   C   H L +TS+G ++SWG G  G
Sbjct: 216 TWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWG 275

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           + GHG       PK +   L G+ + QVSAG  H+  + + G +Y WG+ +  +LG
Sbjct: 276 QTGHGTKEDVLSPKQVHQ-LEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 10/159 (6%)

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  V+++G G+LG+LG  D     TP  +  L    +  + A    +  LT +G V+  G
Sbjct: 1   GVAVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                 LG+R        P+ V  L +H +  ++ G  H +A+++   + +WG +  GQ 
Sbjct: 61  SNDAGQLGVRGMEEQV-VPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119

Query: 505 GQDNFSNPVD--QPSKVVGLEDVCVRQICAGSLFSIAYT 541
           G D+  N VD  QP  V G  D+   ++ AG   ++A T
Sbjct: 120 GFDS-GNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALT 157


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  134 bits (338), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 180/359 (50%), Gaps = 22/359 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N + Q+ D   G+  RP    +P  +    I AG + +  L S G +  +G   
Sbjct: 471 VWAWGDNAYGQLGDTSGGR--RPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNS 528

Query: 246 -GWLGLANTTIQP-LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G LG   T   P  P  VP  A I  ++       H L + S G+V++WG   +G+LG 
Sbjct: 529 YGQLGAGATPRGPRAPAVVPGLAVITHVAAGLF---HSLALDSSGQVWAWGDNVYGQLGD 585

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T S+  P  + G   G  +  + AG S+S A+  DG ++TWGE  +G+LG G   +R 
Sbjct: 586 GSTTSRNVPGRVSGLPAG--IQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARP 643

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P  V+  + + A+S   SHT+ L   G  +W+ G    G+LG+      +TP+ + +  
Sbjct: 644 VPARVSLPATLVALSTRGSHTVALDTTGM-LWAWGRNVSGQLGNGTLVSESTPRRVPSF- 701

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
             RV+   +G   + AL  DG V+ WG   LG   +  +  +PV V  +   + V ++ G
Sbjct: 702 -ARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYPRTVPLASG 760

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             HVLA+S    V+++GSN+ GQ G +  +     P  + G E  C+  + AG+LFS+A
Sbjct: 761 AQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQT-SPRWLTGPE--CIEAVAAGALFSLA 816



 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 209/477 (43%), Gaps = 73/477 (15%)

Query: 126  THYQVDLIRSACLVYLILVTLADDNI-KPLGDRKSSNSNTDIDSTSTPK-LTYNIGDTDI 183
            TH    L  S  L     V    DN+   LGD  +++ N     +  P  +   +     
Sbjct: 554  THVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAIVAGPSY 613

Query: 184  SVA---HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
            SVA      V+TWG N + Q+ D        P   SLP+ +  +      T  LD+TG L
Sbjct: 614  SVALGADGSVWTWGENSNGQLGDGTTTARPVPARVSLPATLVALSTRGSHTVALDTTGML 673

Query: 241  LVYGK---GWLGLANTTIQPLPKR------------------------------------ 261
              +G+   G LG      +  P+R                                    
Sbjct: 674  WAWGRNVSGQLGNGTLVSESTPRRVPSFARVQGFASGLRTTFALRADGTVWAWGDNSLGQ 733

Query: 262  ----------VPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
                      VP++A     +V   S A HVL V+S+G V+S+G    G+LG+  + +Q 
Sbjct: 734  LGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQT 793

Query: 311  RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
             P+ + G    + +  V+AG   S A++ DG ++ WG+   G+LG G + +R  P  V  
Sbjct: 794  SPRWLTG---PECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPG 850

Query: 371  LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
            L+ V A++ G  H L +  DG TVW+ G+   G+LG   T     P  ++ L    V  V
Sbjct: 851  LAHVVAIAAGSDHALAVRADG-TVWAWGANGSGQLGDGTTTSRAVPMQVKEL--VDVVAV 907

Query: 431  CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
              G+  S+A+  DG V+ WG      LG   ++ S   PV V+ LS  Q   ++ G  H 
Sbjct: 908  AGGSGHSLAVRADGTVWAWGANGSGQLG-DGTTTSRTLPVFVSTLSGVQA--IASGAQHS 964

Query: 485  LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            LAL++   V+AWG+N  GQ G D  +    +P +V GL    V+ + AG+ FS+A T
Sbjct: 965  LALAEGGVVWAWGANGSGQLG-DGTTTSRTRPVQVSGLSG--VQGLVAGASFSLALT 1018



 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 171/384 (44%), Gaps = 65/384 (16%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
            ++ WG N+  Q+ +      S PR     + ++   +G   TF L + G +  +G   LG
Sbjct: 673  LWAWGRNVSGQLGNGTLVSESTPRRVPSFARVQGFASGLRTTFALRADGTVWAWGDNSLG 732

Query: 250  -LANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
             L N      P  VP++A     +V   S A HVL V+S+G V+S+G    G+LG+  + 
Sbjct: 733  QLGNGATSASP--VPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSA 790

Query: 308  SQRRPKLIMG---------------------GLYG------------------------- 321
            +Q  P+ + G                     G++                          
Sbjct: 791  TQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPG 850

Query: 322  -KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG 380
               V  ++AG  H+ AV  DG ++ WG    G+LG G   SR  P  V EL DV AV+ G
Sbjct: 851  LAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGG 910

Query: 381  ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              H+L +  DG TVW+ G+   G+LG   T   T P  +  L    V+ + +G   S+AL
Sbjct: 911  SGHSLAVRADG-TVWAWGANGSGQLGDGTTTSRTLPVFVSTLSG--VQAIASGAQHSLAL 967

Query: 441  TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
               G+V+ WG      LG   ++ S   PV V+GLS  Q   +  G S  LAL+   +V+
Sbjct: 968  AEGGVVWAWGANGSGQLG-DGTTTSRTRPVQVSGLSGVQ--GLVAGASFSLALTP-GKVW 1023

Query: 495  AWGSNTMGQCGQDNFSNPVDQPSK 518
            +WG+N+ GQ G D   N   QP  
Sbjct: 1024 SWGNNSAGQLG-DGTLNSRSQPGA 1046



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L VT  G V++WG    G+LG G+TL    P  ++ GL G  VT V+AG++HS A+ E
Sbjct: 59  HSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVV-GLTG--VTAVAAGNTHSMALRE 115

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           +G ++TWG    G+LG G +  R  P  V  L+ V A++ G  H+L L      VW+ G+
Sbjct: 116 EGTVWTWGTNTDGQLGDG-VSQRSVPAQVAGLTGVTAIAAGNLHSLALING--AVWAWGN 172

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI- 458
              G+LG   +   +TP  +  L +  V  + AG   S+AL  DG V+ WG G  S  + 
Sbjct: 173 NTTGQLGDGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLALKRDGTVWAWG-GNYSGQLG 229

Query: 459 -----SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY---NEVYAWGSNTMGQCGQDN 508
                S  TPV V+GL+   IV ++ G SH +A S      +V+AWG NT GQ G   
Sbjct: 230 DGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGG 285



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 28/299 (9%)

Query: 252 NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT----L 307
            T++Q +P RV   + +       C  A  L    +     WG    G+LG+G++    L
Sbjct: 335 GTSVQRVPVRV---SGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRAL 391

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT- 366
             R P L  G         ++AG  H      DG ++ WG+  +G+LG G L SR  P  
Sbjct: 392 PGRVPSLTAG-------ASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVR 444

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           L + L+ V A+S    H+L L  DG TVW+ G    G+LG    G+  +P  +  +    
Sbjct: 445 LSSTLTSVRALSASSYHSLALRSDG-TVWAWGDNAYGQLGDTSGGRRPSPAQVPGVAG-- 501

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
             ++ AGT  S+AL  DG V+ WG      LG  ++      P +V GL+   I  V+ G
Sbjct: 502 ATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLA--VITHVAAG 559

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             H LAL    +V+AWG N  GQ G D  +   + P +V GL    ++ I AG  +S+A
Sbjct: 560 LFHSLALDSSGQVWAWGDNVYGQLG-DGSTTSRNVPGRVSGLP-AGIQAIVAGPSYSVA 616



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 155/330 (46%), Gaps = 20/330 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N   Q+ +    + S P      + +  + AG   +  L   G +  +G    G
Sbjct: 69  VWAWGANAQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNTHSMALREEGTVWTWGTNTDG 128

Query: 250 -LANTTIQPLPKRVPLE-AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            L +   Q   + VP + A +  ++       H L +   G V++WG    G+LG G++ 
Sbjct: 129 QLGDGVSQ---RSVPAQVAGLTGVTAIAAGNLHSLALI-NGAVWAWGNNTTGQLGDGSST 184

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
           S+  P  + G L    V  ++AG  HS A+  DG ++ WG    G+LG G L SR TP  
Sbjct: 185 SRSTPAKVAG-L--TEVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVR 241

Query: 368 VTELSDVGAVSCGESHTLVLSQD--GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
           V+ L+ + A++ G SH++  S    G  VW+ G    G+LG+   G V++   +E     
Sbjct: 242 VSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNG--GDVSSLLPLEVPGLT 299

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDVSIG 480
           +V  + +GTS S+AL  D  V+ WG   ++ +    T     PV V+G+S  Q   ++ G
Sbjct: 300 QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQA--LACG 357

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           ++  L     N    WG+N  GQ G  + S
Sbjct: 358 NAFSLVGRGDNVTLGWGANGSGQLGNGSSS 387



 Score = 97.4 bits (241), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 125/243 (51%), Gaps = 28/243 (11%)

Query: 309 QRR-PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
           QRR P + + G    R  +++AG +HS  VT  G ++ WG    G+LG G      TPT 
Sbjct: 38  QRRAPAISVQG----RPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQ 93

Query: 368 VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
           V  L+ V AV+ G +H++ L ++G TVW+ G+   G+LG +   + + P  +  L    V
Sbjct: 94  VVGLTGVTAVAAGNTHSMALREEG-TVWTWGTNTDGQLG-DGVSQRSVPAQVAGLTG--V 149

Query: 428 RKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
             + AG   S+AL  +G V+ WG      LG   SS S  TP  V GL+  ++V ++ GD
Sbjct: 150 TAIAAGNLHSLALI-NGAVWAWGNNTTGQLG-DGSSTSRSTPAKVAGLT--EVVAIAAGD 205

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQ---DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            H LAL +   V+AWG N  GQ G    D+ S PV    +V GL  +    +  G   S+
Sbjct: 206 FHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPV----RVSGLTGIVA--LAGGGSHSV 259

Query: 539 AYT 541
           A +
Sbjct: 260 AAS 262



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 132/336 (39%), Gaps = 66/336 (19%)

Query: 147  ADDNIKPLGDRKSSNSNTDIDSTSTPK---LTYNIGDTDISVAHSKVYTWGCNLHHQILD 203
             D+++  LG+  +S S   + +   P+   L           +   V+++G N   Q+  
Sbjct: 727  GDNSLGQLGNGATSASPVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGY 786

Query: 204  EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPK 260
            E     + PR  + P  I  + AG   +  L   GG+  +G    G LG    T +  P 
Sbjct: 787  EGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPA 846

Query: 261  RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
            RVP  A +V+++       H L V ++G V++WG    G+LG G T S+  P  +     
Sbjct: 847  RVPGLAHVVAIA---AGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQV----- 898

Query: 321  GKR---VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
             K    V  V+ G  HS AV  DG ++ WG    G+LG G   SR  P  V+ LS V A+
Sbjct: 899  -KELVDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQAI 957

Query: 378  SCGESHTLVLSQ----------------DGHT---------------------------- 393
            + G  H+L L++                DG T                            
Sbjct: 958  ASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLVAGASFSLAL 1017

Query: 394  ----VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
                VWS G+ + G+LG       + P     L  F
Sbjct: 1018 TPGKVWSWGNNSAGQLGDGTLNSRSQPGAGPTLSSF 1053



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 34/369 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
           +  V+ WG N   Q+ D      S P   +  + +  I AG F +  L   G +  +G  
Sbjct: 164 NGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRDGTVWAWGGN 223

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG      +  P RV     IV+L+          + T  G+V++WG   +G+LG+
Sbjct: 224 YSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGN 283

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G  +S   P L + GL   +V  +++G SHS A+  D  ++ WG+    +        + 
Sbjct: 284 GGDVSSLLP-LEVPGL--TQVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTGTSVQR 340

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P  V+ +SD  A++CG + +LV   D  T+   G+   G+LG+  +        + AL 
Sbjct: 341 VPVRVSGVSDAQALACGNAFSLVGRGDNVTL-GWGANGSGQLGNGSS-------SVRAL- 391

Query: 424 KFRVRKVCAGTSFSVA------LTWDGLVFWWG------LGLRSSSISFHTPV-LVTGLS 470
             RV  + AG S +           DG V+ WG      LG   + +S   PV L + L+
Sbjct: 392 PGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLG-DGTLVSRPAPVRLSSTLT 450

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
           S + +  S    H LAL     V+AWG N  GQ G D        P++V G+      +I
Sbjct: 451 SVRALSAS--SYHSLALRSDGTVWAWGDNAYGQLG-DTSGGRRPSPAQVPGVAGAT--EI 505

Query: 531 CAGSLFSIA 539
            AG+  S+A
Sbjct: 506 AAGTYHSLA 514



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 95/208 (45%), Gaps = 10/208 (4%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
            A   V+ WG N   Q+ D      + P       ++  +  G   +  + + G +  +G 
Sbjct: 869  ADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVAVAGGSGHSLAVRADGTVWAWGA 928

Query: 245  --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
               G LG   TT + LP  V   + + +++       H L +   G V++WG    G+LG
Sbjct: 929  NGSGQLGDGTTTSRTLPVFVSTLSGVQAIA---SGAQHSLALAEGGVVWAWGANGSGQLG 985

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
             G T S+ RP  + G L G  V  + AG S S A+T  G +++WG    G+LG G L SR
Sbjct: 986  DGTTTSRTRPVQVSG-LSG--VQGLVAGASFSLALTP-GKVWSWGNNSAGQLGDGTLNSR 1041

Query: 363  HTPTLVTELSDVGAVSCGESHTLVLSQD 390
              P     LS   A+S G  HT+VL  D
Sbjct: 1042 SQPGAGPTLSSFVALSAGAQHTVVLRSD 1069


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 147/292 (50%), Gaps = 27/292 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-------MGGLYGKRVTQVS 328
           C E H L VT +G++YS G  E+G+LGH    S+ R + +       +  L   +V Q +
Sbjct: 44  CGEKHTLIVTKDGKLYSCGSNEYGELGH----SKPRSRAVSIDVVELVSSLSSMQVIQAA 99

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL--KSRHTPTLVTELS--DVGAVSCGESHT 384
            G   S  +T  G +++WG  D G+LG G L  +    P L+  L+   V  ++CG +H 
Sbjct: 100 GGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHC 159

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKV-TTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           L L+ DG  ++S G    G+LG   +     TP+ I  LR   + ++ +G + S  LTW 
Sbjct: 160 LALTDDGR-LFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWS 218

Query: 444 GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
             VF WG      LGL       H P L   L + +++ +S G+ H +AL++   V+++G
Sbjct: 219 RAVFGWGKNSFGQLGLNDEYDKSH-PTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFG 277

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
           +   GQ G ++  N +  P +V+ L    + Q+  G   ++A++  PS+  +
Sbjct: 278 AGGFGQLGHNSTQNEI-LPKRVMELMGSVISQVACGRRHTVAFS--PSSGKM 326



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 124/270 (45%), Gaps = 23/270 (8%)

Query: 290 VYSWGVGEHGKL--GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           V+ WG    G+L  G     S   PK +   L    + ++S G  H+  VT+DG LY+ G
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEV-SRLQELDIKEISCGEKHTLIVTKDGKLYSCG 62

Query: 348 EGDHGRLGHGDLKSRHTPTLVTEL------SDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
             ++G LGH   +SR     V EL        V   + G   +LV++  G  V+S G  +
Sbjct: 63  SNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGE-VFSWGRND 121

Query: 402 LGKLGHEDTGKVT--TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
            G+LG     K     PK++++L    V ++  G +  +ALT DG +F WG      LGL
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGL 181

Query: 454 RSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSN 511
            SS  SFH TP  +  L    I  ++ G +H   L+    V+ WG N+ GQ G  D +  
Sbjct: 182 GSSH-SFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK 240

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               P+    L +  V  I  G   ++A T
Sbjct: 241 --SHPTLCKSLRNQKVMYISCGEDHTVALT 268



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 21/267 (7%)

Query: 166 IDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQILDEVRGKCSR-----PRL-QS 216
           + S S+ ++    G ++ S+      +V++WG N   Q+    RGK S+     P+L +S
Sbjct: 87  VSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQL---GRGKLSKEEERKPKLMKS 143

Query: 217 LP-SNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANT-TIQPLPKRVPLEAAIVSL 271
           L    +  I  G      L   G L  +G    G LGL ++ +    P+++     I   
Sbjct: 144 LAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIA 203

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
            ++     H   +T    V+ WG    G+LG  +   +  P L    L  ++V  +S G 
Sbjct: 204 QIASGGN-HSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKS-LRNQKVMYISCGE 261

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQ 389
            H+ A+T++G ++++G G  G+LGH   ++   P  V EL  S +  V+CG  HT+  S 
Sbjct: 262 DHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSP 321

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               +++ GSG  G+LG  DT    +P
Sbjct: 322 SSGKMYAFGSGGSGQLGLGDTSARNSP 348


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  134 bits (338), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 99/269 (36%), Positives = 133/269 (49%), Gaps = 17/269 (6%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           S+  V +WG GE G+LG GN   +     I     +GKRV  V AG  +S A+ EDG L+
Sbjct: 3   SDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLF 62

Query: 345 TWGEGDHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGN 401
           TWG    G LGH  + K+  TPT V  L +V  V  + G  H L +   G   ++ G   
Sbjct: 63  TWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQA-YAWGGNE 121

Query: 402 LGKLGHEDTGKVTTPKVI--------EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            G+ G E   K    KV+            + RVR+V AG + SV LT +G V+ WG   
Sbjct: 122 YGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVWTWGQPW 181

Query: 454 RSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
               I    TPV V GL + Q+  +++G  H LAL +  EV+AWG+N  GQ G  + + P
Sbjct: 182 PPGDIKQISTPVRVQGLENVQL--IAVGAFHNLALLEEGEVWAWGNNEYGQLGTGD-TQP 238

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             QP  V GL  + +  I AG   S A T
Sbjct: 239 RSQPVPVQGLSGLILADIAAGGWHSTALT 267



 Score =  109 bits (272), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 147/339 (43%), Gaps = 31/339 (9%)

Query: 190 VYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           V  WG     Q+    +++    CS   L S    +  + AG   +  +   G L  +G 
Sbjct: 7   VLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFTWGW 66

Query: 245 --KGWLGL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
             +G LG    + T   P   +      IV  ++      H L V  +G+ Y+WG  E+G
Sbjct: 67  NQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGW---HCLAVDDQGQAYAWGGNEYG 123

Query: 300 KLGH-------GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           + G        G+ + +R   +        RV QV+AG +HS  +T +G ++TWG+    
Sbjct: 124 QCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVWTWGQ---- 179

Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
               GD+K   TP  V  L +V  ++ G  H L L ++G  VW+ G+   G+LG  DT  
Sbjct: 180 PWPPGDIKQISTPVRVQGLENVQLIAVGAFHNLALLEEGE-VWAWGNNEYGQLGTGDTQP 238

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
            + P  ++ L    +  + AG   S ALT D  V+ WG      LG      S   P  V
Sbjct: 239 RSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKV 298

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             L+   I  VS G +H +A +    ++++G    G+ G
Sbjct: 299 HLLAGETIAQVSCGGTHSVARTADGRIFSYGRADHGRLG 337



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 28/227 (12%)

Query: 179 GDTDISVAHS-KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDS 236
           G   + + H+  V+TWG       + ++    S P R+Q L  N++ I  G F    L  
Sbjct: 162 GTHSVVLTHNGHVWTWGQPWPPGDIKQI----STPVRVQGL-ENVQLIAVGAFHNLALLE 216

Query: 237 TGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVY 291
            G +  +G    G LG  +T  QP  + VP++  +  L ++  +    H   +T++ EVY
Sbjct: 217 EGEVWAWGNNEYGQLGTGDT--QPRSQPVPVQG-LSGLILADIAAGGWHSTALTTDAEVY 273

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           +WG GEHG+LG G+  S +     +  L G+ + QVS G +HS A T DG ++++G  DH
Sbjct: 274 AWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVARTADGRIFSYGRADH 333

Query: 352 GRLGHG-DLKSRH---------TPTLVTELSD---VGAVSCGESHTL 385
           GRLG+G  + + H          P    E S    V  V+CG  HTL
Sbjct: 334 GRLGYGRKVTTGHPMEVPIGIRPPKNAAENSGCWFVKLVACGGRHTL 380



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 21/171 (12%)

Query: 389 QDGHTVWSMGSGNLGKLG---HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
           +  H V + GSG  G+LG    ED   V + + + +  K RV  V AG+  S+A+  DG 
Sbjct: 2   ESDHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGK-RVVSVVAGSRNSLAICEDGQ 60

Query: 446 VFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           +F WG      LG    S +  TP  V  L + +IV  +IG  H LA+    + YAWG N
Sbjct: 61  LFTWGWNQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWGGN 120

Query: 500 TMGQCGQDNFSNPVDQPSKV----VGLEDVC-----VRQICAGSLFSIAYT 541
             GQCG++      +  SKV    + +   C     VRQ+ AG   S+  T
Sbjct: 121 EYGQCGEE--PERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLT 169


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 155/335 (46%), Gaps = 29/335 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E H   VT  G++Y+WG G+ G LGHGN +S   PK +   L G  V+ ++ G  H+A
Sbjct: 354 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 413

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ---- 389
            VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +    
Sbjct: 414 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 473

Query: 390 -------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                      +++ G G+ G+LGH +      P  + AL +    +V  G S +VALT 
Sbjct: 474 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 533

Query: 443 DGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G      L +S     TP  V G L    + +++ G  HV  L+   EVY WG
Sbjct: 534 SGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 593

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             + G+ G  +  +  + P+ V  L+D  V+ I  G+ F+ A  +    S +  +    C
Sbjct: 594 KGSNGRLGHGDVDD-RNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGC 652

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVT 592
              +P +F   R        C+  G  + FC   T
Sbjct: 653 --RQPFSFKRKRH------NCYNCG--LVFCHSCT 677



 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 154/332 (46%), Gaps = 30/332 (9%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           ++WG     ++   V     +P+L      +NI  +  G+F +  +  +G L  +GKG  
Sbjct: 317 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF 376

Query: 249 GL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+    N     +PKRV      + +S   C   H   VTS G+++++G G  G LGHG+
Sbjct: 377 GVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 436

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGEGDHGR 353
             S   P+ +   L G R  + + G  H+AAV E             G L+TWG+GD GR
Sbjct: 437 KKSVFIPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 495

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LGHG+ + +  PT V  L   +   V+CG S T+ L+  GH V++MGS   G+LG+    
Sbjct: 496 LGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYGQLGNSHAD 554

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSI-SFHTPVLV 466
             T  +V   L K  V ++  G      LT    V+ WG G    L    +   ++P LV
Sbjct: 555 GKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLV 614

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
             L   Q+  ++ G +   A+     ++ W S
Sbjct: 615 ESLKDKQVKSIACGTNFTAAVC----IHRWAS 642



 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 139/300 (46%), Gaps = 30/300 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+ IV L V    C   H + VT +GE +SWG    G+LGHG   + ++PKLI
Sbjct: 285 LPK--ALESTIV-LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLI 341

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-- 373
              L    +  V+ G  HS AVT  G LYTWG+GD G LGHG+  S   P  V  L +  
Sbjct: 342 -DALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGI 400

Query: 374 -VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            V +++CG  HT V++  G  +++ G G  G LGH D   V  P+ +++L+  R  +   
Sbjct: 401 HVSSIACGPYHTAVVTSAGQ-LFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAAC 459

Query: 433 GTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIV 475
           G   + A+               G +F WG G +      +      P  V  L      
Sbjct: 460 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC 519

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGS 534
            V+ G S  +AL+    VY  GS   GQ G  +       P++V G L    V +I  G+
Sbjct: 520 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT--PNRVEGKLHKSFVEEIACGA 577


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 169/366 (46%), Gaps = 27/366 (7%)

Query: 250 LANTTIQPLP-KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
           L   T +P P +R P       L  +   E H L + S GE++S+G   HG+LG  +   
Sbjct: 3   LCWNTNRPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQR 62

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTL 367
           Q +PK I   L   RV  VS G  HS AV   G ++ WG G  G+LG G+    +  P  
Sbjct: 63  QEQPKRI-PALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRK 121

Query: 368 VTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRK 424
           +  L+D+    VSCG  H+L LS+DG  +++ GS + G+LG  ++     +P+ ++ L  
Sbjct: 122 IKTLTDIKIIQVSCGHHHSLALSEDGR-LFTWGSNSHGQLGLGKECPSQASPQRVQFLDG 180

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF---HTPVLVTGLSSHQIV 475
             + +V AG + S AL+  G  F WG      L LR  ++       P  V  L +  +V
Sbjct: 181 IPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVV 240

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            +S G  H   L+Q  +V+ +G N+ GQ G    +   + P  V G+ D  V QI  GS 
Sbjct: 241 YISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGK-EGPQLVEGI-DGLVSQIDCGSY 298

Query: 536 FSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSK----V 591
            ++AY V  +   +S    P C     H         E ++      D + F  K     
Sbjct: 299 HTLAY-VYTTGKVVSFGRGPCCKSSPTHP----EAPTENFTCLISADDLVDFEVKHIFAG 353

Query: 592 THAQFI 597
           THA F+
Sbjct: 354 THANFV 359



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 161/330 (48%), Gaps = 30/330 (9%)

Query: 185 VAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLV 242
           +++ +++++G N H Q+   +V+ +    R+ +L +  +  +  G+  +  +   G +  
Sbjct: 39  LSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFA 98

Query: 243 YG---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           +G   +G LG+     I  +P+++     I  + VS C   H L ++ +G +++WG   H
Sbjct: 99  WGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVS-CGHHHSLALSEDGRLFTWGSNSH 157

Query: 299 GKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           G+LG G    SQ  P+ +   L G  +TQV+AG +HS A++  G  + WG    G+L   
Sbjct: 158 GQLGLGKECPSQASPQRVQ-FLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLA-- 214

Query: 358 DLKSRHTPTL-------VTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            L+ ++ P +       V  L ++G V  SCG  HT VL+Q G  V++ G  + G+LG+ 
Sbjct: 215 -LRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTG-KVFTFGGNSYGQLGYS 272

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFH----TP 463
            T     P+++E +    V ++  G+  ++A  +  G V  +G G    S   H    T 
Sbjct: 273 PTAGKEGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFGRGPCCKSSPTHPEAPTE 331

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
                +S+  +VD  +   H+ A +  N V
Sbjct: 332 NFTCLISADDLVDFEV--KHIFAGTHANFV 359


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 171/375 (45%), Gaps = 30/375 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++ +IE G     L+   G +  +G+   G LG         P+ V    AI S+S   C
Sbjct: 264 DVNYIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVD-SLAITSVSFVAC 322

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   V+  G++Y+WG G H  G LGHG  +S   PK + G L G +V  ++ G  H+
Sbjct: 323 GEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHT 382

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ--- 389
           A +T +G L+T+G+G  G LGHGD +S   P  +  LS   A  V+CG  HT  + +   
Sbjct: 383 ALITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVND 442

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+  +LGH +      P  + AL  +   +V  G S +VAL
Sbjct: 443 QSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVAL 502

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G VF  G      L + +     P+LV   L    + ++S G  HV  L+  +E+Y 
Sbjct: 503 TASGHVFTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYT 562

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    G+ G  +  +    P  V  L++  V+ I  G+ F+    +   +  +S     
Sbjct: 563 WGRGANGRLGHGDIED-QKTPILVEALKERHVKNIACGANFTTCICI---HKWVSGNDQS 618

Query: 556 LCVDVR-PHTFTLIR 569
           +C   R P  FT  R
Sbjct: 619 VCSGCRQPFGFTRKR 633



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 143/331 (43%), Gaps = 82/331 (24%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +++TWG +   ++         +PRL  SL  +++  +  G++ T  +  +G L  +G
Sbjct: 281 QGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVSISGDLYTWG 340

Query: 245 KGW-----LGLANTTIQPLPKRV--PLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
            G      LG        +PKRV  PLE   +VS++   C   H   +TS G+++++G G
Sbjct: 341 DGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIA---CGAWHTALITSNGKLFTFGDG 397

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-------------DGLL 343
             G LGHG+  S   PK +   L G +  +V+ G  H+AA+ E                L
Sbjct: 398 TLGVLGHGDRESVAYPKELQL-LSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKL 456

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS-- 399
           +TWG+GD  RLGH + ++   PT V  L+D     V+CG S T+ L+  GH V++MGS  
Sbjct: 457 FTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGH-VFTMGSKA 515

Query: 400 --------------------------------------------------GNLGKLGHED 409
                                                             G  G+LGH D
Sbjct: 516 YGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGD 575

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                TP ++EAL++  V+ +  G +F+  +
Sbjct: 576 IEDQKTPILVEALKERHVKNIACGANFTTCI 606


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 165/325 (50%), Gaps = 24/325 (7%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSE 278
           I+ GQ    +L  TGG+  +G    G LG        +P  +   +A  +  +++  C +
Sbjct: 213 IKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMI---SAFKNKQITQIACGK 269

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H L +   G VY+WG G  G+LG GN+     PK+I      +++T ++ G   S A++
Sbjct: 270 DHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIPKII-PHFEDEKITSIACGQEFSLALS 328

Query: 339 EDGLLYTWGEGDHGRLGH--GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           + G +++WG+G HG LG+    + S+ TP ++  L     +SCG  H++VLS+ G  V++
Sbjct: 329 DSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQISCGNWHSMVLSKSGD-VYT 387

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            GS    +LGH   G  +TP +++   K  ++K+ AG +F+  L+    ++ WG      
Sbjct: 388 FGSNIDCRLGHSGNG--STPTMVQIGSK--IKKIGAGANFNAVLSESNAIYTWGSNIHCQ 443

Query: 451 LGLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           LG+       +T  P +V  L  + I  + +G  HV+ L+   EV+ +G N+M QCG   
Sbjct: 444 LGVLLPDHRNYTGEPQVVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVGE 503

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAG 533
               V   ++V   ++  V +I AG
Sbjct: 504 AIKEVCNFTRVKIPDNSTVFKIAAG 528



 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 23/225 (10%)

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
           T +  G + +  +T+ G +Y+WG   +G+LGH        P++++   +  +  ++CG+ 
Sbjct: 211 TTIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKD 270

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+L L + G  V++ G+G+ G+LG  ++  V+ PK+I      ++  +  G  FS+AL+ 
Sbjct: 271 HSLALDEIG-VVYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSD 329

Query: 443 DGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
            G VF WG GL        S+ +S  TP ++  L       +S G+ H + LS+  +VY 
Sbjct: 330 SGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPAS--QISCGNWHSMVLSKSGDVYT 387

Query: 496 WGSNT---MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           +GSN    +G  G  +    V   SK        +++I AG+ F+
Sbjct: 388 FGSNIDCRLGHSGNGSTPTMVQIGSK--------IKKIGAGANFN 424



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 433 GTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G +F+V LT  G V+ WGL         +      P +++   + QI  ++ G  H LAL
Sbjct: 216 GQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLAL 275

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +   VYAWG+ + G+ G  N S  V  P  +   ED  +  I  G  FS+A
Sbjct: 276 DEIGVVYAWGNGSGGRLGLGN-SEVVSIPKIIPHFEDEKITSIACGQEFSLA 326



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 19/219 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSR--PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           KV++WG  LH  +  +V    S+  P++  +      I  G + + +L  +G +  +G  
Sbjct: 332 KVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQISCGNWHSMVLSKSGDVYTFGSN 391

Query: 247 W-LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE-VYSWGVGEHGKLG-- 302
               L ++     P  V + + I  +       A+   V SE   +Y+WG   H +LG  
Sbjct: 392 IDCRLGHSGNGSTPTMVQIGSKIKKIGAG----ANFNAVLSESNAIYTWGSNIHCQLGVL 447

Query: 303 ---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
              H N   + +   ++  L    ++ +  G+ H   +T+ G ++T+G+    + G G+ 
Sbjct: 448 LPDHRNYTGEPQ---VVKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCGVGEA 504

Query: 360 KSR---HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
                  T   + + S V  ++ G + +L+    GH ++
Sbjct: 505 IKEVCNFTRVKIPDNSTVFKIAAGGNSSLISLSSGHNIY 543


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 173/384 (45%), Gaps = 36/384 (9%)

Query: 190 VYTWG---CNLHHQILDEVRGKCSRPRL-----QSLPSNI----RHIEAGQFCTFLLDST 237
           VY WG   C+   +   E    C   R      + L SN+     HI  G     L+   
Sbjct: 236 VYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSRQ 295

Query: 238 GGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           G +  +G+   G LG         P+ +   AA  S+    C E H   VT  GE+Y+WG
Sbjct: 296 GEVFTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSVDFVACGEFHTCAVTMTGEIYTWG 354

Query: 295 VGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
            G H  G LGHG  +S   PK I G L G ++  VS G  H+A +T  G L+T+G+G  G
Sbjct: 355 DGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFG 414

Query: 353 RLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT-----LVLSQDGHTV-----WSMGSG 400
            LGHGD ++   P  V  LS +   AV+CG  H      ++++Q   ++     ++ G G
Sbjct: 415 VLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDG 474

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSS 456
           +  +LGH D      P  + AL      +V  G S +V LT  G V+  G      L + 
Sbjct: 475 DKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNP 534

Query: 457 SISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
           +     P LV   L    + +++ G  HV  L+  NEV+ WG    G+ G  +  +    
Sbjct: 535 NADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIED-RKA 593

Query: 516 PSKVVGLEDVCVRQICAGSLFSIA 539
           PS V  L++  V+ I  GS F+ A
Sbjct: 594 PSLVDTLKERHVKNIACGSNFTAA 617



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 144/332 (43%), Gaps = 86/332 (25%)

Query: 187 HSKVYTWG----CNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGL 240
             +V+TWG      L H +  +V G    P+L +SL + ++  +  G+F T  +  TG +
Sbjct: 295 QGEVFTWGEASGGRLGHGMGKDVTG----PQLIESLAATSVDFVACGEFHTCAVTMTGEI 350

Query: 241 LVYGKG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +G G      LG        +PKR+  PLE   ++ SVS C   H   +TS G+++++
Sbjct: 351 YTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIA-SVS-CGPWHTALITSTGQLFTF 408

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGL 342
           G G  G LGHG+  +   P+ +   L G R   V+ G  H+AA+ E            G 
Sbjct: 409 GDGTFGVLGHGDKETVFYPREVES-LSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGK 467

Query: 343 LYTWGEGDHGRLGHGDLKSRHTP------------------TLVTELSDVGAV------- 377
           L+TWG+GD  RLGHGD +SR  P                  +L   L+  G V       
Sbjct: 468 LFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTV 527

Query: 378 -----------------------------SCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
                                        +CG  H  VL+   + V++ G G  G+LGH 
Sbjct: 528 YGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSR-NEVFTWGKGANGRLGHG 586

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           D      P +++ L++  V+ +  G++F+ A+
Sbjct: 587 DIEDRKAPSLVDTLKERHVKNIACGSNFTAAI 618


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 149/308 (48%), Gaps = 29/308 (9%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAI-VSLSVSK-------------CSEAHVLTVTSEGEVY 291
           G LG  +T  Q  PKR+  +    VSLS +              C   H + VT +GEV 
Sbjct: 33  GRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTEDGEVV 92

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           SWG G  G+LG GN   Q  P ++   L   RV  V+ G+ H+A VT+ GL+  WG+G+ 
Sbjct: 93  SWGWGNEGQLGSGNAFDQTVPAVVKA-LSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNS 151

Query: 352 GRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--- 406
           G+LG GD  S   P  V+ L    +  ++CG +HTL LS +G  ++S G+G  G+LG   
Sbjct: 152 GQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGE-IYSWGAGADGQLGVGK 210

Query: 407 -HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
             E+T  V TP+ +    + +   +  G+   +A+T D  +F WG      LGL  S   
Sbjct: 211 HQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESR 270

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
           F   V+   + + +I  V+ G  H   LS   E++  G  + GQ G  + ++P     K 
Sbjct: 271 FSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGD-ADPQLTLKKA 329

Query: 520 VGLEDVCV 527
             L   C+
Sbjct: 330 RALRHGCL 337



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 26/252 (10%)

Query: 212 PRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLAN----TTIQPLPKRV 262
           PR  S   N  IR I  G   T  L   G +  +G G    LG+      T     P++V
Sbjct: 165 PRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKV 224

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
            ++          C   H + +T +  ++SWG+G  G+LG G++ S+  P ++   +   
Sbjct: 225 RVDEE-EKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENL 283

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD------LKS----RHTPTL--VTE 370
           R+  V+AG  H+A ++++G ++T G G +G+LGHGD      LK     RH   L  + +
Sbjct: 284 RICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQ 343

Query: 371 LSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           L D  +   +CG++HTLV+S  G  V++ G+   G+LG   T    +P  + +LR   V 
Sbjct: 344 LRDKKIIKAACGDTHTLVISTAGE-VFAWGAAEDGQLGTGGTEGANSPVELTSLRGL-VG 401

Query: 429 KVCAGTSFSVAL 440
            V  G   S A+
Sbjct: 402 DVSCGLVHSAAV 413



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 21/183 (11%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR----------- 428
           GE     L   G      G G  G+LGH DT     PK +   ++F V            
Sbjct: 10  GERLRRELEDGGKRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESL 69

Query: 429 ----KVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSI 479
                V  G   +VA+T DG V  WG G    L S +    T P +V  LS+H++  V+ 
Sbjct: 70  NGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVAC 129

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G  H   ++    V  WG    GQ GQ ++++ +  P  V  L +  +RQI  G   ++A
Sbjct: 130 GYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSL-LPRTVSTLYNEKIRQIACGMAHTLA 188

Query: 540 YTV 542
            +V
Sbjct: 189 LSV 191


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 174/380 (45%), Gaps = 38/380 (10%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVS 270
           +Q +   +RH+        L+   G +  +G+   G LG    T    P+ V    A+ +
Sbjct: 267 VQQIACGVRHVA-------LVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEF-LAVTN 318

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +    C E H   VT+ G++Y+WG G    G LG G  +S   PK + G L G +V  ++
Sbjct: 319 VDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIA 378

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL- 385
            G  HSA  T +G L+T+G+G  G LGHGD +S   P  V  LS +    V+CG  HT  
Sbjct: 379 CGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAA 438

Query: 386 ---VLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
              V+SQ G  V     ++ G G+  +LGH        P  + +L  +   ++  G + +
Sbjct: 439 IVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLT 498

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVT-GLSSHQIVDVSIGDSHVLALSQY 490
           VALT  G VF  G      LG  +S      P LV   L    + +VS G  HV  L+  
Sbjct: 499 VALTTSGHVFTMGGTAHGQLGNPASDGKM--PTLVQDSLVGEFVEEVSCGAHHVAVLTSR 556

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
           +E+Y WG    G+ G  +  +    P+ V  L+D  V+ I  GS F+ +  +   +  +S
Sbjct: 557 SELYTWGKGANGRLGHGDTED-RRTPTLVEALKDRHVKNISCGSNFTTSICI---HKWVS 612

Query: 551 SAFTPLCVDVRPHTFTLIRE 570
            A   +C   R   F   R+
Sbjct: 613 GADQSVCSGCR-QAFGFTRK 631


>gi|196007790|ref|XP_002113761.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
 gi|190584165|gb|EDV24235.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
          Length = 507

 Score =  134 bits (337), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 182/404 (45%), Gaps = 44/404 (10%)

Query: 161 NSNTDIDSTSTPKLTYNIGDTDISVAHS--KVYTWGCNLHHQILDEVRGKCSRP---RLQ 215
           N    + + S P     + DT+   AH    V+ WG N   ++   +      P   R +
Sbjct: 115 NEKNQVIAASPPNNGIILEDTESDFAHVMVDVFAWGNNHSGELGIPLSKNIEYPAPARCK 174

Query: 216 SLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP-LEAAIVSLS 272
           ++ S +R   I+ G   T++L   G   VYG G + L           VP L   +  L+
Sbjct: 175 AI-SKLRPIMIKGGHDKTYILSQEGK--VYGIGQVELKEDEHDSKNLHVPRLINGLSHLT 231

Query: 273 VSKCS---EAH-VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           + K     + H  L +T +GE+YSWG                 P   +  +     T +S
Sbjct: 232 IIKLDIHPDGHFALGITIKGELYSWG---------------ETPAQQITSVKDAIFTNIS 276

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCG---ESH 383
            G  H AA+T  G LYTWG G  G LGHG+ K+   PTLV  L+D  V  V+CG   ++H
Sbjct: 277 CGRDHRAAITNQGKLYTWGYGGLGCLGHGNSKTCLEPTLVEALADKVVIDVACGSANQNH 336

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGH--EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           T+ ++ D   VWS G    GKLG     T   T P VI+ L    V +V  G++F++ALT
Sbjct: 337 TVAVTSD-DKVWSWGDPAGGKLGRIINSTKPCTLPGVIDGLLNKSVHRVICGSAFTLALT 395

Query: 442 WDGLVFWWGLGLRSSSI-----SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G ++ WG G    S      S   P +V  L   +++ ++ G  H LA + Y E+YAW
Sbjct: 396 TSGSLYSWGHGSHYHSQHGIVGSVERPKIVDVLKDKRVIAIAAGSLHWLACTIYGEIYAW 455

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           G+N  GQ G     +  D   +V  L D  + Q+  G     A+
Sbjct: 456 GNNDAGQLGVKTLKSSTD-VIQVDTLMDEDINQVSCGFSHCFAW 498



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 135/302 (44%), Gaps = 37/302 (12%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           P P R    + +  + + K        ++ EG+VY  G  E  +  H ++ +   P+LI 
Sbjct: 168 PAPARCKAISKLRPIMI-KGGHDKTYILSQEGKVYGIGQVELKEDEH-DSKNLHVPRLI- 224

Query: 317 GGLYGKRVTQVSA---GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL-VTELS 372
            GL    + ++     GH  +  +T  G LY+WGE               TP   +T + 
Sbjct: 225 NGLSHLTIIKLDIHPDGH-FALGITIKGELYSWGE---------------TPAQQITSVK 268

Query: 373 DV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
           D     +SCG  H   ++  G  +++ G G LG LGH ++     P ++EAL    V  V
Sbjct: 269 DAIFTNISCGRDHRAAITNQG-KLYTWGYGGLGCLGHGNSKTCLEPTLVEALADKVVIDV 327

Query: 431 CAGTS---FSVALTWDGLVFWWG------LG-LRSSSISFHTPVLVTGLSSHQIVDVSIG 480
             G++    +VA+T D  V+ WG      LG + +S+     P ++ GL +  +  V  G
Sbjct: 328 ACGSANQNHTVAVTSDDKVWSWGDPAGGKLGRIINSTKPCTLPGVIDGLLNKSVHRVICG 387

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
            +  LAL+    +Y+WG  +     Q      V++P  V  L+D  V  I AGSL  +A 
Sbjct: 388 SAFTLALTTSGSLYSWGHGSHYH-SQHGIVGSVERPKIVDVLKDKRVIAIAAGSLHWLAC 446

Query: 541 TV 542
           T+
Sbjct: 447 TI 448


>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
           Kuenenia stuttgartiensis]
          Length = 387

 Score =  134 bits (337), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 169/325 (52%), Gaps = 21/325 (6%)

Query: 190 VYTWGCNLHHQILD-EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW- 247
           +++WG N + Q+ D  ++ K S  +++ L S+I  I+ G + +  L S G +  +G  W 
Sbjct: 58  LWSWGKNEYGQLGDGTIKNKHSPVQVKHL-SSIIVIDGGAWHSIALKSDGTVWAWGGNWA 116

Query: 248 --LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
             LG  +     +P +    + I+++S   C   H L + S+G V++WG+ + G+LG G+
Sbjct: 117 GQLGDGSYKSSNIPIKTKELSGIIAIS---CGGQHNLALKSDGTVWAWGINDKGQLGIGD 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
             +Q+ P  I G      +  +SAG  HS A+  DG L+ WG  +  +LG G   +R +P
Sbjct: 174 AKNQQIPIRIPGL---NNIVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSP 230

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V+ L D+ AV+ G   +L L  DG T+ + GS  L +LG   T    TP  +  +R  
Sbjct: 231 VHVSNLRDIIAVNGGGDFSLALKSDG-TIMAWGSNGLSQLGDGTTTNRNTPVNVSDVRD- 288

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG-LGL----RSSSISFHTPVLVTGLSSHQIVDVSIG 480
            + ++ A  + S+ALT +G V+ +G +G     +  ++  + PVLV  ++   ++ ++ G
Sbjct: 289 -IIEIAAKGNHSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPVLVNEITD--VIAIACG 345

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCG 505
           + H + L     ++ WG N  GQ G
Sbjct: 346 EFHNVVLKNDGSLWVWGINNFGQLG 370



 Score =  122 bits (305), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 18/269 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +  +G ++SWG  E+G+LG G   ++  P  +    +   +  +  G  HS A+  
Sbjct: 48  HTLALKPDGSLWSWGKNEYGQLGDGTIKNKHSPVQVK---HLSSIIVIDGGAWHSIALKS 104

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG    G+LG G  KS + P    ELS + A+SCG  H L L  DG TVW+ G 
Sbjct: 105 DGTVWAWGGNWAGQLGDGSYKSSNIPIKTKELSGIIAISCGGQHNLALKSDG-TVWAWGI 163

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
            + G+LG  D      P  I  L    +  + AG   S+A+  DG ++ WG      LG 
Sbjct: 164 NDKGQLGIGDAKNQQIPIRIPGLNN--IVAISAGGYHSLAIKSDGSLWAWGSNNMEQLG- 220

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S+ +  +PV V+ L    I+ V+ G    LAL     + AWGSN + Q G    +N  
Sbjct: 221 DGSATNRCSPVHVSNL--RDIIAVNGGGDFSLALKSDGTIMAWGSNGLSQLGDGTTTNR- 277

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           + P  V  + D+   +I A    S+A T+
Sbjct: 278 NTPVNVSDVRDII--EIAAKGNHSLALTI 304



 Score =  119 bits (299), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 89/282 (31%), Positives = 145/282 (51%), Gaps = 17/282 (6%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAA-IVSLSVSKCSEAHV 281
           I AG F T  L   G L  +GK   G L + TI+   K  P++   + S+ V      H 
Sbjct: 42  IAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKN--KHSPVQVKHLSSIIVIDGGAWHS 99

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + + S+G V++WG    G+LG G+  S   P +    L G  +  +S G  H+ A+  DG
Sbjct: 100 IALKSDGTVWAWGGNWAGQLGDGSYKSSNIP-IKTKELSG--IIAISCGGQHNLALKSDG 156

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            ++ WG  D G+LG GD K++  P  +  L+++ A+S G  H+L +  DG ++W+ GS N
Sbjct: 157 TVWAWGINDKGQLGIGDAKNQQIPIRIPGLNNIVAISAGGYHSLAIKSDG-SLWAWGSNN 215

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL-GLRS----S 456
           + +LG        +P  +  LR   +  V  G  FS+AL  DG +  WG  GL      +
Sbjct: 216 MEQLGDGSATNRCSPVHVSNLRD--IIAVNGGGDFSLALKSDGTIMAWGSNGLSQLGDGT 273

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           + + +TPV V+ +    I++++   +H LAL+   +V+ +GS
Sbjct: 274 TTNRNTPVNVSDV--RDIIEIAAKGNHSLALTIEGKVWEFGS 313



 Score =  107 bits (267), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 13/219 (5%)

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
           +++AG  H+ A+  DG L++WG+ ++G+LG G +K++H+P  V  LS +  +  G  H++
Sbjct: 41  KIAAGAFHTLALKPDGSLWSWGKNEYGQLGDGTIKNKHSPVQVKHLSSIIVIDGGAWHSI 100

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
            L  DG TVW+ G    G+LG         P   + L    +  +  G   ++AL  DG 
Sbjct: 101 ALKSDG-TVWAWGGNWAGQLGDGSYKSSNIPIKTKELSG--IIAISCGGQHNLALKSDGT 157

Query: 446 VFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           V+ WG+  +       + +   P+ + GL++  IV +S G  H LA+     ++AWGSN 
Sbjct: 158 VWAWGINDKGQLGIGDAKNQQIPIRIPGLNN--IVAISAGGYHSLAIKSDGSLWAWGSNN 215

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           M Q G  + +N    P  V  L D+    +  G  FS+A
Sbjct: 216 MEQLGDGSATNRC-SPVHVSNLRDIIA--VNGGGDFSLA 251



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 74/283 (26%), Positives = 112/283 (39%), Gaps = 60/283 (21%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N   Q+ D      + P      S I  I  G      L S G +  +G   KG
Sbjct: 108 VWAWGGNWAGQLGDGSYKSSNIPIKTKELSGIIAISCGGQHNLALKSDGTVWAWGINDKG 167

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG+ +   Q +P R+P    IV++S       H L + S+G +++WG     +LG G+ 
Sbjct: 168 QLGIGDAKNQQIPIRIPGLNNIVAISAGG---YHSLAIKSDGSLWAWGSNNMEQLGDGSA 224

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            ++  P  +      + +  V+ G   S A+  DG +  WG     +LG G   +R+TP 
Sbjct: 225 TNRCSPVHVSNL---RDIIAVNGGGDFSLALKSDGTIMAWGSNGLSQLGDGTTTNRNTPV 281

Query: 367 --------------------------------------------------LVTELSDVGA 376
                                                             LV E++DV A
Sbjct: 282 NVSDVRDIIEIAAKGNHSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPVLVNEITDVIA 341

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           ++CGE H +VL  DG ++W  G  N G+LG    G  T P +I
Sbjct: 342 IACGEFHNVVLKNDG-SLWVWGINNFGQLGDGTVGSKTKPVLI 383


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  134 bits (337), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 163/344 (47%), Gaps = 28/344 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++ +I  G     L+   G +  +G+   G LG       P PK +   A + ++ +  C
Sbjct: 299 DVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGM-NIELVAC 357

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G +  G LGHG+  S   PK I G + G  V+ VS G  H+
Sbjct: 358 GENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHT 417

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ--- 389
           AAVT  G L+T+G+G  G LGHGD  S   P  V  L  +    VSCG  HT    +   
Sbjct: 418 AAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITT 477

Query: 390 -----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
                          +++ G+G+  +LGH D      P+ + AL    + +V  G + ++
Sbjct: 478 ESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTL 537

Query: 439 ALTWDGLVFWWGL----GLRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNEV 493
           ALT  G V+  G      L +   +   P +V G  + +I+ +++ G  HV  L+   EV
Sbjct: 538 ALTAAGRVYTMGSTSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEV 597

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           Y WG  T GQ G  + +   +QP+ V  L D  VR +  GS F+
Sbjct: 598 YTWGKGTNGQLGHGD-NKDRNQPTVVDFLRDKQVRAVACGSNFT 640



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 133/327 (40%), Gaps = 76/327 (23%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           ++++WG     ++   ++     P+L  +L   NI  +  G+  T  +  +G L  +G G
Sbjct: 318 EIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDG 377

Query: 247 -----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
                 LG  +     +PKR+  +   + +S   C   H   VTS G+++++G G  G L
Sbjct: 378 AYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGAL 437

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------------DGLLYTW 346
           GHG+  S   P+ +   L G R  +VS G  H+AA  E                G L+TW
Sbjct: 438 GHGDHSSATVPREVET-LRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTW 496

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT----------- 393
           G GD  RLGHGD + R  P  V  L D  +  V+CG + TL L+  G             
Sbjct: 497 GNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRVYTMGSTSYGQL 556

Query: 394 ----------------------------------------VWSMGSGNLGKLGHEDTGKV 413
                                                   V++ G G  G+LGH D    
Sbjct: 557 GNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDR 616

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
             P V++ LR  +VR V  G++F+  +
Sbjct: 617 NQPTVVDFLRDKQVRAVACGSNFTAII 643


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  134 bits (336), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 147/282 (52%), Gaps = 21/282 (7%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N++   +P+ +     +  L + +  C ++H L +T +GEV+SWG
Sbjct: 88  VYSWGWGDFGRLGHGNSSDLFIPRAIK---GLKGLEIKQIACGDSHCLAITGDGEVHSWG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G+T     P  +     G  V  ++AG  H+AAVTE G LY WG G +G L
Sbjct: 145 RNQNGQLGLGHTEDVLVPNKVAA-FEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V  +    +  V+CG  HT+ ++  G+ +++ G    G+LGH D   
Sbjct: 204 GLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGN-LYTFGWSKYGQLGHGDFED 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P  ++AL+   ++ V  G   +VAL  DG ++ WG      +G  ++    ++P L+
Sbjct: 263 HLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTD-DHNSPKLI 321

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           TG+ + ++  V+ G  H +A++    VY+WG  T GQ G  +
Sbjct: 322 TGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGD 363



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 7/191 (3%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           +RV  VSAG SH+ A+    L+ +WG G+ G+LGHGD + RH P +++ L D  + +++C
Sbjct: 14  RRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITC 73

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S+   TV+S G G+ G+LGH ++  +  P+ I+ L+   ++++  G S  +A
Sbjct: 74  GADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLA 133

Query: 440 LTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           +T DG V  WG          HT     P  V       +  ++ G  H  A+++  ++Y
Sbjct: 134 ITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLY 193

Query: 495 AWGSNTMGQCG 505
            WG    G  G
Sbjct: 194 GWGWGRYGNLG 204



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 16/281 (5%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           ++S+S      +H + + S   V SWG GE G+LGHG+   +  P L++  L    ++ +
Sbjct: 16  VISVSAGA---SHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLP-LVISALDDCEISSI 71

Query: 328 SAGHSHSAAVTEDG-LLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHT 384
           + G  H+ A +E    +Y+WG GD GRLGHG+      P  +  L   ++  ++CG+SH 
Sbjct: 72  TCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHC 131

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L ++ DG  V S G    G+LG   T  V  P  + A     V+ + AG   + A+T  G
Sbjct: 132 LAITGDGE-VHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESG 190

Query: 445 LVFWWGLGLRSSSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            ++ WG G R  ++          P  V  +   ++  V+ G  H +A++    +Y +G 
Sbjct: 191 KLYGWGWG-RYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGW 249

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +  GQ G  +F + +  P +V  L++  ++ +  G   ++A
Sbjct: 250 SKYGQLGHGDFEDHL-VPHQVQALKNKTIQAVSGGWRHTVA 289



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKR-VPLEAAIV---SLSVSKC 276
           ++ + AG   T  +  +G L  YG GW    N  +     R VP E A V    +++  C
Sbjct: 173 VKMLAAGAEHTAAVTESGKL--YGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVAC 230

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
              H + V + G +Y++G  ++G+LGHG+      P  +   L  K +  VS G  H+ A
Sbjct: 231 GWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQA-LKNKTIQAVSGGWRHTVA 289

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV 394
           + EDG LY WG    G++G G+    ++P L+T + +  V  V+CG  HT+ ++  G+ V
Sbjct: 290 LDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGN-V 348

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           +S G G  G+LGH D      PK IE L
Sbjct: 349 YSWGRGTSGQLGHGDAVDRCVPKRIELL 376



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 11/195 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEA-GQFCTFLLDSTGGLLVYG- 244
            K+Y WG   +  + L +   +     + ++P    ++ A G   T  + ++G L  +G 
Sbjct: 190 GKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGW 249

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGK 300
              G LG  +     +P +V    A+ + ++   S    H + +  +GE+Y WG  + G+
Sbjct: 250 SKYGQLGHGDFEDHLVPHQVQ---ALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQ 306

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +G GNT     PKLI G +  ++VT+V+ G  H+ A+T+ G +Y+WG G  G+LGHGD  
Sbjct: 307 VGCGNTDDHNSPKLITG-IVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAV 365

Query: 361 SRHTPTLVTELSDVG 375
            R  P  +  LS  G
Sbjct: 366 DRCVPKRIELLSADG 380


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 157/334 (47%), Gaps = 34/334 (10%)

Query: 276 CSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G   +G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 368 CGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWH 427

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +  
Sbjct: 428 TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVM 487

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +  V +V  G S +VAL
Sbjct: 488 VGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV-ALAEHNVCQVACGHSLTVAL 546

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P+LV G LS   + +++ G  HV  L+   EVY 
Sbjct: 547 TTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYT 606

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S     
Sbjct: 607 WGKGANGRLGHGD-TDDRNTPTLVEALKDKDVKSIACGTTFTAAICL---HKWVSGVDQS 662

Query: 556 LCVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
           +C   R P  F   R        C+  G  + FC
Sbjct: 663 MCSGCRMPFNFKRKRH------NCYNCG--LVFC 688



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 125/265 (47%), Gaps = 26/265 (9%)

Query: 264 LEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           LE+A+V L V    C   H   VT +GEV+SWG    G+LGHG       PKLI   L  
Sbjct: 303 LESAVV-LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIE-ALSN 360

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLVT---ELSDVGA 376
             +  V+ G  HS AVT  G LYTWG G  ++G LGHG+  S   P  V    E   V  
Sbjct: 361 TNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSY 420

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           +SCG  HT V++  G  +++ G G  G LGH D   V+ P+ +E+L+  R  +   G   
Sbjct: 421 ISCGPWHTAVVTSAGQ-LFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWH 479

Query: 437 SVALTWDGL------------VFWWGLG--LRSSSISFHTPVLVT--GLSSHQIVDVSIG 480
           + A+    +            +F WG G   R   +     ++ T   L+ H +  V+ G
Sbjct: 480 TAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQVACG 539

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCG 505
            S  +AL+    VY  GS   GQ G
Sbjct: 540 HSLTVALTTSGRVYTMGSPVYGQLG 564



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 35/330 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++   V      P+L ++L  +NI  +  G++ +  +  +G L  +G
Sbjct: 327 QGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWG 386

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   + +S   C   H   VTS G+++++G G 
Sbjct: 387 NGTYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFGDGT 444

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL------------LYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E  +            L+T
Sbjct: 445 FGALGHGDRKSVSLPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFT 503

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVT-ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           WG+GD GRLGH D +++  PT V     +V  V+CG S T+ L+  G  V++MGS   G+
Sbjct: 504 WGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQVACGHSLTVALTTSGR-VYTMGSPVYGQ 562

Query: 405 LGH-EDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSS 457
           LG+ +  GK+  P ++E  L +  V ++  G      LT    V+ WG G         +
Sbjct: 563 LGNPQADGKL--PILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 620

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              +TP LV  L    +  ++ G +   A+
Sbjct: 621 DDRNTPTLVEALKDKDVKSIACGTTFTAAI 650



 Score = 41.2 bits (95), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E+     V+ +  G   +  +T  G VF WG      LG    S   H P L+  L
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLH-PKLIEAL 358

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           S+  I  V+ G+ H  A++   ++Y WG+ T
Sbjct: 359 SNTNIELVACGEYHSCAVTLSGDLYTWGNGT 389


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 171/374 (45%), Gaps = 31/374 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEA-AIVSLSVSK 275
           +++ I  G     L    G +  +G+   G LG         PK V  EA A+ ++    
Sbjct: 244 DVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLV--EALAVSNVEYVA 301

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   +T+ G++Y+WG G +  G LGHG   S   PK + G L G +V  VS G  H
Sbjct: 302 CGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWH 361

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL---- 387
           SA  T  G ++T+G+G  G LGHG+  +   P  V  LS      V+CG  H+  +    
Sbjct: 362 SALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETT 421

Query: 388 SQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           +Q G  V     ++ G+G+   LGH D      P  +++L  +   +V  G S ++AL+ 
Sbjct: 422 NQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALST 481

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF  G      LG   S     TPV    L+   + ++S G  HV  L+  +EVY W
Sbjct: 482 SGHVFTMGSSSNGQLGNPKSDGKHPTPVQ-DRLAGELVEEISCGSCHVAVLTSRSEVYTW 540

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G     +   +P+ V  L+D  V+ I  GS F+    +   +  +S A   +
Sbjct: 541 GMGANGRLGHGGVEDK-KKPTLVEALKDRHVKSIACGSNFTTCICI---HKWVSGADQSV 596

Query: 557 CVDVR-PHTFTLIR 569
           C   R P  FT  R
Sbjct: 597 CSGCRQPFGFTRKR 610


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 184/402 (45%), Gaps = 38/402 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG    +  P PK +    +  ++ +  C
Sbjct: 313 DVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIE-SLSNTNIELVAC 371

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G   +G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHT 431

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD KS   P  +  L  +  V  +CG  HT  + +   
Sbjct: 432 AVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMV 491

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  +  L +   +  C G S +VAL+
Sbjct: 492 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNCQVAC-GHSMTVALS 550

Query: 442 WDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L ++      P+ V G LS   + +++ G  HV  L+   EV+ W
Sbjct: 551 RSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTW 610

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G  + +N  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S     +
Sbjct: 611 GKGANGRLGHGD-TNDRNTPTLVEALKDKQVKSIACGTNFTAAICL---HKWVSGVDQSM 666

Query: 557 CVDVR-PHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFI 597
           C   R P  F   R        C+  G  + FC   ++ + +
Sbjct: 667 CSGCRVPFNFKRKRH------NCYNCG--LVFCHSCSNKKSV 700



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 148/327 (45%), Gaps = 76/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++   V      P+L +SL  +NI  +  G++ T  +  +G L  +G
Sbjct: 330 QGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWG 389

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 390 DGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS-SIS-CGPWHTAVVTSSGQLFTFGDGT 447

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ I   L G R  Q + G  H+AAV E             G L+T
Sbjct: 448 FGALGHGDRKSVSLPREIES-LKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 506

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGA-VSCGESHTLVLSQDGHT----------- 393
           WG+GD GRLGHGD +S+  PT V  L +    V+CG S T+ LS+ GH            
Sbjct: 507 WGDGDKGRLGHGDKESKLVPTCVVTLVEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQL 566

Query: 394 ----------------------------------------VWSMGSGNLGKLGHEDTGKV 413
                                                   V++ G G  G+LGH DT   
Sbjct: 567 GNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDR 626

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
            TP ++EAL+  +V+ +  GT+F+ A+
Sbjct: 627 NTPTLVEALKDKQVKSIACGTNFTAAI 653



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 138/302 (45%), Gaps = 33/302 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+A+V L V    C   H   VT +GEV+SWG    G+LGHG       PKLI
Sbjct: 302 LPK--ALESAVV-LDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLI 358

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLVT---E 370
              L    +  V+ G  H+ AVT  G LYTWG+G  ++G LGHG+  S   P  V    E
Sbjct: 359 E-SLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLE 417

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V ++SCG  HT V++  G  +++ G G  G LGH D   V+ P+ IE+L+  R  + 
Sbjct: 418 GIHVSSISCGPWHTAVVTSSGQ-LFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQA 476

Query: 431 CAGTSFSVAL------------TWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         S   P  V  L    
Sbjct: 477 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN 536

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +ALS+   VY  GS   GQ G       +  P +V G L    V +I  
Sbjct: 537 -CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKL--PIRVEGKLSKSFVEEIAC 593

Query: 533 GS 534
           G+
Sbjct: 594 GA 595


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 19/308 (6%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  N  I   P  +    +++S++       H + +TS  +VYS G  E G+LG
Sbjct: 9   YGQLGLGSENMLIS-CPSPIDANQSVISIA---SGLRHTVYLTSTRKVYSCGSNEFGQLG 64

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                SQ RP L+  G   + +  V+AG   S A+ E GLL+ WG   +G L      S 
Sbjct: 65  QQK--SQCRPSLVT-GFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL-MCKQDSL 120

Query: 363 HTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVI 419
           H P L+ ++    V  V+CG  H + L+++G T+ S GS   G+LG   +  +   P +I
Sbjct: 121 HEPKLLDKIMHWSVVQVACGAQHCIALTEEG-TILSWGSNTQGQLGLGSSEIEFLEPTII 179

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
            +L  F + ++CAG   S  L+  G +F WG      LG  +S     +P LV  L   +
Sbjct: 180 ASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVKTLRHQE 239

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           +V V++G+ H +  ++   V++WG    GQ G ++ +N V QP K++ L    V QIC G
Sbjct: 240 VVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMAN-VTQPKKIMELMGTTVCQICCG 298

Query: 534 SLFSIAYT 541
              +I+ T
Sbjct: 299 RRHTISLT 306



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 137/272 (50%), Gaps = 15/272 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           KVY+ G N   Q L + + +C RP L +      I H+ AG F +  +  +G L  +G+ 
Sbjct: 51  KVYSCGSNEFGQ-LGQQKSQC-RPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRS 108

Query: 247 WLGLANTTIQPL--PKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G        L  PK   L   I+  SV +  C   H + +T EG + SWG    G+LG
Sbjct: 109 LNGELMCKQDSLHEPK---LLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLG 165

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS- 361
            G++  +     I+  L    ++Q+ AG  HS  ++  G L+TWG+ + G+LGHG+  S 
Sbjct: 166 LGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSF 225

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           + +P LV  L   +V  V+ GE H++  +++G  V+S G G  G+LGH     VT PK I
Sbjct: 226 QSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNG-GVFSWGHGGNGQLGHNSMANVTQPKKI 284

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             L    V ++C G   +++LT    +  +GL
Sbjct: 285 MELMGTTVCQICCGRRHTISLTDKRKLLGFGL 316



 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 8/200 (4%)

Query: 343 LYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           +Y WG+ D+G+LG G        P+ +     V +++ G  HT+ L+     V+S GS  
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDANQSVISIASGLRHTVYLTST-RKVYSCGSNE 59

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI--- 458
            G+LG + +     P ++       +  V AG  FS+A+   GL+F WG  L    +   
Sbjct: 60  FGQLGQQKSQ--CRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQ 117

Query: 459 -SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            S H P L+  +    +V V+ G  H +AL++   + +WGSNT GQ G  +      +P+
Sbjct: 118 DSLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPT 177

Query: 518 KVVGLEDVCVRQICAGSLFS 537
            +  L    + QICAG+  S
Sbjct: 178 IIASLNAFPISQICAGAYHS 197



 Score = 83.6 bits (205), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 16/261 (6%)

Query: 290 VYSWGVGEHGKLGHGN-TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           +Y WG  ++G+LG G+  +    P  I      + V  +++G  H+  +T    +Y+ G 
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPIDAN---QSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 349 GDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            + G+LG    KS+  P+LVT     ++  V+ G+  ++ +++ G       S N   + 
Sbjct: 58  NEFGQLGQQ--KSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            +D+  +  PK+++ +  + V +V  G    +ALT +G +  WG      LGL SS I F
Sbjct: 116 KQDS--LHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEF 173

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
             P ++  L++  I  +  G  H   LS    ++ WG N  GQ G  N  +    P  V 
Sbjct: 174 LEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSSPRLVK 233

Query: 521 GLEDVCVRQICAGSLFSIAYT 541
            L    V  +  G   S+  T
Sbjct: 234 TLRHQEVVFVAMGEEHSVCRT 254


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  133 bits (335), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 173/378 (45%), Gaps = 27/378 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  I  G     L    G +  +G+   G LG         PK V    ++  + +  C
Sbjct: 257 DVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE-SLSLTVVDLISC 315

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT+ G++++WG G +  G LG G  +S   PK + G L G +V  V+ G  HS
Sbjct: 316 GEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHS 375

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL----VLS 388
           A  T  G LYT+G+G  G LGHGD ++   P  V  LS      V+CG  H+     V +
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTN 435

Query: 389 QDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           Q G  V     ++ G G+  +LGH D      PK ++AL ++   ++  G + +VAL   
Sbjct: 436 QTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALATS 495

Query: 444 GLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G VF  G      L +       P LV   L+S  + ++S G SHV  L+  +EVY WG 
Sbjct: 496 GRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGM 555

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
              G+ G  +  +   +P  V  L+D  V+ I  GS F+    +   +  +S A   +C 
Sbjct: 556 GANGRLGHGDLKDR-KKPCLVEALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVCT 611

Query: 559 DVRPHTFTLIREFLEQYS 576
             R   F   R+  + Y+
Sbjct: 612 GCR-QAFGFTRKRHDCYN 628


>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 747

 Score =  133 bits (335), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 161/340 (47%), Gaps = 21/340 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--- 244
            +V++WG N   Q+ + +      P L  L   +  + AG   T +L     +  +G   
Sbjct: 418 GRVWSWGDNEDGQLGNGIGADKLTPALTGLTGAVS-VVAGNRHTVVLKGDTTVWAWGVNS 476

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           +G +G         P RV   + I ++S       H L + ++G V++WG   +G+LG+G
Sbjct: 477 RGEVGDGTNANTSQPVRVLGLSGITAISAGAY---HSLALRTDGTVWAWGFNRYGQLGNG 533

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T+ Q +P  + G L G  VT ++AGHSHS A+  DG ++ WG    G++G G       
Sbjct: 534 GTVDQNQPVQVAG-LSG--VTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNWHIL 590

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P     LS V A++ G  H+L L  DG TVWS G    G+LG+     +  P  +  L  
Sbjct: 591 PVQAVGLSSVTAITAGGYHSLALRSDG-TVWSWGYNGSGQLGNGALASLNAPGPVSNLTG 649

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSI 479
             V  + AG   S+AL  DG V  WG          S  + H PV+V G+S   +V V  
Sbjct: 650 --VVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVAGMSG--VVSVIA 705

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
           GD H +A+      +AWG+NT GQ G D   N    P +V
Sbjct: 706 GDHHSMAMRSDGTTWAWGANTEGQLG-DGTRNDSIIPVRV 744



 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 209/446 (46%), Gaps = 35/446 (7%)

Query: 106 KSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTD 165
           +S+P   A + L + +   A +Y    +RS   V+       D+  + LG+   ++S   
Sbjct: 290 RSVP---AQVGLTDVMAAVAGNYHSLAVRSDGAVW----AWGDNRYRQLGNGNMTSSLLP 342

Query: 166 IDSTSTPKLTYNIG-DTDISV-AHSKVYTWGCNLHHQILDEV-RGKCSRPRLQSLPSNIR 222
           I +  +  +T   G    +++ A   V++WG N+  Q+ D   + + S  R+ +      
Sbjct: 343 IQAGLSGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNP 402

Query: 223 HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
            + +GQ  +   DS G +  +G    G LG      +  P    L  A+  ++ ++    
Sbjct: 403 GVASGQLHSVYRDSAGRVWSWGDNEDGQLGNGIGADKLTPALTGLTGAVSVVAGNR---- 458

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + +  +  V++WGV   G++G G   +  +P  ++G L G  +T +SAG  HS A+  
Sbjct: 459 HTVVLKGDTTVWAWGVNSRGEVGDGTNANTSQPVRVLG-LSG--ITAISAGAYHSLALRT 515

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   +G+LG+G    ++ P  V  LS V A++ G SH+L L  DG TVW+ G 
Sbjct: 516 DGTVWAWGFNRYGQLGNGGTVDQNQPVQVAGLSGVTAIAAGHSHSLALCGDG-TVWAWGY 574

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G++G         P  ++A+    V  + AG   S+AL  DG V+ WG      LG 
Sbjct: 575 NFDGQIGSGTNNWHILP--VQAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQLG- 631

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +  S + P  V+ L+   +V ++ GD H LAL     V AWG N  GQ G  + +N  
Sbjct: 632 NGALASLNAPGPVSNLTG--VVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNR- 688

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
             P  V G+  V    + AG   S+A
Sbjct: 689 HVPVMVAGMSGVV--SVIAGDHHSMA 712



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 151/309 (48%), Gaps = 36/309 (11%)

Query: 247 WLGLANTTIQPLPK-RVPLEAAIVSL----SVSKCS--EAHVLTVTSEGEVYSWGVGEHG 299
           WLG      Q LP+ R P++    +L    SV++ S  + H + V S+G V++WG    G
Sbjct: 25  WLGCG----QDLPQARAPVDQTRAALAGRASVARLSLGQYHSVGVHSDGSVWAWGFNRQG 80

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQ---VSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +LG+G   +   P  +      K +T    V++G SHS A+  DG ++ WG+   G+LG 
Sbjct: 81  QLGNGLFTNSPTPVKV------KNLTDAVAVASGDSHSLALRSDGTVWAWGDNYSGQLGT 134

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           G       P  V  LS V +V+ G +H+  L  DG TVW+ G     +LG    G  + P
Sbjct: 135 GSTAVSAEPVQVQGLSGVLSVASGFAHSAALRSDG-TVWAWGDNRYRQLGPLTAGSSSVP 193

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLS 470
             +  L    V  V AG + ++AL  DG V+ WG   RS  +   T      P+ V GL+
Sbjct: 194 VQVPGLGG--VIAVAAGGNTTLALRADGTVWAWGDN-RSGQLGDGTVTTRGNPLQVLGLT 250

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
              +V +S G SH +AL      + WG NTMGQ G D  +     P++ VGL DV     
Sbjct: 251 G--VVTLSAGASHCVALRSNGTAWTWGLNTMGQLG-DGTTTQRSVPAQ-VGLTDVMA--A 304

Query: 531 CAGSLFSIA 539
            AG+  S+A
Sbjct: 305 VAGNYHSLA 313



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 161/354 (45%), Gaps = 24/354 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
             V+ WG N   Q+ + +      P ++++L   +  + +G   +  L S G +  +G  
Sbjct: 69  GSVWAWGFNRQGQLGNGLFTNSPTPVKVKNLTDAVA-VASGDSHSLALRSDGTVWAWGDN 127

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG  +T +   P +V   + ++S++      AH   + S+G V++WG   + +LG 
Sbjct: 128 YSGQLGTGSTAVSAEPVQVQGLSGVLSVA---SGFAHSAALRSDGTVWAWGDNRYRQLGP 184

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               S   P  + G L G  V  V+AG + + A+  DG ++ WG+   G+LG G + +R 
Sbjct: 185 LTAGSSSVPVQVPG-LGG--VIAVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRG 241

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P  V  L+ V  +S G SH + L  +G T W+ G   +G+LG   T + + P  +    
Sbjct: 242 NPLQVLGLTGVVTLSAGASHCVALRSNG-TAWTWGLNTMGQLGDGTTTQRSVPAQVGLT- 299

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIVDVSI 479
              V    AG   S+A+  DG V+ WG      L + +++     +  GLS    + +  
Sbjct: 300 --DVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGLSGG--ITLVA 355

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFS---NPVDQPSKVVGLEDVCVRQI 530
           G  H L L     V++WG N  GQ G   +    +PV   +  +G   V   Q+
Sbjct: 356 GFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNPGVASGQL 409



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 18/191 (9%)

Query: 179 GDTDISVAHS---------KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQF 229
           G T I+  HS          V+ WG N   QI          P      S++  I AG +
Sbjct: 549 GVTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNWHILPVQAVGLSSVTAITAGGY 608

Query: 230 CTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLE--AAIVSLSVSKCSEAHVLTVTS 286
            +  L S G +  +G    G L N  +  L    P+     +VS++     + H L + S
Sbjct: 609 HSLALRSDGTVWSWGYNGSGQLGNGALASLNAPGPVSNLTGVVSIA---AGDYHSLALRS 665

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           +G V +WG    G++G G +L+ R   +++ G+ G  V  V AG  HS A+  DG  + W
Sbjct: 666 DGTVRAWGFNFDGQIGDG-SLTNRHVPVMVAGMSG--VVSVIAGDHHSMAMRSDGTTWAW 722

Query: 347 GEGDHGRLGHG 357
           G    G+LG G
Sbjct: 723 GANTEGQLGDG 733


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  133 bits (335), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 145/281 (51%), Gaps = 19/281 (6%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           + +Y  GW     LG  N++    P+  P+EA   + +    C ++H L VT  G+V+SW
Sbjct: 93  MQLYSWGWGDFGRLGHGNSSDVFHPQ--PIEALQGIKIKQIACGDSHCLAVTDAGQVHSW 150

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G  ++G+LG GNT     P+ I     G  V  ++AG  H+AA+ EDG LY WG G +G 
Sbjct: 151 GRNQNGQLGLGNTEDSLLPQKIHA-FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGN 209

Query: 354 LGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG GD   R  P  V+  E   +  V+CG  HT+ +S  G  +++ G    G+LGH D  
Sbjct: 210 LGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSG-DLYTYGWSKYGQLGHGDFE 268

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
               P  +EAL+   + ++  G   ++A+  DG ++ WG      +G+ + ++   +PV 
Sbjct: 269 DHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGV-ADNVDHCSPVQ 327

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           V      ++  V+ G  H LAL++   V++WG  T GQ G 
Sbjct: 328 VIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGH 368



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 17/291 (5%)

Query: 260 KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
           + VP EA   ++++      H + + S   V SWG GE G+LGHG+   +  P L+ G  
Sbjct: 12  EEVP-EAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFD 70

Query: 320 YGKRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGA 376
                + V  G  H+ A +++ + LY+WG GD GRLGHG+      P  +  L    +  
Sbjct: 71  VPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQ 130

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           ++CG+SH L ++  G  V S G    G+LG  +T     P+ I A     V+ + AG   
Sbjct: 131 IACGDSHCLAVTDAGQ-VHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEH 189

Query: 437 SVALTWDGLVFWW--------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
           + A+  DG ++ W        GLG R+  +    P  V+ +   ++V V+ G  H + +S
Sbjct: 190 TAAILEDGDLYGWGWGQYGNLGLGDRNDRL---VPEKVSSVEGEKMVLVACGWRHTVTVS 246

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              ++Y +G +  GQ G  +F + +  P K+  L+D  + QI  G   ++A
Sbjct: 247 SSGDLYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDRFISQIAGGWRHTMA 296



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 16/245 (6%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V++WG N + Q+ L          ++ +     ++ I AG   T  +   G L  YG 
Sbjct: 145 GQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDL--YGW 202

Query: 246 GW-----LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           GW     LGL +   + +P++V  +E   + L    C   H +TV+S G++Y++G  ++G
Sbjct: 203 GWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVA--CGWRHTVTVSSSGDLYTYGWSKYG 260

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHG+      P  +   L  + ++Q++ G  H+ AV  DG LY WG    G++G  D 
Sbjct: 261 QLGHGDFEDHLVPHKLEA-LKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADN 319

Query: 360 KSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
               +P  V   +   V  V+CG  HTL L+++   V+S G G  G+LGH +     TPK
Sbjct: 320 VDHCSPVQVIFPDEQKVAQVACGWRHTLALTEN-KNVFSWGRGTSGQLGHGEIIDRNTPK 378

Query: 418 VIEAL 422
           +I+AL
Sbjct: 379 MIDAL 383


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  133 bits (335), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 157/342 (45%), Gaps = 24/342 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++ HI  G     L+   G +  +G+   G LG         P+ +   AA  S+    C
Sbjct: 273 DVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSIDFVAC 331

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  GE+Y+WG G H  G LGHG  +S   PK I G L G ++  VS G  H+
Sbjct: 332 GEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHT 391

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQ--- 389
           A +T  G L+T+G+G  G LGHGD ++   P  V  LS +   AV+CG  H   + +   
Sbjct: 392 ALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIV 451

Query: 390 -------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                      +++ G G+  +LGH D      P  + AL      +V  G S +V LT 
Sbjct: 452 THSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTT 511

Query: 443 DGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G      L + +     P LV   L+   + +++ G  HV  L+  NEV+ WG
Sbjct: 512 SGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWG 571

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               G+ G  +  +    P+ V  L++  V+ I  GS F+ A
Sbjct: 572 KGANGRLGHGDVED-RKAPTLVDALKERHVKNIACGSNFTAA 612



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 159/378 (42%), Gaps = 95/378 (25%)

Query: 147 ADDNIKPLGDR------KSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWG----CN 196
           AD NI  LG R      K   SN  +D      +   +    +     +V+TWG      
Sbjct: 247 ADKNIGYLGSRSDVLIPKPLESNVVLD---VHHIACGVKHAALVSRQGEVFTWGEASGGR 303

Query: 197 LHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLG 249
           L H +  +V G    P+L +SL + +I  +  G+F T  +  TG +  +G G      LG
Sbjct: 304 LGHGMGKDVTG----PQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLG 359

Query: 250 LANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
                   +PKR+  PLE   ++ SVS C   H   +TS G+++++G G  G LGHG+  
Sbjct: 360 HGTDVSHWIPKRISGPLEGLQIA-SVS-CGPWHTALITSTGQLFTFGDGTFGVLGHGDKE 417

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTWGEGDHGRLGH 356
           +   P+ +   L G R   V+ G  H+AA+ E            G L+TWG+GD  RLGH
Sbjct: 418 TVFYPREVES-LSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGH 476

Query: 357 GDLKSRHTP------------------TLVTELSDVGAV--------------------- 377
           GD + R  P                  +L   L+  G V                     
Sbjct: 477 GDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLP 536

Query: 378 ---------------SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
                          +CG  H  VL+   + V++ G G  G+LGH D      P +++AL
Sbjct: 537 CLVEDKLTKDCVEEIACGAYHVAVLTSR-NEVFTWGKGANGRLGHGDVEDRKAPTLVDAL 595

Query: 423 RKFRVRKVCAGTSFSVAL 440
           ++  V+ +  G++F+ A+
Sbjct: 596 KERHVKNIACGSNFTAAI 613


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  133 bits (335), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 162/345 (46%), Gaps = 53/345 (15%)

Query: 249  GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTL 307
            GL       LPKRV        + + +C   H + V S   VYSWG  + G+LGHG   +
Sbjct: 1157 GLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAV 1216

Query: 308  SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +Q RPK+I   L G+++  ++AG +H+  + + G L+++G GD G+LG G   S++ PT 
Sbjct: 1217 NQSRPKVIE-ELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTR 1275

Query: 368  VTELSDVGA-----------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            +   + +G            ++CG  H+++ S++G  V+S G G  G+LGH+    ++ P
Sbjct: 1276 IEINAIMGGLQHHDGGKITQIACGFGHSVICSENGE-VYSWGLGKQGQLGHKVFENISKP 1334

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSS 471
            ++IE LR   V K+  G   +VA T    V+ WG G       SS      P +V     
Sbjct: 1335 RLIETLRG--VTKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQ 1392

Query: 472  HQIVDVSIGDSHVLALS---------QYNE------------VYAWGSNTMGQCGQDN-- 508
              +  V  G +H + ++         Q +E            +YAWGS   G+ G     
Sbjct: 1393 KNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDL 1452

Query: 509  ----FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
                F  P+  P+ + G+  + +  I  GS FS   T   SN+A+
Sbjct: 1453 KSPFFDKPI--PTAIKGVNSLNLIDISCGSDFSAMIT---SNNAI 1492



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 44/304 (14%)

Query: 190  VYTWGCNLHHQILDEVRG-KCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
            VY+WG +   Q+    +    SRP++  +     I+ I AG     +L  +G L  +G G
Sbjct: 1198 VYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYG 1257

Query: 247  ---WLGLANTTIQPLPKRVPLEAAIVSL--------SVSKCSEAHVLTVTSEGEVYSWGV 295
                LG  +   + +P R+ + A +  L        +   C   H +  +  GEVYSWG+
Sbjct: 1258 DFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGL 1317

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            G+ G+LGH    +  +P+LI   L G  VT++S GH H+ A T+   +Y+WG G+H +LG
Sbjct: 1318 GKQGQLGHKVFENISKPRLIET-LRG--VTKISCGHFHTVATTDLKNVYSWGSGEHMKLG 1374

Query: 356  HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLS---------QDGHT----------- 393
            H   K    P +V      +V  V CG++HT+ ++         QD              
Sbjct: 1375 HSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSP 1434

Query: 394  VWSMGSGNLGKLGHEDTGKVT-----TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            +++ GS   GKLG     K        P  I+ +    +  +  G+ FS  +T +  ++ 
Sbjct: 1435 IYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAIYV 1494

Query: 449  WGLG 452
            WG G
Sbjct: 1495 WGCG 1498



 Score = 76.3 bits (186), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 92/222 (41%), Gaps = 33/222 (14%)

Query: 178  IGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDST 237
             G + I   + +VY+WG     Q+  +V    S+PRL      +  I  G F T      
Sbjct: 1300 FGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKISCGHFHTVATTDL 1359

Query: 238  GGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVT------- 285
              +  +G G    LG ++   + +PK V      +  +VSK  C + H +T+T       
Sbjct: 1360 KNVYSWGSGEHMKLGHSSDKDESVPKVVDF---FIQKNVSKVVCGQNHTMTITFPDDLNN 1416

Query: 286  --------------SEGEVYSWGVGEHGKLGHGNTLSQ---RRP-KLIMGGLYGKRVTQV 327
                          S   +Y+WG  EHGKLG G  L      +P    + G+    +  +
Sbjct: 1417 SNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDI 1476

Query: 328  SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
            S G   SA +T +  +Y WG G  G++G+G       PT ++
Sbjct: 1477 SCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRIS 1518


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  133 bits (335), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 90/283 (31%), Positives = 135/283 (47%), Gaps = 13/283 (4%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           EA ++ +S   C  +H + +   G V SWG GE G+LGHG       P  I   L    V
Sbjct: 9   EARVLGVS---CGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCI-AALTDAGV 64

Query: 325 TQVSAGHSHSAAV-TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE 381
             V  G  ++ AV +  G +Y+WG GD GRLGHG+      P  +   S   V  V+CG+
Sbjct: 65  DAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGD 124

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           +HTLV++Q    +++ G    G+LG   T    +P+++ AL+  RV  V  G+  S+A T
Sbjct: 125 THTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAAT 184

Query: 442 WDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G VF WG G   +     S   +TP  V GL    +  V  G  H   ++    V+ +
Sbjct: 185 EAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTF 244

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G +  GQ G  +  +   +P  V GL+   V  +  G   ++A
Sbjct: 245 GWSKYGQLGHGDHVDHT-RPCLVAGLQHCRVSTVAGGWRHTMA 286



 Score =  133 bits (334), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 84/252 (33%), Positives = 129/252 (51%), Gaps = 24/252 (9%)

Query: 276 CSEAHVLTVTS-EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C + H L VT  +G +Y++G  ++G+LG G+T     P+L+   L G+RV+ V+ G  HS
Sbjct: 122 CGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTA-LQGERVSSVACGSEHS 180

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGH 392
            A TE G +++WG G +G LG GD + R+TPT V  L  V   S  CG  H+ V++ +G 
Sbjct: 181 LAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGR 240

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
            V++ G    G+LGH D    T P ++  L+  RV  V  G   ++A   +G ++ WG  
Sbjct: 241 -VFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWN 299

Query: 451 ----LGLRSSSISFHTPVLVTGL------------SSHQIVDVSIGDSHVLALSQYNEVY 494
               LGL  S      P  V G             +  ++  ++ G  H +A+++  EVY
Sbjct: 300 KFGQLGLGDSE-DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVY 358

Query: 495 AWGSNTMGQCGQ 506
           +WG    GQ G 
Sbjct: 359 SWGRGVNGQLGH 370



 Score =  128 bits (322), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 13/255 (5%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           +E  V   +S G++YSWG G+ G+LGHG       P+ I     G+ V +V+ G +H+  
Sbjct: 71  AEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPI-AFFSGRPVARVACGDTHTLV 129

Query: 337 VTE-DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           VT+ DG LYT+G   +G+LG G      +P LVT L    V +V+CG  H+L  ++ G T
Sbjct: 130 VTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAG-T 188

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V+S G G  G LG  D+    TP  +  L    V  V  G   S  +T +G VF +G   
Sbjct: 189 VFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSK 248

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
              LG     +    P LV GL   ++  V+ G  H +A      +YAWG N  GQ G  
Sbjct: 249 YGQLG-HGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLG 307

Query: 508 NFSNPVDQPSKVVGL 522
           + S     P+ V G 
Sbjct: 308 D-SEDRAAPTPVAGF 321



 Score = 97.1 bits (240), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 115/252 (45%), Gaps = 27/252 (10%)

Query: 179 GDTD---ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLD 235
           GDT    ++     +YT+G N + Q+       C  P+L +     R           L 
Sbjct: 123 GDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLA 182

Query: 236 STGGLLVYGKGW-----LGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGE 289
           +T    V+  GW     LG  ++  +  P RV  L+   V+  V  C   H   VT EG 
Sbjct: 183 ATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVV--CGWRHSAVVTDEGR 240

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V+++G  ++G+LGHG+ +   RP L+  GL   RV+ V+ G  H+ A   +G LY WG  
Sbjct: 241 VFTFGWSKYGQLGHGDHVDHTRPCLV-AGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWN 299

Query: 350 DHGRLGHGDLKSRHTPTLVTELSD--------------VGAVSCGESHTLVLSQDGHTVW 395
             G+LG GD + R  PT V                   V  ++CG  HT+ +++ G  V+
Sbjct: 300 KFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGE-VY 358

Query: 396 SMGSGNLGKLGH 407
           S G G  G+LGH
Sbjct: 359 SWGRGVNGQLGH 370



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 9/179 (5%)

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
           E + V  VSCG SH++ L   G  V S G G  G+LGH    + T+P  I AL    V  
Sbjct: 8   EEARVLGVSCGSSHSIALLDCG-VVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDA 66

Query: 430 VCAGTSFSVAL-TWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
           V  G  ++VA+ +  G ++ WG G               P  +   S   +  V+ GD+H
Sbjct: 67  VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTH 126

Query: 484 VLALSQYN-EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            L ++Q +  +Y +G N  GQ G  + +N    P  V  L+   V  +  GS  S+A T
Sbjct: 127 TLVVTQGDGALYTFGRNQNGQLGLGH-TNDCLSPQLVTALQGERVSSVACGSEHSLAAT 184



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 11/89 (12%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-----------GLYGKRVTQVS 328
           H +   SEG +Y+WG  + G+LG G++  +  P  + G               +RV  ++
Sbjct: 283 HTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLA 342

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G  H+ AVTE G +Y+WG G +G+LGHG
Sbjct: 343 CGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371



 Score = 47.4 bits (111), Expect = 0.082,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 26/170 (15%)

Query: 156 DRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQ 215
           DR +      +D  +   +      + +     +V+T+G + + Q+        +RP L 
Sbjct: 207 DRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLV 266

Query: 216 SLPSNIR--HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-------- 262
           +   + R   +  G   T   DS G L  +G    G LGL ++  +  P  V        
Sbjct: 267 AGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGG 326

Query: 263 --------PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
                   P   A+++     C   H + VT  GEVYSWG G +G+LGHG
Sbjct: 327 GVEAGAATPRRVALLA-----CGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  133 bits (335), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 103/324 (31%), Positives = 168/324 (51%), Gaps = 42/324 (12%)

Query: 243 YGK-GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           YG  G LGLAN   Q  P+ V   +    + V K +++  + ++ +G+VY+WG  + G L
Sbjct: 50  YGNFGQLGLANENNQYSPQEVEKLSDRNIIKV-KANKSVSMALSQDGKVYTWGKNKGGIL 108

Query: 302 GHGN--TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           GH +  + +  +P+L+   L   ++ Q+S G  H AA+++DG LYTWG  DHG+LGH ++
Sbjct: 109 GHYDITSFNMIQPELVEK-LENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGH-EI 166

Query: 360 KSRHT-------------------PTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMG 398
           + +                     PT V  L+ +    VSCG   T+VL+++G  V+S G
Sbjct: 167 QQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGE-VYSFG 225

Query: 399 SGNLGKLGH--EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
           +   G+LG+  E+TG    PK I  L+   +  +  G  FS A++  G V+ WG      
Sbjct: 226 NSMKGQLGYQSEETGNF-QPKKIPDLQN--IINIDCGQQFSAAVSSSGKVYTWGNNDHGQ 282

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           LG  + SI    P  VTG   ++I+++S GD+ + ALS   +++ WG    GQ G  N  
Sbjct: 283 LG-NNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSN-R 340

Query: 511 NPVDQPSKVVGLEDVCVRQICAGS 534
           N +  P ++   E + ++  C G+
Sbjct: 341 NDLYAPKQIEFKEKI-IKVDCGGT 363



 Score =  129 bits (324), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 81/283 (28%), Positives = 143/283 (50%), Gaps = 36/283 (12%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQS------------LPSNIRHIEA---------G 227
           ++YTWG   H ++  E++ K ++  ++             LP+ ++ +           G
Sbjct: 150 ELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGG 209

Query: 228 QFCTFLLDSTGGLLVYG---KGWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT 283
           QF T +L   G +  +G   KG LG  +  T    PK++P    I+++    C +     
Sbjct: 210 QF-TVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINID---CGQQFSAA 265

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V+S G+VY+WG  +HG+LG+  ++ Q RP  + G   G ++  +S G +  AA++ +G L
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTG-FGGNKIINISCGDNFIAALSNEGKL 324

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           +TWG G+ G+LGH +    + P  +     +  V CG +HT  L+Q+   ++  G GN G
Sbjct: 325 FTWGYGNDGQLGHSNRNDLYAPKQIEFKEKIIKVDCGGTHTAFLTQNNQ-LYLFGRGNEG 383

Query: 404 KLG-----HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           +LG       +    TTPK++E  +K +V  V  G  +++A+T
Sbjct: 384 QLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426



 Score =  119 bits (297), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 87/280 (31%), Positives = 138/280 (49%), Gaps = 33/280 (11%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           VY+WG G  G+LG  N  +Q  P+ +   L  + + +V A  S S A+++DG +YTWG+ 
Sbjct: 45  VYAWGYGNFGQLGLANENNQYSPQEVE-KLSDRNIIKVKANKSVSMALSQDGKVYTWGKN 103

Query: 350 DHGRLGHGDLKSRHT--PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             G LGH D+ S +   P LV +L +  +  +SCG  H   +SQDG  +++ G+ + GKL
Sbjct: 104 KGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGE-LYTWGNKDHGKL 162

Query: 406 GHE---DTGKVTT---------------PKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           GHE    + KV                 P  +++L   + ++V  G  F+V LT +G V+
Sbjct: 163 GHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVY 222

Query: 448 WWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            +G      LG +S       P  +  L +  I+++  G     A+S   +VY WG+N  
Sbjct: 223 SFGNSMKGQLGYQSEETGNFQPKKIPDLQN--IINIDCGQQFSAAVSSSGKVYTWGNNDH 280

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           GQ G +N S    +P++V G     +  I  G  F  A +
Sbjct: 281 GQLG-NNQSIYQARPNQVTGFGGNKIINISCGDNFIAALS 319



 Score =  107 bits (266), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 102/382 (26%), Positives = 164/382 (42%), Gaps = 58/382 (15%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS---KVYTWGCN----LHHQILDEVR 206
           L +  +  S  +++  S   +     +  +S+A S   KVYTWG N    L H   D   
Sbjct: 58  LANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGH--YDITS 115

Query: 207 GKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP- 263
               +P L     N  I+ I  G F    +   G L  +G    G     IQ    +V  
Sbjct: 116 FNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEI 175

Query: 264 --------------LEAAIVSLSVSKCSEAH-----VLTVTSEGEVYSWGVGEHGKLGH- 303
                         L   + SL+  KC +        + +T  GEVYS+G    G+LG+ 
Sbjct: 176 KRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQ 235

Query: 304 ----GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
               GN   ++ P L       + +  +  G   SAAV+  G +YTWG  DHG+LG+   
Sbjct: 236 SEETGNFQPKKIPDL-------QNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQS 288

Query: 360 KSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
             +  P  VT    + +  +SCG++    LS +G  +++ G GN G+LGH +   +  PK
Sbjct: 289 IYQARPNQVTGFGGNKIINISCGDNFIAALSNEG-KLFTWGYGNDGQLGHSNRNDLYAPK 347

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----------LRSSSISFHTPVLVT 467
            IE   K ++ KV  G + +  LT +  ++ +G G          + S +    TP +V 
Sbjct: 348 QIEF--KEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVE 405

Query: 468 GLSSHQIVDVSIGDSHVLALSQ 489
                ++VDV+ G  + LA+++
Sbjct: 406 FFKKMKVVDVTCGGEYTLAITE 427



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TV++ G GN G+LG  +     +P+ +E L    + KV A  S S+AL+ DG V+ WG  
Sbjct: 44  TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKN 103

Query: 451 ----LGLRS-SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
               LG    +S +   P LV  L + QI  +S G  H+ A+SQ  E+Y WG+   G+ G
Sbjct: 104 KGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLG 163

Query: 506 QD--NFSNPVD---------------QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +    SN V+                P+KV  L  +  +Q+  G  F++  T
Sbjct: 164 HEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT 216


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 140/265 (52%), Gaps = 18/265 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           ++ WG   HG+LG G    +    PK  +     K V + + G +H+  +T+DG +Y+ G
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPK-ALDWFEAKSVMKAALGANHTLFLTKDGKVYSCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D+G+LGH   + R  P LV+ L    +  V+CGE H+L LS+ G  V+S GS N G+L
Sbjct: 60  SNDYGQLGHDQPRKR--PQLVSGLDAYSIINVACGEMHSLALSRWGE-VFSWGSDNYGQL 116

Query: 406 GHEDTGKV-TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           GH+  G +   PK+I++L K++V ++ AG   SVALT  G +F WG      LGL + + 
Sbjct: 117 GHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITP 176

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSNPVDQPS 517
              TP  V  LS      ++ G +H  A+S+   V+ WG N  GQ G  D  S     P+
Sbjct: 177 YESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKF--PT 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYTV 542
           ++  L +  VR I  G  FS   T+
Sbjct: 235 QLRTLRNSRVRFISCGDEFSTFLTL 259



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 14/263 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYG 244
            KVY+ G N + Q+  D+ R    RP+L S     +I ++  G+  +  L   G +  +G
Sbjct: 53  GKVYSCGSNDYGQLGHDQPR---KRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109

Query: 245 K---GWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
               G LG     T+Q +PK +   A    + ++   + H + +T+ GE++ WG  + G+
Sbjct: 110 SDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIA-AGQRHSVALTNAGEIFVWGANDFGQ 168

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G           +  L G     ++ G +H+ AV++ G ++ WG+  +G+LG  D  
Sbjct: 169 LGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTV 228

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
           S+  PT +  L  S V  +SCG+  +  L+ DG  V+S G+G  G+LGH  T     P+ 
Sbjct: 229 SKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDG-GVFSCGAGMYGQLGHGGTSNEILPRQ 287

Query: 419 IEALRKFRVRKVCAGTSFSVALT 441
           +  L    + ++  G   S+A  
Sbjct: 288 VLELMGSTITQISCGRQHSLAFV 310


>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 161/315 (51%), Gaps = 23/315 (7%)

Query: 246 GWLGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG      + LP+   +P  ++   +S+  C  AHVL +T++G+V +WG G  G+LGH
Sbjct: 31  GQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGTSGQLGH 90

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+ +S  +PK +   L    +T VSAG SHS  V++ G L+T G+G  G+LGHGD KS  
Sbjct: 91  GDMVSSLQPKHVKL-LESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDCKSHC 149

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQD----GHTVWSMGSGNLGKLG--HEDTGKVTT 415
           +P  V+      V  ++CG  H+LVL +     G  V+  GSG  G+LG   ++T  ++ 
Sbjct: 150 SPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGKRGQLGVSMDNTRSISV 209

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIV 475
           P+    L    +  + A    S AL+ +G ++ WG G  S+S   H P  +   SS    
Sbjct: 210 PQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRGFGSTS-DVHCPRCLP--SSLCFT 266

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS---------KVVGLEDVC 526
            V++G +H+L L+   EV+  G N  G  G     + V   S         KV GL+ + 
Sbjct: 267 QVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSEESREENLEKVQGLDGLN 326

Query: 527 VRQICAGSLFSIAYT 541
           V QI AG+  S   T
Sbjct: 327 VVQIAAGAEHSALVT 341



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 16/145 (11%)

Query: 234 LDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           L + G L  +G+G     +T+    P+ +P       +++      H+L +T  GEV+  
Sbjct: 234 LSANGHLYTWGRG---FGSTSDVHCPRCLPSSLCFTQVALGW---NHMLVLTGGGEVFML 287

Query: 294 GVGEHGKLGHGNTLSQ--------RRPKL-IMGGLYGKRVTQVSAGHSHSAAVTEDGL-L 343
           G   HG LG     SQ        R   L  + GL G  V Q++AG  HSA VT + L +
Sbjct: 288 GGNRHGVLGDPQKGSQVKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVTGNILVI 347

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLV 368
            TWG G+HG+LG G+   + +P  V
Sbjct: 348 KTWGWGEHGQLGLGNTYDQISPQAV 372


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 154/318 (48%), Gaps = 18/318 (5%)

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G L +G+  LG        LP+ +     +  + ++ C   H L V  +G V S G  ++
Sbjct: 15  GSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIA-CGLQHTLFVKKDGRVLSCGNNDY 73

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LGH      +RP LI   L  + V Q S+G  HS  +T+ G ++TWG  +  +LG G 
Sbjct: 74  GQLGHEKPC--KRPALI-DSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ 130

Query: 359 LKSRHT--PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           + S  T  P +V  L+D  V  V+CG +HT+ L+  G  +++ GS N G+LG  +     
Sbjct: 131 VDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQ-IYTWGSNNHGQLGLANKTPQN 189

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
            P+ +  +    + +V AG   ++ LT  G +F WG      LG+         P LV  
Sbjct: 190 EPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQ-DRGAPTLVKT 248

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L +  I  ++ GD H LAL++   V+ +G+   GQ G  N SN    P KV  L    V 
Sbjct: 249 LRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGH-NTSNNELLPRKVFELMGSSVT 307

Query: 529 QICAGSLFSIAYTVPPSN 546
           QI  G   SIAY VP S 
Sbjct: 308 QIACGRKHSIAY-VPSSG 324



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 162/363 (44%), Gaps = 33/363 (9%)

Query: 181 TDISVAHSKVYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDS 236
           T+ +   S V  WG   H Q+    L+E      R         + HI  G   T  +  
Sbjct: 2   TETADLKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKK 61

Query: 237 TGGLLVYGK---GWLGLANTTIQP-----LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
            G +L  G    G LG      +P     L +R  L+A+            H   +T  G
Sbjct: 62  DGRVLSCGNNDYGQLGHEKPCKRPALIDSLGERNVLQAS--------SGTKHSTVLTDAG 113

Query: 289 EVYSWGVGEHGKLGHG--NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           +V++WG  E  +LG G  ++ S   P+++ G L   +V QV+ G +H+  +T  G +YTW
Sbjct: 114 QVFTWGSNEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQVACGSAHTVGLTATGQIYTW 172

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G  +HG+LG  +   ++ P  V+ +S   +  V+ G  H LVL+  G  +++ G  + G+
Sbjct: 173 GSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISG-ALFAWGCNSFGQ 231

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSIS 459
           LG  D      P +++ LR   +  +  G   S+ALT DG VF +G G+      ++S +
Sbjct: 232 LGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNN 291

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
              P  V  L    +  ++ G  H +A +     VY +G    GQ G  +  N +  P+ 
Sbjct: 292 ELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRM-SPAM 350

Query: 519 VVG 521
           V G
Sbjct: 351 VKG 353



 Score =  105 bits (261), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           WG   HG+LG G L+   T TL  E+      +V  ++CG  HTL + +DG  V S G+ 
Sbjct: 14  WGSLTHGQLGLGGLEEE-TVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGR-VLSCGNN 71

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL- 453
           + G+LGHE   K   P +I++L +  V +  +GT  S  LT  G VF WG      LG  
Sbjct: 72  DYGQLGHEKPCK--RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG 129

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
           +  S S   P +V GL+ H++V V+ G +H + L+   ++Y WGSN  GQ G  N   P 
Sbjct: 130 QVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLAN-KTPQ 188

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           ++P  V  +  + + ++ AG+  ++  T+
Sbjct: 189 NEPQWVSCISGLPIVRVAAGADHNLVLTI 217



 Score = 53.9 bits (128), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 13/152 (8%)

Query: 190 VYTWGCNLHHQIL---DEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
           ++ WGCN   Q+    D+ RG    P L     N  I  +  G   +  L   GG+  +G
Sbjct: 221 LFAWGCNSFGQLGVGDDQDRGA---PTLVKTLRNQGICALACGDDHSLALTRDGGVFTFG 277

Query: 245 KGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAH-VLTVTSEGEVYSWGVGEHGKL 301
            G  G    NT+   L  R   E    S++   C   H +  V S G VY +G+G +G+L
Sbjct: 278 AGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQL 337

Query: 302 GHGNTLSQRRPKLIMGGL--YGKRVTQVSAGH 331
           G G+T+++  P ++ G    +G  V    A H
Sbjct: 338 GTGSTVNRMSPAMVKGPFVAFGAEVVDKGAIH 369


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score =  133 bits (334), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 100/321 (31%), Positives = 156/321 (48%), Gaps = 29/321 (9%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLS 272
           S PS +   E       LLD+ G +  +G  W   LG  +   Q +PKRVP+       S
Sbjct: 39  SQPSVVDVAEGHGLSVALLDN-GTVWTWGHSWHGGLGYESVQDQYVPKRVPIYNVT---S 94

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           V  C  A V  +  +G V++WG  E+G+LG G T+    P ++ GGL    V  V+ G S
Sbjct: 95  VDSCF-ASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMV-GGL--GNVRAVAVGIS 150

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           H  A+  DG ++ WG+ + G+LG G      TP  V+ L  + A+S G +H L +   G+
Sbjct: 151 HMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLPRIVAISAGYNHNLAIDDAGN 210

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            VW+ G  + G+LG         PK ++ L    V  V  G+SFS+AL  DG ++ WG  
Sbjct: 211 -VWTWGLNDCGQLGDGTNISSPNPKKVKGLAN--VTAVAGGSSFSLALKDDGTIWAWGSN 267

Query: 453 LR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC--- 504
           ++      ++     PV V GL++  ++ ++ G     A++    ++ WG N  G+    
Sbjct: 268 VQGELGVGTTKDCPLPVKVQGLTN--VIRIAAGGETSAAITNDGSLWVWGHNEQGKYISG 325

Query: 505 GQDNFSNPVDQPSKVVGLEDV 525
           G+D  S     P +  GL +V
Sbjct: 326 GEDASS-----PRRASGLSNV 341



 Score =  127 bits (320), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 97/277 (35%), Positives = 140/277 (50%), Gaps = 19/277 (6%)

Query: 272 SVSKCSEAHVLTVT--SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
           SV   +E H L+V     G V++WG   HG LG+ +   Q  PK +   +Y   VT V +
Sbjct: 42  SVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRV--PIYN--VTSVDS 97

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQ 389
             +  AA+ +DG ++TWG  ++G+LG G     +TP +V  L +V AV+ G SH L L  
Sbjct: 98  CFASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGLGNVRAVAVGISHMLALGN 157

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           DG TVW+ G  N G+LG        TP  +  L   R+  + AG + ++A+   G V+ W
Sbjct: 158 DG-TVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP--RIVAISAGYNHNLAIDDAGNVWTW 214

Query: 450 GLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
           GL         ++IS   P  V GL++  +  V+ G S  LAL     ++AWGSN  G+ 
Sbjct: 215 GLNDCGQLGDGTNISSPNPKKVKGLAN--VTAVAGGSSFSLALKDDGTIWAWGSNVQGEL 272

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           G    +     P KV GL +V   +I AG   S A T
Sbjct: 273 GVGT-TKDCPLPVKVQGLTNVI--RIAAGGETSAAIT 306



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 87/289 (30%), Positives = 129/289 (44%), Gaps = 26/289 (8%)

Query: 176 YNIGDTD---ISVAHSK----VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQ 228
           YN+   D    SVA  K    V+TWG N + Q+ D      + P +     N+R +  G 
Sbjct: 90  YNVTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGLGNVRAVAVGI 149

Query: 229 FCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT 285
                L + G +  +GK   G LG         P RV     IV++S       H L + 
Sbjct: 150 SHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLPRIVAISAGY---NHNLAID 206

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
             G V++WG+ + G+LG G  +S   PK + G      VT V+ G S S A+ +DG ++ 
Sbjct: 207 DAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGL---ANVTAVAGGSSFSLALKDDGTIWA 263

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG    G LG G  K    P  V  L++V  ++ G   +  ++ DG ++W  G    GK 
Sbjct: 264 WGSNVQGELGVGTTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDG-SLWVWGHNEQGKY 322

Query: 406 --GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
             G ED    ++P+    L    V+ V  GT   +AL  DG +  W +G
Sbjct: 323 ISGGEDA---SSPRRASGLSN--VKLVDIGTINIIALENDGSL--WVVG 364



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 25/239 (10%)

Query: 149 DNIKPLGDRKSSNSNTDIDSTSTPKLT-------YNIGDTDISVAHSKVYTWGCNLHHQI 201
           +N   LGD  + +S T +  +  P++        +N+   D       V+TWG N   Q+
Sbjct: 167 NNCGQLGDGTNVDSMTPVRVSGLPRIVAISAGYNHNLAIDDAG----NVWTWGLNDCGQL 222

Query: 202 LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPL 258
            D        P+     +N+  +  G   +  L   G +  +G   +G LG+  T   PL
Sbjct: 223 GDGTNISSPNPKKVKGLANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPL 282

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL--GHGNTLSQRRPKLIM 316
           P +V     ++ ++    + A    +T++G ++ WG  E GK   G  +  S RR     
Sbjct: 283 PVKVQGLTNVIRIAAGGETSA---AITNDGSLWVWGHNEQGKYISGGEDASSPRRAS--- 336

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
            GL    V  V  G  +  A+  DG L+  G+   G+LG G+   R+ P  V   S+VG
Sbjct: 337 -GL--SNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAIGSNVG 392


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 176/380 (46%), Gaps = 38/380 (10%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVS 270
           +Q +   +RHI        L+   G +  +G+   G LG         P  V    A+  
Sbjct: 268 VQQIACGVRHIA-------LVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEF-LAVSH 319

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +    C E H   +TS  ++Y+WG G    G LGHG  +S   PK ++G L G +V  V+
Sbjct: 320 VDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVA 379

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL- 385
            G  HSA  T +G LYT+G+G +G LGHGD +S   P  V  LS +    V+CG  HT  
Sbjct: 380 CGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAA 439

Query: 386 ---VLSQDG-----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
              V+SQ G       +++ G G+  +LGH +      P  + +L  +   ++  G + +
Sbjct: 440 IVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMT 499

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQY 490
           VALT  G VF  G      LG  SS      P LV   L    + ++S G  H + L+  
Sbjct: 500 VALTTSGHVFTMGGTAYGQLGNPSSDGVI--PCLVQDRLVGEFVEEISCGAYHTVVLTSR 557

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
           NEV++WG  + G+ G  +  +    P+ +  L+D  V+ I  GS F+ +  +   +  +S
Sbjct: 558 NEVFSWGRGSNGRLGHGDVED-RKAPTLIEALKDRHVKSISCGSNFTASICI---HKWVS 613

Query: 551 SAFTPLCVDVRPHTFTLIRE 570
            A   +C   R   F   R+
Sbjct: 614 GADQSVCTGCR-QAFGFTRK 632


>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
 gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
          Length = 753

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 172/345 (49%), Gaps = 34/345 (9%)

Query: 208 KCSRPRLQSLPSNIRHIE--AGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV 262
           +C R R  ++    + +    GQ  T ++ ++G +  +GK   G LG  +  I+   K +
Sbjct: 17  QCGRKREGTVEVQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDL-IEEEGKSM 75

Query: 263 PLEAAIVSLSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           P    I+ +   K     C   H L +  +G VYSWG  E+G+LG G+T    RP + + 
Sbjct: 76  PFRVEILHMHRIKVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRP-VYVT 133

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
            L  K+   V  GH HS A++ D  +Y+WG G HG+LG   ++    P+ VT LS   V 
Sbjct: 134 ELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVT 193

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            ++ G SHT VL+ +G  V++ G G  G+LG   T K T P++++AL K R+  +C G+ 
Sbjct: 194 QLAAGYSHTAVLTTEG-KVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSF 252

Query: 436 FSVALTWDGLVFWWGLGLRSSS-ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
            +VA++ +  +F WG   RS     FH               +  G+ H LA+++  +V+
Sbjct: 253 ETVAVSSEQKLFNWG---RSPHYFRFHM--------------IHCGNWHYLAVTEARQVF 295

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            WG N  GQ G     + +  P+ V  L +  V     G+ FS+A
Sbjct: 296 TWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEFSVA 340



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 153/378 (40%), Gaps = 57/378 (15%)

Query: 181 TDISVAHSKVYTWGCN----LHHQILDEVRGKC----------SRPRLQSLPSNIRHIEA 226
           T +  A   VYTWG +    L H  L E  GK            R ++ S+   I H  A
Sbjct: 42  TAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLA 101

Query: 227 GQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT 283
              C        G+  +G    G LG  +T     P  V   +    ++V  C   H L 
Sbjct: 102 --LCR------DGVYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVV-CGHYHSLA 152

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           ++++ +VYSWG G HG+LG  +      P  +   L G  VTQ++AG+SH+A +T +G +
Sbjct: 153 LSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTS-LSGAFVTQLAAGYSHTAVLTTEGKV 211

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           YT+G G +G+LG G    +  P LV  L    +  + CG   T+ +S +          N
Sbjct: 212 YTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLF------N 265

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
            G+  H                 FR   +  G    +A+T    VF WG      LG  +
Sbjct: 266 WGRSPH----------------YFRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHST 309

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
           S      P +V  L+   +   S+G    +A+    +V+ WG +  GQ    +     D 
Sbjct: 310 SMDHLLFPTVVQKLNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQSLHSSSEEIYDV 369

Query: 516 PSKVVGLEDVCVRQICAG 533
             K+  L     R +  G
Sbjct: 370 DWKLPDLSHFSGRSVTYG 387


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 23/322 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK--LGHGNTLSQRRPKLIMGGLYGKRV 324
           AI +++   C E H   V++ G++++WG G HG   LGHG  +S   PK + G L G +V
Sbjct: 311 AITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQV 370

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGES 382
             V+ G  HSA  T +G L+T+G+G  G LGHG+  S   P  V  LS   A  V+CG  
Sbjct: 371 VAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVW 430

Query: 383 HTLVL---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           H+  +               +++ G G+  +LGH +      P  + A+ ++   +V  G
Sbjct: 431 HSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACG 490

Query: 434 TSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            + +VALT  G VF  G      L + +     P+LV   L    + ++S G +HV  L+
Sbjct: 491 YTMTVALTASGHVFSMGGTTYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLT 550

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             +E+Y WG    G+ G  + ++    P+ V  L+D  V+ I  GS F+    +   +  
Sbjct: 551 SRSELYTWGRGANGRLGHGD-TDDKKSPTLVEALKDRHVKNISCGSTFTSCICL---HKW 606

Query: 549 LSSAFTPLCVDVR-PHTFTLIR 569
           +S     +C D R P  FT  R
Sbjct: 607 VSGVDQSVCSDCRQPFGFTRKR 628



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 184/417 (44%), Gaps = 48/417 (11%)

Query: 130 VDLIRSACLVYLILVTLADDN-IKPLGDRKSSNSNTDIDSTSTPKL--------TYNIGD 180
           +D I S   VY+     AD N    LG +  +   TD+    TPK          + IG 
Sbjct: 212 LDDIESLGDVYIWGEVWADGNSFDGLGSQLQAFCKTDV---LTPKPLESDVVLDVHQIGP 268

Query: 181 TDISVA----HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLL 234
            D  +A      +V+TWG +   ++         RP L +SL  +N+  +  G++ +  +
Sbjct: 269 GDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAV 328

Query: 235 DSTGGLLVYGKG-----WLGLANTTIQPLPKRV--PLEA-AIVSLSVSKCSEAHVLTVTS 286
            ++G L  +G G      LG        +PKRV  PLE   +V+++   C   H    TS
Sbjct: 329 STSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVA---CGTWHSALATS 385

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------- 339
            G+++++G G  G LGHGN  S   PK +   L G +  +V+ G  HSAA+ +       
Sbjct: 386 NGKLFTFGDGRFGVLGHGNRASVAYPKEVQ-LLSGYKAIKVACGVWHSAAIIDVMDLSGS 444

Query: 340 ---DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
                 L+TWG+GD  RLGH + ++   PT V  +++     V+CG + T+ L+  GH V
Sbjct: 445 KASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALTASGH-V 503

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           +SMG    G+LG+ ++       V + L    V ++  G +    LT    ++ WG G  
Sbjct: 504 FSMGGTTYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGAN 563

Query: 455 -----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                  +    +P LV  L    + ++S G +    +  +  V     +    C Q
Sbjct: 564 GRLGHGDTDDKKSPTLVEALKDRHVKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQ 620



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 101/238 (42%), Gaps = 20/238 (8%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V Q+  G  H A VT  G ++TWGE   GRLGHG  K    P LV  L+  +V  V+CGE
Sbjct: 263 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGE 322

Query: 382 SHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            H+  +S  G    W  G+   G LGH        PK +   L   +V  V  GT  S  
Sbjct: 323 YHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSAL 382

Query: 440 LTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL------- 487
            T +G +F +G G        +  S   P  V  LS ++ + V+ G  H  A+       
Sbjct: 383 ATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLS 442

Query: 488 ---SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              +    ++ WG     + G  N    + +P+ V  + +    Q+  G   ++A T 
Sbjct: 443 GSKASAKRLFTWGDGDQYRLGHANKETYL-EPTCVAAVAEYNFHQVACGYTMTVALTA 499


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 176/380 (46%), Gaps = 38/380 (10%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVS 270
           +Q +   +RHI        L+   G +  +G+   G LG         P  V    A+  
Sbjct: 130 VQQIACGVRHIA-------LVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEF-LAVSH 181

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +    C E H   +TS  ++Y+WG G    G LGHG  +S   PK ++G L G +V  V+
Sbjct: 182 VDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVA 241

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTL- 385
            G  HSA  T +G LYT+G+G +G LGHGD +S   P  V  LS +    V+CG  HT  
Sbjct: 242 CGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAA 301

Query: 386 ---VLSQDG-----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
              V+SQ G       +++ G G+  +LGH +      P  + +L  +   ++  G + +
Sbjct: 302 IVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMT 361

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQY 490
           VALT  G VF  G      LG  SS      P LV   L    + ++S G  H + L+  
Sbjct: 362 VALTTSGHVFTMGGTAYGQLGNPSSDGVI--PCLVQDRLVGEFVEEISCGAYHTVVLTSR 419

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
           NEV++WG  + G+ G  +  +    P+ +  L+D  V+ I  GS F+ +  +   +  +S
Sbjct: 420 NEVFSWGRGSNGRLGHGDVED-RKAPTLIEALKDRHVKSISCGSNFTASICI---HKWVS 475

Query: 551 SAFTPLCVDVRPHTFTLIRE 570
            A   +C   R   F   R+
Sbjct: 476 GADQSVCTGCR-QAFGFTRK 494


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  132 bits (333), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 21/359 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-WL 248
           V+ WG N + Q+ +        P       ++  I AG+  +  L   G +  +G   W 
Sbjct: 268 VWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWGDNEWG 327

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            L N+  + L   V  ++    ++++   E H L +  +G V+SWG   +G+LG+GN++ 
Sbjct: 328 QLGNSISEKLCVPVQFKSLKDVVAIAAGCE-HSLALKKDGTVWSWGNNYYGQLGNGNSID 386

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
              P  + G    K V  ++ G++HS A+ +DG ++ WG  + G+LG+G  KS   P  V
Sbjct: 387 SYVPVQVRGL---KDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQV 443

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKF 425
             L DV A++ G  H+L   +DG TVW+ G+   G+LG+   G       P  ++ L+  
Sbjct: 444 KGLKDVVAIAAGSDHSLAFKKDG-TVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKD- 501

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGL---GLRSSSI--SFHTPVLVTGLSSHQIVDVSIG 480
            V  V AG+  S+AL  DG ++ WG    GL  + I  SF  PV V GL    +V ++ G
Sbjct: 502 -VVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIERSF-VPVQVKGLK--DVVAIAAG 557

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +H L L +   V+AWG        +++       P ++ GL+DV    I AG   S+ 
Sbjct: 558 SNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVA--IAAGEHHSLG 614



 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 182/370 (49%), Gaps = 41/370 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           V+ WG N   Q+ +   G+ S   +Q     ++  I AG   +  L   G +  +G    
Sbjct: 115 VWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWG---- 170

Query: 249 GLANTTIQ---------PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW--GVGE 297
              N +IQ          +P ++     +V+++  K    + L +  +G V+ W      
Sbjct: 171 --LNESIQVIDGSNKDFSVPFQIKGLKDVVAIAAGK---DYSLALKKDGTVWMWEYKYNY 225

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           + +L  G       P  + G    K V  ++AG  HS A+ +DG ++ WG   +G+LG+G
Sbjct: 226 YEQLRRGADEYSPVPVQVEGL---KDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNG 282

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
             +  + P  V  L DV A++ GE+H+L L +DG T+W+ G    G+LG+  + K+  P 
Sbjct: 283 KSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDG-TIWAWGDNEWGQLGNSISEKLCVPV 341

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
             ++L+   V  + AG   S+AL  DG V+ WG      LG   +SI  + PV V GL  
Sbjct: 342 QFKSLKD--VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLG-NGNSIDSYVPVQVRGLK- 397

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD-NFSNPVDQPSKVVGLEDVCVRQI 530
             +V ++ G++H LAL +   V+AWG+N  GQ G   N S+ V  P +V GL+DV    I
Sbjct: 398 -DVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFV--PVQVKGLKDVVA--I 452

Query: 531 CAGSLFSIAY 540
            AGS  S+A+
Sbjct: 453 AAGSDHSLAF 462



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 184/419 (43%), Gaps = 87/419 (20%)

Query: 190 VYTWGCNLHHQILDEVRGK-CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           ++ WG N   Q+ + +  K C   + +SL  ++  I AG   +  L   G +  +G    
Sbjct: 318 IWAWGDNEWGQLGNSISEKLCVPVQFKSLK-DVVAIAAGCEHSLALKKDGTVWSWGNNYY 376

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  N+    +P +V     +V+++      AH L +  +G V++WG  E G+LG+G 
Sbjct: 377 GQLGNGNSIDSYVPVQVRGLKDVVAIA---TGNAHSLALKKDGTVWAWGNNEFGQLGNGT 433

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL---KSR 362
             S   P  + G    K V  ++AG  HS A  +DG ++ WG  + G+LG+G     +  
Sbjct: 434 NKSSFVPVQVKGL---KDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYY 490

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  V  L DV AV+ G  H+L L +DG T+W+ GS   G LG+ D  +   P  ++ L
Sbjct: 491 AVPVQVKGLKDVVAVAAGSVHSLALKKDG-TIWAWGSNYHGLLGN-DIERSFVPVQVKGL 548

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG-------------------------------- 450
           +   V  + AG++ S+ L  DG V+ WG                                
Sbjct: 549 KD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAIA 606

Query: 451 ------LGLRSSSISFH-------------------TPVLVTGLSSHQIVDVSIGDSHVL 485
                 LGL+     +                     PV V GL    I+ ++ G+ H L
Sbjct: 607 AGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPVQVKGLK--DILAIATGEWHSL 664

Query: 486 ALSQYNEVYAWGSNTMGQ-----CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           A+ +   V+AWG N+ GQ      G+D +S     P +V G++DV    I AGS  S+A
Sbjct: 665 AIKKDGTVWAWGENSTGQLGNETSGKDKYSYV---PVQVKGIKDVLA--ISAGSYHSLA 718



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 38/337 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N   Q+ +        P       ++  I AG   +      G +  +G    G
Sbjct: 418 VWAWGNNEFGQLGNGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFG 477

Query: 250 -LANTT-----IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            L N +        +P +V     +V+++       H L +  +G +++WG   HG LG 
Sbjct: 478 QLGNGSGGYGQYYAVPVQVKGLKDVVAVA---AGSVHSLALKKDGTIWAWGSNYHGLLG- 533

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE------GDHGRLGHG 357
            N + +    + + GL  K V  ++AG +HS  + +DG ++ WGE       ++ RL + 
Sbjct: 534 -NDIERSFVPVQVKGL--KDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVY- 589

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TP 416
                  P  +  L DV A++ GE H+L L +DG TVW+ G    G+LG+    K +  P
Sbjct: 590 ----SSVPVQIKGLKDVVAIAAGEHHSLGLKKDG-TVWAWGDNFFGQLGNSPREKYSLVP 644

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT--PVLVTG 468
             ++ L+   +  +  G   S+A+  DG V+ WG      LG  +S    ++  PV V G
Sbjct: 645 VQVKGLKD--ILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKG 702

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +    ++ +S G  H LAL +   V+ WG+N  GQ G
Sbjct: 703 IK--DVLAISAGSYHSLALKKDGTVWGWGANARGQLG 737



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 133/284 (46%), Gaps = 24/284 (8%)

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           LE  I+ ++       H L +  +G V++WG    G+ G   T       + + GL  K 
Sbjct: 44  LENNIIQIA---AGNYHSLALKGDGTVWAWGWNHWGQCG---TEESSIIPVKVKGL--KD 95

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELSDVGAVSCGES 382
           V  ++AG  HS  + +DG ++ WG    G+LG+ D       P  V  L DV A++ G+ 
Sbjct: 96  VVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDG 155

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           ++L L +DG TVW  G     ++        + P  I+ L+   V  + AG  +S+AL  
Sbjct: 156 YSLGLKKDG-TVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD--VVAIAAGKDYSLALKK 212

Query: 443 DGLVFWWGLG------LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
           DG V+ W         LR  +  +   PV V GL    +V ++ G  H LAL +   V+A
Sbjct: 213 DGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTVWA 270

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           WG+N  GQ G     +  D P +V  L+DV    I AG   S+A
Sbjct: 271 WGNNYYGQLGNGKSEDSYD-PVQVKNLKDVVA--IAAGENHSLA 311



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 8/230 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           ++ WG N H  + +++       +++ L  ++  I AG   + +L   G +  +G+ W  
Sbjct: 521 IWAWGSNYHGLLGNDIERSFVPVQVKGLK-DVVAIAAGSNHSLVLKKDGTVWAWGEVWFD 579

Query: 250 LANTTIQPLPKRVPLE-AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
           L N   + +   VP++   +  +      E H L +  +G V++WG    G+LG+     
Sbjct: 580 LLNENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREK 639

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH---GDLKSRHTP 365
                + + GL  K +  ++ G  HS A+ +DG ++ WGE   G+LG+   G  K  + P
Sbjct: 640 YSLVPVQVKGL--KDILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVP 697

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
             V  + DV A+S G  H+L L +DG TVW  G+   G+LG+   G  +T
Sbjct: 698 VQVKGIKDVLAISAGSYHSLALKKDG-TVWGWGANARGQLGNGGAGVYST 746


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  132 bits (333), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 170/366 (46%), Gaps = 23/366 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+ WG N + Q+ D      S P  +  LPS +  I AG + T  L  + G+  +G  
Sbjct: 385 GGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVTAIAAGNYHTCALTGSDGVWCWGDN 444

Query: 246 --GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG   TT +  P  V  L + + +++       H   +TS G V+ WG  + G+LG
Sbjct: 445 FYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGN---YHTCALTSSGGVWCWGRNDSGQLG 501

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T ++  P  + GGL    VT ++AG  H+ A+   G ++ WG  + G+LG G     
Sbjct: 502 DGTTTNRSTPGAV-GGLP-SGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDS 559

Query: 363 HTPTLVTEL-SDVGAVSCGESHTLVLS-QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            TP  V  L S V A++ G  HT  L+  DG  VW  G+ + G+LG   T   +TP  + 
Sbjct: 560 STPVAVGGLPSGVMAIAAGNYHTCALTGSDG--VWCWGTNSDGQLGDGTTTNRSTPVAVS 617

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIV 475
            L    V  + AG   + ALT  G V+ WG  L       ++ +  TP  V+GL S  + 
Sbjct: 618 GLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVT 675

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            ++ GD H  AL+    V+ WG N  GQ G    +N    P  V GL    V  I AG  
Sbjct: 676 AIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTN-RSTPGAVSGLPSG-VTAIAAGVY 733

Query: 536 FSIAYT 541
            + A T
Sbjct: 734 HTCALT 739



 Score =  127 bits (319), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 169/366 (46%), Gaps = 23/366 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
            +V+ WG N   Q+ D      S P  +  LPS +  I AG   T  L S+GG++ +G  
Sbjct: 79  GEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGN 138

Query: 246 --GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG  + T +  P  V  L + + +++      AH   + S G V+ WG    G+LG
Sbjct: 139 YFGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGG---AHTCALMSSGGVWCWGYNLSGQLG 195

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G+T+    P  + G      VT ++AG++H+ A+T  G ++ WG+   G+LG G     
Sbjct: 196 DGSTIYHITPVAVSG--LPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDS 253

Query: 363 HTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            TP  V  L S V A++ G  +T  L+  G  VW  G  + G+LG       +TP  +  
Sbjct: 254 STPAAVGGLPSGVTAIAAGGRYTCALTSSGG-VWCWGRNDSGQLGDGSFTNRSTPGAVGG 312

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  + AG + + ALT  G V+ WG      LG   S     TP  V+GL S  + 
Sbjct: 313 LPS-GVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLG-DGSYTDRSTPGAVSGLPS-GVT 369

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            ++ G +H  A +    V+ WG N  GQ G D  +     P  V GL    V  I AG+ 
Sbjct: 370 AIAAGGAHTCARTSSGGVWCWGGNFYGQLG-DGTTTDRSTPGAVSGLPSG-VTAIAAGNY 427

Query: 536 FSIAYT 541
            + A T
Sbjct: 428 HTCALT 433



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 170/367 (46%), Gaps = 23/367 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           ++   V+ WG NL  Q+ D        P  +  LPS +  I AG   T  L  +GG+  +
Sbjct: 178 MSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCW 237

Query: 244 GK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G    G LG  + T    P  V  L + + +++       +   +TS G V+ WG  + G
Sbjct: 238 GDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGG---RYTCALTSSGGVWCWGRNDSG 294

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG G+  ++  P  + GGL    VT ++AG +H+ A+T  G ++ WG  D G+LG G  
Sbjct: 295 QLGDGSFTNRSTPGAV-GGLP-SGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSY 352

Query: 360 KSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             R TP  V+ L S V A++ G +HT   +  G  VW  G    G+LG   T   +TP  
Sbjct: 353 TDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGG-VWCWGGNFYGQLGDGTTTDRSTPGA 411

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           +  L    V  + AG   + ALT    V+ WG      LG   ++ +  TP  V+GL S 
Sbjct: 412 VSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLG-DGTTTNRSTPGAVSGLPS- 468

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
            +  ++ G+ H  AL+    V+ WG N  GQ G    +N    P  V GL    V  I A
Sbjct: 469 GVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN-RSTPGAVGGLPSG-VTAIAA 526

Query: 533 GSLFSIA 539
           G   + A
Sbjct: 527 GDYHTCA 533



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 152/333 (45%), Gaps = 22/333 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVP-LEAAIVSLSVSK 275
            +  I AG + T  L  +G +  +G  W   LG  + T +  P  V  L + + +++   
Sbjct: 61  GVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGG 120

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
              AH   +TS G V  WG    G+LG G+   +  P  + G      VT ++AG +H+ 
Sbjct: 121 ---AHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSG--LPSGVTAIAAGGAHTC 175

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTV 394
           A+   G ++ WG    G+LG G      TP  V+ L S+V A++ G +HT  L+  G  V
Sbjct: 176 ALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVTAIAAGYAHTCALTGSGG-V 234

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           W  G    G+LG       +TP  +  L    V  + AG  ++ ALT  G V+ WG    
Sbjct: 235 WCWGDNGFGQLGDGSFTDSSTPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVWCWGRNDS 293

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG   S  +  TP  V GL S  +  ++ G +H  AL+    V+ WG N  GQ G  +
Sbjct: 294 GQLG-DGSFTNRSTPGAVGGLPS-GVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGS 351

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +++    P  V GL    V  I AG   + A T
Sbjct: 352 YTD-RSTPGAVSGLPSG-VTAIAAGGAHTCART 382



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 142/315 (45%), Gaps = 17/315 (5%)

Query: 146 LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV----AHSKVYTWGCNLHHQI 201
             D+    LGD  ++N +T    +  P     I   +       +   V+ WG N   Q+
Sbjct: 441 WGDNFYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQL 500

Query: 202 LDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQP 257
            D      S P  +  LPS +  I AG + T  L S+GG+  +G   +G LG  + T   
Sbjct: 501 GDGTTTNRSTPGAVGGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSS 560

Query: 258 LPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
            P  V  L + +++++       H   +T    V+ WG    G+LG G T ++  P  + 
Sbjct: 561 TPVAVGGLPSGVMAIAAGN---YHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVS 617

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVG 375
           G      VT ++AG+ H+ A+T  G ++ WG    G+LG G   +R TP  V+ L S V 
Sbjct: 618 G--LPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVT 675

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           A++ G+ HT  L+  G  VW  G    G+LG   T   +TP  +  L    V  + AG  
Sbjct: 676 AIAAGDEHTCALTGSGG-VWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGVY 733

Query: 436 FSVALTWDGLVFWWG 450
            + ALT  G V  WG
Sbjct: 734 HTCALTGSGGVMCWG 748



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 15/234 (6%)

Query: 149 DNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV----AHSKVYTWGCNLHHQILDE 204
           +N   LGD   ++S+T +     P     I   +           V+ WG N   Q+ D 
Sbjct: 546 NNRGQLGDGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDG 605

Query: 205 VRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPK 260
                S P  +  LPS +  I AG + T  L S+GG+  +G    G LG   TT +  P 
Sbjct: 606 TTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPG 665

Query: 261 RVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
            V  L + + +++     + H   +T  G V+ WG   +G+LG G T ++  P  + G  
Sbjct: 666 AVSGLPSGVTAIAAG---DEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSG-- 720

Query: 320 YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELS 372
               VT ++AG  H+ A+T  G +  WG    G+LG G    R TP  +VT  S
Sbjct: 721 LPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSAS 774


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  132 bits (333), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 178/397 (44%), Gaps = 33/397 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G    +G+   G LG    +    PK +    +  ++ +  C
Sbjct: 308 DVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA-LSTTNIELVAC 366

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
            E H   VT  G++Y+WG G+ G LGHGN +S   PK +   + G  V+ ++ G  H+A 
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 426

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ----- 389
           VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +     
Sbjct: 427 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 486

Query: 390 ------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
                     +++ G G+  +LGH D      P  + AL +    +V  G S +VALT  
Sbjct: 487 SSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTS 546

Query: 444 GLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G V+  G  +     + H     P  V G L    + +++ G  HV  L+   EVY WG 
Sbjct: 547 GHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGK 606

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
            + G+ G  + ++  + P+ V  L+D  V+ I  GS F+ A  +    S +  +    C 
Sbjct: 607 GSNGRLGHGD-ADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGC- 664

Query: 559 DVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQ 595
             +P  F   R        C+  G  + FC   T+ +
Sbjct: 665 -RQPFNFKRKRH------NCYNCG--LVFCHSCTNKK 692



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 138/299 (46%), Gaps = 28/299 (9%)

Query: 258 LPKRVPLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           LPK   LE+ IV  +    C   H + VT +GE +SWG    G+LGHG   + + PKLI 
Sbjct: 297 LPK--ALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI- 353

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--- 373
             L    +  V+ G  HS AVT  G LYTWG+GD G LGHG+  S   P  V  L +   
Sbjct: 354 DALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIH 413

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V +++CG  HT V++  G  +++ G G  G LGH D   V  P+ +++L+  R  +   G
Sbjct: 414 VSSIACGPYHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 472

Query: 434 TSFSVALT------------WDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVD 476
              + A+               G +F WG G +S            P  V  L       
Sbjct: 473 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQ 532

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGS 534
           V+ G S  +AL+    VY  GS   GQ G  +    V  P++V G L    V +I  G+
Sbjct: 533 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV--PTRVEGKLHKSFVEEIACGA 589



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 155/334 (46%), Gaps = 34/334 (10%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           ++WG     ++   V      P+L    S  NI  +  G++ +  +  +G L  +GKG  
Sbjct: 329 FSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDF 388

Query: 249 GL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+    N     +PKRV      + +S   C   H   VTS G+++++G G  G LGHG+
Sbjct: 389 GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 448

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGEGDHGR 353
             S   P+ +   L G R  + + G  H+AAV E             G L+TWG+GD  R
Sbjct: 449 RKSVFIPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 507

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HED 409
           LGHGD + +  PT V  L   +   V+CG S T+ L+  GH V++MGS   G+LG  H D
Sbjct: 508 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYGQLGNPHAD 566

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPV 464
            GKV T +V   L K  V ++  G      LT    V+ WG G         +   ++P 
Sbjct: 567 -GKVPT-RVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPT 624

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           LV  L   Q+  ++ G +   A+     ++ W S
Sbjct: 625 LVESLKDKQVKSIACGSNFTAAVC----LHKWAS 654


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  132 bits (333), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 172/372 (46%), Gaps = 27/372 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++R I +G     ++   G +  +G+   G LG         P  V     +V+L +  C
Sbjct: 92  DVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPHLVEF-PDVVTLDIVAC 150

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   V+     ++WG G H  G LGHGN +S   PK + G L G RV  V+ G  HS
Sbjct: 151 GEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHS 210

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL----- 387
           A  T +G L+T+G+G  G LGHGD +S   P  V  LS +    V+CG  HT  +     
Sbjct: 211 ALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVACGVWHTAAIIEVAF 270

Query: 388 -SQDGHTVWSM---GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            S    + W +   G G+  +LGH +      P  +  L ++  +++  G + +VALT  
Sbjct: 271 QSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTS 330

Query: 444 GLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G VF  G      L + + +   P LV   L    I ++S G  HV A++  +E+Y WG 
Sbjct: 331 GHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHVAAVTSRSELYTWGK 390

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
            + G+ G  + ++    P+ V+ L+D  ++ I  GS F+       +   +S     +C 
Sbjct: 391 GSNGRLGHGD-TDDRKSPTLVLALKDRHLKNISCGSNFTSCVC---NQKYVSGTDQSVCF 446

Query: 559 DVR-PHTFTLIR 569
             R P   T IR
Sbjct: 447 GCRQPFGLTRIR 458


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  132 bits (333), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG       P PK +   A + ++ +  C
Sbjct: 357 DVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANM-NIELVAC 415

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G    G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 416 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 475

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 476 AIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 535

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    ++  G   +VALT
Sbjct: 536 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 595

Query: 442 WDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 596 TSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 655

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           G    G+ G  + ++    P+ V  L+D  VR +  G  F+ A  +
Sbjct: 656 GKGANGRLGHGD-TDDRSSPTLVEALKDKQVRTVVCGINFTAAICI 700


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  132 bits (333), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 139/291 (47%), Gaps = 28/291 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGK--LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C + H   +T  G++YSWG G H    LGHGN  S   PK + G L G  V+ V+ G  H
Sbjct: 346 CGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWH 405

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL---- 387
           +A V   G L+T+G+G  G LGHGD +S   P  V  LS   V  V+CG  HT  L    
Sbjct: 406 TAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHTAALVEVT 465

Query: 388 ---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
                    S  G  V++ G G  G+LGH D      P+ + +L    + +V  G S +V
Sbjct: 466 NEASEAEVGSSRGQ-VFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTV 524

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYN 491
           +LT  G V+  G      LG  ++  +F  P  V G +    + +++ G  HV  L+  +
Sbjct: 525 SLTSTGHVYTMGSTAYGQLGNPTAKGNF--PARVEGDIVEASVEEIACGSYHVAVLTSKS 582

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           E+Y WG    GQ G     N   +P+ V  L++  V+ I  GS F+    V
Sbjct: 583 EIYTWGKGLNGQLGHGTIENK-REPAVVGFLKEKQVKAITCGSNFTAVICV 632



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 36/279 (12%)

Query: 190 VYTWGCNLHHQIL--DEVRGKCSRPR-----LQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           +Y+WG   H+  L        C  P+     LQ L   + ++  G + T ++ S+G L  
Sbjct: 360 LYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGL--YVSYVACGPWHTAVVASSGQLFT 417

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS--------------KCSEAHVLTVT 285
           +G    G LG  +     +P+ V + + ++   V+              + SEA V   +
Sbjct: 418 FGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHTAALVEVTNEASEAEV--GS 475

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           S G+V++WG GE G+LGHG+  +Q  P+ ++  L  + + QV+ GHS + ++T  G +YT
Sbjct: 476 SRGQVFTWGDGEKGQLGHGDNDAQLLPECVI-SLSNENICQVACGHSLTVSLTSTGHVYT 534

Query: 346 WGEGDHGRLGH----GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            G   +G+LG+    G+  +R    +V   + V  ++CG  H  VL+     +++ G G 
Sbjct: 535 MGSTAYGQLGNPTAKGNFPARVEGDIVE--ASVEEIACGSYHVAVLTSKSE-IYTWGKGL 591

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            G+LGH        P V+  L++ +V+ +  G++F+  +
Sbjct: 592 NGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVI 630


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  132 bits (333), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 154/335 (45%), Gaps = 29/335 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E H   VT  G++Y+WG G+ G LGHGN +S   PK +   L G  V+ ++ G  H+A
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTA 426

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ---- 389
            VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +    
Sbjct: 427 VVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 486

Query: 390 -------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                      +++ G G+ G+LGH +      P  + AL +    +V  G S +VALT 
Sbjct: 487 SSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 546

Query: 443 DGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G      L +S      P  V G L    + +++ G  HV  L+   EVY WG
Sbjct: 547 SGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 606

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             + G+ G  +  +  + P+ V  L+D  V+ I  G+ F+ A  +    S +  +    C
Sbjct: 607 KGSNGRLGHGDVDD-RNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGC 665

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVT 592
              +P +F   R        C+  G  + FC   T
Sbjct: 666 --RQPFSFKRKRH------NCYNCG--LVFCHSCT 690



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 140/300 (46%), Gaps = 30/300 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+ IV L V    C   H + VT +GE +SWG    G+LGHG   + ++PKLI
Sbjct: 298 LPK--ALESTIV-LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLI 354

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-- 373
              L    +  V+ G  HS AVT  G LYTWG+GD G LGHG+  S   P  V  L +  
Sbjct: 355 -DALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGI 413

Query: 374 -VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            V +++CG  HT V++  G  +++ G G  G LGH D   V  P+ +++L+  R  +   
Sbjct: 414 HVSSIACGPYHTAVVTSAGQ-LFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAAC 472

Query: 433 GTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIV 475
           G   + A+               G +F WG G +      +      P  V  L      
Sbjct: 473 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC 532

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGS 534
            V+ G S  +AL+    VY  GS   GQ G  +    +  P++V G L    V +I  G+
Sbjct: 533 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKL--PNRVEGKLHKSFVEEIACGA 590



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 153/332 (46%), Gaps = 30/332 (9%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           ++WG     ++   V     +P+L      +NI  +  G+F +  +  +G L  +GKG  
Sbjct: 330 FSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDF 389

Query: 249 GL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+    N     +PKRV      + +S   C   H   VTS G+++++G G  G LGHG+
Sbjct: 390 GVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 449

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGEGDHGR 353
             S   P+ +   L G R  + + G  H+AAV E             G L+TWG+GD GR
Sbjct: 450 KKSVFIPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LGHG+ + +  PT V  L   +   V+CG S T+ L+  GH V++MGS   G+LG+    
Sbjct: 509 LGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYGQLGNSHAD 567

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSI-SFHTPVLV 466
                +V   L K  V ++  G      LT    V+ WG G    L    +   ++P LV
Sbjct: 568 GKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLV 627

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
             L   Q+  ++ G +   A+     ++ W S
Sbjct: 628 ESLKDKQVKSIACGTNFTAAVC----IHRWAS 655


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG       P PK +   A + ++ +  C
Sbjct: 311 DVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANM-NIELVAC 369

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G    G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 429

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 430 AIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 489

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    ++  G   +VALT
Sbjct: 490 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 549

Query: 442 WDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 550 TSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 609

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           G    G+ G  + ++    P+ V  L+D  VR +  G  F+ A  +
Sbjct: 610 GKGANGRLGHGD-TDDRSSPTLVEALKDKQVRTVVCGINFTAAICI 654


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 145/296 (48%), Gaps = 22/296 (7%)

Query: 260 KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
           +RVP  A    +  + C E H L + S+G V+S G    G+LG      + RP LI   L
Sbjct: 12  RRVPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIK-AL 70

Query: 320 YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVG--A 376
               V  VS G  HS AV   G ++ WG G  G+LG  + K +  TP  +  L+ +    
Sbjct: 71  ETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQ 130

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           VSCG  H+L LS+DG  V+S G  + G+LG  ++     +P+ + +L    + +V AG +
Sbjct: 131 VSCGHYHSLALSEDGQ-VYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGA 189

Query: 436 FSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S AL+  G  F WG        L   ++ +  + P  +  L S  ++ +S G  H   L
Sbjct: 190 HSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVL 249

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQ---PSKVVGLEDVCVRQICAGSLFSIAY 540
           +Q  +V+ +G N+ GQ G     NP  +   P +V G+ D  V QI  GS  ++AY
Sbjct: 250 TQNGKVFTFGDNSCGQLGY----NPTAKKRGPQQVEGI-DGLVSQIDCGSYHTLAY 300



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           + + WG G  G+L       R  PT     ++V   +CGE H+L+L  DG TV S G   
Sbjct: 1   MYFCWGNG--GQL-------RRVPTGAGG-AEVRQAACGERHSLLLLSDG-TVHSCGDNT 49

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
            G+LG     +   P +I+AL    V  V  G   S+A+   G VF WG      LG+  
Sbjct: 50  QGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEE 109

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
                 TP  +  L+  +I+ VS G  H LALS+  +VY+WG N+ GQ G          
Sbjct: 110 CKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQAS 169

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS----------ALSSAFTPLCVDVRPHTF 565
           P +V  LE + + Q+ AG   S A ++  ++           ALS   TP+    +PH+ 
Sbjct: 170 PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPV-QRYKPHSI 228

Query: 566 TLIREFLEQYSAC 578
             ++     Y +C
Sbjct: 229 GALKSLDVIYISC 241



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 37/329 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA--------GQFCTFLLDSTGGLL 241
           V++ G N   Q+     G+  +PR +  P  I+ +E         G+  +  +   G + 
Sbjct: 42  VHSCGDNTQGQL-----GRRGKPR-EERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVF 95

Query: 242 VYG---KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            +G   +G LG+     +   PK++     I  + VS C   H L ++ +G+VYSWG   
Sbjct: 96  AWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVS-CGHYHSLALSEDGQVYSWGKNS 154

Query: 298 HGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL-- 354
            G+LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG  + G+L  
Sbjct: 155 QGQLGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLAL 213

Query: 355 -GHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            G+     R+ P  +  L   DV  +SCG  HT VL+Q+G  V++ G  + G+LG+  T 
Sbjct: 214 SGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNG-KVFTFGDNSCGQLGYNPTA 272

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           K   P+ +E +    V ++  G+  ++A  +  G V  +G G   +S   H+   +    
Sbjct: 273 KKRGPQQVEGIDGL-VSQIDCGSYHTLAYVYTTGEVVSFGRGRNCASSPTHSEAQMENFD 331

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S++ +VDV +   H+ A +  N V
Sbjct: 332 MSCLISANDLVDVQV--KHIFAGTYVNVV 358


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  132 bits (332), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 152/316 (48%), Gaps = 31/316 (9%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLS 272
           S  +++  I AG + + +L S G +   G+   G LG           +V     +VSL 
Sbjct: 31  SESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDVVSLD 90

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
                  H L +T  G V+ WG    G++  G   +  RP  I G    K + QVS G  
Sbjct: 91  ---SDMDHTLAITKHGTVWGWGYNSKGEITEGGK-NIARPVQINGL---KDIVQVSTGLV 143

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           HS A+ + G +++WGE  +G+LG+G  +    PT V  LS++ A+  G  H+L LS DG 
Sbjct: 144 HSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNIVAIEAGAEHSLALSNDG- 202

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
            VW+ G    G+LG+ +T K   P++++ L    +  +  G + S+AL  DG ++ WG  
Sbjct: 203 KVWAWGRNEFGQLGNGETEKSNIPRLVKNLEN--IEMIAGGDNHSLALDHDGAIWAWGYN 260

Query: 451 ----LGLRSSSI-----------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
               +G  SS++           +   PV + GL   ++  VS G  H  AL++  EVYA
Sbjct: 261 SNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG-KVKQVSAGIKHSTALTENGEVYA 319

Query: 496 WGSNTMGQCGQDNFSN 511
           WG N  GQ G  +  +
Sbjct: 320 WGWNEYGQLGNGSMKD 335



 Score =  120 bits (302), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 32/270 (11%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +   G V+SWG   +G+LG+G       P  +    +   +  + AG  HS A++ 
Sbjct: 144 HSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVE---FLSNIVAIEAGAEHSLALSN 200

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG  + G+LG+G+ +  + P LV  L ++  ++ G++H+L L  DG  +W+ G 
Sbjct: 201 DGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLALDHDG-AIWAWGY 259

Query: 400 GNLGKLG------HEDTGKV------TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
            + G++G      +E  G++      T P  +  L   +V++V AG   S ALT +G V+
Sbjct: 260 NSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG-KVKQVSAGIKHSTALTENGEVY 318

Query: 448 WWG------LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            WG      LG   ++ S +     V         I+D+  G  H  A+ +   +YAWG 
Sbjct: 319 AWGWNEYGQLGNGSMKDSKVPLRNNV------GRSIIDIETGSYHSFAVDESGVIYAWGD 372

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
            T GQ G   F    ++ + +V +  + ++
Sbjct: 373 ATYGQLGDGTFGKDGNRITYMVRMNPIVIK 402



 Score =  103 bits (258), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 19/237 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V++WG N++ Q+ +      S P      SNI  IEAG   +  L + G +  +G+   G
Sbjct: 154 VWSWGENIYGQLGNGTNQDSSIPTKVEFLSNIVAIEAGAEHSLALSNDGKVWAWGRNEFG 213

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   T    +P+ V     + ++ +    + H L +  +G +++WG   +G++G G++
Sbjct: 214 QLGNGETEKSNIPRLV---KNLENIEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSS 270

Query: 307 --------LSQRRPK---LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
                   L ++R K   + + GLYGK V QVSAG  HS A+TE+G +Y WG  ++G+LG
Sbjct: 271 NVYEKDGQLREKRNKTEPVKLNGLYGK-VKQVSAGIKHSTALTENGEVYAWGWNEYGQLG 329

Query: 356 HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           +G +K    P        +  +  G  H+  + + G  +++ G    G+LG    GK
Sbjct: 330 NGSMKDSKVPLRNNVGRSIIDIETGSYHSFAVDESG-VIYAWGDATYGQLGDGTFGK 385



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 25/218 (11%)

Query: 162 SNTDIDSTSTPKLTY--NIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRP 212
           + T+ DS+   K+ +  NI   +    HS       KV+ WG N   Q+ +    K + P
Sbjct: 167 NGTNQDSSIPTKVEFLSNIVAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIP 226

Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI-----QPLPKRVPL 264
           RL     NI  I  G   +  LD  G +  +G    G +G  ++ +     Q   KR   
Sbjct: 227 RLVKNLENIEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKT 286

Query: 265 EAAIVSLSVSKCSEA-----HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
           E   ++    K  +      H   +T  GEVY+WG  E+G+LG+G   S +  K+ +   
Sbjct: 287 EPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNG---SMKDSKVPLRNN 343

Query: 320 YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G+ +  +  G  HS AV E G++Y WG+  +G+LG G
Sbjct: 344 VGRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGDG 381


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 169/360 (46%), Gaps = 22/360 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--- 244
             V+ WG N   Q+ D      + P      + +  +  G     +L   G L  +G   
Sbjct: 328 GAVFAWGANGSGQLGDGDTTDRATPGPVPGLNAVASVVGGAQHALVLRKDGTLWAWGGGL 387

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   +    +P  V   A + S++       H L    +G V++WG   +G+LG G
Sbjct: 388 SGQLGHGGSERHVVPAPVMRLAGVTSMATGSF---HSLAALGDGSVWAWGRNTYGQLGDG 444

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +T ++R   + + GL G R +  SA H HS AV  DG ++ WG    G+LG G    R  
Sbjct: 445 ST-AERHAAVRVEGLGGVR-SVASAAH-HSLAVGMDGTVWAWGRNAAGQLGDGTTLDRAR 501

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V  L+ V AV+ G SH L L  DG +VW+ G   LG+LG   T    TP  +  L  
Sbjct: 502 PVAVPGLTSVTAVAAGGSHVLALRSDG-SVWAWGYNALGQLGDGTTVDRLTPVRVSGLGA 560

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSI 479
             V  V AG+ FS+AL  DG V+ WG G          +   +PV V GL++  I  V+ 
Sbjct: 561 --VVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGLAN--ITRVAA 616

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G +H LA+     V+AWG N  GQ G  ++++   +P +V GL+ +    +  G   S+A
Sbjct: 617 GSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRF-RPVQVPGLQGITA--VSGGRSHSMA 673



 Score =  128 bits (321), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 168/359 (46%), Gaps = 24/359 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D       RP        I  +  G+  +  L   G +  +G    G
Sbjct: 630 VWAWGDNGEGQLGDGSWADRFRPVQVPGLQGITAVSGGRSHSMALQGDGTVRAWGYNGYG 689

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG    T +  P  +P    I +L     S  HVL + ++G +  WG    G+LG G  
Sbjct: 690 QLGDGTLTSRVRPALIPGLTGIQAL---HPSHLHVLALHADGTLRGWGYNRFGQLGLGAA 746

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                P  + G   G RV ++S G +H+  V  DG +  WGE   G+LG G    R  P 
Sbjct: 747 GWSAVPVQVRG--IG-RVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPV 803

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  +  V +V+ G  H+L L+ DG TVW+ G+   G+LG   T    TP ++E LR   
Sbjct: 804 SVPGVPCVRSVASGIQHSLALACDG-TVWAWGANARGQLGDGTTTPRVTPGLVEGLRG-- 860

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIG 480
           V  + AG   SVAL  DG V+ WG G  S  +   T      P  V  LS+   V V++G
Sbjct: 861 VVALAAGGDASVALRADGSVWSWG-GNASGQLGDGTLTDRALPAHVEHLSN--AVAVAVG 917

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           ++H LA+ +   ++AWG+N  GQ G D  + P   P +V GLE V    + AG  FS+A
Sbjct: 918 ETHALAVGEDGALWAWGANGSGQLG-DGGTAPSLTPVRVKGLERVA--SVAAGRAFSVA 973



 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 171/412 (41%), Gaps = 74/412 (17%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
            V+ WG N   Q+ D        P L      +  + AG   +  L + G +  +G    G
Sbjct: 830  VWAWGANARGQLGDGTTTPRVTPGLVEGLRGVVALAAGGDASVALRADGSVWSWGGNASG 889

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG    T + LP  V   +  V+++V    E H L V  +G +++WG    G+LG G T
Sbjct: 890  QLGDGTLTDRALPAHVEHLSNAVAVAVG---ETHALAVGEDGALWAWGANGSGQLGDGGT 946

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                 P  + G L  +RV  V+AG + S AV +DG  + WG    G+LG G   +R  P 
Sbjct: 947  APSLTPVRVKG-L--ERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPN 1003

Query: 367  LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT-PKVIEALRKF 425
             VT L  + A+S G  H + LS DG TVW+ G   LG+LG   +      P+ +  LR  
Sbjct: 1004 QVTSLKGIRAMSAGAHHVVALSADG-TVWTWGDNTLGQLGDGSSSPTGMWPRQVPELRG- 1061

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG------LG-------LRSSSISFHTPVL------V 466
             V  V AG  F+VA+  DG    WG      LG       L   ++    P +      V
Sbjct: 1062 -VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTV 1120

Query: 467  TGLSSHQIVDVS--------------IGDS-------------------------HVLAL 487
                 H +V +S              +GD                          H LAL
Sbjct: 1121 RAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAWHSLAL 1180

Query: 488  SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                 V+AWG+N  GQ G D  S P  +P +V GL DV    I +G   ++A
Sbjct: 1181 LSDGTVWAWGANGFGQLG-DGTSTPRTRPVQVAGLGDVVA--IGSGGYHALA 1229



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 166/359 (46%), Gaps = 24/359 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D      +RP      +++  + AG      L S G +  +G    G
Sbjct: 480 VWAWGRNAAGQLGDGTTLDRARPVAVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALG 539

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   T  +  P RV    A+V+++         + + S+G V++WG G  G+LG G  
Sbjct: 540 QLGDGTTVDRLTPVRVSGLGAVVAVAAGSYFS---MALQSDGTVWTWGEGFEGQLGDGGG 596

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           + +  P  + G L    +T+V+AG +H+ AV  DG ++ WG+   G+LG G    R  P 
Sbjct: 597 VQRLSPVRVEG-L--ANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPV 653

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L  + AVS G SH++ L  DG TV + G    G+LG         P +I  L    
Sbjct: 654 QVPGLQGITAVSGGRSHSMALQGDG-TVRAWGYNGYGQLGDGTLTSRVRPALIPGLTG-- 710

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           ++ +       +AL  DG +  WG      LGL ++  S   PV V G+   ++  +S+G
Sbjct: 711 IQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSA-VPVQVRGIG--RVDRLSVG 767

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +H L +     V AWG N  GQ G D  S     P  V G+   CVR + +G   S+A
Sbjct: 768 RAHTLMVRADGTVMAWGENGSGQLG-DGTSTHRTGPVSVPGVP--CVRSVASGIQHSLA 823



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 182/414 (43%), Gaps = 84/414 (20%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRL--QSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           V+ WG N H Q+    RG  ++P L  + +P    +  + AG   T  +   G +  +G 
Sbjct: 180 VWAWGTNFHGQL---GRGH-TQPGLTPEQVPGLNGVVALAAGFDFTLAVLEDGTVRAWGS 235

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   +T +  P +V   + I  +   +    H L +  +G V++WG    G+LG
Sbjct: 236 NGSGQLGDGTSTQRLSPVKVSELSGITEV---RAGTYHALALGKDGGVWTWGSNASGQLG 292

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T + R   + + GL  +RV  V++  S S A+ + G ++ WG    G+LG GD   R
Sbjct: 293 DG-TWNDRAVPMQVPGL--ERVKAVASMDSDSLALLDTGAVFAWGANGSGQLGDGDTTDR 349

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            TP  V  L+ V +V  G  H LVL +DG T+W+ G G  G+LGH  + +   P  +  +
Sbjct: 350 ATPGPVPGLNAVASVVGGAQHALVLRKDG-TLWAWGGGLSGQLGHGGSERHVVPAPV--M 406

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGL------------------------GLRSSSI 458
           R   V  +  G+  S+A   DG V+ WG                         G+RS + 
Sbjct: 407 RLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVRVEGLGGVRSVAS 466

Query: 459 SFH-------------------------------TPVLVTGLSSHQIVDVSIGDSHVLAL 487
           + H                                PV V GL+S  +  V+ G SHVLAL
Sbjct: 467 AAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS--VTAVAAGGSHVLAL 524

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIA 539
                V+AWG N +GQ G       VD+  P +V GL  V    + AGS FS+A
Sbjct: 525 RSDGSVWAWGYNALGQLGD---GTTVDRLTPVRVSGLGAVVA--VAAGSYFSMA 573



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 195/421 (46%), Gaps = 47/421 (11%)

Query: 145  TLADDNIKPLGDRKSSNSNTDIDSTSTPKL----TYNIGDTDISVA---HSKVYTWGCNL 197
            T  D+ +  LGD   S+S T +     P+L        G+   +VA         WG N 
Sbjct: 1032 TWGDNTLGQLGD--GSSSPTGMWPRQVPELRGVEAVAAGE-QFTVAVLLDGTARAWGSNE 1088

Query: 198  HHQILDEVRG--------KCSRPRLQSLPSNIRHIEA-GQFCTFLLDSTGGLLVYGK--- 245
            + Q+ D   G        K   P+++     +R + A GQ     + S G +  +G    
Sbjct: 1089 YGQLGDGKTGPQLTPMAVKIEGPKIRP---PVRTVRAWGQHAVVQM-SDGTVQTWGDNTF 1144

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            G LG   TT + +P  V   A++V++S       H L + S+G V++WG    G+LG G 
Sbjct: 1145 GQLGDGTTTRRAVPLTVYGLASVVAVSSGAW---HSLALLSDGTVWAWGANGFGQLGDGT 1201

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +  + RP  + G   G  V  + +G  H+ AV  DG ++TWG    G+LG G  +SR  P
Sbjct: 1202 STPRTRPVQVAG--LGD-VVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLP 1258

Query: 366  TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
            T V  L  V AV+ G+ ++L L  DG T+ + G+   G+LG + TG     +V       
Sbjct: 1259 TRVEGLEGVVAVAGGDHYSLALHSDG-TLSAWGNNASGQLG-DGTGTTRYSRVAVKG-VD 1315

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH-TPVLVTGLSSHQIVDVS 478
             V  V AG + +VAL  DG V+ WG      LG  +S       P  V  LSS  +  V 
Sbjct: 1316 GVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSS--VSAVG 1373

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
             G  H  A++    V+ WG N+ GQ G  + +N   +P +V  L DV V  +  G+ FS+
Sbjct: 1374 AGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRT-EPLRVRELSDVTV--VSGGADFSL 1430

Query: 539  A 539
            A
Sbjct: 1431 A 1431



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 109/210 (51%), Gaps = 13/210 (6%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE 381
           + +  V +G +HS A+  DG ++TWG    G+LG G    R TP  V  L  V AV+ G+
Sbjct: 109 ENIVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLDSVVAVAAGD 168

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            H+L L +DG TVW+ G+   G+LG   T    TP+ +  L    V  + AG  F++A+ 
Sbjct: 169 FHSLALREDG-TVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVL 225

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
            DG V  WG      LG  +S+    +PV V+ LS   I +V  G  H LAL +   V+ 
Sbjct: 226 EDGTVRAWGSNGSGQLGDGTSTQRL-SPVKVSELSG--ITEVRAGTYHALALGKDGGVWT 282

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           WGSN  GQ G D   N    P +V GLE V
Sbjct: 283 WGSNASGQLG-DGTWNDRAVPMQVPGLERV 311



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 25/335 (7%)

Query: 183  ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
            + ++   V TWG N   Q+ D    + + P      +++  + +G + +  L S G +  
Sbjct: 1129 VQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAWHSLALLSDGTVWA 1188

Query: 243  YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEH 298
            +G    G LG   +T    P+  P++ A +   V+  S   H L V S+G V++WG    
Sbjct: 1189 WGANGFGQLGDGTST----PRTRPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAF 1244

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G+LG G   S+  P  + G L G  V  V+ G  +S A+  DG L  WG    G+LG G 
Sbjct: 1245 GQLGDGTAESRSLPTRVEG-LEG--VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGT 1301

Query: 359  LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TP 416
              +R++   V  +  V  V  G +HT+ L  DG TVW+ G    G+LG   +G      P
Sbjct: 1302 GTTRYSRVAVKGVDGVVDVRAGATHTVALRGDG-TVWTWGDNAFGQLGDGASGTRMRLVP 1360

Query: 417  KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLS 470
            + +  L         A  +F+VAL   G V+ WG      LGL   + +   P+ V  LS
Sbjct: 1361 RPVPNLSSVSAVGAGARHTFAVAL--KGTVWTWGRNSHGQLGL-GDNTNRTEPLRVRELS 1417

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
               +  VS G    LA+ +   V +WGS+  G  G
Sbjct: 1418 --DVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLG 1450



 Score = 85.1 bits (209), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 109/240 (45%), Gaps = 18/240 (7%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
              V+TWG N   Q+ D      S P R++ L   +  +  G   +  L S G L  +G  
Sbjct: 1234 GSVWTWGYNAFGQLGDGTAESRSLPTRVEGL-EGVVAVAGGDHYSLALHSDGTLSAWGNN 1292

Query: 247  WLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
              G L + T      RV     +  +   +    H + +  +G V++WG    G+LG G 
Sbjct: 1293 ASGQLGDGTGTTRYSRV-AVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGA 1351

Query: 306  TLSQRR------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            + ++ R      P L         V+ V AG  H+ AV   G ++TWG   HG+LG GD 
Sbjct: 1352 SGTRMRLVPRPVPNL-------SSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDN 1404

Query: 360  KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             +R  P  V ELSDV  VS G   +L + +DG TV S GS   G LG   TG  ++P  +
Sbjct: 1405 TNRTEPLRVRELSDVTVVSGGADFSLAMKRDG-TVLSWGSSLYGSLGLGATGHRSSPGQV 1463



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 13/180 (7%)

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  +  L ++ +V  G++H+L L  DG +VW+ G  + G+LG   T    TP  +  L  
Sbjct: 102 PVRLAALENIVSVVSGDAHSLALGADG-SVWTWGGNSSGQLGDGTTTDRATPMRVAGLDS 160

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH-----TPVLVTGLSSHQIVDVSI 479
             V  V AG   S+AL  DG V+ WG          H     TP  V GL+   +V ++ 
Sbjct: 161 --VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAA 216

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G    LA+ +   V AWGSN  GQ G D  S     P KV  L  +   ++ AG+  ++A
Sbjct: 217 GFDFTLAVLEDGTVRAWGSNGSGQLG-DGTSTQRLSPVKVSELSGIT--EVRAGTYHALA 273


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG       P PK +   A + ++ +  C
Sbjct: 356 DVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANM-NIELVAC 414

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G    G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 415 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 474

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 475 AIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 534

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    ++  G   +VALT
Sbjct: 535 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 594

Query: 442 WDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 595 TSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 654

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           G    G+ G  + ++    P+ V  L+D  VR +  G  F+ A  +
Sbjct: 655 GKGANGRLGHGD-TDDRSSPTLVESLKDKQVRTVVCGINFTAAICI 699


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 151/281 (53%), Gaps = 17/281 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH +  S+  P   +G L G+ +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKPEP---IGALAGQHIVHVACGESHSV 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G +++WG G  G+LG   ++   T P L+ +L+   +  +SCG  H L L+ DG 
Sbjct: 98  ALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ +++L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGK 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L S ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NSSGQLGL-SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAF-VPSSG 314



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 160/352 (45%), Gaps = 17/352 (4%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           +VYT G N   Q+  E  G    P       +I H+  G+  +  L   G +  +G G  
Sbjct: 54  EVYTCGLNTKGQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD 113

Query: 249 G-LANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G L  TTI+    +P+ +        L +S C   H L + ++G+ ++WG   +G+LG G
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTILQIS-CGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 305 NTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               SQ  P+ +   L G  + QV+AG +HS A++  G ++ WG+   G+LG  D + R 
Sbjct: 173 KECPSQASPQRVK-SLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           +P  V  L    V  +SCGE HT VL++ G  V++ G+G+ G+LGH+       P+ +  
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290

Query: 422 LRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIV 475
           L    V ++  G   ++A     G+++ +G G R    + HT     P  V G  +    
Sbjct: 291 LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNG 350

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCV 527
            +S G            +++ G  T   C +   S P D    + G    C+
Sbjct: 351 QLS-GKPDACKYHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINGTRYTCL 401



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 112/223 (50%), Gaps = 13/223 (5%)

Query: 293 WGVGEHGKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           WG    G+ G G+ L    P+  + G ++ + V +V+ G +HS  + EDG +YT G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH---E 408
           G+LGH    S+  P        +  V+CGESH++ LS  G  V+S G+G+ G+LG    E
Sbjct: 64  GQLGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQ-VFSWGAGSDGQLGLTTIE 122

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
           D   VT P++I+ L +  + ++  G    +AL  DG  F WG      LGL     S  +
Sbjct: 123 DA--VTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           P  V  L    +  V+ G +H  ALS    V+ WG N+ GQ G
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 9/176 (5%)

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
           +V  V+CG +H++ L +DG  V++ G    G+LGHE  G  + P+ I AL    +  V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHESEG--SKPEPIGALAGQHIVHVAC 91

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G S SVAL+  G VF WG      LGL +   +   P L+  L+   I+ +S G+ H LA
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           L+   + + WG N+ GQ G          P +V  L+ + + Q+ AG   S A ++
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL 207


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG       P PK +   A + ++ +  C
Sbjct: 312 DVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHM-NIELVAC 370

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G    G  GHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 371 GEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHT 430

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + +L +    +V  G  F+VALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALT 550

Query: 442 WDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       P  V G L  + + ++S G  HV  L+   EVY W
Sbjct: 551 TSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 610

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           G    G+ G  + ++  + P+ V  L+D  VR +  G  F+ A  +
Sbjct: 611 GKGANGRLGHGD-TDDRNSPTLVEALKDKQVRSVVCGINFTAAICI 655


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 193/449 (42%), Gaps = 35/449 (7%)

Query: 146 LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV----AHSKVYTWGCNLHHQI 201
              +N   LGD   ++S+T +  +  P     I    +          V  WG N   Q+
Sbjct: 230 WGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVRCWGANYSGQL 289

Query: 202 LDEVR-GKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQP 257
            + +  G+ +   +  LPS +  I AG + T  L  +GG+  +G    G LG   TT + 
Sbjct: 290 GNGLTFGRSTPGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARS 349

Query: 258 LPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
            P  V  L + + +++     + H   + S G V  WG  + G+LG G T ++  P  + 
Sbjct: 350 TPVAVSGLPSGVETIAAG---DYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVS 406

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVG 375
           G      VT ++AG  H+ A T  G ++ WG+   G+LG G      TP  V+ L S V 
Sbjct: 407 G--LPSGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVE 464

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            ++ G  HT  L+  G  VW  G  N G+LG   T    TP  +  L    V  + AG  
Sbjct: 465 TIAAGGWHTCALTGSGG-VWCWGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGV 522

Query: 436 FSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
            + ALT  G V+ WG          ++    TPV V+GL S  +  ++ GD H  AL+  
Sbjct: 523 HTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPS-GVTAIAAGDIHTCALTGS 581

Query: 491 NEVYAWGSNTMGQCGQD---NFSNPV---DQPSKVVGLEDVCVRQICA----GSLFSIAY 540
             V+ WG N  GQ G     N S PV     PS V  +    +R  CA    G ++   Y
Sbjct: 582 GGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIA-AGLRYTCALTGSGGVWCWGY 640

Query: 541 TVPPS-NSALSSAFTPLCVDVRPHTFTLI 568
            +    +   +S  TP+ V   P   T I
Sbjct: 641 NLSGQLDDGTTSRSTPVAVSGLPSGVTAI 669



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 152/330 (46%), Gaps = 20/330 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSK 275
            +  I AG   T    S+GG+  +G    G LG  + T    P  V  L + + +++   
Sbjct: 54  GVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAAGG 113

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
              AH   +TS GEV+ WG   +G+LG G+  ++  P  + G      VT ++AG  H+ 
Sbjct: 114 ---AHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSG--LPSGVTAIAAGGWHTC 168

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTV 394
           A T  G ++ WG    G+LG G    R TP  V+ L S+V A++ G++HT      G  V
Sbjct: 169 ARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVTAIAAGDAHTCARMSSGE-V 227

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL--- 451
           W  G  N G+LG       +TP  +  L    V  + AG   + ALT  G V  WG    
Sbjct: 228 WCWGGNNYGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVRCWGANYS 286

Query: 452 GLRSSSISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
           G   + ++F   TP  V+GL S  +  ++ GD H  AL+    V+ WG N  GQ G D  
Sbjct: 287 GQLGNGLTFGRSTPGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLG-DGT 344

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +     P  V GL    V  I AG   + A
Sbjct: 345 TTARSTPVAVSGLPSG-VETIAAGDYHTCA 373



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 168/375 (44%), Gaps = 23/375 (6%)

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDST 237
           G T    +   V+ WG N   ++ D      S P  +  LPS +  I AG   T  L S+
Sbjct: 63  GHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAAGGAHTCALTSS 122

Query: 238 GGLLVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           G +  +G    G LG  + T +  P  V  L + + +++       H    TS G V+ W
Sbjct: 123 GEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSGVTAIAAGG---WHTCARTSSGGVWCW 179

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G    G+LG G T  +  P  + G      VT ++AG +H+ A    G ++ WG  ++G+
Sbjct: 180 GGNYRGQLGDGTTTDRSTPVAVSG--LPSEVTAIAAGDAHTCARMSSGEVWCWGGNNYGQ 237

Query: 354 LGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           LG G      TP  V+ L S V A++ G  HT  L+  G  V   G+   G+LG+  T  
Sbjct: 238 LGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGG-VRCWGANYSGQLGNGLTFG 296

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
            +TP  +  L    V  + AG   + ALT  G V+ WG      LG   ++ +  TPV V
Sbjct: 297 RSTPGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLG-DGTTTARSTPVAV 354

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           +GL S  +  ++ GD H  AL     V  WG N  GQ G D  +     P  V GL    
Sbjct: 355 SGLPS-GVETIAAGDYHTCALMSSGGVRCWGHNDRGQLG-DGTTTARSTPVAVSGLPSG- 411

Query: 527 VRQICAGSLFSIAYT 541
           V  I AG L + A T
Sbjct: 412 VTAIAAGRLHTCART 426



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 154/342 (45%), Gaps = 25/342 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+ WG N   Q+ D      S P  +  L S +  I AG + T  L  +GG+  +G+ 
Sbjct: 429 GGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRN 488

Query: 246 --GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG  +T     P  V  L + + +++       H   +T  G V+ WG    G+LG
Sbjct: 489 NSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGG---VHTCALTGSGGVWCWGGNFAGQLG 545

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T  +  P  + G      VT ++AG  H+ A+T  G ++ WG  D G+LG G   +R
Sbjct: 546 DGTTTDRSTPVAVSG--LPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNR 603

Query: 363 HTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            TP  V+ L S V A++ G  +T  L+  G  VW  G    G+L  + T   +TP  +  
Sbjct: 604 STPVAVSGLPSGVTAIAAGLRYTCALTGSGG-VWCWGYNLSGQL-DDGTTSRSTPVAVSG 661

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  + AG  ++ A T  G V  WG      LG   ++    TPV V+GL S  + 
Sbjct: 662 LPS-GVTAIAAGGWYTCARTSSGGVRCWGANGSGQLG-DGTTTKRSTPVAVSGLPS-GVT 718

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN---FSNPVD 514
            ++ G  H  AL     V+ WG N  GQ G       + PVD
Sbjct: 719 AIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVD 760



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 164/367 (44%), Gaps = 25/367 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+ WG N   Q+ D      S P  +  LPS +  I AG   T    S+G +  +G  
Sbjct: 174 GGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVTAIAAGDAHTCARMSSGEVWCWGGN 233

Query: 246 --GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG  + T    P  V  L + + +++       H   +T  G V  WG    G+LG
Sbjct: 234 NYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGG---VHTCALTGSGGVRCWGANYSGQLG 290

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           +G T  +  P  + G      VT ++AG  H+ A+T  G ++ WG    G+LG G   +R
Sbjct: 291 NGLTFGRSTPGAVSG--LPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTAR 348

Query: 363 HTPTLVTEL-SDVGAVSCGESHTLVL-SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            TP  V+ L S V  ++ G+ HT  L S  G   W  G  + G+LG   T   +TP  + 
Sbjct: 349 STPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCW--GHNDRGQLGDGTTTARSTPVAVS 406

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  + AG   + A T  G V+ WG      LG  S + S  TPV V+GL+S  +
Sbjct: 407 GLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDS-STPVAVSGLAS-GV 463

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             ++ G  H  AL+    V+ WG N  GQ G  +    +  P  V GL    V  I AG 
Sbjct: 464 ETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHI-TPVAVSGLPSG-VTAIAAGG 521

Query: 535 LFSIAYT 541
           + + A T
Sbjct: 522 VHTCALT 528



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 109/226 (48%), Gaps = 11/226 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCG 380
           + VT ++AG  H+ A T  G ++ WG  D GRLG G      TP  V+ L S V A++ G
Sbjct: 53  QGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAAG 112

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            +HT  L+  G  VW  GS   G+LG       +TP  +  L    V  + AG   + A 
Sbjct: 113 GAHTCALTSSGE-VWCWGSNFYGQLGDGSYTTRSTPVAVSGLPS-GVTAIAAGGWHTCAR 170

Query: 441 TWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+ WG   R      ++    TPV V+GL S ++  ++ GD+H  A     EV+ 
Sbjct: 171 TSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPS-EVTAIAAGDAHTCARMSSGEVWC 229

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           WG N  GQ G  ++++    P  V GL    V  I AG + + A T
Sbjct: 230 WGGNNYGQLGDGSYTDS-STPVAVSGLPSG-VTAIAAGGVHTCALT 273



 Score = 67.8 bits (164), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV----AHSKVYTWGCNLHHQILDEVRGKC 209
           LGD  +++ +T +  +  P     I   DI          V+ WG N   Q+ D      
Sbjct: 544 LGDGTTTDRSTPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNR 603

Query: 210 SRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLAN--TTIQPLPKRVP-LE 265
           S P  +  LPS +  I AG   T  L  +GG+  +G    G  +  TT +  P  V  L 
Sbjct: 604 STPVAVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGLP 663

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + + +++       +    TS G V  WG    G+LG G T  +  P  + G      VT
Sbjct: 664 SGVTAIAAGG---WYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSG--LPSGVT 718

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELS 372
            ++AG  H+ A+   G ++ WG  D G+LG G    R TP  +VT  S
Sbjct: 719 AIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLYRTTPVDVVTSAS 766


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 168/332 (50%), Gaps = 22/332 (6%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSV 273
           LQS  +  R I A    +  + S G +   G  ++       Q  P ++P  + +VS+  
Sbjct: 43  LQSAQARDR-IAASSMNSLAIRSDGTVWTVGTRYVSANGWYRQDWPGQLPGLSGMVSI-- 99

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
               +   + V S+G V++WG  + G+LG G TLS R   + + GL G  VT V+ G +H
Sbjct: 100 -DSGDDFSMAVRSDGTVWAWGRNDDGQLGDG-TLSTRGDPVQVQGLSG--VTTVALGATH 155

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           S A+  DG ++ WG  DHG+LG G   +R TP +V  L +V AV+ G +H+L +  DG T
Sbjct: 156 SLALCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQEVVAVAAGANHSLAVLSDG-T 214

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           VW+ G    G+LG   T     P  I+ L    +  V +GTS S+AL +DG V+ WG   
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRVPVPIQGLSG--IVAVASGTSHSLALRYDGNVWAWGSNY 272

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
              LG   SS+S  +PV VT LS   IV V  G  + +A+     V+ WG NT GQ G D
Sbjct: 273 SGQLG-DGSSLSRSSPVQVTELSG--IVSVEGGPDYSMAVRYDGTVWTWGINTYGQLG-D 328

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +     P +  GL  V    + AG   ++A
Sbjct: 329 GTTIARSVPVQTSGLSGVVA--VAAGRTHALA 358



 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 28/351 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           A++ ++ WG N++ Q  DE R     PR  ++ + +  + A    +  + S GGL  +G 
Sbjct: 361 ANNSIWAWGGNVNGQRGDESRSVYFSPR--TILNEVVTMAATNDHSLAVRSDGGLWAWGA 418

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             +G LG   T  +  P  V     +VS++  +    H L V  +G +++WG    G+LG
Sbjct: 419 NNEGQLGDGTTKNRWAPAEV--LGNVVSVAAGR---RHSLAVRDDGSLWAWGSNTVGQLG 473

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T S R   + + G+ G  +  V+AG  +S A+  D  L+ WGE  +G+LG G   +R
Sbjct: 474 DG-TGSSRTIPMQVPGISG--IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNR 530

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           H PT V  LS + A++ G  H L +  +G TVW+ G  + G+LG   T    TP  ++ L
Sbjct: 531 HVPTRVQGLSGIVAIATGNGHMLAVRSNG-TVWAWGDNSSGQLGDGTTINRATPVQVQVL 589

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDV 477
                       + S+A+ +DG ++ WG+   S     + I    P  V G+ S   V V
Sbjct: 590 SGIVAVAAG--AAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGS--AVAV 645

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVC 526
           S    H LA+     ++ WG+N  GQ G  QDN +NP   PSKV  L  V 
Sbjct: 646 SAAKHHSLAVLADGTLWDWGANNYGQLGRNQDN-TNPT--PSKVTTLTGVT 693



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 174/363 (47%), Gaps = 32/363 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
             V+ WG N H Q+ D        P++ +    +  + AG   +  + S G +  +G+  
Sbjct: 163 GSVWAWGANDHGQLGDGTSIARRTPQMVAGLQEVVAVAAGANHSLAVLSDGTVWAWGENY 222

Query: 246 -GWLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            G LG   T  + +P  VP++    IV+++      +H L +  +G V++WG    G+LG
Sbjct: 223 DGQLGDGTTVTRRVP--VPIQGLSGIVAVA---SGTSHSLALRYDGNVWAWGSNYSGQLG 277

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G++LS+  P  +   L G  +  V  G  +S AV  DG ++TWG   +G+LG G   +R
Sbjct: 278 DGSSLSRSSPVQVTE-LSG--IVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTTIAR 334

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P   + LS V AV+ G +H L +  + +++W+ G    G+ G E      +P+ I   
Sbjct: 335 SVPVQTSGLSGVVAVAAGRTHALAMRAN-NSIWAWGGNVNGQRGDESRSVYFSPRTI--- 390

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               V  + A    S+A+  DG ++ WG      LG  ++   +  P  V G     +V 
Sbjct: 391 -LNEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRW-APAEVLG----NVVS 444

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           V+ G  H LA+     ++AWGSNT+GQ G D   +    P +V G+  +    + AGS +
Sbjct: 445 VAAGRRHSLAVRDDGSLWAWGSNTVGQLG-DGTGSSRTIPMQVPGISGIA--SVAAGSDY 501

Query: 537 SIA 539
           S+A
Sbjct: 502 SVA 504



 Score = 43.9 bits (102), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 14/109 (12%)

Query: 258 LPKRVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           +P+ VP +   +  +V+   ++ H L V ++G ++ WG   +G+LG     +   P  + 
Sbjct: 628 IPRLVPTQVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVT 687

Query: 317 G--------GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
                    G +G  +     G  HS A+  DG L  WG   +G+LG G
Sbjct: 688 TLTGVTEAVGTFGYSI-----GFGHSLALRSDGYLVGWGHNTYGQLGTG 731


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 153/281 (54%), Gaps = 17/281 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH +  S  +P+LI G L G+ +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS--KPELI-GALAGQHIVHVACGESHSV 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G +++WG G  G+LG   ++   T P L+ +L+   +  +SCG  H L L+ DG 
Sbjct: 98  ALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ +++L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGK 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L S ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NSSGQLGL-SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAF-VPSSG 314



 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 143/284 (50%), Gaps = 15/284 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +VYT G N   Q+  E  G  S+P L    +  +I H+  G+  +  L   G +  +G G
Sbjct: 54  EVYTCGLNTKGQLGHESEG--SKPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAG 111

Query: 247 WLG-LANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G L  TTI+    +P+ +        L +S C   H L + ++G+ ++WG   +G+LG
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQIS-CGNWHCLALAADGQFFTWGQNSYGQLG 170

Query: 303 HGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G    SQ  P+ +   L G  + QV+AG +HS A++  G ++ WG+   G+LG  D + 
Sbjct: 171 LGKECPSQASPQRVK-SLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R +P  V  L    V  +SCGE HT VL++ G  V++ G+G+ G+LGH+       P+ +
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 420 EALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRSSSISFHT 462
             L    V ++  G   ++A     G+++ +G G R    + HT
Sbjct: 289 LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           WG    G+ G G+ L    P+  + G ++ + V +V+ G +HS  + EDG +YT G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-- 407
           G+LGH    S+  P L+  L+   +  V+CGESH++ LS  G  V+S G+G+ G+LG   
Sbjct: 64  GQLGHESEGSK--PELIGALAGQHIVHVACGESHSVALSDQGQ-VFSWGAGSDGQLGLTT 120

Query: 408 -EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED   VT P++I+ L +  + ++  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 IEDA--VTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N+ GQ G
Sbjct: 179 ASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 9/176 (5%)

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
           +V  V+CG +H++ L +DG  V++ G    G+LGHE  G  + P++I AL    +  V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHESEG--SKPELIGALAGQHIVHVAC 91

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G S SVAL+  G VF WG      LGL +   +   P L+  L+   I+ +S G+ H LA
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLA 151

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           L+   + + WG N+ GQ G          P +V  L+ + + Q+ AG   S A ++
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL 207



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 17/247 (6%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
             +V++WG     Q+ L  +    + PRL  +     I  I  G +    L + G    +
Sbjct: 102 QGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTW 161

Query: 244 GK---GWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G+   G LGL      Q  P+RV     I  L+      AH   ++  G V+ WG    G
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220

Query: 300 KLGHGNTLSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +LG  +   +  P   KL    L  ++V  +S G  H+A +T+ G ++T+G G  G+LGH
Sbjct: 221 QLGLSDERDRESPCHVKL----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 357 GDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             +     P  V EL  S+V  ++CG  HTL        +++ G G  G+LG   T  V 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVK 336

Query: 415 TPKVIEA 421
            P  ++ 
Sbjct: 337 CPSPVKG 343


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 153/303 (50%), Gaps = 14/303 (4%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG      + LP+ + L  ++ S+S+  C  AHV+ +TS G+V++WG G  G+LGHG+
Sbjct: 26  GQLGTTKLQDELLPQLLSL-TSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGD 84

Query: 306 TLSQRRPKLIMGGLYGKRV-TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            L+   PKL+    +   V TQ +AG SHS  V++ G ++T G G  G+LGHGD  S  T
Sbjct: 85  ILNITLPKLVS--FFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLST 142

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH--EDTGKVTTPKVIE 420
           P  V+  ++  V  V+CG  H+LVL   G+ V   GSG  G+LG   +    V  P V+ 
Sbjct: 143 PAKVSHFNNDSVKMVACGMRHSLVLFA-GNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVS 201

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
            L+   V ++ A    S A++ DG  F WG G        H P  +   S     +V++G
Sbjct: 202 GLKDVEVVRISANGDHSAAISADGQFFSWGRGF-CGGPDVHAPQSLP--SPLSFREVAVG 258

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP--SKVVGLEDVCVRQICAGSLFSI 538
            +H L L+   EV+  GS    Q  +        +    KV   + V V QI AG+  S 
Sbjct: 259 WNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSA 318

Query: 539 AYT 541
           A T
Sbjct: 319 AVT 321



 Score =  100 bits (249), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 120/239 (50%), Gaps = 16/239 (6%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +V+SWG G  G+LG      +  P+L+ +  L    ++ ++ G +H  A+T  G ++TWG
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSL--PSISMLACGGAHVIALTSGGKVFTWG 73

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            G  G+LGHGD+ +   P LV+   D  +   + G SH+  +S  G  +++ G+G+ G+L
Sbjct: 74  RGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSG-CIFTCGNGSFGQL 132

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI- 458
           GH DT  ++TP  +       V+ V  G   S+ L     V  +G      LG  S  I 
Sbjct: 133 GHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIK 192

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
           S + P +V+GL   ++V +S    H  A+S   + ++WG    G CG  +   P   PS
Sbjct: 193 SVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG---RGFCGGPDVHAPQSLPS 248



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 9/208 (4%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTL--VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +++WG G  G+LG   L+    P L  +T L  +  ++CG +H + L+  G  V++ G G
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGK-VFTWGRG 75

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RS 455
           + G+LGH D   +T PK++       + +  AG S S  ++  G +F  G G        
Sbjct: 76  SSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHG 135

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSNPVD 514
            ++S  TP  V+  ++  +  V+ G  H L L   N+V  +GS   GQ G   +    V+
Sbjct: 136 DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVN 195

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P  V GL+DV V +I A    S A + 
Sbjct: 196 LPCVVSGLKDVEVVRISANGDHSAAISA 223



 Score = 57.8 bits (138), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 21/208 (10%)

Query: 126 THYQVDLIRS-ACLVYLILVTLADDNIKPLGDRKSSN---SNTDIDSTSTPKLTYNIGDT 181
           +H+  D ++  AC +   LV  A + +   G  K      S+  I S + P +   + D 
Sbjct: 147 SHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV 206

Query: 182 DI-SVAHSKVYTWGCNLHHQILDEVRGKCSRPRL---QSLPS--NIRHIEAGQFCTFLLD 235
           ++  ++ +  ++   +   Q     RG C  P +   QSLPS  + R +  G     LL 
Sbjct: 207 EVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALLLT 266

Query: 236 STGGLLVYG--------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
             G +   G        K  L + ++  + L ++VP    +  + ++  +E H   VT  
Sbjct: 267 VDGEVFKLGSTLNKQPEKQQLQIDSS--EALFEKVPDFDGVKVMQIAAGAE-HSAAVTEN 323

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           GEV +WG GEHG+LG GNT  Q  P+L+
Sbjct: 324 GEVKTWGWGEHGQLGLGNTNDQTSPELV 351



 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 20/144 (13%)

Query: 234 LDSTGGLLVYGKGWLGLANT-TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           + + G    +G+G+ G  +    Q LP  +      V  +       H L +T +GEV+ 
Sbjct: 221 ISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWN-------HALLLTVDGEVFK 273

Query: 293 WGV-------GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
            G         +  ++     L ++ P        G +V Q++AG  HSAAVTE+G + T
Sbjct: 274 LGSTLNKQPEKQQLQIDSSEALFEKVPDF-----DGVKVMQIAAGAEHSAAVTENGEVKT 328

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVT 369
           WG G+HG+LG G+   + +P LV+
Sbjct: 329 WGWGEHGQLGLGNTNDQTSPELVS 352


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 144/281 (51%), Gaps = 19/281 (6%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N++   +P+  P++A +  L V +  C ++H L +T++GEV  WG
Sbjct: 88  VYSWGWGDFGRLGHGNSSDLFIPQ--PIKA-LKGLEVKQIACGDSHCLAITTDGEVLGWG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G+T     P  +     G  V  ++AG  H+ AVTE+G LY WG G +G L
Sbjct: 145 RNQNGQLGLGHTEDVLTPHKLTA-FEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD + R  P  V  ++   +  V+CG  HT+ +++ G+ +++ G    G+LGH D   
Sbjct: 204 GLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGN-MYTFGWSKYGQLGHGDFAD 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVT 467
              P  ++AL+  +++ +  G   + AL  DG ++ WG          +T     P LV 
Sbjct: 263 HLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVK 322

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           GL    +  V  G  H LA++    VY+WG  T GQ G  +
Sbjct: 323 GLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGD 363



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 11/210 (5%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           ++V  +SAG SHS A+    L+ +WG G+ G+LGHGD + RH PT+V+ L D  + +V+C
Sbjct: 14  RQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTC 73

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT  LS    TV+S G G+ G+LGH ++  +  P+ I+AL+   V+++  G S  +A
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLA 133

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T DG V  WG      LGL  +     TP  +T      +  ++ G  H  A+++  ++
Sbjct: 134 ITTDGEVLGWGRNQNGQLGLGHTEDVL-TPHKLTAFEGVAVKMLAAGAEHTTAVTENGKL 192

Query: 494 YAWGSNTMGQCGQDNFSNPV--DQPSKVVG 521
           Y WG    G  G  +  + +  DQ + V G
Sbjct: 193 YGWGWGRYGNLGLGDREDRLVPDQVAAVAG 222



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 132/270 (48%), Gaps = 13/270 (4%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H + + S   V SWG GE G+LGHG+   +  P ++   L    ++ V+ G  H+ A++
Sbjct: 24  SHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVS-ALDDCEISSVTCGADHTTALS 82

Query: 339 ED-GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
                +Y+WG GD GRLGHG+      P  +  L   +V  ++CG+SH L ++ DG  + 
Sbjct: 83  NSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVL- 141

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
             G    G+LG   T  V TP  + A     V+ + AG   + A+T +G ++ WG G R 
Sbjct: 142 GWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWG-RY 200

Query: 456 SSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            ++          P  V  ++   +  V+ G  H + +++   +Y +G +  GQ G  +F
Sbjct: 201 GNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDF 260

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           ++ +  P +V  L+   ++ I  G   + A
Sbjct: 261 ADHL-IPHQVQALKSKKIQAITGGWRHTFA 289



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 12/209 (5%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           ++ + AG   T  +   G L  YG GW     LGL +   + +P +V   A  + + +  
Sbjct: 173 VKMLAAGAEHTTAVTENGKL--YGWGWGRYGNLGLGDREDRLVPDQVAAVAGEL-MKMVA 229

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V   G +Y++G  ++G+LGHG+      P  +   L  K++  ++ G  H+ 
Sbjct: 230 CGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQA-LKSKKIQAITGGWRHTF 288

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           A+  DG LY WG    G++G G+ + + +P LV  L D  V  V CG  HTL ++  G+ 
Sbjct: 289 ALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGN- 347

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           V+S G G  G+LGH DT   +TPK IE L
Sbjct: 348 VYSWGRGTSGQLGHGDTVDRSTPKRIEIL 376



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 126/279 (45%), Gaps = 11/279 (3%)

Query: 271 LSVSKCSEAHVLTVT-SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
           +S   C   H   ++ S   VYSWG G+ G+LGHGN+     P+ I   L G  V Q++ 
Sbjct: 68  ISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKA-LKGLEVKQIAC 126

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL 387
           G SH  A+T DG +  WG   +G+LG G  +   TP  +T    V    ++ G  HT  +
Sbjct: 127 GDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAV 186

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           +++G  ++  G G  G LG  D      P  + A+    ++ V  G   ++ +   G ++
Sbjct: 187 TENG-KLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMY 245

Query: 448 WWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
            +G      L     + H  P  V  L S +I  ++ G  H  AL     +Y WG N  G
Sbjct: 246 TFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFG 305

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           Q G  N  +    P  V GL+D  V  +  G   ++A T
Sbjct: 306 QVGCGNTEDQ-SSPQLVKGLQDQVVTVVQCGWRHTLAMT 343



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNI-RHIEAGQFCTFLLDSTGGLLVYG 244
           + K+Y WG   +  + L +   +    ++ ++   + + +  G   T  +  +G +  +G
Sbjct: 189 NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFG 248

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHG 299
               G LG  +     +P +V    A+ S  +   +    H   + S+G +Y WG  + G
Sbjct: 249 WSKYGQLGHGDFADHLIPHQVQ---ALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFG 305

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           ++G GNT  Q  P+L+ G L  + VT V  G  H+ A+T+ G +Y+WG G  G+LGHGD 
Sbjct: 306 QVGCGNTEDQSSPQLVKG-LQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDT 364

Query: 360 KSRHTPTLVTELSDVG 375
             R TP  +  LS  G
Sbjct: 365 VDRSTPKRIEILSSDG 380


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 178/381 (46%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           RP   ++  ++  I  G     L+   G +  +G+   G LG         PK V    A
Sbjct: 243 RPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEF-LA 301

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + ++    C E H   V++ G+++SWG G H  G LGHG+ +S   PK + G L G +V 
Sbjct: 302 LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVL 361

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESH 383
            V+ G  HSA  T +G L+T+G+G  G LGHG+ +S   P  V  L+ +    V+C   H
Sbjct: 362 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 421

Query: 384 TL----VLSQDG-----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
           T     V+ Q G       +++ G G+  +LGH +      P  + +L  +   K+  G 
Sbjct: 422 TAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGH 481

Query: 435 SFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
           +F+VALT  G VF  G    G   +SIS    P LV   L    + +++ GD HV  L+ 
Sbjct: 482 TFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTS 541

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  V+ +  GS F+ +  +   +  +
Sbjct: 542 RSEVFTWGKGANGRLGHGDTEDK-RTPTCVEALRDRHVKSLSCGSNFTSSICI---HKWV 597

Query: 550 SSAFTPLCVDVRPHTFTLIRE 570
           S A   +C   R   F   R+
Sbjct: 598 SGADQSICSGCR-QAFGFTRK 617



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 75/326 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG  +  ++   ++   SRP+L    +  NI  +  G++ T ++ ++G L  +G
Sbjct: 269 QGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWG 328

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PLE   V LSV+ C   H    T+ G+++++G G 
Sbjct: 329 DGIHNVGLLGHGSDISHWIPKRVSGPLEGLQV-LSVA-CGTWHSALATANGKLFTFGDGA 386

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYTWG 347
            G LGHGN  S   PK +   L G +  +V+    H+AA+ E             L+TWG
Sbjct: 387 FGVLGHGNRESVSYPKEVQS-LNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWG 445

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT------------ 393
           +GD  RLGHG+ ++   PT V+ L D     ++CG + T+ L+  GH             
Sbjct: 446 DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505

Query: 394 ---------------------------------------VWSMGSGNLGKLGHEDTGKVT 414
                                                  V++ G G  G+LGH DT    
Sbjct: 506 NSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 565

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVAL 440
           TP  +EALR   V+ +  G++F+ ++
Sbjct: 566 TPTCVEALRDRHVKSLSCGSNFTSSI 591


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 161/320 (50%), Gaps = 29/320 (9%)

Query: 246 GWLGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG      + LP+   +P  ++   +S+  C  AHVL +T++G+V +WG G  G+LGH
Sbjct: 23  GQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGTSGQLGH 82

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+ +S  +PK +   L    +T VSAG SHS  V++ G L+T G+G  G+LGHGD KS  
Sbjct: 83  GDMVSSLQPKHVKL-LESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHGDCKSHC 141

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKVI 419
           +P  V+      V  ++CG  H+LVL + G  V+  GSG  G+LG   ++T  ++ P+  
Sbjct: 142 SPVKVSYFDSKHVDQIACGMRHSLVLLK-GDQVYGFGSGKRGQLGVSMDNTRSISVPQAT 200

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
             L    +  + A    S AL+ +G ++ WG G  S+S   H P  +   SS     V++
Sbjct: 201 VGLEGVEIISIDANGDHSAALSANGHLYTWGRGFGSTS-DVHCPRCLP--SSLCFTQVAL 257

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS------------------KVVG 521
           G +H+L L+   EV+  G N  G  G     + V   S                  KV G
Sbjct: 258 GWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEKVQG 317

Query: 522 LEDVCVRQICAGSLFSIAYT 541
           L+ + V QI AG+  S   T
Sbjct: 318 LDGLNVVQIAAGAEHSALVT 337



 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 39/256 (15%)

Query: 143 LVTLADDNIKPLG--DRKSSNSNTDI---DSTSTPKLTYNIGDTDISVAHSKVYTWGCNL 197
           L T  D +   LG  D KS  S   +   DS    ++   +  + + +   +VY +G   
Sbjct: 121 LFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGK 180

Query: 198 HHQI---LDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGL 250
             Q+   +D  R   S P+    L+ +   I  I+A    +  L + G L  +G+G    
Sbjct: 181 RGQLGVSMDNTR-SISVPQATVGLEGV--EIISIDANGDHSAALSANGHLYTWGRG---F 234

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-------- 302
            +T+    P+ +P       +++      H+L +T  GEV+  G   HG LG        
Sbjct: 235 GSTSDVHCPRCLPSSLCFTQVALGW---NHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQV 291

Query: 303 ----------HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
                     HG   S+      + GL G  V Q++AG  HSA VTE+ ++ TWG G+HG
Sbjct: 292 KHLSVIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHG 351

Query: 353 RLGHGDLKSRHTPTLV 368
           +LG G+   + +P  V
Sbjct: 352 QLGLGNTYDQISPQAV 367


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 142/291 (48%), Gaps = 21/291 (7%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           +++ +  C E H   VT  G++Y+WG G +  G LGHGN +S   PK + G L G  V+ 
Sbjct: 356 INIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 415

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHT 384
           +S G  H+A VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT
Sbjct: 416 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 475

Query: 385 LVLSQ-----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
             + +               +++ G G+ G+LGH D      P  + AL +    +V  G
Sbjct: 476 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACG 535

Query: 434 TSFSVALTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            S +VALT  G V+  G      L +       P  V G LS   + +++ G  HV  L+
Sbjct: 536 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLT 595

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              EVY WG    G+ G  + ++  + PS V  L+D  V+ I  G+ F+ A
Sbjct: 596 SKTEVYTWGKGANGRLGHGD-TDDRNFPSLVEALKDKQVKSIACGTNFTAA 645



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 155/329 (47%), Gaps = 32/329 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++   V      P+L  SL + NI  +  G++ T  +  +G L  +G
Sbjct: 322 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWG 381

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 382 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS-SIS-CGPWHTAVVTSSGQLFTFGDGT 439

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 440 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 498

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD +++  PT V  L   +   V+CG S T+ L+  GH V++MGS   G
Sbjct: 499 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYG 557

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           +LG+         +V   L K  V ++  G      LT    V+ WG G         + 
Sbjct: 558 QLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTD 617

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             + P LV  L   Q+  ++ G +   A+
Sbjct: 618 DRNFPSLVEALKDKQVKSIACGTNFTAAI 646



 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 136/302 (45%), Gaps = 32/302 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+ +V L V    C   H   VT +GEV+SWG    G+LGHG       PKLI
Sbjct: 294 LPK--ALESTVV-LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 350

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---E 370
              L    +  V+ G  H+ AVT  G LYTWG+G +  G LGHG+  S   P  V    E
Sbjct: 351 -DSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 409

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V ++SCG  HT V++  G  +++ G G  G LGH D   V+ P+ +E+L+  R  + 
Sbjct: 410 GIHVSSISCGPWHTAVVTSSGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 468

Query: 431 CAGTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         +   P  V  L    
Sbjct: 469 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 528

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +AL+    VY  GS   GQ G       +  P++V G L    V +I  
Sbjct: 529 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL--PNRVEGRLSKSFVEEIAC 586

Query: 533 GS 534
           G+
Sbjct: 587 GA 588



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 24/241 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGE 381
           V  ++ G  H+A VT+ G +++WGE   GRLGHG       P L+  LS++    V+CGE
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGE 365

Query: 382 SHT--LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSV 438
            HT  + LS D +T W  G+ N G LGH +      PK +   L    V  +  G   + 
Sbjct: 366 YHTCAVTLSGDLYT-WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 424

Query: 439 ALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ---- 489
            +T  G +F +G G           S   P  V  L   + V  + G  H  A+ +    
Sbjct: 425 VVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 484

Query: 490 --------YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                     +++ WG    G+ G  +    +  P+ V  L +    Q+  G   ++A T
Sbjct: 485 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCQVACGHSLTVALT 543

Query: 542 V 542
            
Sbjct: 544 T 544


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 161/343 (46%), Gaps = 25/343 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG    +    PK V       ++ +  C
Sbjct: 309 DVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDA-LGNTNIELVSC 367

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G +  G LGHGN +S   PK I G L G  V+ ++ G  H+
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHT 427

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVMV 487

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL      +V  G S +VALT
Sbjct: 488 GSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALT 547

Query: 442 WDGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G  +     + H     PV V G LS   + +++ G  HV  L+   EVY W
Sbjct: 548 TSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTW 607

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+ A
Sbjct: 608 GKGANGRLGHGD-TDDRNSPTLVEALKDKQVKSIACGTNFTAA 649



 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 139/302 (46%), Gaps = 32/302 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+A+V L V    C   H   VT +GE+++WG    G+LGHG      +PKL+
Sbjct: 298 LPK--ALESAVV-LDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLV 354

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---E 370
              L    +  VS G  H+ AVT  G LYTWG+G +  G LGHG+  S   P  +    E
Sbjct: 355 -DALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLE 413

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V +++CG  HT V++  G  +++ G G  G LGH D G VT P+ +E+L+  R  + 
Sbjct: 414 GIHVSSIACGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRA 472

Query: 431 CAGTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         +   P  V  L    
Sbjct: 473 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPN 532

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              VS G S  +AL+    VY  GS   GQ G  +    V  P +V G L    V +I  
Sbjct: 533 FCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKV--PVRVEGKLSKSFVEEIAC 590

Query: 533 GS 534
           G+
Sbjct: 591 GA 592



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 143/328 (43%), Gaps = 77/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +++TWG     ++   V     +P+L      +NI  +  G++ T  +  +G L  +G
Sbjct: 326 QGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWG 385

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PK++  PLE   + +S   C   H   VTS G+++++G G 
Sbjct: 386 DGTYNFGLLGHGNEVSHWIPKKINGPLEG--IHVSSIACGPWHTAVVTSAGQLFTFGDGT 443

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 444 FGVLGHGDRGSVTMPREVES-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 502

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT---------- 393
           WG+GD GRLGHGD +++  PT V  L D     VSCG S T+ L+  GH           
Sbjct: 503 WGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQ 562

Query: 394 -----------------------------------------VWSMGSGNLGKLGHEDTGK 412
                                                    V++ G G  G+LGH DT  
Sbjct: 563 LGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 622

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             +P ++EAL+  +V+ +  GT+F+ A+
Sbjct: 623 RNSPTLVEALKDKQVKSIACGTNFTAAI 650


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  132 bits (331), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 161/346 (46%), Gaps = 25/346 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG       P PK +   A + ++ +  C
Sbjct: 311 DVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANM-NIELVAC 369

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G    G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHT 429

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 430 AIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 489

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    ++  G   +VALT
Sbjct: 490 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALT 549

Query: 442 WDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 550 TSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 609

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           G    G+ G  + ++    P+ V  L+D  VR +  G  F+ A  +
Sbjct: 610 GKGANGRLGHGD-TDDRSSPTLVEALKDKQVRTVVCGINFTAAICI 654


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 167/372 (44%), Gaps = 27/372 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           +++ I  G     L    G +  +G+   G LG         PK V    A+ ++    C
Sbjct: 255 DVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVE-SLAVSNVEYIAC 313

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT+ G++Y+WG G +  G LGHG   S   PK + G L G +V  V+ G  HS
Sbjct: 314 GEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHS 373

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL----S 388
           A     G ++T+G+G  G LGHG+ ++   P  V  LS      V+CG  H+  +    S
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTS 433

Query: 389 QDG-----HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           Q G       +++ G G+  +LGH D      P V++AL      +V  G S ++AL   
Sbjct: 434 QTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATS 493

Query: 444 GLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G VF  G      L +       P  V   LSS  + ++S G  HV  L+  +EVY WG 
Sbjct: 494 GHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGM 553

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
              G+ G     +   +P+ V  L+D  V+ I  GS F+    +   +  +S A   +C 
Sbjct: 554 GANGRLGHGGIEDK-KKPTIVDALKDRHVKSIACGSNFTTCICI---HKWVSGADQSVCS 609

Query: 559 DVR-PHTFTLIR 569
             R P  FT  R
Sbjct: 610 GCRQPFGFTRKR 621


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 163/319 (51%), Gaps = 18/319 (5%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           IV +  S   E HV+ +T+ G+V+S+G    G+LGHG+  S   PK +   L  K VT V
Sbjct: 66  IVKIFASNGCE-HVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEA-LSRKFVTAV 123

Query: 328 SAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHT 384
              + H+     D + +Y+ G  D+G+LG G+L  +++PTL+  L+   + ++ CG+ H+
Sbjct: 124 GCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHS 183

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +V S DG  ++S G  + G+LG   + G ++ PK ++ L+     ++  G   +VA+  +
Sbjct: 184 VVSSIDGE-IFSFGRNDSGQLGITGSDGNISLPKEVKNLKS---TQIACGYYHTVAIN-N 238

Query: 444 GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           G ++ WG      LG+   S     P LV  L   +IV V+ G  H LAL    +++++G
Sbjct: 239 GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFG 298

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
            N+ GQ G D  +N   +P  + GL D  V QI AG   SI    P   + L   F  L 
Sbjct: 299 RNSHGQLG-DGTTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLANPVIRNPLVEDFKQLL 357

Query: 558 VDVRPHTFTLIREFLEQYS 576
            +      T I E  + Y+
Sbjct: 358 NNQELSDVTFIVEGKKLYA 376



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 21/248 (8%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIG----DTDISVAHS-KVYTWGCNLHHQI-LDEVRGK 208
           GD+ S NS   +++ S  K    +G     T  S A   ++Y+ G N + Q+ L  +  K
Sbjct: 101 GDQTSINSPKQVEALSR-KFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDK 159

Query: 209 CSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQ-PLPKRVP 263
            S   +++L    I  I  GQ+ + +    G +  +G+   G LG+  +     LPK V 
Sbjct: 160 NSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVK 219

Query: 264 -LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
            L++  ++     C   H + + + G++YSWG  + G+LG G   ++     ++  L  +
Sbjct: 220 NLKSTQIA-----CGYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQ 273

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCG 380
            +  V+ G  H+ A+   G L+++G   HG+LG G   +   P L+  L D  V  ++ G
Sbjct: 274 EIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG 333

Query: 381 ESHTLVLS 388
             H++VL+
Sbjct: 334 FYHSIVLA 341


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 153/306 (50%), Gaps = 28/306 (9%)

Query: 244  GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G G LG   +    +P +V     +  + +    E H + + S+G +++WG   +G+LG 
Sbjct: 732  GHGQLGTGTSNSTSVPGKV---INLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGD 788

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
             +T ++  P  +         T VSAG +HS A+  DG ++ +G   +G+LG G   S+ 
Sbjct: 789  DSTTTRYSPVQVS---TLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQR 845

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            TP  V +L+ V A++ G+  +L L  DG TVWS G    G+LG+  T + + P  +  L 
Sbjct: 846  TPVQVKDLTGVVAIAAGKDFSLALKSDG-TVWSWGQNTYGELGNGTTTRSSVPVQVALLT 904

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL--VTGLSSHQIV 475
               V+ + AG    VAL  DG VF WG      LG  SS+IS  TPV   VTG     I 
Sbjct: 905  D--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELG-NSSTISQSTPVQSGVTG-----IK 956

Query: 476  DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             ++ G  H LAL     V++WG N  GQ G  +N S  V  P+ + GL  +    I AG 
Sbjct: 957  GIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSV--PAAIPGLASIA--SIAAGE 1012

Query: 535  LFSIAY 540
              SIAY
Sbjct: 1013 NQSIAY 1018



 Score =  131 bits (329), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 137/257 (53%), Gaps = 20/257 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + + S+G V+ WG   HG+LG G + S   P  ++  L G ++  ++ G +H+ A+  
Sbjct: 715 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVIN-LTGMKM--IAGGENHTVALRS 771

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG L+TWG   +G+LG     +R++P  V+ L++  AVS GE+H+L L  DG TVW+ G 
Sbjct: 772 DGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDG-TVWAFGY 830

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T    TP  ++ L    V  + AG  FS+AL  DG V+ WG      LG 
Sbjct: 831 NGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGN 888

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF---S 510
            +++ S   PV V  L+   +  ++ GD H +AL +   V+AWG N  G+ G  +    S
Sbjct: 889 GTTTRS-SVPVQVALLT--DVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQS 945

Query: 511 NPVDQPSKVVGLEDVCV 527
            PV   S V G++ +  
Sbjct: 946 TPVQ--SGVTGIKGIAA 960



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 29/344 (8%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
            V+ WG N H Q+        S P      + ++ I  G+  T  L S G L  +G    G
Sbjct: 725  VWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYG 784

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG  +TT +  P +V   + + + +     E H L + S+G V+++G   +G+LG G T
Sbjct: 785  QLGDDSTTTRYSPVQV---STLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTT 841

Query: 307  LSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
             SQR P   K + G      V  ++AG   S A+  DG +++WG+  +G LG+G      
Sbjct: 842  SSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSS 895

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
             P  V  L+DV A++ G+ H + L +DG +V++ G    G+LG+  T   +TP V   + 
Sbjct: 896  VPVQVALLTDVKAIAAGDYHGVALKKDG-SVFAWGYNGNGELGNSSTISQSTP-VQSGVT 953

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
               ++ + AG   ++AL  DG V+ WG      LG   ++ S   P  + GL+S  I  +
Sbjct: 954  G--IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG-NGNNTSRSVPAAIPGLAS--IASI 1008

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            + G++  +A      +Y+WG N  GQ G     +  + P KV+G
Sbjct: 1009 AAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD-TNVPHKVIG 1051


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 145/281 (51%), Gaps = 21/281 (7%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYS 292
           L VY  GW     LG  N++    P+ V    A+  L + +  C ++H L VT  G+V S
Sbjct: 86  LQVYSWGWGDFGRLGHGNSSDVFTPQPV---KALQGLKIKQIACGDSHCLAVTMAGQVQS 142

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G T     P+ I     G  V  ++AG  H+AAVTEDG LY WG G +G
Sbjct: 143 WGRNQNGQLGLGTTEDSLLPQKIQA-FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYG 201

Query: 353 RLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  V+  E   +  V+CG  HT+ +S  G+ +++ G    G+LGH D 
Sbjct: 202 NLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN-LYTYGWSKYGQLGHGDF 260

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
                P  +EAL+   + ++  G   ++ALT +G ++ WG      +G+ ++     +PV
Sbjct: 261 EDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNND-DHCSPV 319

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            V      +I  V+ G  H LALS+   V++WG  T GQ G
Sbjct: 320 QVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG 360



 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 18/299 (6%)

Query: 252 NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
           ++ +  +P   P    +VS   S     H + + +   + SWG GE G+LGHG+   +  
Sbjct: 2   DSVMAAVPDSPPQTVVLVSAGAS-----HSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV 56

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           P  ++ G     +T V  G  H+ A +ED L +Y+WG GD GRLGHG+     TP  V  
Sbjct: 57  P-TVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA 115

Query: 371 LSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           L    +  ++CG+SH L ++  G  V S G    G+LG   T     P+ I+A     V+
Sbjct: 116 LQGLKIKQIACGDSHCLAVTMAGQ-VQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVK 174

Query: 429 KVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDS 482
            + AG   + A+T DG ++ WG G R  ++          P  V+ +   ++V V+ G  
Sbjct: 175 MIAAGAEHTAAVTEDGDLYGWGWG-RYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWR 233

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           H + +S    +Y +G +  GQ G  +F + +  P K+  L+D  + QI  G   ++A T
Sbjct: 234 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDSTISQISGGWRHTMALT 291



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 121/245 (49%), Gaps = 16/245 (6%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+     ++ I AG   T  +   G L  YG 
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDL--YGW 195

Query: 246 GW-----LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           GW     LGL +   + LP++V  +E   + L    C   H +TV+  G +Y++G  ++G
Sbjct: 196 GWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVA--CGWRHTITVSDSGNLYTYGWSKYG 253

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHG+      P  +   L    ++Q+S G  H+ A+T +G LY WG    G++G G+ 
Sbjct: 254 QLGHGDFEDHLVPHKLEA-LKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNN 312

Query: 360 KSRHTPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
               +P  V   E   +  V+CG  HTL LS+    V+S G G  G+LG+ +     TP 
Sbjct: 313 DDHCSPVQVHFPEDQKISQVACGWRHTLALSEK-KNVFSWGRGTSGQLGNGEIVDRNTPV 371

Query: 418 VIEAL 422
           +I+AL
Sbjct: 372 LIDAL 376



 Score = 67.0 bits (162), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 17/173 (9%)

Query: 217 LPSNIRHIEA--------GQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           LP  +  +E         G   T  +  +G L  YG    G LG  +     +P ++   
Sbjct: 213 LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKL--- 269

Query: 266 AAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+   ++S+ S    H + +TSEG++Y WG  + G++G GN      P  +      ++
Sbjct: 270 EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF-PEDQK 328

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA 376
           ++QV+ G  H+ A++E   +++WG G  G+LG+G++  R+TP L+  LS  G+
Sbjct: 329 ISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGS 381


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 170/374 (45%), Gaps = 31/374 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEA-AIVSLSVSK 275
           +++ I  G     L    G +  +G+   G LG         PK V  EA A+ ++    
Sbjct: 256 DVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLV--EALAVSNVEYIA 313

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT+ G++Y+WG G +  G LG+G   S   PK + G L G +V  VS G  H
Sbjct: 314 CGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWH 373

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDG 391
           SA  T  G ++T+G+G  G LGHG  ++   P  V  LS      V+CG  H+  + +  
Sbjct: 374 SALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESS 433

Query: 392 HTV---------WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           + V         ++ G+G+  +LGH D      P  +++L  +   +V  G S ++AL+ 
Sbjct: 434 NHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALST 493

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF  G      LG   S      PV    LS   + ++S G  HV  L+  +EVY W
Sbjct: 494 SGHVFTMGSSSNGQLGNPKSDGKQPIPVQ-DRLSGELVEEISCGSCHVAVLTSRSEVYTW 552

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G     +   +P+ V  L+D  V+ I  GS F+    +   +  +S A   +
Sbjct: 553 GMGANGRLGHGGVEDK-KKPTLVEALKDRHVKSIACGSNFTTCICI---HKWVSGADQSV 608

Query: 557 CVDVR-PHTFTLIR 569
           C   R P  FT  R
Sbjct: 609 CSGCRQPFGFTRKR 622


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 166/347 (47%), Gaps = 33/347 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
            ++V+TWG     ++         +PRL +SL   N+  I  G+F T  + +TG L  +G
Sbjct: 280 QAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWG 339

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +T    +PKRV  PLE   + +S   C   H   +TS G++Y++G G 
Sbjct: 340 DGTHNAGLLGHGSTVSHWIPKRVSGPLEG--LQVSTVSCGTWHTALITSSGQLYTFGDGT 397

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------DGLLYTWGE 348
            G LGHGN  +   PK +   L G R   VS G  HSAAV E          G L+TWG+
Sbjct: 398 FGALGHGNRETISYPKEVES-LKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGD 456

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           GD  RLGHGD  ++  PT V  L D      +CG + T+ L+  GH ++++GS   G+LG
Sbjct: 457 GDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGH-MFTVGSSVYGQLG 515

Query: 407 H-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA-LTWDGLVFWWGLG----LRSSSIS- 459
           +  + G+   P+++E           A  S+ VA LT  G V+ WG G    L    I+ 
Sbjct: 516 NPNNDGRY--PRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIAD 573

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              P LV  L    +  ++ G S   A+SQ+  V     +    C Q
Sbjct: 574 RKVPTLVEALRDRSVKRIACGSSFTAAISQHKWVSGVEQSQCSACRQ 620



 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 164/338 (48%), Gaps = 23/338 (6%)

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNT 306
           G   +  QP   R+    +I ++ +  C E H   VT+ G++Y+WG G H  G LGHG+T
Sbjct: 297 GAGTSIFQP---RLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGST 353

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +S   PK + G L G +V+ VS G  H+A +T  G LYT+G+G  G LGHG+ ++   P 
Sbjct: 354 VSHWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPK 413

Query: 367 LVTELSDVG--AVSCGESHT-----LVLSQDGHT---VWSMGSGNLGKLGHEDTGKVTTP 416
            V  L  +   +VSCG  H+     ++++Q   +   +++ G G+  +LGH D      P
Sbjct: 414 EVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKP 473

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSS 471
             + +L  +   K   G + ++ LT  G +F  G      L + +     P LV   +  
Sbjct: 474 TCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRYPRLVEDKVGG 533

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +V+V+ G  HV  L+   EVY WG    G+ G  + ++    P+ V  L D  V++I 
Sbjct: 534 GGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIAD-RKVPTLVEALRDRSVKRIA 592

Query: 532 AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            GS F+ A +     S +  +    C   +P  FT  R
Sbjct: 593 CGSSFTAAISQHKWVSGVEQSQCSAC--RQPFGFTRKR 628


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 146/286 (51%), Gaps = 18/286 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S++RP+ + G L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKRPEQV-GALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
            + + G +Y WG    G+LG  G  +    P  +  LSDV    V+CG  H+L LS+ G 
Sbjct: 98  TLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   D  K T+P++I++L      ++ AG + S ALT  G VF WG 
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +S G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSS 551
            ++  + ++ P KV  L    V QI  G   + A+   PS   + S
Sbjct: 276 HNSTGHEIN-PRKVFELMGNIVTQIACGRQHTSAFV--PSTGRIYS 318



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 17/274 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVYG- 244
           VYT GCN   Q+  E     SR R + + +    NI  +  G+  T  L+  G +  +G 
Sbjct: 55  VYTCGCNDLGQLGHEK----SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGF 110

Query: 245 --KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G LGL  T     +P+ +   + +  + V+ C   H L ++   EV+SWG  +HG+L
Sbjct: 111 AADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA-CGYYHSLALSKGSEVFSWGQNKHGQL 169

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G  L ++    ++  L G    Q++AG +HS A+T  G ++ WG    G+LG  D   
Sbjct: 170 GLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEND 229

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KV 418
           R+ P L+  L    +  +SCGE HT  L+++G  V++ G+G  G+LGH  TG    P KV
Sbjct: 230 RYVPNLLKSLRSQKIVYISCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTGHEINPRKV 288

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            E +     +  C     S  +   G ++ +GLG
Sbjct: 289 FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 97/210 (46%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGDLKS-------RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G +         R    L   + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++ L   G V+ WG      LG
Sbjct: 60  CNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   QI AG   S A T+
Sbjct: 178 QTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 19/209 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSS--NSNTDIDSTSTPKLTYNI-----GDTD 182
           V +++ AC  Y  L       +   G  K        D+   ++P+L  ++     G   
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 183 ISVAHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
              AHS        V+ WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
           YS+G+G +G+LG G+T +++ P  + G  
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 21/287 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 242 CGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWH 301

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +  
Sbjct: 302 TALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM 361

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +    +V  G   +VAL
Sbjct: 362 SVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVAL 421

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L ++      PV V G L  + + ++S G  HV  L+   EVY 
Sbjct: 422 TTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYT 481

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           WG    G+ G  +  +  + P+ V  L+D  VR +  G  F+ A  +
Sbjct: 482 WGKGANGRLGHGDTEDK-NTPTLVEALKDKQVRNVVCGINFTAAICI 527



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 144/313 (46%), Gaps = 30/313 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTIQPLPKRV--PLEAAIVSLS 272
           NI  +  G++ T  +  +G L  +G G      LG  N     +PK V  PLE   VS S
Sbjct: 236 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVS-S 294

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           +S C   H   VTS G+++++G G  G LGHG+  S   P+ +   L G R  + + G  
Sbjct: 295 IS-CGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVE-SLKGLRTVRAACGVW 352

Query: 333 HSAAVTE------------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVS 378
           H+AAV E             G ++TWG+GD GRLGHGD + +  PT V  L   +   V+
Sbjct: 353 HTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVA 412

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG   T+ L+  GH V++MGS   G+LG+     +   +V   L K  V ++  G     
Sbjct: 413 CGHCLTVALTTSGH-VYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNFVEEISCGAYHVA 471

Query: 439 ALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
            LT    V+ WG G         +   +TP LV  L   Q+ +V  G +   A+  +  V
Sbjct: 472 VLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAICIHKWV 531

Query: 494 YAWGSNTMGQCGQ 506
                +    C Q
Sbjct: 532 SGVDQSMCSGCRQ 544


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  131 bits (330), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 167/349 (47%), Gaps = 40/349 (11%)

Query: 198 HHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--------KGWLG 249
           H   +D++R KC     +     +R + AG + + +    GGLL +G         G LG
Sbjct: 91  HGDHVDKLRPKCVEALARE---RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLG 147

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
             +   Q +P+ V L  + V +        H L ++ +G V+S+GVG  G LGHG+   Q
Sbjct: 148 HGDQRTQMIPRPV-LSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
             PKLI   L  ++V  ++AG +HS  V E G +Y++G G  G LGHGD      P  + 
Sbjct: 207 LVPKLI-SSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIE 265

Query: 370 ELSDVGAV--SCGESHTLVLS------QDGHTVWSMGSGNLGKLGHEDTGK-VTTPKVIE 420
                 AV  + G SH+LVLS      Q+G  V S G  + G+LG     + + +P  ++
Sbjct: 266 HFVQRPAVKVAAGGSHSLVLSKLYVLEQEGR-VLSFGQNSYGQLGLGHFSRMIASPAQVQ 324

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----------LRSSSISFHTPVLVTGLS 470
              +    ++ AG   S+ LT DG V+ +GL           LR +      P L+  L 
Sbjct: 325 V--EAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNP----EPTLIQSLE 378

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
             +IVDV+ G++  L LS    V+++G    G+ G+ + SN   QP+ V
Sbjct: 379 RERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNAT-QPTVV 426



 Score =  120 bits (301), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 23/281 (8%)

Query: 280 HVLTVTSEGEVYSWGVGE-----HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           H L  T +G + S+G G       G+LGHG+  +Q  P+ ++  L G R+ +V+AG  HS
Sbjct: 120 HSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLS-LSGVRIVKVAAGAHHS 178

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGH 392
             +++ G ++++G G  G LGHGD   +  P L++ L    V  ++ G +H+LV+++ G 
Sbjct: 179 LVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESG- 237

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT------WDGLV 446
            V+S G G+ G LGH DT     PK IE   +    KV AG S S+ L+       +G V
Sbjct: 238 DVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRV 297

Query: 447 FWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
             +G      LGL   S    +P  V   ++   V++  G  H L L+    VY++G   
Sbjct: 298 LSFGQNSYGQLGLGHFSRMIASPAQVQVEAA--AVEIEAGAHHSLVLTNDGRVYSFGLAQ 355

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            GQ G  N      +P+ +  LE   +  + AG+ FS+  +
Sbjct: 356 HGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLS 396



 Score =  120 bits (301), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 95/273 (34%), Positives = 141/273 (51%), Gaps = 26/273 (9%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G V S+G+ +    GHG+ + + RPK +   L  +RV  VSAG  HS   T+DG L ++G
Sbjct: 78  GNVVSFGLADPS--GHGDHVDKLRPKCVEA-LARERVRDVSAGLYHSLVATKDGGLLSFG 134

Query: 348 EGD-----HGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSG 400
            G       GRLGHGD +++  P  V  LS V    V+ G  H+LVLS  G+ V+S G G
Sbjct: 135 YGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGN-VFSFGVG 193

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR------ 454
             G LGH D  +   PK+I +L++ +V  + AG++ S+ +   G V+ +GLG        
Sbjct: 194 IDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG 253

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS------QYNEVYAWGSNTMGQCGQDN 508
            + +S   P  +        V V+ G SH L LS      Q   V ++G N+ GQ G  +
Sbjct: 254 DTDMSL-VPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGH 312

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           FS  +  P++ V +E   V +I AG+  S+  T
Sbjct: 313 FSRMIASPAQ-VQVEAAAV-EIEAGAHHSLVLT 343



 Score =  108 bits (270), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 28/297 (9%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAA 267
           RP L      I  + AG   + +L   G +  +G    G LG  +   Q +PK       
Sbjct: 158 RPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPK------L 211

Query: 268 IVSLSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           I SL   K        AH L V   G+VYS+G+G  G LGHG+T     PK I      +
Sbjct: 212 ISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIE-HFVQR 270

Query: 323 RVTQVSAGHSHSAAVT------EDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVG 375
              +V+AG SHS  ++      ++G + ++G+  +G+LG G       +P  V   +   
Sbjct: 271 PAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAV 330

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGT 434
            +  G  H+LVL+ DG  V+S G    G+LGH  D      P +I++L + R+  V AG 
Sbjct: 331 EIEAGAHHSLVLTNDGR-VYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGN 389

Query: 435 SFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           +FS+ L+ +G VF +G G    L     S  T   V   + H +  +S G SH L +
Sbjct: 390 NFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSAISAGYSHSLVV 446


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 146/286 (51%), Gaps = 18/286 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S++RP+ + G L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKRPEQV-GALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
            + + G +Y WG    G+LG  G  +    P  +  LSDV    V+CG  H+L LS+ G 
Sbjct: 98  TLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   D  K T+P++I++L      ++ AG + S ALT  G VF WG 
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +S G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSS 551
            ++  + ++ P KV  L    V QI  G   + A+   PS   + S
Sbjct: 276 HNSTGHEIN-PRKVFELMGNIVTQIACGRQHTSAFV--PSTGRIYS 318



 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 17/274 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVYG- 244
           VYT GCN   Q+  E     SR R + + +    NI  +  G+  T  L+  G +  +G 
Sbjct: 55  VYTCGCNDLGQLGHEK----SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGF 110

Query: 245 --KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G LGL  T     +P+ +   + +  + V+ C   H L ++   EV+SWG  +HG+L
Sbjct: 111 AADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVA-CGYYHSLALSKGSEVFSWGQNKHGQL 169

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G  L ++    ++  L G    Q++AG +HS A+T  G ++ WG    G+LG  D   
Sbjct: 170 GLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEND 229

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KV 418
           R+ P L+  L    +  +SCGE HT  L+++G  V++ G+G  G+LGH  TG    P KV
Sbjct: 230 RYVPNLLKSLRSQKIVYISCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTGHEINPRKV 288

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            E +     +  C     S  +   G ++ +GLG
Sbjct: 289 FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 97/210 (46%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGDLKS-------RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G +         R    L   + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++ L   G V+ WG      LG
Sbjct: 60  CNDLGQLGHEKSRK--RPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   QI AG   S A T+
Sbjct: 178 QTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207



 Score = 51.2 bits (121), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 19/209 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNT--DIDSTSTPKLTYNI-----GDTD 182
           V +++ AC  Y  L       +   G  K        D+   ++P+L  ++     G   
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 183 ISVAHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
              AHS        V+ WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGL 319
           YS+G+G +G+LG G+T +++ P  + G  
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345


>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
           CCMP2712]
          Length = 312

 Score =  131 bits (329), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 87/239 (36%), Positives = 120/239 (50%), Gaps = 12/239 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C +AH L    +G VYSWG+G  G+LG GN  S  +P  +  GL  +R   V+AG+ HS 
Sbjct: 67  CGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKV-SGLGEERCVSVAAGYYHSF 125

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG---AVSCGESHTLVLSQDGH 392
           AV E G L+ WG G  G+LG G  +S   P  V E  +     AV  GE H+L ++  G 
Sbjct: 126 AVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVG- 184

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           ++WS G  N G+LGH D  +   PK I  L   ++     G +F+VA++    VF WG  
Sbjct: 185 SLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNN 244

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
               LG     +      L +G     ++ VS G  HVL L +   ++AWG N  G  G
Sbjct: 245 RYGQLG-HGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNESGCLG 302



 Score = 82.4 bits (202), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 71/239 (29%), Positives = 113/239 (47%), Gaps = 16/239 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVT 338
           H L +T  G V + G  +  +LG G    +  P+   +  L  KRV +++ G +H+    
Sbjct: 17  HTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMACGDAHNLVRC 76

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGHTVWS 396
            DG +Y+WG G  GRLG G+ KS   P  V+ L +   VS   G  H+  + + G  +++
Sbjct: 77  LDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGG-KLFA 135

Query: 397 MGSGNLGKLGHEDTGKVTT----PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            G+G  G+LG   TGK  +     +V E     R R V  G   S+ +T  G ++ WGL 
Sbjct: 136 WGNGTCGQLG---TGKFESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLWSWGLN 192

Query: 453 L-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                          P  ++ L   +I   S G +  +A+S  ++V++WG+N  GQ G 
Sbjct: 193 NDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGH 251



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 11/198 (5%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTEL--SDV 374
           L G  V QV+AG  H+  +T+ G +   G  D  +LG G    ++   P  V+ L    V
Sbjct: 3   LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRV 62

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             ++CG++H LV   DG +V+S G G+ G+LG  +   V  P  +  L + R   V AG 
Sbjct: 63  VEMACGDAHNLVRCLDG-SVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGY 121

Query: 435 SFSVALTWDGLVFWWGLGL--RSSSISFHT---PVLVTGLSSHQ-IVDVSIGDSHVLALS 488
             S A+   G +F WG G   +  +  F +   PV V    + Q    V  G+ H L ++
Sbjct: 122 YHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMT 181

Query: 489 QYNEVYAWGSNTMGQCGQ 506
               +++WG N  GQ G 
Sbjct: 182 DVGSLWSWGLNNDGQLGH 199



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TPKVIEALRKFRVRKVCAGT 434
           V+ G  HTL L+  G  V + G  +  +LG    G+     P+ +  LR  RV ++  G 
Sbjct: 11  VAAGGDHTLFLTDAGR-VLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMACGD 69

Query: 435 SFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           + ++    DG V+ WGLG        +  S   P  V+GL   + V V+ G  H  A+ +
Sbjct: 70  AHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVME 129

Query: 490 YNEVYAWGSNTMGQCGQDNFSN 511
             +++AWG+ T GQ G   F +
Sbjct: 130 GGKLFAWGNGTCGQLGTGKFES 151


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 161/361 (44%), Gaps = 42/361 (11%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
           ++  +E G   T + + +  + V+G+       T +   PK V L      + V+ C   
Sbjct: 429 DVVELEEGDDATQVEEPSSCMYVWGRPPSLEGGTPLVLRPKHVSLANGQPIVQVA-CGGE 487

Query: 280 HVLTVTSEGEVYSWGVGEHGKLG------HGNTLSQRR------------PKLIM----- 316
           H+L +TS G+VYS+G  E  K+       H +TL                P L+      
Sbjct: 488 HLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLVEELALE 547

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDV 374
             L+   +  V+ G  HS A+T+ G LYTWG G+ GRLGHGD++ R  P  V  L    V
Sbjct: 548 KALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESV 607

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL-RKFRVRKVCAG 433
            + SCG +HT VL+  G +V++ G G  G+LG  D     TP  I    +   +  V  G
Sbjct: 608 VSASCGGAHTAVLTAKG-SVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCG 666

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL---SSHQIVDVSIGDSHV 484
            +F+ AL   G VF WG       GL         P  V  L   +   +VDV+ G +H 
Sbjct: 667 WNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHT 726

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNP----VDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           + L+   E+Y+WG    GQ G  +   P    V  P+  +   D   R  C G+  SIA 
Sbjct: 727 VVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADALCAPDQLARVYC-GAFHSIAT 785

Query: 541 T 541
           T
Sbjct: 786 T 786



 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 30/333 (9%)

Query: 258 LPKRVPLEAAI--VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           L + + LE A+   ++++  C   H L +T  GE+Y+WG GE G+LGHG+   +  P+ +
Sbjct: 540 LVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKV 599

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---S 372
           M  L  + V   S G +H+A +T  G ++T+G G +GRLG GD K R TP  +      +
Sbjct: 600 MS-LLRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGT 658

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK--LGHEDTGKVTTPKVIEALRKF---RV 427
            +  V CG + T  L + G +V++ G    G+  LG+ D  +V  P+ ++ LR      V
Sbjct: 659 SISLVVCGWNFTAALDRQG-SVFTWGKTGEGQCGLGYVDRDQVV-PRCVDKLRDVAGSSV 716

Query: 428 RKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLV-----TGLSSHQIVDVS 478
             V  G + +V LT  G ++ WGLG    L +  +    P  V        +  Q+  V 
Sbjct: 717 VDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADALCAPDQLARVY 776

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G  H +A ++   ++AWG N+ G CG  + +N  D+P ++          +  G  ++I
Sbjct: 777 CGAFHSIATTEQRVMFAWGLNSYGACGLGHTANK-DKPERIDCFSSQTELVVACGHKYTI 835

Query: 539 A-------YTVPPSNSALSSAFTPLCVDVRPHT 564
           A       YT  PS + L +      +++ P T
Sbjct: 836 ALEVNASLYTHSPSQTMLPTGAALNGLEMPPST 868



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 13/168 (7%)

Query: 190 VYTWG------CNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           V+TWG      C L +   D+V  +C         S++  +  G   T +L ++G L  +
Sbjct: 679 VFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSW 738

Query: 244 GKGWLGLANT--TIQPLPKRVPLEA----AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           G G  G   T    QPLP RV L A    A   L+   C   H +  T +  +++WG+  
Sbjct: 739 GLGEYGQLGTGDVYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNS 798

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           +G  G G+T ++ +P+ I      +    V+ GH ++ A+  +  LYT
Sbjct: 799 YGACGLGHTANKDKPERI-DCFSSQTELVVACGHKYTIALEVNASLYT 845


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 169/364 (46%), Gaps = 21/364 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            V+ WG N   Q+ D      S P  +  L S +  I AG F T  L S+GG+  +G+  
Sbjct: 342 GVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNK 401

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   TT +  P  V +   +  ++     + H    TS G V  WG    G+LG G
Sbjct: 402 DGQLGDGTTTTRSTP--VAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDG 459

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T  +  P  + G   G  VT ++AG SH+ A+   G ++ WG    G+LG G    R T
Sbjct: 460 TTTDRSTPVAVSG--LGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT 517

Query: 365 PTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           P  V+ L S+V A++ G  HT  L+  G  +   G+   G+LG   T   +TP  +  L 
Sbjct: 518 PVAVSGLPSEVTAIASGGVHTCALTSSGGVM-CWGANWSGQLGDGTTTARSTPVAVSGLP 576

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
              V  + AG   + ALT  G V+ WG      LG   ++ +  TPV V+GL S  +  +
Sbjct: 577 S-GVMAIAAGDLHTCALTSSGGVWCWGANSSGQLG-DGTTTARSTPVAVSGLPS-GVTAI 633

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           + G  H  AL+    V+ WG+N  GQ G  ++++    P  V GL    V  I AG   +
Sbjct: 634 AAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDS-STPVAVSGLPSG-VTAIAAGRFHT 691

Query: 538 IAYT 541
            A T
Sbjct: 692 CART 695



 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 155/345 (44%), Gaps = 20/345 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            V  WG N   Q+ D      S P  +  L S +  I AG   T  L S+GG++ +G  W
Sbjct: 87  GVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVTAIAAGYAHTCALMSSGGVMCWGDNW 146

Query: 248 ---LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG   TT +  P  V  L + + +++     + H    TS G V  WG    G+LG 
Sbjct: 147 SGQLGDGTTTDRSTPVAVSGLASGVTAIAAG---DDHTCARTSSGGVMCWGDNWSGQLGD 203

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T  +  P  + G   G  VT ++AG SH+ A+   G ++ WG+   G+LG G    R 
Sbjct: 204 GTTTDRSTPVAVSG--LGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRS 261

Query: 364 TPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           TP  V+ L S V A++ G  HT   +  G  +   G+   G+LG   T   +TP  +  L
Sbjct: 262 TPVAVSGLASGVTAIAAGGFHTCARTSSGGVM-CWGANWSGQLGDGTTTARSTPVAVSGL 320

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDV 477
               V  + AG S + ALT  G V+ WG          ++    TPV V+GL S  +  +
Sbjct: 321 AS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGS-GVTAI 378

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           + GD H  AL     V  WG N  GQ G D  +     P  V GL
Sbjct: 379 AAGDFHTCALMSSGGVRCWGRNKDGQLG-DGTTTTRSTPVAVSGL 422



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 122/268 (45%), Gaps = 13/268 (4%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            V+ WG N   Q+ D        P  +  LPS +  I +G   T  L S+GG++ +G  W
Sbjct: 495 GVWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANW 554

Query: 248 ---LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG   TT +  P  V  L + +++++     + H   +TS G V+ WG    G+LG 
Sbjct: 555 SGQLGDGTTTARSTPVAVSGLPSGVMAIAAG---DLHTCALTSSGGVWCWGANSSGQLGD 611

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T ++  P  + G      VT ++AG  H+ A+T  G ++ WG    G+LG G      
Sbjct: 612 GTTTARSTPVAVSG--LPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSS 669

Query: 364 TPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           TP  V+ L S V A++ G  HT   +  G  VW   S   G+LG       +TP  +  L
Sbjct: 670 TPVAVSGLPSGVTAIAAGRFHTCARTGSGG-VWCWASNRYGQLGDGSYTDSSTPVAVSGL 728

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG 450
               V  + AG   + A T  G V  WG
Sbjct: 729 VS-GVTAIAAGVVHTCARTSSGGVMCWG 755



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 125/270 (46%), Gaps = 15/270 (5%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           AH   +TS G V  WG    G+LG G T  +  P  + G   G  VT ++AG++H+ A+ 
Sbjct: 77  AHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSG--VTAIAAGYAHTCALM 134

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSM 397
             G +  WG+   G+LG G    R TP  V+ L S V A++ G+ HT   +  G  +   
Sbjct: 135 SSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGDDHTCARTSSGGVM-CW 193

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G    G+LG   T   +TP  +  L    V  + AG S + AL   G V+ WG      L
Sbjct: 194 GDNWSGQLGDGTTTDRSTPVAVSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGDNWSGQL 252

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G   ++    TPV V+GL+S  +  ++ G  H  A +    V  WG+N  GQ G D  + 
Sbjct: 253 G-DGTTTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTSSGGVMCWGANWSGQLG-DGTTT 309

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
               P  V GL    V  I AG   + A T
Sbjct: 310 ARSTPVAVSGLASG-VTAIAAGDSHTCALT 338



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCG 380
           + VT ++AG +H+ A+T  G +  WG    G+LG G    R TP  V+ L S V A++ G
Sbjct: 67  QGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVTAIAAG 126

Query: 381 ESHTLVL-SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            +HT  L S  G   W  G    G+LG   T   +TP  +  L    V  + AG   + A
Sbjct: 127 YAHTCALMSSGGVMCW--GDNWSGQLGDGTTTDRSTPVAVSGLAS-GVTAIAAGDDHTCA 183

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
            T  G V  WG      LG   ++    TPV V+GL S  +  ++ G SH  AL     V
Sbjct: 184 RTSSGGVMCWGDNWSGQLG-DGTTTDRSTPVAVSGLGS-GVTAIAAGGSHTCALMSSGGV 241

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + WG N  GQ G D  +     P  V GL    V  I AG   + A T
Sbjct: 242 WCWGDNWSGQLG-DGTTTDRSTPVAVSGLASG-VTAIAAGGFHTCART 287



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 16/263 (6%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV----AHSKVYTWGCNLHHQILDEVRGKC 209
           LGD  +++  T +  +  P     I    +      +   V  WG N   Q+ D      
Sbjct: 507 LGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTAR 566

Query: 210 SRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP-L 264
           S P  +  LPS +  I AG   T  L S+GG+  +G    G LG   TT +  P  V  L
Sbjct: 567 STPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGL 626

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
            + + +++       H   +TS G V+ WG    G+LG G+      P  + G      V
Sbjct: 627 PSGVTAIAAG---SFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSG--LPSGV 681

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH 383
           T ++AG  H+ A T  G ++ W    +G+LG G      TP  V+ L S V A++ G  H
Sbjct: 682 TAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSGVTAIAAGVVH 741

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG 406
           T   +  G  +   G+ + G+LG
Sbjct: 742 TCARTSSGGVM-CWGANSSGQLG 763


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 164/319 (51%), Gaps = 19/319 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P++           V  C   H + +  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVG-CGLKHTVFLLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS- 361
           H     +++P+ ++  L  + +  VS G SH+ A+ + G +++WG G  G+LG  + +  
Sbjct: 68  HEK--PRKKPEHVV-ALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEEC 124

Query: 362 RHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKV 418
              P  +  LSDV    V+CG  H+  LS+ G  V+S G    G+LG    G  ++TP++
Sbjct: 125 VRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQ-VFSWGQNQFGQLGLGMHGSSISTPQI 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L+     ++ AG + S A+T  G VF WG      LGL  ++  +  P L+  L S 
Sbjct: 184 IQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWF-PALLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +++ VS G+ H  AL++   V+ +G+   GQ G ++ ++ ++ P KV  L    V QI  
Sbjct: 243 RVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEIN-PRKVFELMGNIVTQISC 301

Query: 533 GSLFSIAYTVPPSNSALSS 551
           G   ++A+T  PS+  + S
Sbjct: 302 GRQHTLAFT--PSSGKMYS 318



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 15/273 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +      I  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDG 114

Query: 247 WLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG--- 302
            LGL N      +P+ +    + V ++   C   H   ++  G+V+SWG  + G+LG   
Sbjct: 115 QLGLNNFEECVRVPRNIKC-LSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGM 173

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG+++S   P++I   L G    Q+SAG +HS A+T  G ++ WG    G+LG  D   R
Sbjct: 174 HGSSIST--PQIIQ-SLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDR 230

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             P L+  L    V  VSCGE HT  L+++G  V++ G+G  G+LGH  T     P+ + 
Sbjct: 231 WFPALLKSLRSQRVIYVSCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTNHEINPRKVF 289

Query: 421 ALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
            L    V ++  G   ++A T   G ++ +GLG
Sbjct: 290 ELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLG 322



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/232 (34%), Positives = 115/232 (49%), Gaps = 25/232 (10%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       +  R+ +      +GK+V  V  G  H+  + +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEF----FHGKKVCDVGCGLKHTVFLLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   K R  P  V  L    + AVS GESHTL L+  G  ++S G G+ G+L
Sbjct: 60  CNDLGQLGHE--KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQ-IFSWGLGSDGQL 116

Query: 406 GHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW--------GLGLRSS 456
           G  +  + V  P+ I+ L   ++ +V  G   S AL+  G VF W        GLG+  S
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGS 176

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           SIS  TP ++  L       +S G +H  A++    V+ WG N  GQ G ++
Sbjct: 177 SIS--TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLND 226



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 97/211 (45%), Gaps = 21/211 (9%)

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--------SDVGAVSCGESHTLVLSQDGHTVWSM 397
           WG   +G+LG G +       +V E           V  V CG  HT+ L  DG TV++ 
Sbjct: 4   WGNASYGQLGLGGIDEE----IVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDG-TVYTC 58

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----- 452
           G  +LG+LGHE   K   P+ + AL    +  V  G S ++AL   G +F WGLG     
Sbjct: 59  GCNDLGQLGHEKPRK--KPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQL 116

Query: 453 -LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
            L +       P  +  LS  QI  V+ G  H  ALS+  +V++WG N  GQ G     +
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGS 176

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +  P  +  L+ +   Q+ AG   S A T+
Sbjct: 177 SISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG 244
            ++++WG     Q+      +C R PR     S+++   +  G   +  L   G +  +G
Sbjct: 103 GQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL          ++      +  +      AH   +T  G V+ WG  + G+L
Sbjct: 163 QNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +T  +  P L+   L  +RV  VS G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLNDTNDRWFPALLKS-LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281

Query: 362 RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL    V  +SCG  HTL  +     ++S G G  G+LG   T    +P  +
Sbjct: 282 EINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
          Length = 1224

 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 153/306 (50%), Gaps = 28/306 (9%)

Query: 244  GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G G LG   +    +P +V     +  + +    E H + + S+G +++WG   +G+LG 
Sbjct: 717  GHGQLGTGTSNSTSVPGKV---INLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGD 773

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
             +T ++  P  +         T VSAG +HS A+  DG ++ +G   +G+LG G   S+ 
Sbjct: 774  DSTTTRYSPVQVS---TLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQR 830

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            TP  V +L+ V A++ G+  +L L  DG TVWS G    G+LG+  T + + P  +  L 
Sbjct: 831  TPVQVKDLTGVVAIAAGKDFSLALKSDG-TVWSWGQNTYGELGNGTTTRSSVPVQVALLT 889

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL--VTGLSSHQIV 475
               V+ + AG    VAL  DG VF WG      LG  SS+IS  TPV   VTG     I 
Sbjct: 890  D--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELG-NSSTISQSTPVQSGVTG-----IK 941

Query: 476  DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             ++ G  H LAL     V++WG N  GQ G  +N S  V  P+ + GL  +    I AG 
Sbjct: 942  GIAAGPYHTLALKSDGTVWSWGYNGYGQLGSGNNTSRSV--PAAIPGLASMA--SIAAGE 997

Query: 535  LFSIAY 540
              SIAY
Sbjct: 998  NQSIAY 1003



 Score =  131 bits (329), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 137/257 (53%), Gaps = 20/257 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + + S+G V+ WG   HG+LG G + S   P  ++  L G ++  ++ G +H+ A+  
Sbjct: 700 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVIN-LTGMKM--IAGGENHTVALRS 756

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG L+TWG   +G+LG     +R++P  V+ L++  AVS GE+H+L L  DG TVW+ G 
Sbjct: 757 DGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDG-TVWAFGY 815

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T    TP  ++ L    V  + AG  FS+AL  DG V+ WG      LG 
Sbjct: 816 NGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGN 873

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF---S 510
            +++ S   PV V  L+   +  ++ GD H +AL +   V+AWG N  G+ G  +    S
Sbjct: 874 GTTTRS-SVPVQVALLT--DVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQS 930

Query: 511 NPVDQPSKVVGLEDVCV 527
            PV   S V G++ +  
Sbjct: 931 TPVQ--SGVTGIKGIAA 945



 Score =  127 bits (319), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 168/344 (48%), Gaps = 29/344 (8%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
            V+ WG N H Q+        S P      + ++ I  G+  T  L S G L  +G    G
Sbjct: 710  VWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYG 769

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG  +TT +  P +V   + + + +     E H L + S+G V+++G   +G+LG G T
Sbjct: 770  QLGDDSTTTRYSPVQV---STLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTT 826

Query: 307  LSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
             SQR P   K + G      V  ++AG   S A+  DG +++WG+  +G LG+G      
Sbjct: 827  SSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSS 880

Query: 364  TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
             P  V  L+DV A++ G+ H + L +DG +V++ G    G+LG+  T   +TP V   + 
Sbjct: 881  VPVQVALLTDVKAIAAGDYHGVALKKDG-SVFAWGYNGNGELGNSSTISQSTP-VQSGVT 938

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
               ++ + AG   ++AL  DG V+ WG      LG   ++ S   P  + GL+S  +  +
Sbjct: 939  G--IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG-SGNNTSRSVPAAIPGLAS--MASI 993

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            + G++  +A      +Y+WG N  GQ G     +  + P KV+G
Sbjct: 994  AAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD-TNVPHKVIG 1036


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 136/277 (49%), Gaps = 15/277 (5%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           VY  GW     LG  N++    P+ V     I    ++ C ++H L VT  GEV SWG  
Sbjct: 98  VYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA-CGDSHCLAVTMAGEVQSWGRN 156

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           ++G+LG G T     P+ I     G  V  ++AG  H+AAVTEDG LY WG G +G LG 
Sbjct: 157 QNGQLGLGTTEDSLLPQKIQS-FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL 215

Query: 357 GDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           GD   R  P  V+  E   +  ++CG  HT+ +S  G ++++ G    G+LGH D     
Sbjct: 216 GDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSG-SLYTYGWSKYGQLGHGDFEDHL 274

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGL 469
            P  +EAL+   + ++  G   ++ALT DG ++ WG           T     PV V   
Sbjct: 275 VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFP 334

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              ++  V+ G  H LA ++   V++WG  T GQ G 
Sbjct: 335 EDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGH 371



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 13/260 (5%)

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEG 349
           SWG GE G+LGHG+   +  P ++ G       +T V  G  H+ A +ED   +Y+WG G
Sbjct: 45  SWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWG 104

Query: 350 DHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           D GRLGHG+     TP  V  L    +  ++CG+SH L ++  G  V S G    G+LG 
Sbjct: 105 DFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGE-VQSWGRNQNGQLGL 163

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH------ 461
             T     P+ I++     V+ + AG   + A+T DG ++ WG G R  ++         
Sbjct: 164 GTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWG-RYGNLGLGDRNDRL 222

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            P  V+ +   ++V ++ G  H + +S    +Y +G +  GQ G  +F + +  P K+  
Sbjct: 223 VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKLEA 281

Query: 522 LEDVCVRQICAGSLFSIAYT 541
           L+D  + QI  G   ++A T
Sbjct: 282 LKDSSISQISGGWRHTMALT 301



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 123/241 (51%), Gaps = 14/241 (5%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS----DVGAVSC 379
           V  VSAG SHS A+    +L +WG G+ G+LGHGD + R  PT+++        + +V C
Sbjct: 24  VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVIC 83

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT   S+D   V+S G G+ G+LGH ++  V TP+ ++AL+  +++++  G S  +A
Sbjct: 84  GADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLA 143

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T  G V  WG      LGL ++  S   P  +       +  ++ G  H  A+++  ++
Sbjct: 144 VTMAGEVQSWGRNQNGQLGLGTTEDSL-LPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL 202

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF 553
           Y WG    G  G  + ++ +  P KV  +E   +  I  G   +I  TV  S S  +  +
Sbjct: 203 YGWGWGRYGNLGLGDRNDRL-VPEKVSSVEGEKMVLIACGWRHTI--TVSSSGSLYTYGW 259

Query: 554 T 554
           +
Sbjct: 260 S 260



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 16/245 (6%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++QS     ++ I AG   T  +   G L  YG 
Sbjct: 148 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDL--YGW 205

Query: 246 GW-----LGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           GW     LGL +   + +P++V  +E   + L    C   H +TV+S G +Y++G  ++G
Sbjct: 206 GWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIA--CGWRHTITVSSSGSLYTYGWSKYG 263

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHG+      P  +   L    ++Q+S G  H+ A+T DG LY WG    G++G GD 
Sbjct: 264 QLGHGDFEDHLVPHKLEA-LKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDT 322

Query: 360 KSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
                P  V   E   V  V+CG  HTL  ++    V+S G G  G+LGH +      P 
Sbjct: 323 DDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEK-KNVFSWGRGTSGQLGHGEIVDRNKPV 381

Query: 418 VIEAL 422
           +I+AL
Sbjct: 382 MIDAL 386



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 9/157 (5%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
           I  G   T  + S+G L  YG    G LG  +     +P ++    A+   S+S+ S   
Sbjct: 238 IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKL---EALKDSSISQISGGW 294

Query: 280 -HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + +TS+G++Y WG  + G++G G+T     P  +      ++V QV+ G  H+ A T
Sbjct: 295 RHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKF-PEDQKVAQVACGWRHTLAFT 353

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
           E   +++WG G  G+LGHG++  R+ P ++  LS  G
Sbjct: 354 EKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDG 390


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  131 bits (329), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 147/315 (46%), Gaps = 25/315 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 372 CGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFH 431

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +  VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +  
Sbjct: 432 TVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVM 491

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +    +V  G   +VAL
Sbjct: 492 AGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVAL 551

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G L  + + ++S G  HV  L+   EVY 
Sbjct: 552 TTSGHVYTMGSAVYGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 611

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    G+ G  N ++  + P+ V  L+D  VR +  G+ F+ A  +   +  +S     
Sbjct: 612 WGKGANGRLGHGN-TDDKNTPTLVEALKDKQVRNVVCGTNFTAAICI---HKWISGVDQS 667

Query: 556 LCVDVRPHTFTLIRE 570
           +C   R   F L R+
Sbjct: 668 MCSGCR-QPFNLRRK 681



 Score =  114 bits (286), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 136/301 (45%), Gaps = 30/301 (9%)

Query: 258 LPKRVPLEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           +PK  PLE A+ + +    C   H   V+ +GE+YSWG    G+LGHG       PKLI 
Sbjct: 303 VPK--PLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLI- 359

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLV---TEL 371
             L    +  V+ G  H+ AVT  G LYTWG+G    G LGHG+  S   P  +    E 
Sbjct: 360 DALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
             V ++SCG  HT++++  G  +++ G G+ G LGH D   ++ PK +E+L+  R  +  
Sbjct: 420 IHVSSISCGPFHTVIVTSAGQ-LFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAA 478

Query: 432 AGTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQI 474
            G   + A+               G +F WG G +         S   P  V  L     
Sbjct: 479 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNF 538

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAG 533
             V+ G    +AL+    VY  GS   GQ G       +  P++V G L    V +I  G
Sbjct: 539 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGML--PARVEGKLHKNFVEEISCG 596

Query: 534 S 534
           +
Sbjct: 597 A 597



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 24/240 (10%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGL---ANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  I  G F T ++ S G L  +G G  G+    +     +PK V     + ++  + C
Sbjct: 421 HVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAA-C 479

Query: 277 SEAHVLTVTS------------EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
              H   V               G++++WG G+ G+LGHG+  S+  P  +   L     
Sbjct: 480 GVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVA-ALVEPNF 538

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH----GDLKSRHTPTLVTELSDVGAVSCG 380
            QV+ GH  + A+T  G +YT G   +G+LG+    G L +R    L      V  +SCG
Sbjct: 539 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLPARVEGKLHKNF--VEEISCG 596

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             H  VL+     V++ G G  G+LGH +T    TP ++EAL+  +VR V  GT+F+ A+
Sbjct: 597 AYHVAVLTSRTE-VYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAI 655


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  131 bits (329), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 25/329 (7%)

Query: 240 LLVYGKGWLGLANT--TIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGV 295
           +L +G    G   T  T+QP+         I   SV +  C   H + +  +GEVY+ GV
Sbjct: 60  MLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGV 119

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              G+LGH    S  +P+ I G L  + +  V+ G SHS A+++ G L++WG G  G+LG
Sbjct: 120 NTKGQLGHEKEGS--KPEQI-GALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLG 176

Query: 356 HGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH-TVWSMGS-GNLGKLGHEDT 410
               + S   P L+ +L+   +  VSCG  H L L+ DG    W   S G LG LG E  
Sbjct: 177 LTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLG-LGKEFP 235

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
            +  +P+ +++L    + +V AG + S AL+  G VF WG      LGL S      +P 
Sbjct: 236 SQ-ASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGL-SDEQDRESPC 293

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
            V  L + ++V +S G  H   L++   V+ +G+ + GQ G D+F++ V+ P +V+ L  
Sbjct: 294 HVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVN-PRRVLELMG 352

Query: 525 VCVRQICAGSLFSIAYTVPPSNSALSSAF 553
             V QI  G   ++A+ VP  +S L  AF
Sbjct: 353 SEVSQIACGRQHTLAF-VP--SSGLIYAF 378



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 11/255 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E+H L ++ +G ++SWG G  G+LG   T        ++  L  + + QVS G+ H  
Sbjct: 150 CGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCL 209

Query: 336 AVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           A+  DG  + WG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G 
Sbjct: 210 ALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSG- 268

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V+  G    G+LG  D     +P  ++ LR  +V  +  G+  +  LT  G VF +G G
Sbjct: 269 AVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAG 328

Query: 453 L--RSSSISFH---TPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQ 506
              +    SF+    P  V  L   ++  ++ G  H LA       +YA+G    GQ G 
Sbjct: 329 SCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGS 388

Query: 507 DNFSNPVDQPSKVVG 521
            +  N +  PS V G
Sbjct: 389 GHTCN-LKCPSPVKG 402



 Score = 47.4 bits (111), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G   T +L  TGG+  +G   
Sbjct: 270 VFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGS 329

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     +S   C   H L  V S G +Y++G G  G+LG 
Sbjct: 330 CGQLGHDSFNDEVNPRRV-LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGS 388

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 389 GHTCNLKCPSPVKG 402


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 153/306 (50%), Gaps = 28/306 (9%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G G LG   +    +P +V     +  + +    E H + + S+G +++WG   +G+LG 
Sbjct: 657 GHGQLGTGTSNSTSVPGKV---INLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGD 713

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            +T ++  P  +         T VSAG +HS A+  DG ++ +G   +G+LG G   S+ 
Sbjct: 714 DSTTTRYSPVQVS---TLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQR 770

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           TP  V +L+ V A++ G+  +L L  DG TVWS G    G+LG+  T + + P  +  L 
Sbjct: 771 TPVQVKDLTGVVAIAAGKDFSLALKSDG-TVWSWGQNTYGELGNGTTTRSSVPVQVALLT 829

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL--VTGLSSHQIV 475
              V+ + AG    VAL  DG VF WG      LG  SS+IS  TPV   VTG     I 
Sbjct: 830 D--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELG-NSSTISQSTPVQSGVTG-----IK 881

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            ++ G  H LAL     V++WG N  GQ G  +N S  V  P+ + GL  +    I AG 
Sbjct: 882 GIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSV--PAAIPGLASIA--SIAAGE 937

Query: 535 LFSIAY 540
             SIAY
Sbjct: 938 NQSIAY 943



 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 137/257 (53%), Gaps = 20/257 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + + S+G V+ WG   HG+LG G + S   P  ++  L G ++  ++ G +H+ A+  
Sbjct: 640 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVIN-LTGMKM--IAGGENHTVALRS 696

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG L+TWG   +G+LG     +R++P  V+ L++  AVS GE+H+L L  DG TVW+ G 
Sbjct: 697 DGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDG-TVWAFGY 755

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T    TP  ++ L    V  + AG  FS+AL  DG V+ WG      LG 
Sbjct: 756 NGYGQLGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGN 813

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF---S 510
            +++ S   PV V  L+   +  ++ GD H +AL +   V+AWG N  G+ G  +    S
Sbjct: 814 GTTTRS-SVPVQVALLT--DVKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQS 870

Query: 511 NPVDQPSKVVGLEDVCV 527
            PV   S V G++ +  
Sbjct: 871 TPVQ--SGVTGIKGIAA 885



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 29/344 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N H Q+        S P      + ++ I  G+  T  L S G L  +G    G
Sbjct: 650 VWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYG 709

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +TT +  P +V   + + + +     E H L + S+G V+++G   +G+LG G T
Sbjct: 710 QLGDDSTTTRYSPVQV---STLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTT 766

Query: 307 LSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            SQR P   K + G      V  ++AG   S A+  DG +++WG+  +G LG+G      
Sbjct: 767 SSQRTPVQVKDLTG------VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSS 820

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P  V  L+DV A++ G+ H + L +DG +V++ G    G+LG+  T   +TP V   + 
Sbjct: 821 VPVQVALLTDVKAIAAGDYHGVALKKDG-SVFAWGYNGNGELGNSSTISQSTP-VQSGVT 878

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
              ++ + AG   ++AL  DG V+ WG      LG   ++ S   P  + GL+S  I  +
Sbjct: 879 G--IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLG-NGNNTSRSVPAAIPGLAS--IASI 933

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           + G++  +A      +Y+WG N  GQ G     +  + P KV+G
Sbjct: 934 AAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD-TNVPHKVIG 976


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 151/281 (53%), Gaps = 17/281 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH    S  +P+ I G L G+ +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS--KPEQI-GALAGQHIVHVACGESHSV 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG   ++   T P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ +++L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGK 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L S ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NSSGQLGL-SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAF-VPSSG 314



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 15/284 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +VYT G N   Q+  +  G  S+P ++ +L   +I H+  G+  +  L   G L  +G G
Sbjct: 54  EVYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAG 111

Query: 247 WLG-LANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G L  TTI+    +P+ +        L VS C   H L + ++G+ ++WG   +G+LG
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQVS-CGNWHCLALAADGQFFTWGQNSYGQLG 170

Query: 303 HGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G    SQ  P+ +   L G  + QV+AG +HS A++  G ++ WG+   G+LG  D + 
Sbjct: 171 LGKECPSQASPQRVK-SLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R +P  V  L    V  +SCGE HT VL++ G  V++ G+G+ G+LGH+       P+ +
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 420 EALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRSSSISFHT 462
             L    V ++  G   ++A     G+++ +G G R    + HT
Sbjct: 289 LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 13/223 (5%)

Query: 293 WGVGEHGKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           WG   +G+ G G+ L    P+  + G ++ + V +V+ G +HS  + EDG +YT G    
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH---E 408
           G+LGH    S+           +  V+CGESH++ LS  G  ++S G+G+ G+LG    E
Sbjct: 64  GQLGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQ-LFSWGAGSDGQLGLTTIE 122

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
           D   VT P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S  +
Sbjct: 123 DA--VTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           P  V  L    +  V+ G +H  ALS    V+ WG N+ GQ G
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 17/247 (6%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
             ++++WG     Q+ L  +    + PRL  +     I  +  G +    L + G    +
Sbjct: 102 QGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTW 161

Query: 244 GK---GWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G+   G LGL      Q  P+RV     I  L+      AH   ++  G V+ WG    G
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220

Query: 300 KLGHGNTLSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +LG  +   +  P   KL    L  ++V  +S G  H+A +T+ G ++T+G G  G+LGH
Sbjct: 221 QLGLSDERDRESPCHVKL----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 357 GDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             +     P  V EL  S+V  ++CG  HTL        +++ G G  G+LG   T  V 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVK 336

Query: 415 TPKVIEA 421
            P  ++ 
Sbjct: 337 CPSPVKG 343



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 9/176 (5%)

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
           +V  V+CG +H++ L +DG  V++ G    G+LGH+  G  + P+ I AL    +  V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVAC 91

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G S SVAL+  G +F WG      LGL +   +   P L+  L+   I+ VS G+ H LA
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           L+   + + WG N+ GQ G          P +V  L+ + + Q+ AG   S A ++
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL 207


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 162/338 (47%), Gaps = 23/338 (6%)

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNT 306
           G   +  QP   R+    +I ++    C E H   +T+ G++Y+WG G H  G LGHG+ 
Sbjct: 321 GAGTSIFQP---RLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSN 377

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +S   PK + G L G +V+ VS G  H+A +T  G LYT+G+G  G LGHG+ ++   P 
Sbjct: 378 VSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPK 437

Query: 367 LVTELSDVG--AVSCGESHT-----LVLSQDGHT---VWSMGSGNLGKLGHEDTGKVTTP 416
            V  L  +   +VSCG  HT     ++++Q   +   +++ G G+  +LGH D      P
Sbjct: 438 EVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKP 497

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLV-TGLSS 471
             + +L  +   K   G + ++ LT  G +F  G      L + +     P LV   L  
Sbjct: 498 TCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGG 557

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +V+V  G  HV  L+Q  EVY WG    G+ G  + ++    P+ V  L D  V++I 
Sbjct: 558 GGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIAD-RKTPTFVEALRDRSVKRIA 616

Query: 532 AGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIR 569
            GS F+ A     S S +  +    C   +P  FT  R
Sbjct: 617 CGSGFTAAICQHKSVSGMEQSQCSSC--RQPFGFTRKR 652



 Score =  127 bits (320), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 160/347 (46%), Gaps = 33/347 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
            ++V+TWG     ++         +PRL +SL   N+  I  G+F T  + +TG L  +G
Sbjct: 304 QAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWG 363

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PLE   + +S   C   H   +TS G++Y++G G 
Sbjct: 364 DGTHNAGLLGHGSNVSHWIPKRVSGPLEG--LQVSAVSCGTWHTALITSSGKLYTFGDGT 421

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------DGLLYTWGE 348
            G LGHGN  +   PK +   L G R   VS G  H+AAV E          G L+TWG+
Sbjct: 422 FGVLGHGNRETISYPKEVE-SLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGD 480

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           GD  RLGHGD  S+  PT V  L D       CG + T+ L+  GH +++ GS   G+LG
Sbjct: 481 GDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGH-IFTAGSSVYGQLG 539

Query: 407 H-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA-LTWDGLVFWWGLG----LRSSSIS- 459
           +  + G+   P+++E              ++ VA LT  G V+ WG G    L    I+ 
Sbjct: 540 NPNNDGRY--PRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIAD 597

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             TP  V  L    +  ++ G     A+ Q+  V     +    C Q
Sbjct: 598 RKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSCRQ 644



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 106/239 (44%), Gaps = 23/239 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V+ V+ G  H+A VT    ++TWGE   GRLGHG   S   P LV  LS  +V  ++CGE
Sbjct: 288 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGE 347

Query: 382 SHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVA 439
            HT  ++  G    W  G+ N G LGH        PK +   L   +V  V  GT  +  
Sbjct: 348 FHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTAL 407

Query: 440 LTWDGLVFWWGLGL-------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-----L 487
           +T  G ++ +G G           +IS+  P  V  L   + + VS G  H  A     +
Sbjct: 408 ITSSGKLYTFGDGTFGVLGHGNRETISY--PKEVESLKGLRTISVSCGVWHTAAVVEVIM 465

Query: 488 SQYN----EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           +Q N    +++ WG     + G  + S+ + +P+ V  L D    +   G   +I  T 
Sbjct: 466 AQSNTSSGKLFTWGDGDKYRLGHGDRSSKL-KPTCVPSLIDYNFHKAVCGHTLTIGLTT 523


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 152/331 (45%), Gaps = 29/331 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E H   VT  G++Y+WG G+ G LGHGN +S   PK +   + G  V+ ++ G  H+A
Sbjct: 405 CGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 464

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ---- 389
            VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +    
Sbjct: 465 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 524

Query: 390 -------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                      +++ G G+  +LGH D      P  + AL +    +V  G S +VALT 
Sbjct: 525 SSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 584

Query: 443 DGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G  +     + H     P  V G L    + +++ G  HV  L+   EVY WG
Sbjct: 585 SGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 644

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             + G+ G  + ++  + P+ V  L+D  V+ I  GS F+ A  +    S +  +    C
Sbjct: 645 KGSNGRLGHGD-ADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGC 703

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFC 588
              +P  F   R        C+  G  + FC
Sbjct: 704 --RQPFNFKRKRH------NCYNCG--LVFC 724



 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 139/300 (46%), Gaps = 30/300 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+ IV L V    C   H + VT +GE +SWG    G+LGHG   + + PKLI
Sbjct: 336 LPK--ALESTIV-LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI 392

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-- 373
              L    +  V+ G  HS AVT  G LYTWG+GD G LGHG+  S   P  V  L +  
Sbjct: 393 -DALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGI 451

Query: 374 -VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            V +++CG  HT V++  G  +++ G G  G LGH D   V  P+ +++L+  R  +   
Sbjct: 452 HVSSIACGPYHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAAC 510

Query: 433 GTSFSVALT------------WDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIV 475
           G   + A+               G +F WG G +S            P  V  L      
Sbjct: 511 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFC 570

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGS 534
            V+ G S  +AL+    VY  GS   GQ G  +    V  P++V G L    V +I  G+
Sbjct: 571 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV--PTRVDGKLHKSFVEEIACGA 628



 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 34/334 (10%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           ++WG     ++   V      P+L      +NI  +  G++ +  +  +G L  +GKG  
Sbjct: 368 FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDF 427

Query: 249 GL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+    N     +PKRV      + +S   C   H   VTS G+++++G G  G LGHG+
Sbjct: 428 GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 487

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGEGDHGR 353
             S   P+ +   L G R  + + G  H+AAV E             G L+TWG+GD  R
Sbjct: 488 RKSVFIPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 546

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HED 409
           LGHGD + +  PT V  L   +   V+CG S T+ L+  GH V++MGS   G+LG  H D
Sbjct: 547 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYGQLGNPHAD 605

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPV 464
            GKV T +V   L K  V ++  G      LT    V+ WG G         +   ++P 
Sbjct: 606 -GKVPT-RVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPT 663

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           LV  L   Q+  ++ G +   A+     ++ W S
Sbjct: 664 LVESLKDKQVKSIACGSNFTAAVC----LHKWAS 693


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 140/264 (53%), Gaps = 15/264 (5%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRR--PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +Y WG   HG+LG G    ++   P+  M       V +V  G SH+  +T++G +Y  G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRK-MDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 348 EGDHGRLGHG-DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
             DHG+LGH  D      P  +T L +  +  +SCG +H+L L+  G  V+S GS  +G+
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQ-VFSWGSNAVGQ 120

Query: 405 LGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           LGH+ + G+  TP++I+A+    V ++ +G    +ALT +G ++ WG      LG+ ++S
Sbjct: 121 LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTS 180

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
                P L+  L+   I  ++ G +H  A+S+   ++ WG NT GQ G ++  N    P+
Sbjct: 181 EKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL-NSRCYPT 239

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
           ++  L  + VR I  G  FS+  T
Sbjct: 240 QLRTLRSLGVRYISCGDDFSVFLT 263



 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 18/308 (5%)

Query: 246 GWLGLANTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL     + +  P+++    A   + V +C  +H L +T EG++Y+ G  +HG+LGH
Sbjct: 12  GELGLGGIEEEQVMVPRKMDWSQADEVVRV-ECGTSHTLFLTKEGKMYACGNNDHGQLGH 70

Query: 304 G-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
             +TL  +RP+ +   L    +T +S G +HS A+T  G +++WG    G+LGH     R
Sbjct: 71  DLDTLPNKRPQRLT-SLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGR 129

Query: 363 H-TPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKV 418
             TP ++  +    V  ++ G+ H L L+ +G  +++ GS + G+LG   T  KV  P +
Sbjct: 130 QPTPRMIKAIGAKHVVQIASGQYHCLALTNNGE-LYAWGSNSYGQLGIGTTSEKVPMPTL 188

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L    +  +  G + S A++  G +F WG      LGL   + S   P  +  L S 
Sbjct: 189 IQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN-SRCYPTQLRTLRSL 247

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
            +  +S GD   + L+    V+  G+ T GQ G  + SN +  P KV  L    + QI  
Sbjct: 248 GVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEI-VPRKVFELMGSKITQIAC 306

Query: 533 GSLFSIAY 540
           G   ++A+
Sbjct: 307 GRRHTLAF 314



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 16/278 (5%)

Query: 187 HSKVYTWGCNLHHQI---LDEVRGKCSRP-RLQSLPSNI-RHIEAGQFCTFLLDSTGGLL 241
             K+Y  G N H Q+   LD +  K  RP RL SL + I   I  G   +  L + G + 
Sbjct: 54  EGKMYACGNNDHGQLGHDLDTLPNK--RPQRLTSLENYIITCISCGTAHSLALTNWGQVF 111

Query: 242 VYGKGWLGL----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            +G   +G     A    QP P+ +    A   + ++   + H L +T+ GE+Y+WG   
Sbjct: 112 SWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIAS-GQYHCLALTNNGELYAWGSNS 170

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +G+LG G T  +     ++  L G  +  ++ G +HS AV++ G ++ WG+   G+LG  
Sbjct: 171 YGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLN 230

Query: 358 DLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
           DL SR  PT +  L  +G   +SCG+  ++ L+ +G  V++ G+G  G+LGH        
Sbjct: 231 DLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEG-GVFTCGAGTFGQLGHGSCSNEIV 289

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
           P+ +  L   ++ ++  G   ++A     G ++ +GLG
Sbjct: 290 PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 327


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 160/340 (47%), Gaps = 36/340 (10%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP---RLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           +  K++ WG N   Q+ D      + P   ++ +L + I  ++ G   +  LDS G +  
Sbjct: 172 SEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINAL-TTITAVDCGGDHSMALDSLGRVWA 230

Query: 243 YG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G    G LG   T              +  +        + + ++S+G V +WG    G
Sbjct: 231 WGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAGGEYSIALSSDGSVLTWGANSDG 290

Query: 300 KLGHGNTLSQRRPKLI-----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           +LG+GNT     P  I     M G        +SAG +HS AVTEDG +Y WG  D G++
Sbjct: 291 QLGNGNTDQNSVPTKISSLPLMKG--------ISAGEAHSLAVTEDGFVYAWGLNDEGQI 342

Query: 355 GHGDLKSRHTPTL----VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           G+G+ KS   P L    V  L+D+ AV  G + +L L  DG  VW+ G  + G+LG    
Sbjct: 343 GNGE-KSADNPVLNPVQVQGLTDIDAVCAGATFSLALGIDGR-VWAWGLNDEGQLGDGTN 400

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVL 465
              TTP  +E     ++  V  G+  S+A+  +G V  WGL         S+ S   P+ 
Sbjct: 401 TNSTTP--VEVTNLAKISAVACGSDHSLAIR-NGKVKSWGLNDEGQLGDGSTRSSSAPLD 457

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           VTGLS   IV V+ G+SH LA++    +Y WG N  GQ G
Sbjct: 458 VTGLS--DIVYVAAGESHSLAITSKGNIYVWGLNGDGQLG 495



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 169/348 (48%), Gaps = 22/348 (6%)

Query: 206 RGKCSRPRLQSLPSNIR-HIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKR 261
           R   ++P+    P  +   I  G   +  LDS G L  +G    G LG      Q  P  
Sbjct: 141 RPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVA 200

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           V + A + +++   C   H + + S G V++WG    G+LG G T +     + +     
Sbjct: 201 VQINA-LTTITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNL 259

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE 381
             +  +SAG  +S A++ DG + TWG    G+LG+G+      PT ++ L  +  +S GE
Sbjct: 260 TDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPLMKGISAGE 319

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDT---GKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           +H+L +++DG  V++ G  + G++G+ +      V  P  ++ L    +  VCAG +FS+
Sbjct: 320 AHSLAVTEDGF-VYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTD--IDAVCAGATFSL 376

Query: 439 ALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           AL  DG V+ WGL         ++ +  TPV VT L+  +I  V+ G  H LA+ +  +V
Sbjct: 377 ALGIDGRVWAWGLNDEGQLGDGTNTNSTTPVEVTNLA--KISAVACGSDHSLAI-RNGKV 433

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +WG N  GQ G D  +     P  V GL D+    + AG   S+A T
Sbjct: 434 KSWGLNDEGQLG-DGSTRSSSAPLDVTGLSDIVY--VAAGESHSLAIT 478



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 14/241 (5%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +   V TWG N   Q+ +    + S P ++ SLP  ++ I AG+  +  +   G +  +G
Sbjct: 277 SDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLPL-MKGISAGEAHSLAVTEDGFVYAWG 335

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV-LTVTSEGEVYSWGVGEHGK 300
              +G +G    +    P   P++   ++   + C+ A   L +  +G V++WG+ + G+
Sbjct: 336 LNDEGQIGNGEKSAD-NPVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGLNDEGQ 394

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G   +   P  +       +++ V+ G  HS A+  +G + +WG  D G+LG G  +
Sbjct: 395 LGDGTNTNSTTPVEVT---NLAKISAVACGSDHSLAI-RNGKVKSWGLNDEGQLGDGSTR 450

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVI 419
           S   P  VT LSD+  V+ GESH+L ++  G+  VW + +G+ G+LG        TPK I
Sbjct: 451 SSSAPLDVTGLSDIVYVAAGESHSLAITSKGNIYVWGL-NGD-GQLGDGTNRSSRTPKTI 508

Query: 420 E 420
           +
Sbjct: 509 D 509


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 149/310 (48%), Gaps = 20/310 (6%)

Query: 248 LGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           LG        LP+  R P  ++  ++S   C  AHV+ +T+ G V +WG G  G+LG G+
Sbjct: 241 LGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGD 300

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +S   PK +M  L    +T VSAG SHS  V+++G LYT G+G  G+LGHGD + R  P
Sbjct: 301 MISSLHPKPVMR-LGSYFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFP 359

Query: 366 TLVTELSD--VGAVSCGESHTLVL--SQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIE 420
             V   SD  V  ++CG  H+L L     G  V+  G+G  G+LG  +    V  P +  
Sbjct: 360 EEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSS 419

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
            L    +  + AG   S AL+ +G ++ WG G +S+S   ++P  +   SS     V++G
Sbjct: 420 NLEAAEIVGIAAGGDHSAALSAEGHLYTWGRGFKSTS-DVYSPQHLPSPSS--FSKVALG 476

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV---------DQPSKVVGLEDVCVRQIC 531
            +H L L+   E+Y  G    G        N +         D    V  L  + V  I 
Sbjct: 477 WNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIA 536

Query: 532 AGSLFSIAYT 541
           AG+  S+  T
Sbjct: 537 AGAEHSVIVT 546



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 14/224 (6%)

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY--GKRVTQVSAGHSHSAAVTEDGLLY 344
           E E++SWG G   +LG G       P+L+          ++ +S G +H  A+T  G + 
Sbjct: 227 EQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVL 286

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG G+ G+LG GD+ S   P  V  L    +  VS G SH+  +S +G  +++ G G+ 
Sbjct: 287 TWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEG-KLYTCGDGSF 345

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG---LVFWWGLGLR----- 454
           G+LGH D      P+ +       V K+  G   S+AL        V+ +G G R     
Sbjct: 346 GQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGI 405

Query: 455 SSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           S  I + + P+L + L + +IV ++ G  H  ALS    +Y WG
Sbjct: 406 SKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWG 449



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 93/221 (42%), Gaps = 30/221 (13%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE-----AGQFCTFLLDSTGGLLVY 243
           +VY +G     Q+   +  K     L  L SN+   E     AG   +  L + G L  +
Sbjct: 391 QVYGFGAGKRGQL--GISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTW 448

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G+G     +T+    P+ +P  +   S S       H L +T EGE+Y  G   HG L  
Sbjct: 449 GRG---FKSTSDVYSPQHLPSPS---SFSKVALGWNHALVLTDEGELYMLGGKHHGALSD 502

Query: 304 GNTL---------SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
              L         S+      +  L G +V  ++AG  HS  VTEDG + TWG G+HG+L
Sbjct: 503 SEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQL 562

Query: 355 GHGDLKSRHTPTLV-------TELSDVGAVSCGESHTLVLS 388
           G GD      P  V       +   DV  V CG   T+ ++
Sbjct: 563 GLGDTCDHTNPQTVNLNLKLESTAYDV-KVYCGSGFTVAVA 602


>gi|449478696|ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 149/310 (48%), Gaps = 20/310 (6%)

Query: 248 LGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           LG        LP+  R P  ++  ++S   C  AHV+ +T+ G V +WG G  G+LG G+
Sbjct: 241 LGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGD 300

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +S   PK +M  L    +T VSAG SHS  V+++G LYT G+G  G+LGHGD + R  P
Sbjct: 301 MISSLHPKPVMR-LGSYFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRCFP 359

Query: 366 TLVTELSD--VGAVSCGESHTLVL--SQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIE 420
             V   SD  V  ++CG  H+L L     G  V+  G+G  G+LG  +    V  P +  
Sbjct: 360 EEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSS 419

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
            L    +  + AG   S AL+ +G ++ WG G +S+S   ++P  +   SS     V++G
Sbjct: 420 NLEAAEIVGIAAGGDHSAALSAEGHLYTWGRGFKSTS-DVYSPQHLPSPSS--FSKVALG 476

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV---------DQPSKVVGLEDVCVRQIC 531
            +H L L+   E+Y  G    G        N +         D    V  L  + V  I 
Sbjct: 477 WNHALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIA 536

Query: 532 AGSLFSIAYT 541
           AG+  S+  T
Sbjct: 537 AGAEHSVIVT 546



 Score = 90.5 bits (223), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 14/224 (6%)

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY--GKRVTQVSAGHSHSAAVTEDGLLY 344
           E E++SWG G   +LG G       P+L+          ++ +S G +H  A+T  G + 
Sbjct: 227 EQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAHVIALTAGGGVL 286

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG G+ G+LG GD+ S   P  V  L    +  VS G SH+  +S +G  +++ G G+ 
Sbjct: 287 TWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEG-KLYTCGDGSF 345

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG---LVFWWGLGLR----- 454
           G+LGH D      P+ +       V K+  G   S+AL        V+ +G G R     
Sbjct: 346 GQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGI 405

Query: 455 SSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           S  I + + P+L + L + +IV ++ G  H  ALS    +Y WG
Sbjct: 406 SKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTWG 449



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 22/180 (12%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE-----AGQFCTFLLDSTGGLLVY 243
           +VY +G     Q+   +  K     L  L SN+   E     AG   +  L + G L  +
Sbjct: 391 QVYGFGAGKRGQL--GISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEGHLYTW 448

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G+G     +T+    P+ +P  +   S S       H L +T EGE+Y  G   HG L  
Sbjct: 449 GRG---FKSTSDVYSPQHLPSPS---SFSKVALGWNHALVLTDEGELYMLGGKHHGALSD 502

Query: 304 GNTL---------SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
              L         S+      +  L G +V  ++AG  HS  VTEDG + TWG G+HG+L
Sbjct: 503 SEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQL 562


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 151/281 (53%), Gaps = 17/281 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH    S  +P+ I G L G+ +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS--KPEQI-GALAGQHIVHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG   ++   T P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ +++L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGK 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L S ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NSSGQLGL-SDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVSQIACGRHHTLAF-VPSSG 314



 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 15/284 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +VYT G N   Q+  +  G  S+P ++ +L   +I H+  G+  +  L   G L  +G G
Sbjct: 54  EVYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAG 111

Query: 247 WLG-LANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G L  TTI+    +P+ +        L VS C   H L + ++G+ ++WG   +G+LG
Sbjct: 112 SDGQLGLTTIEDAVTVPRLIKKLNQQTILQVS-CGNWHCLALAADGQFFTWGQNSYGQLG 170

Query: 303 HGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G    SQ  P+ +   L G  + QV+AG +HS A++  G ++ WG+   G+LG  D + 
Sbjct: 171 LGKECPSQASPQRVK-SLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD 229

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R +P  V  L    V  +SCGE HT VL++ G  V++ G+G+ G+LGH+       P+ +
Sbjct: 230 RESPCHVKLLRSQKVVYISCGEEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 420 EALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRSSSISFHT 462
             L    V ++  G   ++A     G+++ +G G R    + HT
Sbjct: 289 LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 13/223 (5%)

Query: 293 WGVGEHGKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           WG    G+ G G+ +    P+  + G ++ + V +V+ G +HS  + EDG +YT G    
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH---E 408
           G+LGH    S+           +  V+CGESH+L LS  G  ++S G+G+ G+LG    E
Sbjct: 64  GQLGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQ-LFSWGAGSDGQLGLTTIE 122

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
           D   VT P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S  +
Sbjct: 123 DA--VTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           P  V  L    +  V+ G +H  ALS    V+ WG N+ GQ G
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 17/247 (6%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
             ++++WG     Q+ L  +    + PRL  +     I  +  G +    L + G    +
Sbjct: 102 QGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTW 161

Query: 244 GK---GWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G+   G LGL      Q  P+RV     I  L+      AH   ++  G V+ WG    G
Sbjct: 162 GQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220

Query: 300 KLGHGNTLSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +LG  +   +  P   KL    L  ++V  +S G  H+A +T+ G ++T+G G  G+LGH
Sbjct: 221 QLGLSDERDRESPCHVKL----LRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 357 GDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
             +     P  V EL  S+V  ++CG  HTL        +++ G G  G+LG   T  V 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVK 336

Query: 415 TPKVIEA 421
            P  ++ 
Sbjct: 337 CPSPVKG 343



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 9/176 (5%)

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
           +V  V+CG +H++ L +DG  V++ G    G+LGH+  G  + P+ I AL    +  V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVAC 91

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G S S+AL+  G +F WG      LGL +   +   P L+  L+   I+ VS G+ H LA
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLA 151

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           L+   + + WG N+ GQ G          P +V  L+ + + Q+ AG   S A ++
Sbjct: 152 LAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSL 207


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 181/403 (44%), Gaps = 39/403 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     ++   G +  +G    G LG    +  P PK +    +  ++ +  C
Sbjct: 306 DVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIE-SLSNTNIELVAC 364

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G   +G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHT 424

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD KS   P  +  L  +  V  +CG  HT  + +   
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMV 484

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  +  L +    +V  G S +VAL+
Sbjct: 485 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALS 544

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
             G V+  G      LG   +     TPV    LS   + +++ G  HV  L+   EV+ 
Sbjct: 545 RLGHVYTMGSCVYGHLGNTQADGKLPTPVEGK-LSKSFVEEIACGAYHVAVLTSRTEVFT 603

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    G  G  + +N  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S     
Sbjct: 604 WGKGANGCLGHGD-TNDRNTPTLVEALKDKQVKSIACGTNFTAAICL---HKWVSGVDQS 659

Query: 556 LCVDVR-PHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFI 597
           +C   R P  F   R        C+  G  + FC   ++ + +
Sbjct: 660 MCSGCRVPFNFKRKRH------NCYNCG--LAFCHSCSNKKSV 694



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 151/329 (45%), Gaps = 79/329 (24%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++   V      P+L +SL  +NI  +  G++ T  +  +G L  +G
Sbjct: 323 QGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWG 382

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 383 DGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS-SIS-CGPWHTAVVTSSGQLFTFGDGT 440

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ I   L G R  Q + G  H+AAV E             G L+T
Sbjct: 441 FGVLGHGDRKSVSLPREIES-LKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 499

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGS---G 400
           WG+GD GRLGHGD +S+  PT V  L +     V+CG S T+ LS+ GH V++MGS   G
Sbjct: 500 WGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGH-VYTMGSCVYG 558

Query: 401 NLGK-------------------------------------------------LGHEDTG 411
           +LG                                                  LGH DT 
Sbjct: 559 HLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTN 618

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              TP ++EAL+  +V+ +  GT+F+ A+
Sbjct: 619 DRNTPTLVEALKDKQVKSIACGTNFTAAI 647



 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 137/302 (45%), Gaps = 32/302 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+A+V L V    C   H   VT +GEV+SWG    G+LGHG       PKLI
Sbjct: 295 LPK--ALESAVV-LDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLI 351

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLVT---E 370
              L    +  V+ G  H+ AVT  G LYTWG+G  ++G LGHG+  S   P  V    E
Sbjct: 352 E-SLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLE 410

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V ++SCG  HT V++  G  +++ G G  G LGH D   V+ P+ IE+L+  R  + 
Sbjct: 411 GIHVSSISCGPWHTAVVTSSGQ-LFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA 469

Query: 431 CAGTSFSVAL------------TWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         S   P  V  L    
Sbjct: 470 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPN 529

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +ALS+   VY  GS   G  G       +  P+ V G L    V +I  
Sbjct: 530 FCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKL--PTPVEGKLSKSFVEEIAC 587

Query: 533 GS 534
           G+
Sbjct: 588 GA 589


>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
 gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
          Length = 508

 Score =  130 bits (327), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 117/372 (31%), Positives = 177/372 (47%), Gaps = 36/372 (9%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           + WG N H ++ D    +   P    +P      +  I+ G + +  L + G +  +G+ 
Sbjct: 148 WVWGQNDHGELGDGTNKRRFAP--SPMPYLDQVGVSAIDGGGWFSLALLNDGSVWSWGRN 205

Query: 247 -WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA---HVLTVTSEGEVYSWGVGEHGKLG 302
            W  L + T +   +  P++   ++    K   A     L +  +G V+SWG  +  +LG
Sbjct: 206 DWAQLGDGTKET--RHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQLG 263

Query: 303 HGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G+T  +     + + GL G  VT V  G  HS A+ EDG +++WG G  G+LG G    
Sbjct: 264 AGDTGFNAHTIPVKVEGLSG--VTAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTNSD 321

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            +   +V  LS V AVS G  H+L L +DG TVWS G    G+LG        TP  + +
Sbjct: 322 HNAAAVVPGLSGVKAVSAGYRHSLALLRDG-TVWSWGYNAQGQLGDGTNTNRNTPVKVAS 380

Query: 422 LRKFRVRKVCAGT-------SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
           L   RV+ + A +       SFS+AL  DG V+ WG      LG   ++ S +TPV V+ 
Sbjct: 381 LGG-RVKAIAASSSNVFHDPSFSLALLEDGTVWSWGTNDWHQLG-DGTNTSRNTPVKVSD 438

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCV 527
           LS   +  ++ G  H LAL +   V+ WG+N  GQ G  D   +    P K+ G+    V
Sbjct: 439 LSG--VKAIAPGGRHSLALLKDGTVWGWGANDHGQVGTGDGTPDRYAAPVKIEGISH--V 494

Query: 528 RQICAGSLFSIA 539
           + I AG   SIA
Sbjct: 495 KAIAAGGWHSIA 506


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 28/323 (8%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGL 240
           I     ++++WG +   ++        S+P++      SN+  +  G+F T  +  +G L
Sbjct: 312 IVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNL 371

Query: 241 LVYGK-----GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
             +G      G+LG  +     +P+ V  +   V +S   C   H   V+S+G+++++G 
Sbjct: 372 YTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFGD 431

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLL 343
           G  G LGHG+  S  +P+ +   L G R  +VS G  H+AAV +             G L
Sbjct: 432 GTFGALGHGDRSSTSKPREVE-SLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKL 490

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           +TWG G+ G+LGHGD + R  P+ V+  + V  V+C  S T+ L+  G  V++MG+ + G
Sbjct: 491 FTWGAGERGQLGHGDEEPRLVPSCVSMPAGVCQVACAHSMTIALTVLGQ-VYTMGAADYG 549

Query: 404 KLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSS 457
           +LG     GK+        +R   ++++  G+   VAL+ +G V+ WG G+         
Sbjct: 550 QLGSPCSVGKLPI-HTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDI 608

Query: 458 ISFHTPVLVTGLSSHQIVDVSIG 480
              HTP LV  L   Q+  V  G
Sbjct: 609 KDRHTPTLVKALKHKQVKSVVCG 631



 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 153/372 (41%), Gaps = 79/372 (21%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           LPK +   AA+ +  ++ C   H + VT +G+++SWG    GKLGHG      +PK+I  
Sbjct: 288 LPKALDRIAALDAQIIA-CGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVI-D 345

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLV---TELS 372
            L    V  V+ G  H+ AVT  G LYTWG+  H  G LGHG   S   P  V    E  
Sbjct: 346 ALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESV 405

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            +  VSCG  HT  +S  G  +++ G G  G LGH D    + P+ +E+L+  R  KV  
Sbjct: 406 RISFVSCGPWHTAAVSSQG-KLFTFGDGTFGALGHGDRSSTSKPREVESLKGLRTLKVSC 464

Query: 433 GTSFSVAL------------TWDGLVFWWGLGLRS-------------SSIS-------- 459
           G   + A+            +  G +F WG G R              S +S        
Sbjct: 465 GIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAGVCQV 524

Query: 460 --------------------------FHTPVLVTGLSSHQIVDV--------SIGDSHVL 485
                                       +P  V  L  H   D+        + G  HV+
Sbjct: 525 ACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVV 584

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           ALS   +VY WG    GQ G  +  +    P+ V  L+   V+ +  GS F+ A   P  
Sbjct: 585 ALSSNGDVYTWGKGINGQLGHGDIKD-RHTPTLVKALKHKQVKSVVCGSNFT-AVICP-- 640

Query: 546 NSALSSAFTPLC 557
           +  +SSA   +C
Sbjct: 641 HKCVSSADQSIC 652



 Score = 89.7 bits (221), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 9/156 (5%)

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           +G L  +G   +G LG  +   + +P  V + A +  ++   C+ +  + +T  G+VY+ 
Sbjct: 487 SGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAGVCQVA---CAHSMTIALTVLGQVYTM 543

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G  ++G+LG   ++  + P    G +    + Q++ G  H  A++ +G +YTWG+G +G+
Sbjct: 544 GAADYGQLGSPCSVG-KLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQ 602

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVL 387
           LGHGD+K RHTPTLV  L    V +V CG + T V+
Sbjct: 603 LGHGDIKDRHTPTLVKALKHKQVKSVVCGSNFTAVI 638


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 159/322 (49%), Gaps = 29/322 (9%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSK------CSEAHVLTVTSEGEVYSWGVGEHG 299
           G LGL       + + + LE    S  V+K      C   H + V  +G VY+ G  + G
Sbjct: 10  GQLGLGG-----IDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGD 358
           +LGH    S++RP+ + G L  + +  VS G +H+ A+ + G +Y WG    G+LG  G 
Sbjct: 65  QLGHEK--SRKRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGT 121

Query: 359 LKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTT 415
            +    P  +  LSD+    V+CG  H+L LS+ G  V+S G    G+LG   +  K  +
Sbjct: 122 EEYTRVPRNIKSLSDIQIVQVACGYFHSLALSK-GSEVFSWGQNKYGQLGLGYEYKKQAS 180

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           P++I++L      ++ AG + S  LT  G VF WG      LGL   +  +  P L+  L
Sbjct: 181 PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY-VPNLLKSL 239

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            S +IV +S G+ H  AL++   V+ +G+   GQ G ++ ++ ++ P KV  L    V Q
Sbjct: 240 RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEIN-PRKVFELMGNIVTQ 298

Query: 530 ICAGSLFSIAYTVPPSNSALSS 551
           I  G   + A+   PS   + S
Sbjct: 299 IACGRQHTSAFV--PSTGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 17/274 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVYG- 244
           VYT GCN   Q+  E     SR R + + +    NI  +  G+  T  L+  G +  +G 
Sbjct: 55  VYTCGCNDLGQLGHEK----SRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGF 110

Query: 245 --KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G LGL+ T     +P+ +   + I  + V+ C   H L ++   EV+SWG  ++G+L
Sbjct: 111 AVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVA-CGYFHSLALSKGSEVFSWGQNKYGQL 169

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G    ++    I+  L G    Q++AG +HS  +T  G ++ WG    G+LG  D   
Sbjct: 170 GLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDEND 229

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KV 418
           R+ P L+  L    +  +SCGE HT  L+++G  V++ G+G  G+LGH  T     P KV
Sbjct: 230 RYVPNLLKSLRSQKIVYISCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTAHEINPRKV 288

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            E +     +  C     S  +   G ++ +GLG
Sbjct: 289 FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLG 322



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 108/230 (46%), Gaps = 21/230 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L   ++  VSCGE+HTL L+  G  V++ G    G+L
Sbjct: 60  CNDLGQLGHE--KSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQ-VYAWGFAVDGQL 116

Query: 406 GHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           G   T + T  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL     
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
              +P ++  L       ++ G +H   L+    V+ WG N  GQ G ++
Sbjct: 177 KQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLND 226



 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R     V + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WG      LG
Sbjct: 60  CNDLGQLGHEKSRK--RPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   QI AG   S   T+
Sbjct: 178 QASPQIIKSLLGIPFAQIAAGGAHSFVLTL 207



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 19/242 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDSTGG 239
            +VY WG  +  Q+     G         +P NI+         +  G F +  L     
Sbjct: 103 GQVYAWGFAVDGQL-----GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSE 157

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +  +G+   G LGL     +    ++      +  +      AH   +T  G V+ WG  
Sbjct: 158 VFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRN 217

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           + G+LG  +   +  P L+   L  +++  +S G  H+AA+T++G ++T+G G +G+LGH
Sbjct: 218 KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 357 GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
                   P  V EL    V  ++CG  HT         ++S G G  G+LG   T    
Sbjct: 277 NSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRK 336

Query: 415 TP 416
           +P
Sbjct: 337 SP 338



 Score = 49.3 bits (116), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 5/133 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330

Query: 305 NTLSQRRPKLIMG 317
            T +++ P  + G
Sbjct: 331 TTSNRKSPFPVKG 343


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 160/367 (43%), Gaps = 52/367 (14%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR------HIEAGQFCTFLLDSTGGLLV 242
           K Y WG N + Q+ D      S P +   P+ +        + AG++ +  L S G +  
Sbjct: 580 KAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVYA 639

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEA-------AIVSLSVSKCSEAHVLTVTSEGEVYS 292
           +G    G LG    T   +P RV   A        + ++ VS   E H L + S G VY+
Sbjct: 640 WGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDE-HSLALDSNGYVYA 698

Query: 293 WGVGEHGKLGHGNTLSQ------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           WG  ++G+LG+ +T         R P        G +  QVSAG  HS AV  DG  Y W
Sbjct: 699 WGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYAW 758

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVG---------AVSCGESHTLVLSQDGHTVWSM 397
           G  ++G+LG+    S   P  V + +             VS G SH+L +  DG+T ++ 
Sbjct: 759 GLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYT-YAW 817

Query: 398 GSGNLGKLGHEDTGKVTTPKVI-------EALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  N G+LG+ +T   T P  +       +A +  +   + AG   S+A+  +G  + WG
Sbjct: 818 GLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVGNNGYAYAWG 877

Query: 451 LGL-----RSSSISFHTPVLVTGLSSH-------QIVDVSIGDSHVLALSQYNEVYAWGS 498
             L       ++ +   PV V   +S        Q    S+GD H LA+      YAWG 
Sbjct: 878 WNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFSVGDHHSLAVGSNGYAYAWGE 937

Query: 499 NTMGQCG 505
           N+ GQ G
Sbjct: 938 NSYGQLG 944



 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 151/354 (42%), Gaps = 60/354 (16%)

Query: 219 SNIRHIEAG--QFCTFLLD----STGGLLVYGK---GWLGLANTTIQPLPK------RVP 263
           S IR  + G  ++ T++      S G    +G    G LG A T  +  P        VP
Sbjct: 554 SGIRFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVP 613

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-------RRPKLIM 316
            +   V +S  K    H L + S+G VY+WG  +HG+LG+ NT +        R P    
Sbjct: 614 TDFTYVQVSAGKW---HSLALGSDGYVYAWGSNQHGQLGN-NTKTNSSVPVRVRDPANPT 669

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--- 373
               G +  QVSAG  HS A+  +G +Y WG  D+GRLG+        P  V + +    
Sbjct: 670 DPNKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTD 729

Query: 374 ------VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI-------E 420
                    VS G  H+L +  DG+T ++ G  N G+LG+      + P  +       +
Sbjct: 730 PSKGLKAVQVSAGWHHSLAVGSDGYT-YAWGLNNYGQLGNSSKNSSSFPVRVRDFASPND 788

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQ-- 473
           A +  +  +V AG S S+A+  DG  + WGL        S+++    PV V   +S +  
Sbjct: 789 ANKGLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDA 848

Query: 474 -----IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-----PVDQPS 517
                   ++ G  H LA+      YAWG N   Q G    SN     PV  P+
Sbjct: 849 SKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPT 902



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 30/206 (14%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPS--------NIRHIEAGQFCTFLLDSTG-- 238
            Y WG N + Q+ +  +   S P R++   S            + AG   +  + S G  
Sbjct: 755 TYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYT 814

Query: 239 ---GLLVYGKGWLGLANTTIQPLPKRV-----PLEAA--IVSLSVSKCSEAHVLTVTSEG 288
              GL  YG+  LG +NT    +P RV     P +A+  + + +++   E H L V + G
Sbjct: 815 YAWGLNNYGQ--LGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGE-HSLAVGNNG 871

Query: 289 EVYSWGVGEHGKLGHGNTLSQ------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
             Y+WG   + +LG G T +       R P        G + T+ S G  HS AV  +G 
Sbjct: 872 YAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFSVGDHHSLAVGSNGY 931

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLV 368
            Y WGE  +G+LG G     + P  V
Sbjct: 932 AYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 31/171 (18%)

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS-FSVALTWDGLVFWWG 450
           +T W +      +LGHE T  +T P     +R  +V      T  FS+A+  DG  + WG
Sbjct: 527 NTSWRINPDKGSQLGHETT-TITPPDSTSGIRFNQVGGAKYYTYVFSLAVGSDGKAYAWG 585

Query: 451 ------LGLRSSSISFHTPVLV---TGL-SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
                 LG  +++ S  TP +V   TG+ +    V VS G  H LAL     VYAWGSN 
Sbjct: 586 DNTYGQLG-DATTNSRSTPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVYAWGSNQ 644

Query: 501 MGQCGQD------------NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            GQ G +            + +NP D P+K  GL+ +   Q+ AG   S+A
Sbjct: 645 HGQLGNNTKTNSSVPVRVRDPANPTD-PNK--GLKAI---QVSAGDEHSLA 689


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 29/374 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG         PK +    A +++ +  C
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLID-SLAHMNIELVAC 370

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    +V  G   +VALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550

Query: 442 WDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 551 TSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 610

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G    ++  + P+ V  L+D  VR +  G  F+ A  +   +  +S +   +
Sbjct: 611 GKGANGRLGHGG-TDDKNTPTLVEALKDKQVRSVVCGINFTAAICI---HKWVSGSDQSM 666

Query: 557 CVDVRPHTFTLIRE 570
           C   R   F L R+
Sbjct: 667 CSGCR-QPFNLRRK 679


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 144/281 (51%), Gaps = 21/281 (7%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYS 292
           L VY  GW     LG  N++    P+ V    A+  L + +  C ++H L VT  GEV S
Sbjct: 85  LQVYSWGWGDFGRLGHGNSSDVFTPQPVK---ALQGLKIKQIACGDSHCLAVTMAGEVQS 141

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G T     P+ I        V  ++AG  H+AAVTEDG LY WG G +G
Sbjct: 142 WGRNQNGQLGLGTTEDSLLPQKIQA-FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYG 200

Query: 353 RLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  V+  E   +  V+CG  HT+ +S  G+ +++ G    G+LGH D 
Sbjct: 201 NLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN-LYTYGWSKYGQLGHGDF 259

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
                P  +EAL+   + ++  G   ++ALT +G ++ WG      +G+ ++     +P 
Sbjct: 260 EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNND-DHSSPG 318

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            V+     +I  V+ G  H LALS+   V++WG  T GQ G
Sbjct: 319 QVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLG 359



 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 18/297 (6%)

Query: 254 TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
           ++   P   P    +VS   S     H + + +   + SWG GE G+LGHG+   +  P 
Sbjct: 3   SVMAAPDSPPQTVVLVSAGAS-----HSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVP- 56

Query: 314 LIMGGLYGKRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
            ++ G     +T V  G  H+ A +ED L +Y+WG GD GRLGHG+     TP  V  L 
Sbjct: 57  TVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQ 116

Query: 373 --DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              +  ++CG+SH L ++  G  V S G    G+LG   T     P+ I+A     V+ +
Sbjct: 117 GLKIKQIACGDSHCLAVTMAGE-VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMI 175

Query: 431 CAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHV 484
            AG   + A+T DG ++ WG G R  ++          P  V+ +   ++V V+ G  H 
Sbjct: 176 AAGAEHTAAVTEDGDLYGWGWG-RYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHT 234

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + +S    +Y +G +  GQ G  +F + +  P KV  L+D  + QI  G   ++A T
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VPHKVEALKDSTISQISGGWRHTMALT 290



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 23/319 (7%)

Query: 171 TPKLTYNIGDTDISVAHS----KVYTWGCN----LHHQILDEVRGKCSRPRLQSLPSNIR 222
            P +T  I   D + A+S    +VY+WG      L H    +V        LQ L   I+
Sbjct: 64  APAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL--KIK 121

Query: 223 HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
            I  G      +   G +  +G+   G LGL  T    LP+++    ++    ++  +E 
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAE- 180

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H   VT +G++Y WG G +G LG G+   +  P+ +   + G+++  V+ G  H+  V++
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSS-VEGEKMVLVACGWRHTITVSD 239

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSM 397
            G LYT+G   +G+LGHGD +    P  V  L D  +  +S G  HT+ L+ +G  ++  
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEG-KLYGW 298

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---- 453
           G    G++G  +    ++P  +      ++ +V  G   ++AL+    VF WG G     
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQL 358

Query: 454 -RSSSISFHTPVLVTGLSS 471
                +  +TPVL+  LSS
Sbjct: 359 GNGEIVDRNTPVLIDALSS 377



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 17/174 (9%)

Query: 217 LPSNIRHIEA--------GQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           LP  +  +E         G   T  +  +G L  YG    G LG  +     +P +V   
Sbjct: 212 LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-- 269

Query: 266 AAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+   ++S+ S    H + +TSEG++Y WG  + G++G GN      P  +      ++
Sbjct: 270 -ALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF-PEDQK 327

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
           ++QV+ G  H+ A++E   +++WG G  G+LG+G++  R+TP L+  LS  G+ 
Sbjct: 328 ISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSA 381


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 29/374 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG         PK +    A +++ +  C
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLID-SLAHMNIELVAC 370

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    +V  G   +VALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550

Query: 442 WDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 551 TSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 610

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G    ++  + P+ V  L+D  VR +  G  F+ A  +   +  +S +   +
Sbjct: 611 GKGANGRLGHGG-TDDKNTPTLVEALKDKQVRSVVCGINFTAAICI---HKWVSGSDQSM 666

Query: 557 CVDVRPHTFTLIRE 570
           C   R   F L R+
Sbjct: 667 CSGCR-QPFNLRRK 679


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 139/281 (49%), Gaps = 18/281 (6%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           + C E H L + S+G V+S G    G+LG        RP  I   L  + +  VS G  H
Sbjct: 42  AACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQA-LETQDIVSVSCGKEH 100

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELS--DVGAVSCGESHTLVLSQD 390
           S A+ ++G +++WG G  G+LG  + K   + P  + ELS   +  VSCG  H++ L+QD
Sbjct: 101 SLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQD 160

Query: 391 GHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           G  V+S G  N G+LG  E+     +P+ +++L    + +V AG + S AL++ G  + W
Sbjct: 161 GR-VFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGW 219

Query: 450 GL---------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           G          G + S+     P  +  L   Q+  +S GD H   L+Q  +V+ +GSN 
Sbjct: 220 GRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSND 279

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            GQ G+   S  +  P  V     V   QI  GS  ++AY+
Sbjct: 280 SGQLGRQLISG-MKGPQVVDSA--VSFSQIACGSYHTLAYS 317



 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 182/399 (45%), Gaps = 44/399 (11%)

Query: 191 YTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEA--GQFCTFLLDSTGGLLVYG 244
           Y WG N   Q+    +   + +  R R  +   N   ++A  G+  + LL S G +   G
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62

Query: 245 K---GWLGLANTTIQPLPKRV-PLEAA-IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
               G LG         P ++  LE   IVS+S   C + H L +  EG V+SWG G  G
Sbjct: 63  NNSCGQLGRKRCQKHGRPAQIQALETQDIVSVS---CGKEHSLAICKEGRVFSWGSGSDG 119

Query: 300 KLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +LG      LS   PK I   L   ++ QVS GH HS A+ +DG +++WG+ +HG+LG G
Sbjct: 120 QLGIREFKKLSSI-PKKI-DELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLG 177

Query: 358 D-LKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG----HEDT 410
           + + S+ +P  V  L  +    V+ G +H+  LS  G T +  G  N G+L      E  
Sbjct: 178 ENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSG-TSYGWGRNNAGQLALSGKKESA 236

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLS 470
            +++ P  I  L++ +V  +  G   +  LT DG VF +G    S+        L++G+ 
Sbjct: 237 EQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFG----SNDSGQLGRQLISGMK 292

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVV-------- 520
             Q+VD ++  S +   S +   Y+  +  +   G  +  +P+   QP   V        
Sbjct: 293 GPQVVDSAVSFSQIACGSYHTLAYSCTTGQVISFGCGSQRDPIGPLQPGDAVQNFNISNL 352

Query: 521 ----GLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
                  D  V+ I AG+  +   T+  ++S+ ++  +P
Sbjct: 353 ISSNDFTDFQVKDIFAGANANFVTTLQDTSSSGATGRSP 391



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 13/210 (6%)

Query: 342 LLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDVG-----AVSCGESHTLVLSQDGHTVW 395
           + Y WG+   G+LG   + +++         + +G       +CGE H+L+L  DG TVW
Sbjct: 1   MYYCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDG-TVW 59

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
           S G+ + G+LG +   K   P  I+AL    +  V  G   S+A+  +G VF WG     
Sbjct: 60  SCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG 119

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LG+R        P  +  LSS +I+ VS G  H +AL+Q   V++WG N  GQ G    
Sbjct: 120 QLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGEN 179

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                 P  V  L+ + + Q+ AG   S A
Sbjct: 180 VPSQASPQWVKSLDGIPLAQVAAGGAHSFA 209



 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 19/283 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           V++ G N   Q+  +   K  RP ++Q+L + +I  +  G+  +  +   G +  +G G 
Sbjct: 58  VWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGS 117

Query: 247 --WLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              LG+     +  +PK++   ++   + VS C   H + +  +G V+SWG   HG+LG 
Sbjct: 118 DGQLGIREFKKLSSIPKKIDELSSFKIIQVS-CGHYHSIALAQDGRVFSWGKNNHGQLGL 176

Query: 304 G-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           G N  SQ  P+ +   L G  + QV+AG +HS A++  G  Y WG  + G+L     K  
Sbjct: 177 GENVPSQASPQWVK-SLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKES 235

Query: 363 ----HTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
                 P  + EL    V  +SCG+ HT VL+QDG  V++ GS + G+LG +    +  P
Sbjct: 236 AEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGK-VFTFGSNDSGQLGRQLISGMKGP 294

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSI 458
           +V+++   F   ++  G+  ++A +   G V  +G G +   I
Sbjct: 295 QVVDSAVSF--SQIACGSYHTLAYSCTTGQVISFGCGSQRDPI 335


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 152/331 (45%), Gaps = 29/331 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E H   VT  G++Y+WG G+ G LGHGN +S   PK +   + G  V+ ++ G  H+A
Sbjct: 371 CGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTA 430

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ---- 389
            VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +    
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG 490

Query: 390 -------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                      +++ G G+  +LGH D      P  + AL +    +V  G S +VALT 
Sbjct: 491 SSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTT 550

Query: 443 DGLVFWWGLGLRSSSISFHT----PVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G  +     + H     P  V G L    + +++ G  HV  L+   EVY WG
Sbjct: 551 SGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 610

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             + G+ G  + ++  + P+ V  L+D  V+ I  GS F+ A  +    S +  +    C
Sbjct: 611 KGSNGRLGHGD-ADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGC 669

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFC 588
              +P  F   R        C+  G  + FC
Sbjct: 670 --RQPFNFKRKRH------NCYNCG--LVFC 690



 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 139/300 (46%), Gaps = 30/300 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+ IV L V    C   H + VT +GE +SWG    G+LGHG   + + PKLI
Sbjct: 302 LPK--ALESTIV-LDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLI 358

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-- 373
              L    +  V+ G  HS AVT  G LYTWG+GD G LGHG+  S   P  V  L +  
Sbjct: 359 -DALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGI 417

Query: 374 -VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            V +++CG  HT V++  G  +++ G G  G LGH D   V  P+ +++L+  R  +   
Sbjct: 418 HVSSIACGPYHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAAC 476

Query: 433 GTSFSVALT------------WDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIV 475
           G   + A+               G +F WG G +S            P  V  L      
Sbjct: 477 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFC 536

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGS 534
            V+ G S  +AL+    VY  GS   GQ G  +    V  P++V G L    V +I  G+
Sbjct: 537 QVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV--PTRVDGKLHKSFVEEIACGA 594



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 155/334 (46%), Gaps = 34/334 (10%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           ++WG     ++   V      P+L      +NI  +  G++ +  +  +G L  +GKG  
Sbjct: 334 FSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDF 393

Query: 249 GL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+    N     +PKRV      + +S   C   H   VTS G+++++G G  G LGHG+
Sbjct: 394 GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 453

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGEGDHGR 353
             S   P+ +   L G R  + + G  H+AAV E             G L+TWG+GD  R
Sbjct: 454 RKSVFIPREV-DSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 512

Query: 354 LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HED 409
           LGHGD + +  PT V  L   +   V+CG S T+ L+  GH V++MGS   G+LG  H D
Sbjct: 513 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH-VYTMGSPVYGQLGNPHAD 571

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPV 464
            GKV T +V   L K  V ++  G      LT    V+ WG G         +   ++P 
Sbjct: 572 -GKVPT-RVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPT 629

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           LV  L   Q+  ++ G +   A+     ++ W S
Sbjct: 630 LVESLKDKQVKSIACGSNFTAAVC----LHKWAS 659


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  130 bits (327), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 174/380 (45%), Gaps = 25/380 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
           A    + WG N   Q+ +      S P    LP  + I  + AG   +  L STG +L +
Sbjct: 54  ASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAW 113

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G+   G LG  +TT +  P  V L A   +++       H L +TS G V +WG   HG+
Sbjct: 114 GRNFSGQLGNGDTTNRSTPVDVDLPAG-TTITAIAAGAFHSLALTSAGTVLAWGENLHGQ 172

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG+G T +   P + +    G  +T V+AG  HS AVT  G +  WG+  +G+LG+G   
Sbjct: 173 LGNGGTTNMSTP-VGVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTT 231

Query: 361 SRHTPTLV-----TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
              TP  V     T ++ V A   G +H+L L+  G  + + G+   G+LG+ DT   +T
Sbjct: 232 GSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAAL-AWGNNADGQLGNGDTTNRST 290

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           P  ++      +  V AG   S+ALT  G V  WG  +       ++    TPV V   +
Sbjct: 291 PVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPT 350

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD---NFSNPVDQPSKVVGLEDVCV 527
              I  ++ G    LAL+    V AWG N  GQ G     N S PVD    V     V +
Sbjct: 351 GATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVD----VDLPAGVTI 406

Query: 528 RQICAGSLFSIAYTVPPSNS 547
             + AG   S+A    P+++
Sbjct: 407 TAVAAGGQHSMALVALPTST 426



 Score =  110 bits (275), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 109/360 (30%), Positives = 159/360 (44%), Gaps = 21/360 (5%)

Query: 147 ADDNIKPLGDRKSSNSNTDID-----STSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQI 201
            D++   LG+  ++ S+T +D      T+   +T     +    +   V  WG N   Q+
Sbjct: 62  GDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQL 121

Query: 202 LDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQ 256
            +      S P    LP  + I  I AG F +  L S G +L +G+   G LG   TT  
Sbjct: 122 GNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNM 181

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI- 315
             P  V L A  V+++       H L VTS G V +WG   +G+LG+G T     P  + 
Sbjct: 182 STPVGVSLPAG-VTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVD 240

Query: 316 -MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV 374
              G     V    AG +HS A+T  G    WG    G+LG+GD  +R TP  V   + V
Sbjct: 241 LPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGV 300

Query: 375 G--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
              AV+ G  H+L L+  G  V + G    G+LG+  T   +TP  ++      +  + A
Sbjct: 301 TITAVAAGGLHSLALTAAGAVV-AWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAA 359

Query: 433 GTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G  F +ALT  G V  WG  +        +I+  TPV V   +   I  V+ G  H +AL
Sbjct: 360 GFDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMAL 419



 Score =  101 bits (251), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 17/288 (5%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           +AA +SL+ ++   +    + +    ++WG    G+LG+G T     P  +     G  +
Sbjct: 35  QAATMSLAAAENGPS--AAIRASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPA-GTTI 91

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGES 382
           T V+AG  HS A+T  G +  WG    G+LG+GD  +R TP  V     + + A++ G  
Sbjct: 92  TAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAF 151

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+L L+  G TV + G    G+LG+  T  ++TP  +       +  V AG   S+A+T 
Sbjct: 152 HSLALTSAG-TVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTS 210

Query: 443 DGLVFWWG------LGLRSSSISFHTPV---LVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
            G V  WG      LG   ++    TPV   L  G +   +     G +H LAL+     
Sbjct: 211 TGAVLAWGDNSNGQLG-NGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAA 269

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            AWG+N  GQ G  + +N    P  V     V +  + AG L S+A T
Sbjct: 270 LAWGNNADGQLGNGDTTNR-STPVDVDLPAGVTITAVAAGGLHSLALT 316


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  130 bits (326), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 29/374 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG         PK +    A +++ +  C
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLID-SLAHMNIELVAC 370

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    +V  G   +VALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550

Query: 442 WDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 551 TSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 610

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G    ++  + P+ V  L+D  VR +  G  F+ A  +   +  +S +   +
Sbjct: 611 GKGANGRLGHGG-TDDKNTPTLVEALKDKQVRSVVCGINFTAAICI---HKWVSGSDQSM 666

Query: 557 CVDVRPHTFTLIRE 570
           C   R   F L R+
Sbjct: 667 CSGCR-QPFNLRRK 679


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  130 bits (326), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 29/374 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++++I  G     L+   G +  +G+   G LG         PK +    A +++ +  C
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLID-SLAHMNIELVAC 370

Query: 277 SEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H+
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHT 430

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ--- 389
           A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + +   
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMV 490

Query: 390 --------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                       +++ G G+ G+LGH D      P  + AL +    +V  G   +VALT
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550

Query: 442 WDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G      L +       PV V G L  + + ++S G  HV  L+   EVY W
Sbjct: 551 TSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTW 610

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G    ++  + P+ V  L+D  VR +  G  F+ A  +   +  +S +   +
Sbjct: 611 GKGANGRLGHGG-TDDKNTPTLVEALKDKQVRSVVCGINFTAAICI---HKWVSGSDQSM 666

Query: 557 CVDVRPHTFTLIRE 570
           C   R   F L R+
Sbjct: 667 CSGCR-QPFNLRRK 679


>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
 gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
           1279]
          Length = 593

 Score =  130 bits (326), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 173/356 (48%), Gaps = 27/356 (7%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKC-SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           + +V++WG N + Q+         S P   SL ++   I  G++    L + G ++  G+
Sbjct: 239 NGQVWSWGDNTYGQLGRATTSPSDSTPTQASLINDAVSISLGEYHAIALTNDGRVVTLGR 298

Query: 246 ---GWLG-----LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
              G LG      + T   P  +   L A I +++V +    H L +TSEG VY+WG  +
Sbjct: 299 DDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAV-QAGRYHSLALTSEGTVYAWGRND 357

Query: 298 HGKLGHGN-TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            G+LG G  T  Q  P LI G      V  ++AG  H+ A+  DG ++ WG+  +G LG 
Sbjct: 358 VGQLGLGTITAPQESPALIPGL---SDVIALAAGDDHTLALKADGSVWAWGDNPNGELGT 414

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           GD+     PT V+ L  V A++ G +H++ L  DG TV + G  N G+LG+        P
Sbjct: 415 GDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADG-TVRTWGYNNHGQLGNGSNTNSNVP 473

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLS 470
             +  L    V  + AG  F++A+  +G V  WG      LG  +++    TPV V G+ 
Sbjct: 474 VPVTGLTD--VVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTGDQTTPVDVQGIP 531

Query: 471 SHQIV-DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLE 523
           + + V  ++ G  H LAL     + AWGSN  GQ G D   N  D  +P  + G++
Sbjct: 532 TGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLG-DGTPNSSDTAKPVSITGVQ 586



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 18/229 (7%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDVGAVSCGE 381
           R   ++AG   SAA+  +G +++WG+  +G+LG      S  TPT  + ++D  ++S GE
Sbjct: 222 RANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQASLINDAVSISLGE 281

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGH---EDTGKVTTPKVIEALRKFRVRKVC--AGTSF 436
            H + L+ DG  V ++G  + G+LG    + +G  T P + + +    ++ V   AG   
Sbjct: 282 YHAIALTNDGRVV-TLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYH 340

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+ALT +G V+ WG      LGL + +    +P L+ GLS   ++ ++ GD H LAL   
Sbjct: 341 SLALTSEGTVYAWGRNDVGQLGLGTITAPQESPALIPGLS--DVIALAAGDDHTLALKAD 398

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             V+AWG N  G+ G  + + P   P+ V  L    V+ I AG   S+A
Sbjct: 399 GSVWAWGDNPNGELGTGDIT-PYSVPTAVSNLP--GVKAIAAGGNHSVA 444



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 136/296 (45%), Gaps = 25/296 (8%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           L +  PL   ++  +           +   G+V+SWG   +G+LG   T S         
Sbjct: 210 LTRTAPLTLRVLRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATT-SPSDSTPTQA 268

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH--GDLKSRHT-PTLVTELSDV 374
            L    V+ +S G  H+ A+T DG + T G  D+G+LG   GD    HT P L   +   
Sbjct: 269 SLINDAVS-ISLGEYHAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPA 327

Query: 375 G----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF--RVR 428
           G    AV  G  H+L L+ +G TV++ G  ++G+LG    G +T P+   AL      V 
Sbjct: 328 GIKAVAVQAGRYHSLALTSEG-TVYAWGRNDVGQLG---LGTITAPQESPALIPGLSDVI 383

Query: 429 KVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSH 483
            + AG   ++AL  DG V+ WG      L +  I+ +  P  V+ L    +  ++ G +H
Sbjct: 384 ALAAGDDHTLALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPG--VKAIAAGGNH 441

Query: 484 VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +AL     V  WG N  GQ G  + +N  + P  V GL DV    I AG  F++A
Sbjct: 442 SVALLADGTVRTWGYNNHGQLGNGSNTN-SNVPVPVTGLTDVV--GIAAGYEFTLA 494


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 136/287 (47%), Gaps = 34/287 (11%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           P P RV          +S C   H L ++  G +Y+WGVG +G LG G+T     P  ++
Sbjct: 170 PKPARVRFRDKCKIARIS-CGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVL 228

Query: 317 GGL------------YGKR------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G              G+R      VT  +AG  HS A T DG L+TWG G +GRLG G 
Sbjct: 229 LGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGH 288

Query: 359 LKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            +   +P +V  +   DV  VS G+SH+  + + G  +++ GSG  G+LGH D G++  P
Sbjct: 289 NRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQG-VLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--RSSSISFHTPVLVTGLSSH-- 472
           + +E      V +V  GT  ++ALT  G VF WG GL             +VT +  H  
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVT-VPKHLS 406

Query: 473 ----QIVDVSIGDSHVLALSQYNEVYAW---GSNTMGQCGQDNFSNP 512
                +++V+ G  H  A++   ++  W   GS+ +G   Q N   P
Sbjct: 407 DIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFP 453



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 157/332 (47%), Gaps = 28/332 (8%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           ++ +  G+  T  L  TG + V+G   +G LGL     +   + V L+     +    C 
Sbjct: 503 LQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACG 562

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM----------GGLYGKRVTQV 327
             H L V   G+V++WG  + G+LG G       P  +           G  Y   +T  
Sbjct: 563 SKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITSN 622

Query: 328 SAGHSHSAAV---TEDGLLYTWGEGDHGRLGHG-DLKSRH--TPTLVTELSDVGAVSCGE 381
               + S A+   TE G L+TWG  + G+LG G D+ S    TP  V     V A S G 
Sbjct: 623 GGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCACSLGT 682

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           SH L ++  G   ++ G+G  G+LG   T     P   +  +  R+R V AG S S+AL+
Sbjct: 683 SHALAITARGE-CYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALS 741

Query: 442 WDGLVFWWGLGLRS-SSISFHTPVLVTGLSS----HQIVDVSIGDSHVLALSQYNEVYAW 496
            DG ++ WG    + S+ ++++P +   L S     ++  ++  + H LA+++  EV+AW
Sbjct: 742 MDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAW 801

Query: 497 GSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVC 526
           G N + Q  CG+   +  +D+P  + GL +VC
Sbjct: 802 GDNKLYQTGCGKRQ-AERLDRPEMIAGLPNVC 832



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 164/440 (37%), Gaps = 130/440 (29%)

Query: 208 KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPL 264
           K +R R +     I  I  G   T  L   G L  +G G    LG  +T+    P RV L
Sbjct: 171 KPARVRFRD-KCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLL 229

Query: 265 EAAIVS----------------LSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            +   S                + V+ C+    H +  TS+G +++WG G +G+LG G+ 
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP- 365
                P ++   +  + V  VSAG SHSA +   G+LYTWG G  GRLGHGD      P 
Sbjct: 290 RGSLSPAVV-DYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPR 348

Query: 366 ---------------------------------------------------TLVTELSDV 374
                                                              T+   LSD+
Sbjct: 349 KVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDI 408

Query: 375 GA----VSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF---- 425
                 V+ G  H+  ++  G   VW +G  +  +LGH D      PK +  LR      
Sbjct: 409 EVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSS--RLGHGDQQNQPFPKYVADLRNRMYVA 466

Query: 426 ---------RVRK--------------------------VCAGTSFSVALTWDGLVFWWG 450
                    R+R+                          +  G + +VALT  G V+ WG
Sbjct: 467 DLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWG 526

Query: 451 ------LGL-RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
                 LGL        + PV +   S+  I  ++ G  H LA++QY +V+AWG+N  GQ
Sbjct: 527 SNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIACGSKHCLAVAQYGDVFAWGANDDGQ 585

Query: 504 CGQDNFSNPVDQPSKVVGLE 523
            G      P  +P+ V  L 
Sbjct: 586 LGL-GVLRPSFEPAAVTALR 604



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 169/415 (40%), Gaps = 87/415 (20%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQS-LPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++TWG   + ++ L   RG  S   +   L  ++  + AG   +  +D  G L  +G G 
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGG 332

Query: 248 LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G      Q   P+P++V     +  L V+ C   H L +T +G V++WG G    LG G
Sbjct: 333 FGRLGHGDQGEIPVPRKVEGFGGVPVLQVA-CGTFHTLALTHKGTVFAWGAGLALGLGEG 391

Query: 305 NTLSQRR---PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
                     PK +        V  V+AG  HSAAVT  G L  WG G   RLGHGD ++
Sbjct: 392 EDGGGGMVTVPKHLSD--IEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQN 449

Query: 362 RHTPTLVTELSD-----------------------------------------VGAVSCG 380
           +  P  V +L +                                         + ++ CG
Sbjct: 450 QPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCG 509

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR----KFRVRKVCAGTSF 436
           E+HT+ L+  G  VW  GS + G+LG    G+       E ++       +R++  G+  
Sbjct: 510 ENHTVALTGTG-AVWVWGSNDEGQLG---LGEQVEEDQYEPVKLDCFSTPIRRIACGSKH 565

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH------- 483
            +A+   G VF WG      LGL     SF  P  VT L   Q +DV  GD +       
Sbjct: 566 CLAVAQYGDVFAWGANDDGQLGLGVLRPSFE-PAAVTAL--RQAIDVFCGDDYSACITSN 622

Query: 484 ------VLAL---SQYNEVYAWGSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVCV 527
                  LAL   +++ +++ WG+   G+   G+D  S  +  P KV     VC 
Sbjct: 623 GGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCA 677



 Score = 49.3 bits (116), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 82/198 (41%), Gaps = 35/198 (17%)

Query: 324 VTQVSAGHSHSAAVTEDG---LLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVGA--V 377
           V +V+ G  H+  V   G    L  WG+  +  LG G + + R  P LV   S  G   V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107

Query: 378 SCGESHTLVL----SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           SCG +++ VL     Q G  V++ G GN G+LG+        PK  +A    R +   AG
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGY--------PKS-KAEGGARQQGDDAG 158

Query: 434 TSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
                  +W           + + + F     +  +S         G  H LALS    +
Sbjct: 159 DGQEDGPSW--------FTPKPARVRFRDKCKIARIS--------CGADHTLALSDGGAL 202

Query: 494 YAWGSNTMGQCGQDNFSN 511
           YAWG  + G  GQ + S+
Sbjct: 203 YAWGVGSYGNLGQGDTSD 220


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 139/287 (48%), Gaps = 21/287 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G  + G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 169 CGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWH 228

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD +S   P  V  L  +  V  +CG  HT  + +  
Sbjct: 229 TALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM 288

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +    +V  G   +VAL
Sbjct: 289 AGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVAL 348

Query: 441 TWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L ++      PV V G L  + + ++S G  HV  L+   EVY 
Sbjct: 349 TTSGHVYTMGSAVYGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 408

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           WG    G+ G  + ++  + P+ V  L+D  VR +  G  F+ A  +
Sbjct: 409 WGKGANGRLGHGD-TDDKNTPTLVEALKDKQVRSVVCGINFTAAICI 454



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 154/329 (46%), Gaps = 32/329 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             ++Y+WG     ++   V    S+P+L    S  NI  +  G++ T  +  +G L  +G
Sbjct: 128 QGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWG 187

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PK V  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 188 DGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVS-SIS-CGPWHTALVTSAGQLFTFGDGS 245

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G ++T
Sbjct: 246 FGVLGHGDRESISVPREVE-SLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFT 304

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD +++  PT V  L   +   V+CG   T+ L+  GH V++MGS   G
Sbjct: 305 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGH-VYTMGSAVYG 363

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           +LG+     +   +V   L K  V ++  G      LT    V+ WG G         + 
Sbjct: 364 QLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTD 423

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             +TP LV  L   Q+  V  G +   A+
Sbjct: 424 DKNTPTLVEALKDKQVRSVVCGINFTAAI 452



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 24/241 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V  +S G  H+A VT+ G +Y+WGE   GRLGHG       P L+  LS  ++  V+CGE
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGE 171

Query: 382 SHT--LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSV 438
            HT  + LS D +T W  G+   G LGH +      PK +   L    V  +  G   + 
Sbjct: 172 YHTCAVTLSGDLYT-WGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTA 230

Query: 439 ALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ---- 489
            +T  G +F +G G           S   P  V  L   + V  + G  H  A+ +    
Sbjct: 231 LVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAG 290

Query: 490 --------YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                     +++ WG    G+ G  +    +  P+ V  L +    Q+  G   ++A T
Sbjct: 291 NSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCQVACGHCLTVALT 349

Query: 542 V 542
            
Sbjct: 350 T 350


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score =  130 bits (326), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 17/234 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + + ++G V++WG  + G+LG G T ++  P  + G      V  ++AG  H+ A+  
Sbjct: 237 HTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGI---SDVVAIAAGMYHTVALKN 293

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRH--TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           DG ++ WG+ +H +LG+   K  +  TP  V  +SDV A++ G S+T+VL  DG TVW+ 
Sbjct: 294 DGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDG-TVWAW 352

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G    GKLG   T    TP  +  +    V+ + AG   +V L  DG V+ WG      L
Sbjct: 353 GVNEYGKLGDGTTNNSFTPVQVNGISN--VKAIAAGAYHTVVLKNDGTVWTWGYNHYGEL 410

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           G   +++   TPV V G+S   +  ++ G  H +AL     V+AWG N  G+ G
Sbjct: 411 G-NGTTVDSSTPVQVKGISD--VKAIAAGACHTVALKNDGTVWAWGCNYYGELG 461



 Score =  116 bits (291), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 19/256 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           ++ I AG + T  L + G +  +G    G LG   TT + +P +V   + +V+++     
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISDVVAIAAGM-- 285

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAA 336
             H + + ++G V++WG  EH +LG+  T  +     + + G+    V  ++AG S++  
Sbjct: 286 -YHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGI--SDVKAIAAGASYTVV 342

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  DG ++ WG  ++G+LG G   +  TP  V  +S+V A++ G  HT+VL  DG TVW+
Sbjct: 343 LKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYHTVVLKNDG-TVWT 401

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            G  + G+LG+  T   +TP  ++ +    V+ + AG   +VAL  DG V+ WG      
Sbjct: 402 WGYNHYGELGNGTTVDSSTPVQVKGISD--VKAIAAGACHTVALKNDGTVWAWGCNYYGE 459

Query: 451 LGLRSSSISFHTPVLV 466
           LG   +++   TPV V
Sbjct: 460 LG-NGTAVDSSTPVQV 474



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 19/198 (9%)

Query: 131 DLIRSACLVYLILVTLADDNIKPLGDRKSS---NSNTDIDSTSTPKLTYNIGDTDISVAH 187
           D++  A  +Y  +    D  +   GD +     N  T  +  STP     I D     A 
Sbjct: 277 DVVAIAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAG 336

Query: 188 SK----------VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDST 237
           +           V+ WG N + ++ D        P   +  SN++ I AG + T +L + 
Sbjct: 337 ASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAIAAGAYHTVVLKND 396

Query: 238 GGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           G +  +G    G LG   T     P +V   + + +++   C   H + + ++G V++WG
Sbjct: 397 GTVWTWGYNHYGELGNGTTVDSSTPVQVKGISDVKAIAAGAC---HTVALKNDGTVWAWG 453

Query: 295 VGEHGKLGHGNTLSQRRP 312
              +G+LG+G  +    P
Sbjct: 454 CNYYGELGNGTAVDSSTP 471



 Score = 52.0 bits (123), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           V+ + AG   +VAL  DG V+ WG      LG   ++ +   PV V G+S   +V ++ G
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLG-DGTTTNRTIPVQVKGISD--VVAIAAG 284

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV-DQPSKVVGLEDVCVRQICAGSLFSI 538
             H +AL     V+AWG N   Q G +         P +V G+ D  V+ I AG+ +++
Sbjct: 285 MYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISD--VKAIAAGASYTV 341


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 163/355 (45%), Gaps = 23/355 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P+R     A   L  +   E H L + S GE++S G    G+LG         PK I   
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRT- 71

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELSDVG-- 375
           L   RV  VS G  HS AV   G ++ WG G  G+LG G+ K  +  PT +  L+ +   
Sbjct: 72  LDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKII 131

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            VSCG  H+L LS+ G  V+S GS + G+LG  ++     +P+ + +L    + +V AG 
Sbjct: 132 QVSCGHYHSLALSEGGQ-VFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISF--HTPVLVTGLSSHQIVDVSIGDSHVLA 486
           + S AL+  G  F WG      L LR +++    H P  +  L +  ++ +S G  H   
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAV 250

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           L+Q  +V+ +G N+ GQ G    +   + P  V G+ D  V QI  GS  ++AY V  + 
Sbjct: 251 LTQTGKVFTFGGNSYGQLGHSPTAEK-EGPQLVEGI-DGLVSQIDCGSYHTLAY-VYTTG 307

Query: 547 SALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCSK----VTHAQFI 597
             +S    P C     H   L       +++     D + F  K     THA ++
Sbjct: 308 KVVSFGRGPSCKSSPTHPKALTENV--DFTSPISANDLVDFQVKHIFAGTHANYV 360



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 151/325 (46%), Gaps = 33/325 (10%)

Query: 199 HQILDEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG---K 245
           H   D  +G+  R  +Q    P  IR ++         G+  +  +   G +  +G   +
Sbjct: 45  HSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSE 104

Query: 246 GWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G LG+     I  +P ++     I  + VS C   H L ++  G+V+SWG   HG+LG G
Sbjct: 105 GQLGVGEFKEINLIPTKIKTLTGIKIIQVS-CGHYHSLALSEGGQVFSWGSNSHGQLGLG 163

Query: 305 NTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HGDLK 360
               SQ  P+ +   L G  +TQV+AG +HS A++  G  + WG  + G+L    +    
Sbjct: 164 KECPSQASPQRVR-SLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPV 222

Query: 361 SRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             H P  +  L ++G   +SCG  HT VL+Q G  V++ G  + G+LGH  T +   P++
Sbjct: 223 QSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGK-VFTFGGNSYGQLGHSPTAEKEGPQL 281

Query: 419 IEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVL------VTGLSS 471
           +E +    V ++  G+  ++A  +  G V  +G G    S   H   L       + +S+
Sbjct: 282 VEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFGRGPSCKSSPTHPKALTENVDFTSPISA 340

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAW 496
           + +VD  +   H+ A +  N V  +
Sbjct: 341 NDLVDFQV--KHIFAGTHANYVTTY 363



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 17/173 (9%)

Query: 189 KVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G    +G 
Sbjct: 148 QVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGS 207

Query: 246 ---GWLGLANTTIQPLPKRVPLE-AAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEHG 299
              G L L    + P+    P    A+ +L V    C   H   +T  G+V+++G   +G
Sbjct: 208 NNAGQLALRQNNV-PVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYG 266

Query: 300 KLGHGNTLSQRRPKLIMG--GLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           +LGH  T  +  P+L+ G  GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 267 QLGHSPTAEKEGPQLVEGIDGL----VSQIDCGSYHTLAYVYTTGKVVSFGRG 315


>gi|196007064|ref|XP_002113398.1| hypothetical protein TRIADDRAFT_57517 [Trichoplax adhaerens]
 gi|190583802|gb|EDV23872.1| hypothetical protein TRIADDRAFT_57517 [Trichoplax adhaerens]
          Length = 509

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 165/371 (44%), Gaps = 39/371 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG N  +Q+      K   P +  + S+ +   I  G   ++ + S+G L   GK  
Sbjct: 140 VFAWGNNQSYQLGSCQFEKLRVPAINKILSDYKPISIAGGTSNSYFVSSSGKLYELGKSM 199

Query: 248 LG--LAN----------TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +   + N          TT QP+          V+  +      + + +TS G++Y+WG 
Sbjct: 200 ITKPVLNDDYSHHQKILTTPQPV---FGFSNVFVTQVMVHHDGEYAMAITSNGQLYTWGC 256

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           G    LG+  T S   P   +  L GK + Q S   +H AAVT  G LYTWGEG +G LG
Sbjct: 257 GP---LGNNTTCSTAHP---VKALLGKEIIQASCSVTHCAAVTSKGKLYTWGEGKYGGLG 310

Query: 356 HGDLKSRHTPTLVTELSDVGA--VSCGESH----TLVLSQDGHTVWSMGSGNLGKLGHED 409
           H D K    P  V    D     V+CG ++    T+ ++ DG  VW+ G    GKLG ++
Sbjct: 311 HPDCKCHIKPKKVKAFKDKKVKMVACGGTNNYNFTVAITTDGQ-VWTWGDCKCGKLGRDN 369

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-------LRSSSISFHT 462
                 P  +++L    + KV      ++AL+ DG +F WG G        R   I F  
Sbjct: 370 GQSTHLPAALDSLNDKNIVKVSCSCECTLALSNDGELFAWGYGDFLHPGFFRDDIIPF-- 427

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           P  V   +  ++ D ++G S+ +  ++  +VY WG N  GQ G     + + Q   V  L
Sbjct: 428 PYKVEMFNDIKVADFAVGSSNGIICTKDGKVYTWGYNDYGQLGNGFRQDSLSQLCPVTAL 487

Query: 523 EDVCVRQICAG 533
           +   + ++  G
Sbjct: 488 QYFKLDRVACG 498



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 126/315 (40%), Gaps = 69/315 (21%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
            ++ ++YTWGC                                                 
Sbjct: 246 TSNGQLYTWGC------------------------------------------------- 256

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   T     P +  L   I+  S   CS  H   VTS+G++Y+WG G++G LGH 
Sbjct: 257 -GPLGNNTTCSTAHPVKALLGKEIIQAS---CSVTHCAAVTSKGKLYTWGEGKYGGLGHP 312

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAG---HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           +     +PK +      K       G   ++ + A+T DG ++TWG+   G+LG  + +S
Sbjct: 313 DCKCHIKPKKVKAFKDKKVKMVACGGTNNYNFTVAITTDGQVWTWGDCKCGKLGRDNGQS 372

Query: 362 RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            H P  +  L+D  +  VSC    TL LS DG  +++ G G+    G      +  P  +
Sbjct: 373 THLPAALDSLNDKNIVKVSCSCECTLALSNDGE-LFAWGYGDFLHPGFFRDDIIPFPYKV 431

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSS 471
           E     +V     G+S  +  T DG V+ WG         G R  S+S   P  VT L  
Sbjct: 432 EMFNDIKVADFAVGSSNGIICTKDGKVYTWGYNDYGQLGNGFRQDSLSQLCP--VTALQY 489

Query: 472 HQIVDVSIGDSHVLA 486
            ++  V+ G SHV A
Sbjct: 490 FKLDRVACGFSHVFA 504



 Score = 47.4 bits (111), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 76/178 (42%), Gaps = 10/178 (5%)

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSC--GESHTLVLSQDGHTVW 395
           ++D  ++ WG     +LG    +    P +   LSD   +S   G S++  +S  G  ++
Sbjct: 135 SQDCSVFAWGNNQSYQLGSCQFEKLRVPAINKILSDYKPISIAGGTSNSYFVSSSGK-LY 193

Query: 396 SMGSGNLGKLGHEDTGK-----VTTPKVIEALRKFRVRKVCA--GTSFSVALTWDGLVFW 448
            +G   + K    D        +TTP+ +       V +V       +++A+T +G ++ 
Sbjct: 194 ELGKSMITKPVLNDDYSHHQKILTTPQPVFGFSNVFVTQVMVHHDGEYAMAITSNGQLYT 253

Query: 449 WGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           WG G   ++ +  T   V  L   +I+  S   +H  A++   ++Y WG    G  G 
Sbjct: 254 WGCGPLGNNTTCSTAHPVKALLGKEIIQASCSVTHCAAVTSKGKLYTWGEGKYGGLGH 311


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 29/365 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
           A   ++TWG N   Q+ D       RP    +P  + +  + AG + + ++   G +  +
Sbjct: 516 ADGTLWTWGDNNTGQLGDGT--TVDRPIPTQVPGVTGVVSVAAGLYHSLVVKVDGTVWAW 573

Query: 244 G---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G   +G LG   TTI+P+P + P    +V+++       H L + ++G V++WG   HG+
Sbjct: 574 GSNYEGQLGGGTTTIRPVPSQTPNLTGVVAITAGLY---HSLALKTDGTVWAWGYNLHGQ 630

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG+GNT +Q+ P  + G   G     + AG  HS A+  DG ++TWG    G+LG G   
Sbjct: 631 LGNGNTTTQQVPTQVPGFSGG---VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTT 687

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           SR TPT V   + V  ++ GE H++ L  DG T W+ GS + G+LG         P +  
Sbjct: 688 SRTTPTQVAGFTGVSFLAAGEFHSVALRTDG-TAWAWGSNDKGQLGDGSARWHYAPTLS- 745

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
             R    R + AG  F+ A   DG V+ WG      LG   ++++  +P  V+GL+   +
Sbjct: 746 --RLVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLG-DGTTLATRSPAQVSGLT--DV 800

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             ++ G+ HV+ +     V+ WG+N  GQ G D  +     P++V GL  V    + AG 
Sbjct: 801 EGLAAGEGHVVVVKMDGTVWTWGNNAKGQLG-DGTTTRRLVPTQVPGLTGVVA--VAAGY 857

Query: 535 LFSIA 539
             S+A
Sbjct: 858 AHSLA 862



 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 173/363 (47%), Gaps = 22/363 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +A+ +V+TWG N+  Q+ +      + P+          + AG++        G +  +G
Sbjct: 365 MANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWG 424

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              KG LG   T  + LP +VP    +V+++    S    L + ++G V++WG   +G+L
Sbjct: 425 DNAKGQLGDGTTAQRLLPTQVPGLTNMVAVAAGHHSS---LALKADGTVWAWGDNANGQL 481

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G+G+T  +  P  + G L G  V  ++AG  H+ AV  DG L+TWG+ + G+LG G    
Sbjct: 482 GNGSTTDRSNPTQVPG-LTG--VVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVD 538

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R  PT V  ++ V +V+ G  H+LV+  DG TVW+ GS   G+LG   T     P     
Sbjct: 539 RPIPTQVPGVTGVVSVAAGLYHSLVVKVDG-TVWAWGSNYEGQLGGGTTTIRPVPSQTPN 597

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVD 476
           L    V  + AG   S+AL  DG V+ WG  L       ++ +   P  V G S    V 
Sbjct: 598 LTG--VVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG--VS 653

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           +  G  H LA+     V+ WG N  GQ G D  +     P++V G   V    + AG   
Sbjct: 654 LGAGIYHSLAIKTDGSVWTWGYNYRGQLG-DGTTTSRTTPTQVAGFTGVSF--LAAGEFH 710

Query: 537 SIA 539
           S+A
Sbjct: 711 SVA 713



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 130/260 (50%), Gaps = 14/260 (5%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           L +      H L V S+G V++WG   +G+LG+G+   QR P     GL+   ++ V AG
Sbjct: 50  LGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAW-GLW--NISAVGAG 106

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
             HS A+  DG ++TWG  + G+LG G    R  P  V  L +V  V+ G SH+L L  D
Sbjct: 107 DLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEVVRVAAGFSHSLALKTD 166

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G TVW+ GS   G+LG   T +   P  ++ L    ++ + AG + S+AL   G V+ WG
Sbjct: 167 G-TVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT--IKAIAAGNAHSLALDGTGRVWAWG 223

Query: 451 LG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                 L  ++  +   P LV GL++     +S G +H L        + WG+NT GQ G
Sbjct: 224 SNSNGQLGDTTAGYRMLPALVPGLTN--ATGLSAGSNHSLVRQADGTTWVWGANTYGQLG 281

Query: 506 QDNFSNPVDQPSKVVGLEDV 525
            D  +     P +V GL  V
Sbjct: 282 -DGTTTSRSAPQQVSGLAGV 300



 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 166/361 (45%), Gaps = 25/361 (6%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--- 244
              V+TWG N   Q+ D      + P   +  + +  + AG+F +  L + G    +G   
Sbjct: 668  GSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSND 727

Query: 245  KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            KG LG  +      P    L  A    +  + + A      S+G V++WG   +G+LG G
Sbjct: 728  KGQLGDGSARWHYAPTLSRLVGARGLAAGDRFTAAR----KSDGTVWAWGDNTYGQLGDG 783

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
             TL+ R P  + G L    V  ++AG  H   V  DG ++TWG    G+LG G    R  
Sbjct: 784  TTLATRSPAQVSG-L--TDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLV 840

Query: 365  PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
            PT V  L+ V AV+ G +H+L L  DG TVW  G    G+LG   T +   P   + L  
Sbjct: 841  PTQVPGLTGVVAVAAGYAHSLALKADG-TVWGWGENIYGQLGDGTTTQRVAPTQAQGLTV 899

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
              V  + +GT   +A   DG ++ WG      LG+ +++     P LV  LS   +V +S
Sbjct: 900  --VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRL-APTLVPSLSG--VVSLS 954

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
                H LAL     V+AWG N+ GQ G D  +     P++   L    V+ + AG  +S+
Sbjct: 955  ATHQHSLALKPDGTVWAWGYNSNGQLG-DGTTTTRHVPTQAPSLS--SVKAVSAGFEYSL 1011

Query: 539  A 539
            A
Sbjct: 1012 A 1012



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 156/320 (48%), Gaps = 24/320 (7%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHV 281
           + AG+  T  + S G +  +G    G L N ++Q   +RVP+ A  + ++S     + H 
Sbjct: 53  VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQD--QRVPVRAWGLWNISAVGAGDLHS 110

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           L + S+G V++WG    G+LG G T  ++ P  + G   G+ V +V+AG SHS A+  DG
Sbjct: 111 LAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPG--LGE-VVRVAAGFSHSLALKTDG 167

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            ++ WG    GRLG G    R  P  V  L  + A++ G +H+L L   G  VW+ GS +
Sbjct: 168 TVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGR-VWAWGSNS 226

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
            G+LG    G    P ++  L       + AG++ S+    DG  + WG      LG   
Sbjct: 227 NGQLGDTTAGYRMLPALVPGLTN--ATGLSAGSNHSLVRQADGTTWVWGANTYGQLG-DG 283

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIG-DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           ++ S   P  V+GL+    VD  +G + H L L     V+ WGSN  GQ G D       
Sbjct: 284 TTTSRSAPQQVSGLAG---VDGVLGAELHSLVLKSDGTVWTWGSNQRGQLG-DGTQEQRL 339

Query: 515 QPSKVVGLEDVCVRQICAGS 534
            P +V+GL  V    + AGS
Sbjct: 340 VPVQVMGLSGVVA--VAAGS 357



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 168/377 (44%), Gaps = 27/377 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            +V+ WG N + Q+ D   G    P L    +N   + AG   + +  + G   V+G   
Sbjct: 217 GRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGANT 276

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   TT +  P++V   A +  +     +E H L + S+G V++WG  + G+LG G
Sbjct: 277 YGQLGDGTTTSRSAPQQVSGLAGVDGV---LGAELHSLVLKSDGTVWTWGSNQRGQLGDG 333

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               +  P  +M GL G  V  V+AG   HS AV  +G ++TWG    G+LG G      
Sbjct: 334 TQEQRLVPVQVM-GLSG--VVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSA 390

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P     L +  +V+ G  H L    DG TVW+ G    G+LG   T +   P  +  L 
Sbjct: 391 VPKRSHALVERTSVAAGRYHGLASKPDG-TVWAWGDNAKGQLGDGTTAQRLLPTQVPGLT 449

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
                 V AG   S+AL  DG V+ WG      LG   S+     P  V GL+   +V +
Sbjct: 450 NMVA--VAAGHHSSLALKADGTVWAWGDNANGQLG-NGSTTDRSNPTQVPGLTG--VVSI 504

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQD-NFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           + G  H LA+     ++ WG N  GQ G       P+  P++V G+  V    + AG   
Sbjct: 505 AAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPI--PTQVPGVTGVV--SVAAGLYH 560

Query: 537 SIAYTVPPSNSALSSAF 553
           S+   V  +  A  S +
Sbjct: 561 SLVVKVDGTVWAWGSNY 577



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 170/368 (46%), Gaps = 33/368 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           A    + WG N + Q+ D      S P+  S  + +  +   +  + +L S G +  +G 
Sbjct: 265 ADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGS 324

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             +G LG      + +P +V   + +V  +V+  S  H + V + GEV++WG    G+LG
Sbjct: 325 NQRGQLGDGTQEQRLVPVQVMGLSGVV--AVAAGSGQHSVAVMANGEVWTWGHNVEGQLG 382

Query: 303 HGNTLSQRRPK----LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G++     PK    L+         T V+AG  H  A   DG ++ WG+   G+LG G 
Sbjct: 383 EGSSSYSAVPKRSHALV-------ERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGT 435

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              R  PT V  L+++ AV+ G   +L L  DG TVW+ G    G+LG+  T   + P  
Sbjct: 436 TAQRLLPTQVPGLTNMVAVAAGHHSSLALKADG-TVWAWGDNANGQLGNGSTTDRSNPTQ 494

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           +  L    V  + AG   ++A+  DG ++ WG      LG   +++    P  V G++  
Sbjct: 495 VPGLTG--VVSIAAGPGHALAVKADGTLWTWGDNNTGQLG-DGTTVDRPIPTQVPGVTG- 550

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS-NPVDQPSKVVGLEDVCVRQIC 531
            +V V+ G  H L +     V+AWGSN  GQ G    +  PV  PS+   L  V    I 
Sbjct: 551 -VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPV--PSQTPNLTGVVA--IT 605

Query: 532 AGSLFSIA 539
           AG   S+A
Sbjct: 606 AGLYHSLA 613



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 162/360 (45%), Gaps = 25/360 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N   ++ D    +   P ++Q LP+ I+ I AG   +  LD TG +  +G    
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT-IKAIAAGNAHSLALDGTGRVWAWGSNSN 227

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG      + LP  VP       LS       H L   ++G  + WG   +G+LG G 
Sbjct: 228 GQLGDTTAGYRMLPALVPGLTNATGLS---AGSNHSLVRQADGTTWVWGANTYGQLGDGT 284

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T S+  P+ + G L G  V  V     HS  +  DG ++TWG    G+LG G  + R  P
Sbjct: 285 TTSRSAPQQVSG-LAG--VDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVP 341

Query: 366 TLVTELSDVGAVSCGES-HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
             V  LS V AV+ G   H++ +  +G  VW+ G    G+LG   +     PK   AL  
Sbjct: 342 VQVMGLSGVVAVAAGSGQHSVAVMANGE-VWTWGHNVEGQLGEGSSSYSAVPKRSHAL-- 398

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDVSI 479
                V AG    +A   DG V+ WG   +       T     P  V GL++  +V V+ 
Sbjct: 399 VERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPGLTN--MVAVAA 456

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G    LAL     V+AWG N  GQ G  + ++  + P++V GL  V    I AG   ++A
Sbjct: 457 GHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSN-PTQVPGLTGVV--SIAAGPGHALA 513



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 19/291 (6%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
            V+ WG N + Q+ D        P   S  +++  + AG+    ++   G +  +G   KG
Sbjct: 769  VWAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKG 828

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG   TT + +P +VP    +V+++      AH L + ++G V+ WG   +G+LG G T
Sbjct: 829  QLGDGTTTRRLVPTQVPGLTGVVAVA---AGYAHSLALKADGTVWGWGENIYGQLGDGTT 885

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
              +  P    G      V  +++G  H  A   DG L+ WG   HG+LG G   +R  PT
Sbjct: 886  TQRVAPTQAQGLTV---VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPT 942

Query: 367  LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV-IEALRKF 425
            LV  LS V ++S    H+L L  DG TVW+ G  + G+LG    G  TT  V  +A    
Sbjct: 943  LVPSLSGVVSLSATHQHSLALKPDG-TVWAWGYNSNGQLGD---GTTTTRHVPTQAPSLS 998

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSS 471
             V+ V AG  +S+A+  DG V+ WG+  R      ++    TP  V GL+S
Sbjct: 999  SVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVAGLNS 1049



 Score =  104 bits (260), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 15/222 (6%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
           R+  V+AG  H+ AV  DG ++ WG+  +G+LG+G L+ +  P     L ++ AV  G+ 
Sbjct: 49  RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVGAGDL 108

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+L +  DG TVW+ G  N G+LG   T     P  +  L +  V +V AG S S+AL  
Sbjct: 109 HSLAMKSDG-TVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGE--VVRVAAGFSHSLALKT 165

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           DG V+ WG      LG  +++     PV V GL +  I  ++ G++H LAL     V+AW
Sbjct: 166 DGTVWAWGSNGAGRLGDGTTTQRL-MPVQVQGLPT--IKAIAAGNAHSLALDGTGRVWAW 222

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
           GSN+ GQ G D  +     P+ V GL +     + AGS  S+
Sbjct: 223 GSNSNGQLG-DTTAGYRMLPALVPGLTNAT--GLSAGSNHSL 261



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
            A   ++ WG N H Q+          P L    S +  + A    +  L   G +  +G 
Sbjct: 915  ADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVSLSATHQHSLALKPDGTVWAWGY 974

Query: 245  --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA---HVLTVTSEGEVYSWGVGEHG 299
               G LG   TT + +P + P      SLS  K   A   + L V ++G V+SWG+ + G
Sbjct: 975  NSNGQLGDGTTTTRHVPTQAP------SLSSVKAVSAGFEYSLAVKADGTVWSWGINDRG 1028

Query: 300  KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            +LG G    +  P  + G L    VT + A  +H+  V+ DG +  +G+ + G+LG GD 
Sbjct: 1029 QLGSGTATPRATPTQVAG-L--NSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDT 1085

Query: 360  KSRHTPTLV 368
              R  P  V
Sbjct: 1086 LIRLAPNQV 1094


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 20/309 (6%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G G LG+  +       R         L    C   H L +  +G VY+ G    G+LGH
Sbjct: 9   GAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH 68

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL-KSR 362
               S  RP+L+ G L  ++++ VS G +HS AV E G ++ WG GD G+LG G   ++ 
Sbjct: 69  DKGGS--RPELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAV 125

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHT-VWSMG-SGNLGKLGHEDTGKVTTPKV 418
             P L+ +L +  +  V CG  H + LS+DG   VW    SG LG LG  +   + +P+ 
Sbjct: 126 RVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLG-LGKGEPSTL-SPQP 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           +++L    + ++ AG   S AL++ G VF WG      LGL         P  +  L S 
Sbjct: 184 LKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQ-DRAVPCHIKFLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVVGLEDVCVRQIC 531
           ++V +S G+ H  AL++   ++ +G+ + GQ G D+  N P+  P +V+ L    V QI 
Sbjct: 243 KVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIA 300

Query: 532 AGSLFSIAY 540
            G   ++A+
Sbjct: 301 CGRNHTLAF 309



 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 11/266 (4%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +S   C +AH L V  +G+V++WG G+ G+LG G      R   ++  L   R++QV  G
Sbjct: 86  ISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCG 145

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDV--GAVSCGESHTLVL 387
           + H  A+++DG L+ WGE   G+LG G  + S  +P  +  L  +    +S G  H+  L
Sbjct: 146 NHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL 205

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           S  G  V+  G  + G+LG  D      P  I+ LR  +V  +  G   + ALT +G +F
Sbjct: 206 SFSG-AVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLF 264

Query: 448 WWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTM 501
            +G G +      S+ +   P  V  L   ++  ++ G +H LA       +YA+G NT 
Sbjct: 265 TFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCV 527
           GQ G          P  V  ++ +C+
Sbjct: 325 GQLGT-GIRGSAKSPVPVSNIQPLCI 349



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 113/225 (50%), Gaps = 12/225 (5%)

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG    G+LG G + +            G+ + +V+ G+ HS  +  DG +YT G    G
Sbjct: 5   WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64

Query: 353 RLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           +LGH    SR  P LV  L    +  VSCG++H+L +++ G  V++ G+G+ G+LG    
Sbjct: 65  QLGHDKGGSR--PELVGALDAQKISGVSCGQAHSLAVNEQGQ-VFAWGAGDGGQLGLGTA 121

Query: 411 GK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTP 463
            + V  P++I+ L + R+ +V  G    +AL+ DG +F WG      LGL     S  +P
Sbjct: 122 EEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSP 181

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             +  L    +  +S G  H  ALS    V+ WG N+ GQ G ++
Sbjct: 182 QPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND 226



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 12/207 (5%)

Query: 342 LLYTWGEGDHGRLGHGDLKS---RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++  WG    G+LG G  ++         V +   +  V+CG  H+L L  DG +V++ G
Sbjct: 1   MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDG-SVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           S + G+LGH+  G  + P+++ AL   ++  V  G + S+A+   G VF WG      LG
Sbjct: 60  SNSCGQLGHDKGG--SRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L ++  +   P L+  L  H+I  V  G+ H +ALS+  +++ WG N+ GQ G       
Sbjct: 118 LGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPS 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
              P  +  L  + + QI AG   S A
Sbjct: 178 TLSPQPLKSLCGIPLTQISAGGDHSFA 204



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 179 GDTDISVAHS-KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLD 235
           GD   +++ S  V+ WG N   Q+ L++ + +     ++ L S  + +I  G+  T  L 
Sbjct: 199 GDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALT 258

Query: 236 STGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVY 291
             GGL  +G   KG LG  +T  +PLP+RV +E     +S   C   H L  V S G +Y
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNEPLPRRV-MELMGTEVSQIACGRNHTLAFVPSTGLIY 317

Query: 292 SWGVGEHGKLGHGNTLSQRRP 312
           ++G    G+LG G   S + P
Sbjct: 318 AFGCNTQGQLGTGIRGSAKSP 338


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 175/399 (43%), Gaps = 26/399 (6%)

Query: 138 LVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNL 197
            V+L+ +     NI P+   K++N N        P +         +V    ++ WG  +
Sbjct: 33  FVFLLTLPFKCSNIIPI---KNANRNKKRRLACEPIIAVEYS----TVTDKNMFCWGSTI 85

Query: 198 HHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LAN 252
           H ++    +++      R       + I  I  G+  T L+   G +   G    G L +
Sbjct: 86  HGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGH 145

Query: 253 TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-HGNTLSQRR 311
              +   + +P   A V   V+ C   H L V   G+++SWG    G+LG +   L +  
Sbjct: 146 EKGRKRLQLIPGLDAFVFKKVA-CGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECV 204

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTE 370
           P ++   L    V QV+ G +H  A+T +G LY+WG    G+LG G D+K+   P L++ 
Sbjct: 205 PHMVRA-LGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISS 263

Query: 371 LSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           L+ V    ++CG  H++ +S+ G  V+  G    G+LG  DT     P+ ++ L+  +V 
Sbjct: 264 LAGVPIAFITCGGYHSMAISKSG-AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVC 322

Query: 429 KVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSHQIVDVSIGDSH 483
               G  FSV LT DG VF  G G+       +T     P  V  L    +  +S G  H
Sbjct: 323 YAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRH 382

Query: 484 VLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            L L      VYAWG    GQ G +N +  V  P  V G
Sbjct: 383 TLGLVPSRGRVYAWGLGGAGQLG-NNITRSVATPQVVHG 420



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 13/210 (6%)

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRH--TPTLV--TELSDVGAVSCGESHTLVLSQDGHTVW 395
           D  ++ WG   HG LG G ++  +   P  +   + +++  ++CGE++T+++++DG  V+
Sbjct: 75  DKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQ-VY 133

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
           S G+ + G+LGHE   K    ++I  L  F  +KV  G   ++A+   G +F WG     
Sbjct: 134 SCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEG 191

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL S ++    P +V  L +  +V V+ G +HVLAL+   ++Y+WGSN+ GQ G    
Sbjct: 192 QLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTD 251

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                +P  +  L  V +  I  G   S+A
Sbjct: 252 VKNEIKPKLISSLAGVPIAFITCGGYHSMA 281


>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 818

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 171/351 (48%), Gaps = 23/351 (6%)

Query: 163 NTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR 222
           N D++ T+ P L      T    A   ++ WG N + ++          P      S+  
Sbjct: 117 NVDVECTAFPVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGTDSDWT 176

Query: 223 HIEAGQFCTFLLDSTGGLLVYGK-GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV 281
            + AG+  T  + + G L  +G+ G +GL ++  +  P++V ++   ++LS      +H 
Sbjct: 177 AVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDWIALSAGG---SHT 233

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + V ++G +++WG    G+LG G+T     P  +  G       ++SAG  HS AV  DG
Sbjct: 234 VAVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQV--GTDTDWAKKISAGRRHSLAVKADG 291

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            L+ WG+ ++G+LG GD   RH P  V   +D  A+S G  H+L +  DG ++WS G  +
Sbjct: 292 SLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHSLAVKADG-SLWSWGYND 350

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
            G+LG  DT     P+ + A   + +  V AG   S+A+  DG +  WG      LGL  
Sbjct: 351 SGQLGLGDTADRNAPEQVGADTDWDL--VSAGGEHSLAVKADGTLMVWGLNHLGQLGL-G 407

Query: 456 SSISFHTPV-LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            ++S   PV + +G++      +  G +H +A++    + AWG N  GQ G
Sbjct: 408 DTVSRDAPVPIASGIA------LVAGRNHTVAVNPDGTLRAWGDNEYGQLG 452



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 165/346 (47%), Gaps = 26/346 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           A   ++ WG N + Q+      +   P      ++   I AG+  +  + + G L  +G 
Sbjct: 289 ADGSLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHSLAVKADGSLWSWGY 348

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LGL +T  +  P++V    A     +      H L V ++G +  WG+   G+LG
Sbjct: 349 NDSGQLGLGDTADRNAPEQV---GADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLG 405

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G+T+S+  P  I  G+       + AG +H+ AV  DG L  WG+ ++G+LG G ++  
Sbjct: 406 LGDTVSRDAPVPIASGI------ALVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYI 459

Query: 363 HTPTLVTELSDVGAVSCGE-SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            TP+     S   AV+ G  +H+L L  DG T+W+ G  N G+LG  DT    TP+ + +
Sbjct: 460 VTPSQTVTGSAWAAVNGGSFNHSLGLRDDG-TLWAWGRNNYGQLGLGDTDDRATPEQVGS 518

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
              +    V A +  ++A+  DG ++ WG      LGL S +   HTP  V   S     
Sbjct: 519 HTDWAA--VNAASYHTLAVKNDGTLWAWGRNSSGQLGL-SDTNDRHTPERVG--SDTDWA 573

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            VS+G SH  A+     ++AWG N  GQ G  + S+ +  P +V G
Sbjct: 574 TVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRL-SPEQVGG 618



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 156/343 (45%), Gaps = 25/343 (7%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           ++ WG N + Q+ L +   + + P      ++   + A  + T  + + G L  +G+   
Sbjct: 491 LWAWGRNNYGQLGLGDTDDRAT-PEQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSS 549

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LGL++T  +  P+RV  +    ++SV    ++H   V  +G +++WG   +G+LG G+
Sbjct: 550 GQLGLSDTNDRHTPERVGSDTDWATVSVG---QSHTSAVKPDGTLWAWGWNHYGQLGLGD 606

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T  +  P+ + G         VS G  H+ AV  DG L+ WG    G+LG G    RH P
Sbjct: 607 TSDRLSPEQVGGE---SNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAP 663

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V   +D  AVS     TL +  DG T+W+ G  N G+LG  DT    TP  +     +
Sbjct: 664 VQVGSDTDWAAVSASGYRTLAVKADG-TLWAWGENNNGQLGLGDTDNRNTPAQVGNDADW 722

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
               V  G   ++A   D  ++ WG      LGL  +  +   PV V   +    V  S 
Sbjct: 723 AA--VSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTD-NRDAPVQVGNETDWSTV--SG 777

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           G  H LA      + AWG NT GQ GQ       DQP +V G 
Sbjct: 778 GGYHTLATMSDGTLRAWGLNTSGQLGQRTMW--FDQPQEVPGW 818


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 143/279 (51%), Gaps = 21/279 (7%)

Query: 242 VYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N++    P P R      I  ++   C ++H L VT EG+V SWG
Sbjct: 88  VYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA---CGDSHCLAVTMEGQVQSWG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ I     G  +  V+AG  H+AAVTEDG LY WG G +G L
Sbjct: 145 RNQNGQLGLGTTEDSLVPQKIQA-FQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD K R  P  V+      +  V+CG  HT+ +S  G  +++ G    G+LGH D   
Sbjct: 204 GLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDYAD 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P  +EAL+   + ++  G   ++A+T DG ++ WG      +G+   ++   +PV V
Sbjct: 263 HLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV-GDNVDRSSPVQV 321

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                 +++ +S G  H LA+++   V++WG  T GQ G
Sbjct: 322 KLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLG 360



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--C 379
           +RV  +SAG SHS A+    ++ TWG G+ G+LGHGD + R +PT+++ L  +  +S  C
Sbjct: 14  RRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVIC 73

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  S+    V+S G G+ G+LGH ++  + TP+ I  L   +++++  G S  +A
Sbjct: 74  GADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLA 133

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL ++  S   P  +       I  V+ G  H  A+++  E+
Sbjct: 134 VTMEGQVQSWGRNQNGQLGLGTTEDSL-VPQKIQAFQGVPIKMVAAGAEHTAAVTEDGEL 192

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 193 YGWGWGRYGNLG 204



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 137/272 (50%), Gaps = 13/272 (4%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H + + S   V +WG GE G+LGHG+   +  P  I+  L G  +  V  G  H+ A +
Sbjct: 24  SHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPT-ILSTLEGLEIISVICGADHTIAYS 82

Query: 339 EDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
           E    +Y+WG GD GRLGHG+     TP  + +L    +  ++CG+SH L ++ +G  V 
Sbjct: 83  ESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQ-VQ 141

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
           S G    G+LG   T     P+ I+A +   ++ V AG   + A+T DG ++ WG G R 
Sbjct: 142 SWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWG-RY 200

Query: 456 SSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            ++          P  V+     ++V V+ G  H +++S    +Y +G +  GQ G  ++
Sbjct: 201 GNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDY 260

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++ +  P ++  L+   + QI  G   ++A T
Sbjct: 261 ADHL-IPHQLEALQGSFISQISGGWRHTMAVT 291



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 122/244 (50%), Gaps = 14/244 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+     I+ + AG   T  +   G L  YG 
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGEL--YGW 195

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P++V L      + V+ C   H ++V+S G +Y++G  ++G+
Sbjct: 196 GWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVA-CGWRHTISVSSSGGLYTYGWSKYGQ 254

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +   L G  ++Q+S G  H+ AVT DG LY WG    G++G GD  
Sbjct: 255 LGHGDYADHLIPHQLEA-LQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNV 313

Query: 361 SRHTPTLVTE--LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            R +P  V       V  +SCG  HTL +++    V+S G G  G+LG+ +      P +
Sbjct: 314 DRSSPVQVKLPLEQKVILISCGWRHTLAVTER-QNVFSWGRGTNGQLGNGECTDRNVPVI 372

Query: 419 IEAL 422
           I+AL
Sbjct: 373 IKAL 376



 Score = 73.9 bits (180), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 15/215 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHI--EAGQFCTFLLDSTGGLLVYG- 244
            ++Y WG   +  +    R     P   SLP   + +    G   T  + S+GGL  YG 
Sbjct: 190 GELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGW 249

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGK 300
              G LG  +     +P +  LEA   S  +S+ S    H + VTS+G++Y WG  + G+
Sbjct: 250 SKYGQLGHGDYADHLIPHQ--LEALQGSF-ISQISGGWRHTMAVTSDGKLYGWGWNKFGQ 306

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +G G+ + +  P  +   L  ++V  +S G  H+ AVTE   +++WG G +G+LG+G+  
Sbjct: 307 VGVGDNVDRSSPVQVKLPLE-QKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECT 365

Query: 361 SRHTPTLVTELSDVGAVSCGE--SHTLVLSQDGHT 393
            R+ P ++  LS  G  SCG+    ++V S  G T
Sbjct: 366 DRNVPVIIKALSVDG--SCGQHIESSMVDSSSGKT 398


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 31/306 (10%)

Query: 242 VYGKGWLGLA------------NTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           V  +G LG+A            N  + P  P  V  +A+I+ + VS C  +  L ++ EG
Sbjct: 213 VVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVS-CGNSFTLALSQEG 271

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIM----GGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
            VYSWG+G  G LG G       P +I     G L+ + +  ++ G +H  ++   G++Y
Sbjct: 272 HVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLF-QNIKDIACGSNHVLSLDHQGIVY 330

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLS-QDGHTVWSMGSGN 401
           +WG G  GRLGHGD    + P  +  L    +  +  GE  +  +S ++   +W  G G 
Sbjct: 331 SWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFIW--GVGL 388

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
            G+LG   T  V  P ++E L+  +V  +  G++ S+ +  +G    WG      LGL +
Sbjct: 389 HGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLET 448

Query: 456 S-SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           +   +F  P  +  L   ++  ++ G  H +AL++  E+Y++G++  G+ G D     V 
Sbjct: 449 ALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQ 508

Query: 515 QPSKVV 520
            P K+ 
Sbjct: 509 IPRKIT 514



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 27/279 (9%)

Query: 288 GEVYSWGVGEHGKLG-------------HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           G V++WGV   G+LG               N L   +P ++        + +VS G+S +
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDA-SIIIIKVSCGNSFT 264

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE------LSDVGAVSCGESHTLVLS 388
            A++++G +Y+WG G+ G LG G+     TP ++          ++  ++CG +H L L 
Sbjct: 265 LALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLD 324

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
             G  V+S G+G  G+LGH D      PK I  LR++++  + AG   S A++    +F 
Sbjct: 325 HQG-IVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFI 383

Query: 449 WGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           WG+GL        + +   PV++  L   ++ D+++G +H L + +  +   WGS+  G+
Sbjct: 384 WGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGK 443

Query: 504 CG-QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G +        QP ++V L+   + QI AG   SIA T
Sbjct: 444 LGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALT 482



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 29/287 (10%)

Query: 190 VYTWGC--------NLHHQILDEVRGKCS-----RPRLQSLPSNIRHIEA--GQFCTFLL 234
           V+TWG          L+ + ++ +  K +     +P +    ++I  I+   G   T  L
Sbjct: 208 VFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLAL 267

Query: 235 DSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAA---IVSLSVSKCSEAHVLTVTSEG 288
              G +  +G    G LG     +   P  +  +       ++    C   HVL++  +G
Sbjct: 268 SQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQG 327

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            VYSWG G+ G+LGHG+   +  PK I+ GL   ++  + AG   SAA++    L+ WG 
Sbjct: 328 IVYSWGNGQGGRLGHGDETGENIPKEII-GLRQYKILMIEAGEGSSAAISIKNELFIWGV 386

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGSGNLGKL 405
           G HGRLG G   +   P ++ +L D  V  ++ G +H+L + ++G  + W  GS   GKL
Sbjct: 387 GLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCW--GSSKDGKL 444

Query: 406 GHEDT--GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G E       T PK +  L K ++ ++ AG   S+ALT +G ++ +G
Sbjct: 445 GLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFG 491



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 146/337 (43%), Gaps = 64/337 (18%)

Query: 221  IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANT-TIQPLPKRVP-LEAAIVSLSVSK 275
            I+H+  G F    +   G    +G+   G LG+    T+   P R+  L+  ++ ++ S 
Sbjct: 677  IKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTAS- 735

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLS-----------------QRR------ 311
              E+H L ++  GEV   G  E G+LG G N+ S                 QR+      
Sbjct: 736  -GESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKI 794

Query: 312  ---PKLIMGGLYGKRVTQVSAGHSHSAAV-----TEDGL-LYTWGEGDHGRLGHGDLKSR 362
               PK+I G    + +  ++AG +HS A+      E  + L+TWG G HG+ GHG  ++ 
Sbjct: 795  ELTPKIIKGL---ESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND 851

Query: 363  HTPTLVTE--LSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHED--------T 410
            + P +V    L D   +  SCG  HT+ L   GH +W  G      +G ED         
Sbjct: 852  YLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGH-IWFFGYK--PSVGIEDFNDEKQFMP 908

Query: 411  GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL- 469
             ++ TP  I+   KF    + +G   ++A+T  GLV+ +G    +   S H   L     
Sbjct: 909  ARLETPSKIQEPFKF----ISSGEEHNLAVTQSGLVYGFGKNTNTKINSSHKEYLYFDQV 964

Query: 470  -SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             +  + V  + G +H + +      Y WG    G+CG
Sbjct: 965  ENEEKAVLTACGANHSVLIDTKGVPYTWGFVGNGRCG 1001



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 41/286 (14%)

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           +P P  +  +A  + +        HVL VT EG  + WG  ++G+LG G   +       
Sbjct: 662 KPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTR 721

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG------------------ 357
           +  L  K +   ++G SHS  +++ G +   G  + G LG G                  
Sbjct: 722 IKSLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIY 781

Query: 358 ---------DLKSRHTPTLVTELSDVGAVSCGESHTLVL-----SQDGHTVWSMGSGNLG 403
                    + K   TP ++  L  +G ++ G++H++ +      +    +++ G G  G
Sbjct: 782 DENYQRQLIETKIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHG 841

Query: 404 KLGHEDTGKVTTPKVIE--ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH 461
           + GH        P++++   L+  +  +   G+  ++AL   G ++++G         F+
Sbjct: 842 QTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFN 901

Query: 462 -----TPVLVTGLSSHQ--IVDVSIGDSHVLALSQYNEVYAWGSNT 500
                 P  +   S  Q     +S G+ H LA++Q   VY +G NT
Sbjct: 902 DEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNT 947



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 138/387 (35%), Gaps = 73/387 (18%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++++ WG  LH ++         +P  L+ L    +  I  G   +  +   G  + +G 
Sbjct: 379 NELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGS 438

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-----HVLTVTSEGEVYSWGVGE 297
              G LGL       L +       +V+L   K  +      H + +T  GE+YS+G  +
Sbjct: 439 SKDGKLGLETA----LDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSK 494

Query: 298 HGKLGH----GNT-----------------LSQRRPKLIMGGLY--------------GK 322
            GKLG+    GN                  L+ RR K  +   +              G 
Sbjct: 495 DGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGC 554

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH----GDLKSRHTPTLVTELSD--VGA 376
            V Q   G + +  +  DG +Y  G   +G+LG     G         L+   +D   G 
Sbjct: 555 EVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLGFSKRAGGKDKDGNKMLINSNNDGNQGG 614

Query: 377 VSCGESHTL----------VLSQDGHTVWS-MGSGNLGKLGH-EDTGKVTTPKVIEALRK 424
           +S    +             L Q+   V        L +L   +D  K +   +     +
Sbjct: 615 MSGANDNDNDDDDNGIGGGFLQQNSDDVLPPQLKKKLAELQQLQDVEKPSPLTIYHDAVQ 674

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
            +++ V  G    +A+T +G  F WG      LG+         P  +  L    I+  +
Sbjct: 675 MKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTA 734

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G+SH L LS   EV   G N  G+ G
Sbjct: 735 SGESHSLFLSDLGEVLCSGFNEFGELG 761



 Score = 53.9 bits (128), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 14/176 (7%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEA--GQFCTFLLDSTGGLLVYG 244
            K++TWGC  H Q           P++  +P   + + I+A  G   T  LD+TG +  +G
Sbjct: 831  KLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG 890

Query: 245  -KGWLGLA--NTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
             K  +G+   N   Q +P R+   + I          E H L VT  G VY +G   + K
Sbjct: 891  YKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTK 950

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSA-GHSHSAAVTEDGLLYTWGEGDHGRLG 355
            +      S  +  L    +  +    ++A G +HS  +   G+ YTWG   +GR G
Sbjct: 951  IN-----SSHKEYLYFDQVENEEKAVLTACGANHSVLIDTKGVPYTWGFVGNGRCG 1001



 Score = 41.2 bits (95), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 240  LLVYGKGWLGLA-----NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            L  +G GW G            P   +VP+      +  S C   H + + + G ++ +G
Sbjct: 832  LFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQAS-CGSKHTIALDTTGHIWFFG 890

Query: 295  VGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
                  +   N   Q  P +L       +    +S+G  H+ AVT+ GL+Y +G+  + +
Sbjct: 891  YKPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTK 950

Query: 354  LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG--HTVWSMGSGNLG-KLGHEDT 410
            +     +  +   +  E   V   +CG +H++++   G  +T   +G+G  G KL  +D 
Sbjct: 951  INSSHKEYLYFDQVENEEKAV-LTACGANHSVLIDTKGVPYTWGFVGNGRCGLKLEKDDA 1009

Query: 411  GK----VTTPKVIEALR 423
             +    ++ P VI  ++
Sbjct: 1010 QQEQESLSAPTVIYFMK 1026


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 135/282 (47%), Gaps = 21/282 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G +  G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 430

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD KS   P  V  L     V  +CG  HT  + +  
Sbjct: 431 TAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIM 490

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL      +V  G S +VAL
Sbjct: 491 VGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVAL 550

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G L+   + +++ G  HV  L+   EVY 
Sbjct: 551 TTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYT 610

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           WG    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+
Sbjct: 611 WGKGANGRLGHGD-TDDRNSPTLVEALKDKQVKSIACGTNFT 651



 Score =  127 bits (320), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 159/323 (49%), Gaps = 34/323 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             ++++WG     ++   V      P+L  SL  +NI  +  G++ T  +  +G L  +G
Sbjct: 330 QGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWG 389

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 390 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS-SIS-CGPWHTAVVTSSGQLFTFGDGT 447

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+T S  +P+ +   L G R    + G  H+AAV E             G L+T
Sbjct: 448 FGVLGHGDTKSVSKPREVE-SLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFT 506

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD +++  PT V  L D     V+CG S T+ L+  GH V++MGS   G
Sbjct: 507 WGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGH-VYTMGSPVYG 565

Query: 404 KLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSS 457
           +LG+ +  GK+ T +V   L K  V ++  G      LT    V+ WG G         +
Sbjct: 566 QLGNPQADGKLPT-RVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 624

Query: 458 ISFHTPVLVTGLSSHQIVDVSIG 480
              ++P LV  L   Q+  ++ G
Sbjct: 625 DDRNSPTLVEALKDKQVKSIACG 647



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 137/302 (45%), Gaps = 32/302 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           LPK   LE+A+V L V    C   H   VT +GE++SWG    G+LGHG       PKLI
Sbjct: 302 LPK--ALESAVV-LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLI 358

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---E 370
              L    +  V+ G  H+ AVT  G LYTWG+G +  G LGHG+  S   P  V    E
Sbjct: 359 -DSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 417

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V ++SCG  HT V++  G  +++ G G  G LGH DT  V+ P+ +E+L+  R    
Sbjct: 418 GIHVSSISCGPWHTAVVTSSGQ-LFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVIS 476

Query: 431 CAGTSFSVALTW------------DGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         +   P  V  L    
Sbjct: 477 ACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPN 536

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +AL+    VY  GS   GQ G       +  P++V G L    V +I  
Sbjct: 537 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL--PTRVEGKLAKSFVEEIAC 594

Query: 533 GS 534
           G+
Sbjct: 595 GA 596


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 37/318 (11%)

Query: 247 WLGLANTTIQP--LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           +L     T+ P  LP ++ +    V L        H++ V  E  VY+WG G  G+LGHG
Sbjct: 624 YLDTCAMTLTPIELPAKIKIRQVAVGLE-------HMVVVAMERAVYTWGEGSKGQLGHG 676

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           + L + +P+++   L GK + +   G   S  V+++G++ T G+G +G LGHGD  S   
Sbjct: 677 DLLGRSKPEMVEA-LKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASR 735

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P L+  L   DV A+SCG  H + +  DG  V++ G G  G LG  D     +P+ ++  
Sbjct: 736 PRLIEPLLSVDVRAISCGPHHVVAVGSDGE-VFAWGRGKHGCLGLGDEEDHFSPQEVQIS 794

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL---------------RSSSISFH 461
               +R+V  G   ++ LT  G V   G      LGL               +       
Sbjct: 795 EPVFIREVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRK 854

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV-- 519
            P +V  L++H+ +D+++G  H   L +  +VY +G N  GQ G    + P D P +V  
Sbjct: 855 VPTVVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGT-GHTKPRDAPMEVKD 913

Query: 520 VGLEDVCVRQICAGSLFS 537
           + + D  V  +  G +F+
Sbjct: 914 LSISDKTVTMLACGDMFT 931


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/234 (38%), Positives = 131/234 (55%), Gaps = 17/234 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSK-- 275
           I H+  G + T  + S G L  +G G    LG  N +    P+RV    A+V LS+    
Sbjct: 35  ITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVE---ALVGLSIVDIA 91

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C   H   VTS+G +Y+WG  E+G  GHG+T   Q  PKL+   L GK+V Q+SA   H+
Sbjct: 92  CGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLER-LNGKKVVQLSACGFHT 150

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA----VSCGESHTLVLSQD 390
           A +T+D   + WGEG  GRLG+G  ++ H+P L+  L  +G     V+CG  H+ V+++D
Sbjct: 151 ACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESL--IGKYPCQVACGGFHSAVITRD 208

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           G  +++ G G  G+LGH D      P ++EAL    V+++  G S SVALT +G
Sbjct: 209 G-KMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEG 261



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 130/260 (50%), Gaps = 10/260 (3%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V+SWG GE G+LG G+T  Q  P  +        +T V+ G  H+AAV  +G LYTWG G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
            +G+LGHG+     TP  V  L  +  V  +CG  HT V++  G  +++ G    G  GH
Sbjct: 61  MYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKG-CLYTWGDKENGVAGH 119

Query: 408 EDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFH 461
            DT G   TPK++E L   +V ++ A    +  LT D   F WG G        +  + H
Sbjct: 120 GDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCH 179

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           +P L+  L       V+ G  H   +++  ++Y +G    GQ G  +  N + +P+ V  
Sbjct: 180 SPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL-KPTLVEA 238

Query: 522 LEDVCVRQICAGSLFSIAYT 541
           L+ V V+QI  G   S+A T
Sbjct: 239 LDGVVVKQITCGWSHSVALT 258



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 131/259 (50%), Gaps = 14/259 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG+ +T+ Q  P  V     +  ++   C   H   V S G++Y+WG G +GKLGHGN
Sbjct: 10  GQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGN 69

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS-RHT 364
                 P+ +   L G  +  ++ G  H+A VT  G LYTWG+ ++G  GHGD +  ++T
Sbjct: 70  ESGHSTPRRVE-ALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYT 128

Query: 365 PTLVTELSDVGAV---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           P L+  L+    V   +CG  HT  L+ D H  ++ G G  G+LG+       +P++IE+
Sbjct: 129 PKLLERLNGKKVVQLSACG-FHTACLTDD-HETFAWGEGKFGRLGNGTERNCHSPRLIES 186

Query: 422 L-RKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIV 475
           L  K+  +  C G   S  +T DG ++ +G G       +  ++   P LV  L    + 
Sbjct: 187 LIGKYPCQVACGGF-HSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVK 245

Query: 476 DVSIGDSHVLALSQYNEVY 494
            ++ G SH +AL+   E +
Sbjct: 246 QITCGWSHSVALTSEGEYH 264


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 23/290 (7%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  
Sbjct: 36  SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIH 89

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LGH   + S   P L+ +L+   +  VSCG  H
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWH 149

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            + L+ DG   ++ G    G+LG  ++     +P+ +++L    + +V AG + S AL+ 
Sbjct: 150 CMALAADGQ-FFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSL 208

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 209 SGAVFGWGRNNAGQLGL-SDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 268 GAGSFGQLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSSG 315



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 152/335 (45%), Gaps = 19/335 (5%)

Query: 201 ILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           I   ++G  + P+     S+  I+ +  G   +  L   G +   G   KG LG      
Sbjct: 15  ISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN 74

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           +P       +  I+ ++   C E+H L ++ +G+++SWG G  G+LGH  T        +
Sbjct: 75  KPEQIGALADQHIIHVA---CGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRL 131

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV 374
           +  L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +
Sbjct: 132 IKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGI 191

Query: 375 --GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
               V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  +  
Sbjct: 192 PLAQVAAGGAHSFALSLSG-AVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISC 250

Query: 433 GTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL 487
           G   +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA 
Sbjct: 251 GEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 310

Query: 488 -SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
                 +YA+G    GQ G  +  N V  PS V G
Sbjct: 311 VPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPVKG 344



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 20/227 (8%)

Query: 293 WGVGEHGKLGHGNTLSQRRPKLI-----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +  LGH   +S     ++      G +  + + +V+ G +HS  + EDG +YT G
Sbjct: 4   WG---YWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
               G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G  ++S G+G+ G+L
Sbjct: 61  LNTKGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDQGQ-LFSWGAGSDGQL 117

Query: 406 GHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           GH  T   V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     
Sbjct: 118 GHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFP 177

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           S  +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 178 SQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLG 224



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 20/211 (9%)

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTE------LSD--VGAVSCGESHTLVLSQDGHTVWSM 397
           WG   +  LGH    S +   +VTE      +SD  +  V+CG +H++ L +DG  V++ 
Sbjct: 4   WG---YWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGE-VYTC 59

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G    G+LGHE  G    P+ I AL    +  V  G S S+AL+  G +F WG      L
Sbjct: 60  GLNTKGQLGHEREG--NKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQL 117

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  ++  S   P L+  L+   I+ VS G+ H +AL+   + + WG N  GQ G      
Sbjct: 118 GHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFP 177

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               P +V  LE + + Q+ AG   S A ++
Sbjct: 178 SQASPQRVKSLEGIPLAQVAAGGAHSFALSL 208



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 185 VAHSKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLL 241
            A  + +TWG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G + 
Sbjct: 154 AADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVF 213

Query: 242 VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G+   G LGL++ T +  P  V L      + +S C E H   +T  G V+++G G  
Sbjct: 214 GWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSF 272

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHG 357
           G+LGH +   +  P+ ++  L G  VTQ++ G  H+ A V   GL+Y +G G  G+LG G
Sbjct: 273 GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 331

Query: 358 DLKSRHTPTLV 368
              +   P+ V
Sbjct: 332 HTCNVKCPSPV 342



 Score = 45.4 bits (106), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 11/136 (8%)

Query: 190 VYTWGCNLHHQI--LDEV--RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           V+ WG N   Q+   DE   +  C    L++    + +I  G+  T +L  +GG+  +G 
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRT--QKVVYISCGEEHTAVLTKSGGVFTFGA 269

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKL 301
              G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+L
Sbjct: 270 GSFGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 328

Query: 302 GHGNTLSQRRPKLIMG 317
           G G+T + + P  + G
Sbjct: 329 GTGHTCNVKCPSPVKG 344


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 178/394 (45%), Gaps = 39/394 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS-- 274
           ++++I  G     L+   G +  +G+   G LG    +    PK   L  A+ +L++   
Sbjct: 309 DVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK---LIDALSNLNIELV 365

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            C E H   VT  G++Y+WG G +  G LGHG  +S   PK + G L G  ++ +S G  
Sbjct: 366 ACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPW 425

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ- 389
           H+A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + + 
Sbjct: 426 HTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEV 485

Query: 390 ----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
                         +++ G G+ G+LGH D      P  + AL +    +V  G S +VA
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 440 LTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVY 494
           LT  G ++  G      L +       P  V G LS   + +++ G  HV  L+   EVY
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVY 605

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
            WG    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S    
Sbjct: 606 TWGKGANGRLGHGS-TDDRNTPTLVEALKDKQVKSIACGTNFTAAICL---HKWVSGVDQ 661

Query: 555 PLCVDVRPHTFTLIREFLEQYSACFETGDYIPFC 588
            +C   R     L   F  +   C+  G  + FC
Sbjct: 662 SMCSGCR-----LPFNFKRKRHNCYNCG--LVFC 688



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 141/328 (42%), Gaps = 77/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++          P+L    SN  I  +  G++ T  +  +G L  +G
Sbjct: 326 QGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWG 385

Query: 245 -----KGWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG        +PKRV  PL+   +S S+S C   H   VTS G+++++G G 
Sbjct: 386 DGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHIS-SIS-CGPWHTALVTSAGKLFTFGDGT 443

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 444 FGVLGHGDRDSISIPREVES-LKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFT 502

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGH----------- 392
           WG+GD GRLGHGD ++R  PT V  L   +   V+CG S T+ L+  GH           
Sbjct: 503 WGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQ 562

Query: 393 ----------------------------------------TVWSMGSGNLGKLGHEDTGK 412
                                                    V++ G G  G+LGH  T  
Sbjct: 563 LGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDD 622

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             TP ++EAL+  +V+ +  GT+F+ A+
Sbjct: 623 RNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 44.3 bits (103), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E++    V+ +  G   +  +T  G VF WG      LG    S + H P L+  L
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHH-PKLIDAL 357

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           S+  I  V+ G+ H  A++   ++Y WG  T
Sbjct: 358 SNLNIELVACGEYHTCAVTLSGDLYTWGDGT 388


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 23/322 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A+ ++    C E H   V++ G++++WG G H  G LGHG  +S   PK + G L G +V
Sbjct: 314 AVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQV 373

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGES 382
             V+ G  HSA  T +G L+T+G+G  G LGHGD +S   P  V  LS +    V+CG  
Sbjct: 374 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVW 433

Query: 383 HTL----VLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           HT     V+SQ G  +     ++ G G+  +LGH        P  + AL  +   ++  G
Sbjct: 434 HTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACG 493

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            + +VALT  G VF  G    G   + +S    P LV   L    + ++S G  HV  L+
Sbjct: 494 HTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLT 553

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             +EV+ WG    G+ G  + +     P+ V  L+D  V+ I  GS F+ +  +   +  
Sbjct: 554 SRSEVFTWGRGANGRLGHGD-TEDRRSPTFVEALKDRNVKSISCGSNFTASICI---HKW 609

Query: 549 LSSAFTPLCVDVRPHTFTLIRE 570
           +S A   +C   R   F   R+
Sbjct: 610 VSGADQSVCSGCR-QAFGFTRK 630



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 30/346 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG     ++   +    SRP L      +N+  +  G++ T  + ++G L  +G
Sbjct: 282 QGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWG 341

Query: 245 K-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG        +PKRV  PLE   V LSV+ C   H    TS G+++++G G 
Sbjct: 342 DGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQV-LSVA-CGTWHSALATSNGKLFTFGDGT 399

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYTWG 347
            G LGHG+  S   P+ +   L G +  +V+ G  H+AA+ E             L+TWG
Sbjct: 400 FGVLGHGDRESVPYPREVQ-ILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWG 458

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           +GD  RLGHG  ++   PT V+ L D     ++CG + T+ L+  GH V++MG    G+L
Sbjct: 459 DGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGH-VFTMGGTAYGQL 517

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISF 460
           G+  +       V + L    V ++  G      LT    VF WG G         +   
Sbjct: 518 GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDR 577

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            +P  V  L    +  +S G +   ++  +  V     +    C Q
Sbjct: 578 RSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGADQSVCSGCRQ 623



 Score =  104 bits (259), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 22/250 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   HV  VT +GEV++WG    G+LGHG      RP L+   L    V  V+ G  H+ 
Sbjct: 271 CGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVE-FLAVNNVDFVACGEYHTC 329

Query: 336 AVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---ELSDVGAVSCGESHTLVLSQD 390
           AV+  G L+TWG+G H  G LGHG   S   P  V+   E   V +V+CG  H+ + + +
Sbjct: 330 AVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSN 389

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA----LTWDGL- 445
           G  +++ G G  G LGH D   V  P+ ++ L   +  KV  G   + A    ++  G  
Sbjct: 390 GK-LFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTN 448

Query: 446 -----VFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
                +F WG G +      S  ++  P  V+ L  +    ++ G +  +AL+    V+ 
Sbjct: 449 ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFT 508

Query: 496 WGSNTMGQCG 505
            G    GQ G
Sbjct: 509 MGGTAYGQLG 518



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 99/236 (41%), Gaps = 20/236 (8%)

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESH 383
           +++ G  H A VT  G ++TWGE   GRLGHG       P LV  L+  +V  V+CGE H
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYH 327

Query: 384 TLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALT 441
           T  +S  G    W  G+ N G LGH        PK +   L   +V  V  GT  S   T
Sbjct: 328 TCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALAT 387

Query: 442 WDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY------ 490
            +G +F +G G           S   P  V  LS  + + V+ G  H  A+ +       
Sbjct: 388 SNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGT 447

Query: 491 ----NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                +++ WG     + G  +    +  P+ V  L D    Q+  G   ++A T 
Sbjct: 448 NISSRKLFTWGDGDKHRLGHGSKETYL-LPTCVSALIDYNFHQLACGHTMTVALTT 502


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 138/286 (48%), Gaps = 25/286 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G +  G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 374 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 433

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A V+  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +  
Sbjct: 434 TAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVM 493

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +    +V  G S ++A 
Sbjct: 494 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIAR 553

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEV 493
           T  G V+  G      LG   S      P  V G LS   + +++ G  HV  L+   EV
Sbjct: 554 TTSGHVYTMGSPVYGQLGNPQSDGKL--PARVEGKLSRSSVEEIACGAYHVAVLTSKTEV 611

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           Y WG    G+ G  + ++  + PS V  L+D  V+ I  G+ F+ A
Sbjct: 612 YTWGKGANGRLGHGD-TDDKNLPSLVEALKDKQVKSIACGTNFTAA 656



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 32/329 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             ++++WG     ++   V      P+L ++L  +NI  +  G++ T  +  +G L  +G
Sbjct: 333 QGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWG 392

Query: 245 K-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG  N     +PKRV  PLE   VS S+S C   H   V+S G+++++G G 
Sbjct: 393 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS-SIS-CGPWHTAVVSSAGQLFTFGDGT 450

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  Q + G  H+AAV E             G L+T
Sbjct: 451 FGVLGHGDRKSISLPREVE-SLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 509

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD +++  PT V+ L   +   V+CG S T+  +  GH V++MGS   G
Sbjct: 510 WGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGH-VYTMGSPVYG 568

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           +LG+  +      +V   L +  V ++  G      LT    V+ WG G         + 
Sbjct: 569 QLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTD 628

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             + P LV  L   Q+  ++ G +   A+
Sbjct: 629 DKNLPSLVEALKDKQVKSIACGTNFTAAI 657



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 24/241 (9%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V  ++ G  H+A VT+ G +++WGE   GRLGHG       P L+  LS  ++  V+CGE
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGE 376

Query: 382 SHT--LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSV 438
            HT  + LS D +T W  G+ N G LGH +      PK +   L    V  +  G   + 
Sbjct: 377 YHTCAVTLSGDLYT-WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 435

Query: 439 ALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ---- 489
            ++  G +F +G G           S   P  V  L   + V  + G  H  A+ +    
Sbjct: 436 VVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVG 495

Query: 490 --------YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                     +++ WG    G+ G  +    +  P+ V  L +    Q+  G   +IA T
Sbjct: 496 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVSALVEPNFCQVACGHSLTIART 554

Query: 542 V 542
            
Sbjct: 555 T 555



 Score = 57.0 bits (136), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 8/113 (7%)

Query: 237 TGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           T G  VYG+  LG   +  + LP RV  + +  S+    C   HV  +TS+ EVY+WG G
Sbjct: 561 TMGSPVYGQ--LGNPQSDGK-LPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKG 617

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            +G+LGHG+T  +  P L+   L  K+V  ++ G + +AA+     L+ W  G
Sbjct: 618 ANGRLGHGDTDDKNLPSLVE-ALKDKQVKSIACGTNFTAAI----CLHKWVSG 665


>gi|402573744|ref|YP_006623087.1| cell wall binding protein [Desulfosporosinus meridiei DSM 13257]
 gi|402254941|gb|AFQ45216.1| putative cell wall binding protein [Desulfosporosinus meridiei DSM
           13257]
          Length = 955

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 136/260 (52%), Gaps = 20/260 (7%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           +L + S+G V+ WG+ ++G++G G T    +P ++ + GL    V  +++G +HS A+ +
Sbjct: 33  MLALNSDGTVWGWGINQNGQIGDGTT--NTKPYRVKVTGL--ADVKAIASGTTHSVALQK 88

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++TWG    G LG+G LK    P  VT LSDV AVS G   T+ L  DG TVW+ G 
Sbjct: 89  DGDVFTWGSNFSGELGNGTLKESFLPVQVTGLSDVKAVSAGTLFTVALKNDG-TVWAWGD 147

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSIS 459
            + G+LG+       TP  I  L    +  V A  + ++ALT DG V+ WG  + S    
Sbjct: 148 NSSGELGNSTGKSSITPVQIPGL--VNISAVSAQGTHTLALTDDGTVWKWGGTISS---- 201

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              P  +  LS   IV VS G  H  AL     V+AWG N  GQ G    ++    P +V
Sbjct: 202 ---PEKLESLS--NIVAVSAGYDHFTALKADGTVWAWGENGCGQLGDGTITSRT-SPIQV 255

Query: 520 VGLEDVCVRQICAGSLFSIA 539
            GL +  V+ I AG   +IA
Sbjct: 256 AGLTE--VKAISAGVRNTIA 273



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 40/338 (11%)

Query: 190 VYTWGCNLHHQILDEVRG-KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           V+ WG N + QI D     K  R ++  L ++++ I +G   +  L   G +  +G  + 
Sbjct: 42  VWGWGINQNGQIGDGTTNTKPYRVKVTGL-ADVKAIASGTTHSVALQKDGDVFTWGSNFS 100

Query: 249 G-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL---TVTSEGEVYSWGVGEHGKLGHG 304
           G L N T+    K   L   +  LS  K   A  L    + ++G V++WG    G+LG+ 
Sbjct: 101 GELGNGTL----KESFLPVQVTGLSDVKAVSAGTLFTVALKNDGTVWAWGDNSSGELGNS 156

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
              S   P  I G +    ++ VSA  +H+ A+T+DG ++ WG         G + S   
Sbjct: 157 TGKSSITPVQIPGLV---NISAVSAQGTHTLALTDDGTVWKWG---------GTISS--- 201

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  +  LS++ AVS G  H   L  DG TVW+ G    G+LG       T+P  +  L +
Sbjct: 202 PEKLESLSNIVAVSAGYDHFTALKADG-TVWAWGENGCGQLGDGTITSRTSPIQVAGLTE 260

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFH---TPVLVTGLSSHQIVD 476
             V+ + AG   ++AL  DG V+ WG+       + + + +H   +PV V  L++ Q   
Sbjct: 261 --VKAISAGVRNTIALRQDGTVWVWGIDFTKPMDQPTDLGYHLNLSPVTVPNLTNVQ--G 316

Query: 477 VSIGDSHVLALSQYNEVYAWGSN--TMGQCGQDNFSNP 512
           ++ G S  L ++    +  WG N   +G    DN + P
Sbjct: 317 IAAGPSSYLIITAEGSMLTWGFNQGILGDGTADNRTTP 354


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 146/298 (48%), Gaps = 17/298 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + S+G V S G    G+LG   T    +P+ I   L    V  VS G  HS AV
Sbjct: 4   EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCGKEHSLAV 62

Query: 338 TEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG    G+LG G+LK +   P  +  L+D+    V+CG  H+L LS+DG  V
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQ-V 121

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 122 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNN 181

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L   ++ +  + PVLV  L +  +V +S G  H   L+Q  +V+ +G N+ GQ G
Sbjct: 182 AGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLG 241

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
            D+ +     P  V  +E + V QI  GS  ++AY V  +   +S    P C    PH
Sbjct: 242 HDSTAEK-RGPQLVERIEGL-VSQIDCGSYHTLAY-VYTTGQVVSFGRGPGCTRSSPH 296



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 29/304 (9%)

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLG---LANTTIQPLPKRVPLE 265
           P L++L  ++  +  G+  +  +   G +  +G   +G LG   L  TT   +PK++   
Sbjct: 42  PALETL--HVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTF--IPKKIKTL 97

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRV 324
           A I  + V+ C   H L ++ +G+V+SWG   HG+LG G    SQ  P+ +   L G  +
Sbjct: 98  ADIKIIQVA-CGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVR-SLEGIPL 155

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---GHGDLKSRHTPTLVTELSDVGAV--SC 379
            QV+AG +HS A++  G  + WG  + G+L   G+     R+ P LV  L  +  V  SC
Sbjct: 156 AQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISC 215

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT VL+QDG  V++ G  + G+LGH+ T +   P+++E +    V ++  G+  ++A
Sbjct: 216 GYEHTAVLTQDG-KVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGL-VSQIDCGSYHTLA 273

Query: 440 LTW-DGLVFWWGLGLRSSSISFHTPVLVTG------LSSHQIVDVSIGDSHVLALSQYNE 492
             +  G V  +G G   +  S H   L         +S++ + DV +   H+ A +  N 
Sbjct: 274 YVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISANDLEDVQV--KHIFAGTYANF 331

Query: 493 VYAW 496
           V  +
Sbjct: 332 VTTY 335



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 12/216 (5%)

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLV 386
           +G  HS  +  DG + + G+   G+LG         P  +  L    V  VSCG+ H+L 
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
           +   G  V++ G+ + G+LG  +  + T  PK I+ L   ++ +V  G   S+AL+ DG 
Sbjct: 62  VCHKGR-VFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQ 120

Query: 446 VFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           VF WG      LGL     S  +P  V  L    +  V+ G +H  ALS     + WGSN
Sbjct: 121 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSN 180

Query: 500 TMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAG 533
             GQ      + PV   +P  V  L+ + V  I  G
Sbjct: 181 NAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCG 216



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 7/169 (4%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           GE H+L+L  DG TV S G  + G+LG + T +   P+ I AL    V  V  G   S+A
Sbjct: 3   GEHHSLLLLSDG-TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +   G VF WG      LG+     +   P  +  L+  +I+ V+ G  H LALS+  +V
Sbjct: 62  VCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQV 121

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           ++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 122 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 170


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 121/257 (47%), Gaps = 12/257 (4%)

Query: 260 KRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           KR+ L + I  L+  K  C  +H L V   G+++SWG    G+LG     +  R   ++ 
Sbjct: 73  KRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVK 132

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV-- 374
            L  K + Q++ G  HS A+T +G LY WG    G+LG G D K    P LV  L+ V  
Sbjct: 133 TLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPI 192

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             V+CG  HT+V+S+ G  V++ G    G+LG  D      P  +  LR  RV     G 
Sbjct: 193 AFVACGGYHTIVISKSG-AVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGE 251

Query: 435 SFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-S 488
            FSV LT DG VF  G G+       +  S   P  +  L    +  +S G  H LAL  
Sbjct: 252 EFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVP 311

Query: 489 QYNEVYAWGSNTMGQCG 505
               VYAWG    GQ G
Sbjct: 312 SRGRVYAWGLGGAGQLG 328



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 22/267 (8%)

Query: 290 VYSWGVGEHGKLGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           ++ WG   HG+LG G     N  + R             + Q++ G +++ AVT++G +Y
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKA----NEIEQIACGDNYTIAVTKEGQVY 56

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNL 402
           + G  DHG+LG    K R    L++ +  +     +CG SHTLV+++ G  ++S GS   
Sbjct: 57  SCGNNDHGQLGQE--KGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQ-LFSWGSNVE 113

Query: 403 GKLGHED-TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
           G+LG +  +  +  P++++ L    + ++  G   S+ALT +G ++ WG      LGL S
Sbjct: 114 GQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
            +     P LV  L++  I  V+ G  H + +S+   V+AWG NT GQ G  +  N  + 
Sbjct: 174 DTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNR-NV 232

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYTV 542
           P ++  L +  V     G  FS+  T+
Sbjct: 233 PCQLRTLRNSRVCYAACGEEFSVFLTM 259



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 9/239 (3%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRL-QSLPSNI-RHIEAGQFCTFLLDSTGGLLVYGK 245
           ++++WG N+  Q+ LD V      PR+ ++L + I   I  G   +  L + G L  +G 
Sbjct: 104 QLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGS 163

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LGL + T   L  ++    A V ++   C   H + ++  G V++WG    G+LG
Sbjct: 164 NSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG 223

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
             +  ++  P   +  L   RV   + G   S  +T DG ++T G G +G+LGHG+  S 
Sbjct: 224 LSDIQNRNVP-CQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSE 282

Query: 363 HTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             P  + EL  S V  +SCG  HTL L      V++ G G  G+LG+      TTP+V+
Sbjct: 283 ILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVV 341



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 8/169 (4%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG N   Q+ L +++ +    +L++L  S + +   G+  +  L   GG+   G G 
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 248 ---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
              LG  N T + LP+++ +E    +++   C   H L  V S G VY+WG+G  G+LG+
Sbjct: 271 YGQLGHGNKTSEILPRQI-MELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGN 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL-YTWGEGDH 351
               +   P+++ G       + +    SH +    D ++ + +  GDH
Sbjct: 330 RIAQNSTTPQVVFGPWVSPSGSSMINHDSHDSPKPTDCVVKHIFSGGDH 378


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 178/394 (45%), Gaps = 39/394 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS-- 274
           ++++I  G     L+   G +  +G+   G LG    +    PK   L  A+ +L++   
Sbjct: 309 DVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK---LIDALSNLNIELV 365

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
            C E H   VT  G++Y+WG G +  G LGHG  +S   PK + G L G  ++ +S G  
Sbjct: 366 ACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPW 425

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ- 389
           H+A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  V  +CG  HT  + + 
Sbjct: 426 HTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEV 485

Query: 390 ----------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
                         +++ G G+ G+LGH D      P  + AL +    +V  G S +VA
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 440 LTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVY 494
           LT  G ++  G      L +       P  V G LS   + +++ G  HV  L+   EVY
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVY 605

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFT 554
            WG    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S    
Sbjct: 606 TWGKGANGRLGHGS-TDDRNTPTLVEALKDKQVKSIACGTNFTAAICL---HKWVSGVDQ 661

Query: 555 PLCVDVRPHTFTLIREFLEQYSACFETGDYIPFC 588
            +C   R     L   F  +   C+  G  + FC
Sbjct: 662 SMCSGCR-----LPFNFKRKRHNCYNCG--LVFC 688



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 141/328 (42%), Gaps = 77/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG     ++          P+L    SN  I  +  G++ T  +  +G L  +G
Sbjct: 326 QGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWG 385

Query: 245 -----KGWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG        +PKRV  PL+   +S S+S C   H   VTS G+++++G G 
Sbjct: 386 DGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHIS-SIS-CGPWHTALVTSAGKLFTFGDGT 443

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 444 FGVLGHGDRDSISIPREVES-LKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFT 502

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGH----------- 392
           WG+GD GRLGHGD ++R  PT V  L   +   V+CG S T+ L+  GH           
Sbjct: 503 WGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQ 562

Query: 393 ----------------------------------------TVWSMGSGNLGKLGHEDTGK 412
                                                    V++ G G  G+LGH  T  
Sbjct: 563 LGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDD 622

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             TP ++EAL+  +V+ +  GT+F+ A+
Sbjct: 623 RNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 43.9 bits (102), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK +E++    V+ +  G   +  +T  G VF WG      LG    S + H P L+  L
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHH-PKLIDAL 357

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           S+  I  V+ G+ H  A++   ++Y WG  T
Sbjct: 358 SNLNIELVACGEYHTCAVTLSGDLYTWGDGT 388


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 23/346 (6%)

Query: 186 AHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A   ++ WG N   Q+ L +   + + P      S+   +  G+  T  + + G L  +G
Sbjct: 490 ADGSLWGWGRNHSGQLGLGDTDDRHA-PVQVGGDSDWTSLSVGREHTLAVKADGTLWGWG 548

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL +T  +  P+RV  ++   ++S       + L V  +G +++WG   HG+L
Sbjct: 549 QNYNGQLGLGDTDDRKTPERVGSDSDWATVS---AGTGYTLAVKDDGTLWAWGRNSHGQL 605

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+T ++  P  +           VSAG  H+ AV  DG L+ WG    G+LG GD  +
Sbjct: 606 GLGDTNNRDAPVQVA---SDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDN 662

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R  P  V   +D  AVS G  HTL +  DG T+W+ G  + G+LG  DT +   P+ +  
Sbjct: 663 RDVPEQVGSDTDWAAVSTGSGHTLAVKTDG-TLWAWGRNSDGQLGLGDTDERHAPEQVGG 721

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVD 476
              +    V AG   ++A+  DG ++ WGL L        +   H P+ V   S      
Sbjct: 722 DSDWAA--VTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGRHAPMQVG--SDSDWAT 777

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           V+ G  H LA+     + AWG N  GQ GQ  +    DQP +V G 
Sbjct: 778 VAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTYR--FDQPQEVPGW 821



 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 21/289 (7%)

Query: 226 AGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL 282
           AGQ+ T  + + G L  +G+   G LGL +T  +  P +V  ++   SLSV +    H L
Sbjct: 480 AGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDSDWTSLSVGR---EHTL 536

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
            V ++G ++ WG   +G+LG G+T  ++ P+ +  G      T VSAG  ++ AV +DG 
Sbjct: 537 AVKADGTLWGWGQNYNGQLGLGDTDDRKTPERV--GSDSDWAT-VSAGTGYTLAVKDDGT 593

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           L+ WG   HG+LG GD  +R  P  V   +D  AVS G  HTL +  DG T+W+ G  + 
Sbjct: 594 LWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAVSAGSRHTLAVKNDG-TLWAWGRNSD 652

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G+LG  DT     P+ + +   +    V  G+  ++A+  DG ++ WG      LGL   
Sbjct: 653 GQLGLGDTDNRDVPEQVGSDTDWAA--VSTGSGHTLAVKTDGTLWAWGRNSDGQLGL-GD 709

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +   H P  V G S      V+ G  H LA+     ++ WG N  GQ G
Sbjct: 710 TDERHAPEQVGGDSDWAA--VTAGWQHTLAIKNDGTLWGWGLNLYGQLG 756



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 21/352 (5%)

Query: 163 NTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR 222
           N D++ T+ P L      T    A   ++ WG N   Q+      K   P      ++  
Sbjct: 117 NVDVECTAFPVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWA 176

Query: 223 HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA 279
            + AG   T  +   G L  +G+   G LGL +T  +  P++V  ++  V++S  +    
Sbjct: 177 AVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGSDSDWVAVSAGRH--- 233

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + ++G +++WG    G+LG G T ++  P+ +  G +      V  G  HS AV E
Sbjct: 234 HTLALKADGTLWAWGRNYFGQLGLGGTTNRNAPEQV--GSH-SDWAGVIGGDRHSLAVRE 290

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG L++WG+ + G+LG GD   R  P  V   SD   VS G  HTL +  DG T+W+ G 
Sbjct: 291 DGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDG-TLWAWGG 349

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG  DT     P  + +   +    + AG  +S+A+  DG ++ WG      LGL
Sbjct: 350 NGFGQLGLGDTDNRDAPVQVGSDNDWAA--LNAGQRYSLAVKNDGSLWSWGWNDFGELGL 407

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              +   H P  V G    +   V+ G  H L +     + AWG N  G+ G
Sbjct: 408 -GDTDDRHAPEQVGG--GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELG 456



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 172/407 (42%), Gaps = 70/407 (17%)

Query: 190 VYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           +++WG N   Q+   D V  +  RP      S+   + AG   T  + + G L  +G   
Sbjct: 294 LWSWGQNNVGQLGLGDTVERR--RPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNG 351

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LGL +T  +  P +V  +    +L+     + + L V ++G ++SWG  + G+LG G
Sbjct: 352 FGQLGLGDTDNRDAPVQVGSDNDWAALN---AGQRYSLAVKNDGSLWSWGWNDFGELGLG 408

Query: 305 NTLSQRRPKLIMGGLYGKRVTQ-------------------------------------- 326
           +T  +  P+ + GG+    VT                                       
Sbjct: 409 DTDDRHAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQ 468

Query: 327 ---------VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
                     SAG   + AV  DG L+ WG    G+LG GD   RH P  V   SD  ++
Sbjct: 469 TVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDSDWTSL 528

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           S G  HTL +  DG T+W  G    G+LG  DT    TP+ + +   +    V AGT ++
Sbjct: 529 SVGREHTLAVKADG-TLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWAT--VSAGTGYT 585

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +A+  DG ++ WG      LGL  ++ +   PV V   S +    VS G  H LA+    
Sbjct: 586 LAVKDDGTLWAWGRNSHGQLGLGDTN-NRDAPVQVA--SDNDWAAVSAGSRHTLAVKNDG 642

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            ++AWG N+ GQ G  +  N  D P +V    D       +G   ++
Sbjct: 643 TLWAWGRNSDGQLGLGDTDNR-DVPEQVGSDTDWAAVSTGSGHTLAV 688



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 133/295 (45%), Gaps = 20/295 (6%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           A  T+      V +E    +  V      H L + ++G +++WG    G+LG G+T  + 
Sbjct: 107 ATGTVDGAVMNVDVE--CTAFPVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRD 164

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
            P  +           VSAG +++ AV +DG L+ WGE   G+LG GD   RH P  V  
Sbjct: 165 TPAQVG---SDTDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGS 221

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
            SD  AVS G  HTL L  DG T+W+ G    G+LG   T     P+ + +   +    V
Sbjct: 222 DSDWVAVSAGRHHTLALKADG-TLWAWGRNYFGQLGLGGTTNRNAPEQVGSHSDW--AGV 278

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
             G   S+A+  DG ++ WG      LGL   ++    P  V   +      VS G  H 
Sbjct: 279 IGGDRHSLAVREDGTLWSWGQNNVGQLGL-GDTVERRRPEQVG--NDSDWATVSAGLLHT 335

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           LA+     ++AWG N  GQ G  +  N  D P +V    D     + AG  +S+A
Sbjct: 336 LAVKNDGTLWAWGGNGFGQLGLGDTDNR-DAPVQVGSDNDWAA--LNAGQRYSLA 387



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 167/365 (45%), Gaps = 28/365 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSR--PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           A   ++ WG N   Q+   + G  +R  P      S+   +  G   +  +   G L  +
Sbjct: 240 ADGTLWAWGRNYFGQL--GLGGTTNRNAPEQVGSHSDWAGVIGGDRHSLAVREDGTLWSW 297

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G+   G LGL +T  +  P++V  ++   ++S       H L V ++G +++WG    G+
Sbjct: 298 GQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLL---HTLAVKNDGTLWAWGGNGFGQ 354

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G+T ++  P  +           ++AG  +S AV  DG L++WG  D G LG GD  
Sbjct: 355 LGLGDTDNRDAPVQVG---SDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTD 411

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            RH P  V    +  AV+ G  HTL +  DG T+ + G  + G+LG      +T+P  ++
Sbjct: 412 DRHAPEQVGGGMEWAAVTAGMYHTLGVKADG-TLRAWGRNDFGELGLGVMVYITSP--LQ 468

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            + +       AG   + A+  DG ++ WG      LGL   +   H PV V G S    
Sbjct: 469 TVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGL-GDTDDRHAPVQVGGDS--DW 525

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             +S+G  H LA+     ++ WG N  GQ G  + ++    P +V    D     + AG+
Sbjct: 526 TSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGD-TDDRKTPERVGSDSDWAT--VSAGT 582

Query: 535 LFSIA 539
            +++A
Sbjct: 583 GYTLA 587


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 153/302 (50%), Gaps = 17/302 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P++           V  C   H + +  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVG-CGLKHTVFLLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS- 361
           H    S+++P+ ++  L  + +  VS G SH+ A+ + G +++WG G +G+LG  + +  
Sbjct: 68  HEK--SRKKPEHVV-ALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEEC 124

Query: 362 RHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKV 418
              P  +  LSDV    V+CG  H+  LS+ G  V+S G    G+LG    G  ++TP++
Sbjct: 125 VRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQ-VFSWGQNQFGQLGLGMHGSSISTPQI 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L+     ++ AG + S A+T  G VF WG      LGL  +   +  P L+  L S 
Sbjct: 184 IQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWF-PALLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +++ VS G+ H  AL++   V+ +G+   GQ G  N +N    P KV  L    V QI  
Sbjct: 243 RVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGH-NCTNHEINPRKVFELMGNVVTQISC 301

Query: 533 GS 534
           GS
Sbjct: 302 GS 303



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 117/232 (50%), Gaps = 25/232 (10%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       +  R+ +      +GKRV  V  G  H+  + +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEF----FHGKRVCDVGCGLKHTVFLLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L    + AVSCGESHTL L+  G  V+S G G+ G+L
Sbjct: 60  CNDLGQLGHE--KSRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQ-VFSWGLGSNGQL 116

Query: 406 GHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW--------GLGLRSS 456
           G  +  + V  P+ I+ L   ++ +V  G   S AL+  G VF W        GLG+  S
Sbjct: 117 GLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGS 176

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           SIS  TP ++  L       +S G +H  A++    V+ WG N  GQ G ++
Sbjct: 177 SIS--TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLND 226



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 14/255 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +      I  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNG 114

Query: 247 WLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG--- 302
            LGL N      +P+ +    + V ++   C   H   ++  G+V+SWG  + G+LG   
Sbjct: 115 QLGLNNFEECVRVPRNIKC-LSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGM 173

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG+++S   P++I   L G    Q+SAG +HS A+T  G ++ WG+   G+LG  D K R
Sbjct: 174 HGSSIST--PQIIQ-SLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDR 230

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             P L+  L    V  VSCGE HT  L++    V++ G+G  G+LGH  T     P+ + 
Sbjct: 231 WFPALLKSLRSQRVIFVSCGEDHTAALTKL-RGVFTFGAGGYGQLGHNCTNHEINPRKVF 289

Query: 421 ALRKFRVRKVCAGTS 435
            L    V ++  G++
Sbjct: 290 ELMGNVVTQISCGST 304



 Score = 98.6 bits (244), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 11/228 (4%)

Query: 231 TFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE 289
            FLLD  G +   G   LG L +   +  P+ V    A + ++VS C E+H L +  +G+
Sbjct: 47  VFLLDD-GTVYTCGCNDLGQLGHEKSRKKPEHVVALDAQIIVAVS-CGESHTLALNDKGQ 104

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V+SWG+G +G+LG  N     R    +  L   ++ QV+ G+ HS A+++ G +++WG+ 
Sbjct: 105 VFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQN 164

Query: 350 DHGRLG---HGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
             G+LG   HG   S  TP ++  L  +    +S G +H+  ++  G  V+  G    G+
Sbjct: 165 QFGQLGLGMHGS--SISTPQIIQSLQGIPFAQLSAGGAHSFAITLSG-AVFGWGKNKFGQ 221

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           LG  DT     P ++++LR  RV  V  G   + ALT    VF +G G
Sbjct: 222 LGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG 269



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 21/214 (9%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--------VGAVSCGESHTLVLSQDGHTV 394
           +  WG   +G+LG G +       +V E           V  V CG  HT+ L  DG TV
Sbjct: 1   MLCWGNASYGQLGLGGIDEE----IVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDG-TV 55

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           ++ G  +LG+LGHE + K   P+ + AL    +  V  G S ++AL   G VF WGLG  
Sbjct: 56  YTCGCNDLGQLGHEKSRK--KPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSN 113

Query: 453 ----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
               L +       P  +  LS  QI  V+ G  H  ALS+  +V++WG N  GQ G   
Sbjct: 114 GQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGM 173

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             + +  P  +  L+ +   Q+ AG   S A T+
Sbjct: 174 HGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 137/284 (48%), Gaps = 21/284 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G +  G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 369 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 428

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVL---- 387
           +A VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  +    
Sbjct: 429 TAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVM 488

Query: 388 -------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                  +     +++ G G+ G+LGH D      P  + AL +    +V  G S +VA 
Sbjct: 489 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVAR 548

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G LS   + +++ G  HV  L+   EVY 
Sbjct: 549 TTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYT 608

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           WG    G+ G  + ++  + PS V  L+D  V+ I  G+ F+ A
Sbjct: 609 WGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTSFTAA 651



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 157/330 (47%), Gaps = 34/330 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
             ++++WG     ++   V      P+L    SN  I  +  G++ T  +  +G L  +G
Sbjct: 328 QGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWG 387

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   VS S+S C   H   VTS G+++++G G 
Sbjct: 388 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS-SIS-CGPWHTAVVTSAGQLFTFGDGT 445

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   PK +   L G R  Q + G  H+AAV E             G L+T
Sbjct: 446 FGVLGHGDRKSISLPKEVE-SLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFT 504

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD +++  PT V  L   +   V+CG S T+  +  GH V++MGS   G
Sbjct: 505 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGH-VYTMGSPVYG 563

Query: 404 KLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSS 457
           +LG+    GK+ T +V   L K  V ++  G      LT    V+ WG G         +
Sbjct: 564 QLGNPLADGKLPT-RVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDT 622

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              ++P LV  L   Q+  ++ G S   A+
Sbjct: 623 DDRNSPSLVEALKDKQVKSIACGTSFTAAI 652



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 137/305 (44%), Gaps = 38/305 (12%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
            PK   LE+A+V L V    C   H   VT +GE++SWG    G+LGHG       PKLI
Sbjct: 300 FPK--ALESAVV-LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLI 356

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---E 370
              L    +  V+ G  H+ AVT  G LYTWG+G +  G LGHG+  S   P  V    E
Sbjct: 357 -DALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 415

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V ++SCG  HT V++  G  +++ G G  G LGH D   ++ PK +E+L+  R  + 
Sbjct: 416 GIHVSSISCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQA 474

Query: 431 CAGTSFSVAL------------TWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         +   P  V  L    
Sbjct: 475 ACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 534

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ---PSKVVG-LEDVCVRQ 529
              V+ G S  +A +    VY  GS   GQ G     NP+     P++V G L    V +
Sbjct: 535 FCQVACGHSLTVARTTSGHVYTMGSPVYGQLG-----NPLADGKLPTRVEGKLSKSFVEE 589

Query: 530 ICAGS 534
           I  G+
Sbjct: 590 IACGA 594



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 237 TGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           T G  VYG+    LA+     LP RV  + +   +    C   HV  +TS+ EVY+WG G
Sbjct: 556 TMGSPVYGQLGNPLADGK---LPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKG 612

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            +G+LGHG+T  +  P L+   L  K+V  ++ G S +AA+     L+ W  G
Sbjct: 613 ANGRLGHGDTDDRNSPSLVE-ALKDKQVKSIACGTSFTAAI----CLHKWVSG 660


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 23/322 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A+ ++    C E H   V++ G++++WG G H  G LGHG  +S   PK + G L G +V
Sbjct: 317 AVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQV 376

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGES 382
             V+ G  HSA  T +G L+T+G+G  G LGHGD +S   P  V  LS +    V+CG  
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVW 436

Query: 383 HTL----VLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           HT     V+SQ G  +     ++ G G+  +LGH        P  + AL  +   ++  G
Sbjct: 437 HTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACG 496

Query: 434 TSFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            + +VALT  G VF  G    G   + +S    P LV   L    + ++S G  HV  L+
Sbjct: 497 HTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLT 556

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             +EV+ WG    G+ G  +  +    P+ V  L+D  V+ I  GS F+ +  +   +  
Sbjct: 557 SRSEVFTWGRGANGRLGHGDTED-RRSPTFVEALKDRNVKSISCGSNFTASICI---HKW 612

Query: 549 LSSAFTPLCVDVRPHTFTLIRE 570
           +S A   +C   R   F   R+
Sbjct: 613 VSGADQSVCSGCR-QAFGFTRK 633


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 167/352 (47%), Gaps = 25/352 (7%)

Query: 189 KVYTWGCNLHHQI----LDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVY 243
           ++Y WG   H Q+    ++E +   +  R+   P S +  I  G   T  L ++G +   
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQ-ILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 244 GKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G      LG    T +PL  ++P E     ++   C   H + ++  G+V+SWG  E G+
Sbjct: 61  GSNDYSQLGHELPTKRPL--QIP-ELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQ 117

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HG 357
           LGH +     +   I+  L  K V Q++ G +HS A+T  G LY+WG   +G+LG     
Sbjct: 118 LGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPN 177

Query: 358 DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
           DL+  +TP  +T L    V A++CG +H+ ++S+    V+  G  N G+LG  D      
Sbjct: 178 DLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSS-AVFGWGRNNCGQLGLNDETNRAY 236

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLS 470
           P  ++ LR   VR V  G  FSV LT +G VF  G G         S +   P +V  L 
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM 296

Query: 471 SHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
              I  V+ G+ H LAL      +Y +G  + GQ G  N +  ++ P  V+G
Sbjct: 297 GSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRN-TKSLNLPQLVIG 347



 Score = 56.6 bits (135), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 5/151 (3%)

Query: 395 WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           W   S G LG LG  +  ++ TP  I       V ++  G   ++ LT  G V+  G   
Sbjct: 6   WGNASHGQLG-LGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSND 64

Query: 454 RSS---SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            S     +    P+ +  L  + I  ++ G  H +ALS++ +V++WG N  GQ G  +  
Sbjct: 65  YSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASDQ 124

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + V  P  V  L    V QI  GS  S+A T
Sbjct: 125 DIVKLPKIVRNLVSKTVVQIACGSNHSLALT 155


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 176/381 (46%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           RP   ++  ++  I  G     L+   G +  +G+   G LG         PK V    A
Sbjct: 252 RPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEF-LA 310

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + ++    C E H   V++ G+++SWG G H  G LGHG+ +S   PK + G L G +V 
Sbjct: 311 LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVL 370

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESH 383
            V+ G  HSA  T +G L+T+G+G  G LGHG+ +S   P  V  L+ +    V+C   H
Sbjct: 371 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 430

Query: 384 TLVLSQ-DGHTVWSM--------GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
           T  + +  G T  SM        G G+  +LGH +      P  + +L  +   K+  G 
Sbjct: 431 TAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGH 490

Query: 435 SFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
           +F+VALT  G VF  G    G   +SIS    P LV   L    + +++ G  HV  L+ 
Sbjct: 491 TFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTS 550

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  V+ +  GS F+ +  +   +  +
Sbjct: 551 RSEVFTWGKGANGRLGHGDTEDK-RTPTLVEALRDRHVKSLSCGSNFTSSICI---HKWV 606

Query: 550 SSAFTPLCVDVRPHTFTLIRE 570
           S A   +C   R   F   R+
Sbjct: 607 SGADQSICSGCR-QAFGFTRK 626



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 75/326 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG  +  ++   ++   SRP+L    +  NI  +  G++ T ++ ++G L  +G
Sbjct: 278 QGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWG 337

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PLE   V LSV+ C   H    T+ G+++++G G 
Sbjct: 338 DGIHNVGLLGHGSDISHWIPKRVSGPLEGLQV-LSVA-CGTWHSALATANGKLFTFGDGA 395

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYTWG 347
            G LGHGN  S   PK +   L G +  +V+    H+AA+ E             L+TWG
Sbjct: 396 FGVLGHGNRESVSYPKEVQS-LNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWG 454

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT------------ 393
           +GD  RLGHG+ ++   PT V+ L D     ++CG + T+ L+  GH             
Sbjct: 455 DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 514

Query: 394 ---------------------------------------VWSMGSGNLGKLGHEDTGKVT 414
                                                  V++ G G  G+LGH DT    
Sbjct: 515 NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 574

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVAL 440
           TP ++EALR   V+ +  G++F+ ++
Sbjct: 575 TPTLVEALRDRHVKSLSCGSNFTSSI 600


>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
          Length = 1128

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 176/381 (46%), Gaps = 36/381 (9%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN------IRHIEAGQFCTFLLDS 236
           ++  +++ ++WG +   Q+     G   R ++ +LP +      I+ +  G   T  +  
Sbjct: 1   MNQGYTEFFSWGNDEMGQLGHGQEG-PDRKKIFNLPKSLSFEVLIQQVSCGSAHTSFISK 59

Query: 237 TGGLLVYG---KGWLGLANTTIQ----PL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
            G +  +G    G LG+ +  I+    PL     V L+   V +S   C   H   +TS 
Sbjct: 60  QGYVFSFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQIS---CGGFHTAVLTSV 116

Query: 288 GEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           G+VY WG    G+ G     +Q    P  +      K   QV  G  H+A V+  G LYT
Sbjct: 117 GDVYIWGRNLQGQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSSTGELYT 176

Query: 346 WGEGDHGRLGHGDLKSRHT---PTLVTELSDVG-AVSCGESHTLVLSQDGHTVWSMGSGN 401
           +G+   G+LG G ++ ++T     LVT +S+    VSCG  HTLVL+  G TV+ MG+  
Sbjct: 177 FGDNSEGQLGIG-VEFKNTVDRAALVTGISEETIQVSCGYKHTLVLTNHG-TVFGMGTNK 234

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH 461
             +L      K + P  I+ +  F V K+ AG  FSVA+T    +  WG G       F 
Sbjct: 235 RYELASGTLQKSSQPIRIQTIDMFAVEKIIAG-GFSVAITSQNELLVWGSG---DFGVFQ 290

Query: 462 TPVLVTGLSSHQIVDVSIG---DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
           +P  +  +   + VDVS+    DS   A+     VY WG N  GQ GQ +F      P+K
Sbjct: 291 SPQKIF-MEDVRFVDVSLSKSYDSFGAAIDDQGFVYTWGQNQFGQLGQGDFR-LRKLPTK 348

Query: 519 VVGLEDVCVRQICAGSLFSIA 539
           +  L    VRQ+ AG  F +A
Sbjct: 349 IPQLRKKKVRQLVAGGSFIVA 369



 Score = 77.0 bits (188), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 121/315 (38%), Gaps = 65/315 (20%)

Query: 190 VYTWGCNLHHQ--ILDEVRGKCSRP----RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           V+++GCN   Q  + D      S P     L SL +N   I  G F T +L S G + ++
Sbjct: 63  VFSFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQISCGGFHTAVLTSVGDVYIW 122

Query: 244 GKGWLGLANTTIQP-----LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G+   G    +I        P ++  ++A  +     C + H   V+S GE+Y++G    
Sbjct: 123 GRNLQGQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSE 182

Query: 299 GKLGHG----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           G+LG G    NT+   R  L+ G    +   QVS G+ H+  +T  G ++  G      L
Sbjct: 183 GQLGIGVEFKNTVD--RAALVTG--ISEETIQVSCGYKHTLVLTNHGTVFGMGTNKRYEL 238

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVW----------------- 395
             G L+    P  +   ++  V  +  G     + SQ+   VW                 
Sbjct: 239 ASGTLQKSSQPIRIQTIDMFAVEKIIAGGFSVAITSQNELLVWGSGDFGVFQSPQKIFME 298

Query: 396 ---------------------------SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
                                      + G    G+LG  D      P  I  LRK +VR
Sbjct: 299 DVRFVDVSLSKSYDSFGAAIDDQGFVYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVR 358

Query: 429 KVCAGTSFSVALTWD 443
           ++ AG SF VAL  D
Sbjct: 359 QLVAGGSFIVALGKD 373


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 146/285 (51%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    +++RP+ + G L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--ARKRPEHV-GALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LS++    V+CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  K T+P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S ++V +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDDNDRY-VPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSVVTQITCGRQHTTAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 13/272 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG--- 244
           VYT GCN   Q+  E   K  RP  + +L + NI  +  G+  T  L+  G +  +G   
Sbjct: 55  VYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT 112

Query: 245 KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G LGL  T     +P+ +   + I  + V+ C   H L ++   EV+SWG  ++G+LG 
Sbjct: 113 DGQLGLPGTEECVRVPRNIRSLSEIQIVQVA-CGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G    ++    ++  L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+
Sbjct: 172 GYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            PTL+  L    V  + CGE HT  L+++G  V++ G+G  G+LGH  T     P+ +  
Sbjct: 232 VPTLLKSLRSQKVVHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 422 LRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
           L    V ++  G   + A     G ++ +GLG
Sbjct: 291 LMGSVVTQITCGRQHTTAFVPSSGRIYSFGLG 322



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 117/262 (44%), Gaps = 20/262 (7%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLGKL 405
             D G+LGH   + R       +  ++ AVSCGE+HTL L+  G    W + + G LG  
Sbjct: 60  CNDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G E+   V  P+ I +L + ++ +V  G   S+AL+    VF WG      LGL      
Sbjct: 120 GTEEC--VRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
             +P ++  L       ++ G +H   L+    ++ WG N  GQ G ++  N    P+ +
Sbjct: 178 QTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-DNDRYVPTLL 236

Query: 520 VGLEDVCVRQICAGSLFSIAYT 541
             L    V  IC G   + A T
Sbjct: 237 KSLRSQKVVHICCGEDHTAALT 258



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE   K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   QI AG   S   T+
Sbjct: 178 QTSPQMIKSLLGIPFAQIAAGGAHSFVLTL 207



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 19/247 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDSTGG 239
            +VY WG     Q+      +C R     +P NIR         +  G + +  L     
Sbjct: 103 GQVYAWGLATDGQLGLPGTEECVR-----VPRNIRSLSEIQIVQVACGYYHSLALSKGSE 157

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +  +G+   G LGL     +    ++      +  +      AH   +T  G ++ WG  
Sbjct: 158 VFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRN 217

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           + G+LG  +   +  P L+   L  ++V  +  G  H+AA+T++G ++T+G G +G+LGH
Sbjct: 218 KFGQLGLNDDNDRYVPTLLKS-LRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGH 276

Query: 357 GDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
                   P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    
Sbjct: 277 NSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRK 336

Query: 415 TPKVIEA 421
           +P  ++ 
Sbjct: 337 SPFTVKG 343


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 18/290 (6%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR-RPKLIMGGLYGKR 323
           + ++ S+S   C  AHV+ +TS G+V SWG G  G+LGHG  +S    PK +   L G  
Sbjct: 47  QPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPKAVT-SLDGYF 105

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE 381
           +T VSAG  HS  V+++G ++T G+G  G+LGHGD  S  +P  V+   D  V  V+CG 
Sbjct: 106 ITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGM 165

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            H+LVL + G+ V+  GSG  G+LG  ++    V  PKV+       +  + A    S A
Sbjct: 166 RHSLVLLK-GNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAA 224

Query: 440 LTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           ++ DG V+ WG G +    +   P  +   SS     V++G +H LA+S   EV   G N
Sbjct: 225 VSVDGHVYTWGRGFKGFEDA-RVPQCLN--SSLNFTKVALGWNHALAMSGEGEVCMLGGN 281

Query: 500 TMGQCGQ-DNFSNPVDQP-------SKVVGLEDVCVRQICAGSLFSIAYT 541
            +G      N S     P        KV GL+   +  I  G+  S+  T
Sbjct: 282 HLGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVT 331



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 23/166 (13%)

Query: 238 GGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGV 295
           G +  +G+G+ G  +        RVP +    SL+ +K +    H L ++ EGEV   G 
Sbjct: 229 GHVYTWGRGFKGFEDA-------RVP-QCLNSSLNFTKVALGWNHALAMSGEGEVCMLGG 280

Query: 296 GEHGKLGHGNTLSQRR--PKL------IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
              G L     +S  +  P L       + GL G ++T ++ G  HS  VTE G + TWG
Sbjct: 281 NHLGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWG 340

Query: 348 EGDHGRLGHGDLKSRHTPTLVT---ELSDVGA--VSCGESHTLVLS 388
            G+HG+LG GD + R +P  V+   +L++  +  V CG   T  ++
Sbjct: 341 WGEHGQLGLGDTRDRISPVTVSLGYDLNEAASVIVFCGSGFTFAVT 386



 Score = 42.4 bits (98), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 13/154 (8%)

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG- 452
           VWS G+G  G+LG +       P+++       +  +  G +  +ALT  G V  WG G 
Sbjct: 20  VWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGN 79

Query: 453 --------LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                   + S+S+    P  VT L  + I  VS G  H   +S    V+  G  + GQ 
Sbjct: 80  SGQLGHGLVVSNSL---YPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQL 136

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
           G  + ++    P KV    D  V Q+  G   S+
Sbjct: 137 GHGDHASHC-SPVKVSCFVDQHVEQVACGMRHSL 169


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 99/178 (55%), Gaps = 7/178 (3%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   VT  G VY+WG G +G+LGHG+ + +  P+ +        V  VSAG  H+ AVT
Sbjct: 283 GHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP--RIKGEVKSVSAGFYHTVAVT 340

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTV 394
             G L+TWG+G  G+LGH D   R  PTLV    +    V A   G SHTLVL++ G  V
Sbjct: 341 HHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQ-V 399

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +S GSG+ G+LGH +     +P  + AL   R   + AG + SVALT  G ++ WG G
Sbjct: 400 FSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCG 457



 Score =  103 bits (257), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 19/250 (7%)

Query: 280 HVLTVTSEGEVYSWGVG-EHGK--LGHGNTLSQRRPKLIMGGLYGKRVTQVSA---GHSH 333
           H LT+T   +V   G+  E GK  L   +  S ++ ++   GL   R    SA   G  H
Sbjct: 225 HHLTITKSCQVLVGGLTLEAGKTVLQSASFNSIKKHRVTRAGLSLLRRVVFSALSFGAGH 284

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGH 392
            AAVT+ GL+YTWG+G +G+LGHGD   +  P  V  +  +V +VS G  HT+ ++  G 
Sbjct: 285 CAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKSVSAGFYHTVAVTHHG- 343

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR--VRKVCAGTSFSVALTWDGLVFWWG 450
            +++ G G  GKLGH D  +   P ++ A  ++   V    AG S ++ L   G VF +G
Sbjct: 344 ALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFG 403

Query: 451 LGLRSSSISFH-------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
            G   S    H       +P  ++ L S + V ++ G +H +AL+   ++Y WG   +G+
Sbjct: 404 SG--DSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGR 461

Query: 504 CGQDNFSNPV 513
            G  + S+ V
Sbjct: 462 LGHGSDSDEV 471



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 5/152 (3%)

Query: 225 EAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV 281
           +AG   T +L+  G +  +G G    LG  N   Q  P  +    +   +S++    AH 
Sbjct: 384 QAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIA-AGFAHS 442

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           + +T +G++Y+WG G+ G+LGHG+   +  P KL +      +   V+AG +H+     +
Sbjct: 443 VALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSE 502

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           G L T G   HGR+  G        TL T +S
Sbjct: 503 GSLITLGRVSHGRMAEGSCAQDMLDTLHTAIS 534


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 107/189 (56%), Gaps = 8/189 (4%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           V  +   C   H L +T+ G V+S+G G  G LGHG+ L+   P+L+   L+G  V Q++
Sbjct: 334 VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLV-DALWGVGVAQIA 392

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA----VSCGESHT 384
           AG +HSA+++  G +YTWG G +G LGH D+ +R  PT V  L D G     ++CG  HT
Sbjct: 393 AGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHT 452

Query: 385 LVLSQDGHTV-WSMGSGNLGKLGHEDTGKVTTPKVIEA--LRKFRVRKVCAGTSFSVALT 441
           L ++  G  V  + G G+ G  G   T  V TP +I+   L   +V ++ AG+  SVA+T
Sbjct: 453 LAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVT 512

Query: 442 WDGLVFWWG 450
             G V+ WG
Sbjct: 513 EGGCVYTWG 521



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 135/288 (46%), Gaps = 34/288 (11%)

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG----- 304
           L    I P P+      A+  ++   C + H   VT+ G + SWG  E G+LG G     
Sbjct: 248 LREAVIDP-PEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDS 306

Query: 305 ------NTLSQRR------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
                  +L +RR      P+L+  G    + T V+ G  H+ A+T +G ++++G G  G
Sbjct: 307 SSKGDAKSLIRRRADASMMPRLVGSGHV--KFTSVACGAGHTLALTANGRVFSFGRGAFG 364

Query: 353 RLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LGHGD  +   P LV  L  VG   ++ G++H+  LS  G  V++ G G  G LGH D 
Sbjct: 365 ALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGR-VYTWGRGKYGALGHRDV 423

Query: 411 GKVTTPKVIEALRKFRVR---KVCAGT-SFSVALTWDGLVFWWGLGLRS-----SSISFH 461
              + P  ++AL    VR     C G  + ++A    G++  WG G        ++    
Sbjct: 424 DNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVL 483

Query: 462 TPVLVTG--LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
           TP ++    L   ++  +S G  H +A+++   VY WG+ T GQ G +
Sbjct: 484 TPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGHE 531



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 138/296 (46%), Gaps = 36/296 (12%)

Query: 280 HVLTVTSEGEVYSWG--VGEHGKLGHGNTLSQR---RPKLIMGGLYGKRVTQVSAGHSHS 334
           H + VTS GEVY++G   GE   L     L +     P++        RV  V+ G  H 
Sbjct: 219 HSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHC 278

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG---------DLKS----RHTPTLVTELSDVG-----A 376
           AAVT  G+L +WG  + G+LG G         D KS    R   +++  L   G     +
Sbjct: 279 AAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTS 338

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           V+CG  HTL L+ +G  V+S G G  G LGH D      P++++AL    V ++ AG + 
Sbjct: 339 VACGAGHTLALTANGR-VFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNH 397

Query: 437 SVALTWDGLVFWWG------LGLRS-SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S +L+  G V+ WG      LG R   + S  TPV     +  +   ++ G  H LA++ 
Sbjct: 398 SASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAG 457

Query: 490 YNE--VYAWGSNTMGQCGQDNFSNPVDQPSKV--VGLEDVCVRQICAGSLFSIAYT 541
                + AWG  + G  G    ++ V  P+ +    L D  V QI AGS  S+A T
Sbjct: 458 GGSGVLLAWGRGSSGPAGTGATAD-VLTPTIIDRALLGDEKVFQISAGSKHSVAVT 512



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 93/225 (41%), Gaps = 35/225 (15%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVY 243
           A+ +V+++G      +    R  C  PRL        +  I AG   +  L ++G +  +
Sbjct: 351 ANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTW 410

Query: 244 GKGWLG-LANTTIQPLPKRVPLEA---AIVSLSVSKCSEAHVLTVTSEGE--VYSWGVGE 297
           G+G  G L +  +    +  P++A   A V      C   H L +   G   + +WG G 
Sbjct: 411 GRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGS 470

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYG-KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            G  G G T     P +I   L G ++V Q+SAG  HS AVTE G +YTWG    G+LGH
Sbjct: 471 SGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGH 530

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
                        EL D G                H VW + +G 
Sbjct: 531 -------------ELGDAGTSE-------------HGVWKLSTGG 549



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 114/293 (38%), Gaps = 60/293 (20%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE-------- 370
           L G+ VT V+ G  HS AVT  G +Y +G+        G+ K+   PT + E        
Sbjct: 205 LDGRDVTHVAGGARHSVAVTSAGEVYAFGDCS------GEGKALSAPTRLREAVIDPPEV 258

Query: 371 ------LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
                 +  V  V+CG+ H   ++  G  + S G+   G+LG       ++    ++L +
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSG-VLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIR 317

Query: 425 FRV----------------RKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTP 463
            R                   V  G   ++ALT +G VF +G G          ++   P
Sbjct: 318 RRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVP 377

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            LV  L    +  ++ GD+H  +LS    VY WG    G  G  +  N   +P+ V  L+
Sbjct: 378 RLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDN-RSRPTPVQALD 436

Query: 524 DVCVR--QICAGSLFSIAY---------------TVPPSNSALSSAFTPLCVD 559
           D  VR  QI  G   ++A                + P    A +   TP  +D
Sbjct: 437 DAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIID 489


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 184/390 (47%), Gaps = 18/390 (4%)

Query: 171 TPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQ 228
           +P +  N G +  +VA      WG N   Q+ D      S P   SLP+ +    + AG 
Sbjct: 40  SPVVAQN-GPSPSAVAADTALAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGA 98

Query: 229 FCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT 285
                + S G +L +G    G LG   T+ +  P  V L   +   +V+  +  H L +T
Sbjct: 99  AHNLAVTSAGTILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAA-HSLALT 157

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           S G V +WG    G+LG G T+    P + +    G   T V+AG +HS AVT  G +  
Sbjct: 158 SAGTVLAWGANTIGQLGDGTTIDSPAP-VDVNLPPGVTATAVAAGAAHSLAVTSAGTVLA 216

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+   G+LG G      TP +V+  S V A  V+ G+ H+L ++  G  V + GS + G
Sbjct: 217 WGDNASGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGA-VLAWGSNSSG 275

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           +LG   T   +TP  +       V  V AG +FS+AL+  G V  WG      LG   ++
Sbjct: 276 QLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLG-DGTT 334

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               TPV V+  +   +  ++ GD+H LA++      AWG+N+ GQ G    ++ V   +
Sbjct: 335 ADRSTPVTVSSPAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVA 394

Query: 518 KVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
             + +    +  I AG+  S+A   PP++S
Sbjct: 395 VSLPVGTTTLTAIAAGAAHSVAVAAPPTSS 424


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 137/291 (47%), Gaps = 28/291 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGK--LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C + H   +T  G++YSWG G H    LGHGN  S   PK + G L G  V+ V+ G  H
Sbjct: 346 CGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWH 405

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL---- 387
           +A V   G L+T+G+G  G LGHGD +S   P  V  L    V  V+CG  HT  +    
Sbjct: 406 TAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVT 465

Query: 388 ---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
                    S  G  V++ G G  G+LGH D      P+ + +L    + +V  G S +V
Sbjct: 466 NEASEAEVDSSRGQ-VFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTV 524

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYN 491
           + T  G V+  G      LG  ++  +F  P  V G +    + +++ G  HV  L+  +
Sbjct: 525 SRTSRGHVYTMGSTAYGQLGNPTAKGNF--PERVEGDIVEASVEEIACGSYHVAVLTSKS 582

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           E+Y WG    GQ G  N  N   +P+ V  L +  V+ I  GS F+    V
Sbjct: 583 EIYTWGKGLNGQLGHGNVENK-REPAVVGFLREKQVKAITCGSNFTAVICV 632


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 176/381 (46%), Gaps = 27/381 (7%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           RP   ++  ++  I  G     L+   G +  +G+   G LG         PK V    A
Sbjct: 243 RPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEF-LA 301

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + ++    C E H   V++ G+++SWG G H  G LGHG+ +S   PK + G L G +V 
Sbjct: 302 LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVL 361

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESH 383
            V+ G  HSA  T +G L+T+G+G  G LGHG+ +S   P  V  L+ +    V+C   H
Sbjct: 362 SVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWH 421

Query: 384 TLVLSQ-DGHTVWSM--------GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
           T  + +  G T  SM        G G+  +LGH +      P  + +L  +   K+  G 
Sbjct: 422 TAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGH 481

Query: 435 SFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLVTG-LSSHQIVDVSIGDSHVLALSQ 489
           +F+VALT  G VF  G    G   +SIS    P LV   L    + +++ G  HV  L+ 
Sbjct: 482 TFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTS 541

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
            +EV+ WG    G+ G  +  +    P+ V  L D  V+ +  GS F+ +  +   +  +
Sbjct: 542 RSEVFTWGKGANGRLGHGDTEDK-RTPTLVEALRDRHVKSLSCGSNFTSSICI---HKWV 597

Query: 550 SSAFTPLCVDVRPHTFTLIRE 570
           S A   +C   R   F   R+
Sbjct: 598 SGADQSICSGCR-QAFGFTRK 617



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 75/326 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG  +  ++   ++   SRP+L    +  NI  +  G++ T ++ ++G L  +G
Sbjct: 269 QGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWG 328

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  +     +PKRV  PLE   V LSV+ C   H    T+ G+++++G G 
Sbjct: 329 DGIHNVGLLGHGSDISHWIPKRVSGPLEGLQV-LSVA-CGTWHSALATANGKLFTFGDGA 386

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYTWG 347
            G LGHGN  S   PK +   L G +  +V+    H+AA+ E             L+TWG
Sbjct: 387 FGVLGHGNRESVSYPKEVQS-LNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWG 445

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT------------ 393
           +GD  RLGHG+ ++   PT V+ L D     ++CG + T+ L+  GH             
Sbjct: 446 DGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLG 505

Query: 394 ---------------------------------------VWSMGSGNLGKLGHEDTGKVT 414
                                                  V++ G G  G+LGH DT    
Sbjct: 506 NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKR 565

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVAL 440
           TP ++EALR   V+ +  G++F+ ++
Sbjct: 566 TPTLVEALRDRHVKSLSCGSNFTSSI 591


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 165/366 (45%), Gaps = 28/366 (7%)

Query: 193 WGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGW 247
           WG N   Q+ D      S P    LP++  I  + AGQ  +  + S G +L +G    G 
Sbjct: 65  WGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQ 124

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG   TT +  P  V L A     +V+   + H L VTS G V +WG+   G+L  G T 
Sbjct: 125 LGDGTTTPRSTPVAVDLPAGTTVTAVA-AGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTT 183

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
           +     +++    G  VT V+AG++HS A+T  G +  WG    G+LG G    R TP  
Sbjct: 184 TNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTTPRSTPVA 243

Query: 368 V---TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           V      +     +   SH+L ++  G T+ + G+   G+LG       +TP  ++    
Sbjct: 244 VDLPAGTTISTIAASSSSHSLAVTSTG-TMLAWGANFTGQLGDGTITNRSTPVAVDLPAG 302

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V  V  G+  S+A+T  G +  WG      LG   S+ S  TPV V   +   +  V+
Sbjct: 303 TTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLG-DGSTTSSSTPVAVDLPAGTTVTAVA 361

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PV--DQPSKVVGLEDVCVRQICAG 533
            G  H LAL+    + AWG NT GQ G    SN   P+  D P+      D  +  I  G
Sbjct: 362 GGAGHSLALTSTGTMLAWGFNTSGQLGDGTTSNRSTPIATDLPA------DTTITAIAGG 415

Query: 534 SLFSIA 539
           S  S+A
Sbjct: 416 SFHSLA 421



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 10/194 (5%)

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDG 391
           SAA    G    WG+    +LG G   +R TP  V   +D  + AV+ G+ H+L ++  G
Sbjct: 53  SAAAGPPGTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAG 112

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
            TV + G+ + G+LG   T   +TP  ++      V  V AG   S+A+T  G V  WGL
Sbjct: 113 -TVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGL 171

Query: 452 GLR------SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +       +++ +  TP++V   +   +  V+ G++H LAL+    V AWG+N+ GQ G
Sbjct: 172 NVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLG 231

Query: 506 QDNFSNPVDQPSKV 519
            D  + P   P  V
Sbjct: 232 -DGTTTPRSTPVAV 244



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 131/312 (41%), Gaps = 52/312 (16%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLT-------VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKL 314
           VPL  AIV L V+    A VL            G   +WG     +LG G T ++  P  
Sbjct: 28  VPLMVAIV-LGVTSVGAAPVLAQGVPSAAAGPPGTGLAWGDNAESQLGDGTTTNRSTPVT 86

Query: 315 IMGGLYG-KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV--TEL 371
           +   L     +T V+AG  HS AVT  G +  WG    G+LG G    R TP  V     
Sbjct: 87  VD--LPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAG 144

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL-GHEDTGKVTTPKVIEALRKFRVRKV 430
           + V AV+ G+ H+L ++  G TV + G    G+L     T   +TP V++      V  V
Sbjct: 145 TTVTAVAAGDRHSLAVTSTG-TVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAV 203

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG---- 480
            AG + S+ALT  G V  WG      LG   ++    TPV          VD+  G    
Sbjct: 204 AAGNAHSLALTSAGTVLAWGANSSGQLG-DGTTTPRSTPV---------AVDLPAGTTIS 253

Query: 481 ------DSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-----PVDQPSKVVGLEDVCVRQ 529
                  SH LA++    + AWG+N  GQ G    +N      VD P+         V  
Sbjct: 254 TIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAG------TTVTA 307

Query: 530 ICAGSLFSIAYT 541
           +  GS  S+A T
Sbjct: 308 VATGSGHSLAVT 319


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  128 bits (321), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 137/291 (47%), Gaps = 28/291 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGK--LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C + H   +T  G++YSWG G H    LGHGN  S   PK + G L G  V+ V+ G  H
Sbjct: 359 CGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWH 418

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL---- 387
           +A V   G L+T+G+G  G LGHGD +S   P  V  L    V  V+CG  HT  +    
Sbjct: 419 TAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVT 478

Query: 388 ---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
                    S  G  V++ G G  G+LGH D      P+ + +L    + +V  G S +V
Sbjct: 479 NEASEAEVDSSRGQ-VFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTV 537

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYN 491
           + T  G V+  G      LG  ++  +F  P  V G +    + +++ G  HV  L+  +
Sbjct: 538 SRTSRGHVYTMGSTAYGQLGNPTAKGNF--PERVEGDIVEASVEEIACGSYHVAVLTSKS 595

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           E+Y WG    GQ G  N  N   +P+ V  L +  V+ I  GS F+    V
Sbjct: 596 EIYTWGKGLNGQLGHGNVENK-REPAVVGFLREKQVKAITCGSNFTAVICV 645


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  128 bits (321), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 27/310 (8%)

Query: 217 LPSNIRHIEAGQFCTFLLD-------STGGLLVYGKGW-----LGLANTTIQPLPKRVPL 264
           LP+ +  ++A Q  + +         S   + VY  GW     LG  N++   +P+ +  
Sbjct: 57  LPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPI-- 114

Query: 265 EAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
             A+  L + +  C ++H L VT EGEV SWG  ++G+LG G T     P+ I     G 
Sbjct: 115 -RALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQT-FQGV 172

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT-ELSDVGAVSCGE 381
            +  V+AG  HS A+TE+G LY WG G +G LG GD   R  P  V+ +   +  V+CG 
Sbjct: 173 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGW 232

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            HT+ +S  G  +++ G    G+LGH D      P  ++A     + +V  G   ++ALT
Sbjct: 233 RHTISVSSSGE-LYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALT 291

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
             G ++ WG      +G+   ++   +PV V      ++  +S G  H +A+++ + VY+
Sbjct: 292 TGGQLYGWGWNKFGQVGV-GDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYS 350

Query: 496 WGSNTMGQCG 505
           WG  T GQ G
Sbjct: 351 WGRGTNGQLG 360



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 9/192 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           +RV  +SAG SHS A+    ++ +WG G+ G+LGHGD   R  PT ++ L    + +V C
Sbjct: 15  RRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVC 74

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HTL  S+    V+S G G+ G+LGH ++  +  P+ I AL+  R++++  G S  +A
Sbjct: 75  GADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLA 134

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T +G V  WG      LGL ++  S   P  +       I  V+ G  H +A+++  E+
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGTTEDSL-VPQKIQTFQGVPIKMVAAGAEHSVAITENGEL 193

Query: 494 YAWGSNTMGQCG 505
           Y WG    G  G
Sbjct: 194 YGWGWGRYGNLG 205



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 15/244 (6%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +V +WG N + Q+ L          ++Q+     I+ + AG   +  +   G L  YG 
Sbjct: 139 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGEL--YGW 196

Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           GW     LGL +   + +P++V ++   + L    C   H ++V+S GE+Y++G  ++G+
Sbjct: 197 GWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVA--CGWRHTISVSSSGELYTYGWSKYGQ 254

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LGHG+      P  +      K + QVS G  H+ A+T  G LY WG    G++G GD  
Sbjct: 255 LGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNV 313

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            R +P  V    D  V  +SCG  HT+ +++    V+S G G  G+LG  DT     PK+
Sbjct: 314 DRCSPVQVKFPHDQKVAQISCGWRHTIAVTEK-DNVYSWGRGTNGQLGIGDTIDWNYPKI 372

Query: 419 IEAL 422
           IEAL
Sbjct: 373 IEAL 376


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 32/333 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVG--EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G   +G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 391 CGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWH 450

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD KS   P  V  L  +  +  SCG  HT  + +  
Sbjct: 451 TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVM 510

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +    +V  G S +VAL
Sbjct: 511 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-ALVEHNFCQVACGHSLTVAL 569

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G L    + +++ G  HV  L+  NEVY 
Sbjct: 570 TTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYT 629

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTP 555
           WG    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S     
Sbjct: 630 WGKGANGRLGHGD-TDDRNNPTLVDALKDKHVKSIACGTNFTAAICL---HKWVSGVDQS 685

Query: 556 LCVDVRPHTFTLIREFLEQYSACFETGDYIPFC 588
           +C   R     L   F  +   C+  G  + FC
Sbjct: 686 MCSGCR-----LPFNFKRKRHNCYNCG--LVFC 711



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 155/329 (47%), Gaps = 33/329 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
             ++++WG     ++   V      P+L    SN  I  +  G++ T  +  +G L  +G
Sbjct: 350 QGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWG 409

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   + +S   C   H   VTS G+++++G G 
Sbjct: 410 NGAYNYGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFGDGT 467

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + S G  H+AAV E             G L+T
Sbjct: 468 FGALGHGDRKSVSLPREVE-SLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFT 526

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELS-DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           WG+GD GRLGHGD +++  PT V  +  +   V+CG S T+ L+  GH V++MGS   G+
Sbjct: 527 WGDGDKGRLGHGDKEAKLVPTCVALVEHNFCQVACGHSLTVALTTSGH-VYAMGSPVYGQ 585

Query: 405 LGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSI 458
           LG+ +  GK+ T    + L+ F V ++  G      LT    V+ WG G         + 
Sbjct: 586 LGNPQADGKLPTRVEGKLLKSF-VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTD 644

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             + P LV  L    +  ++ G +   A+
Sbjct: 645 DRNNPTLVDALKDKHVKSIACGTNFTAAI 673



 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 137/302 (45%), Gaps = 33/302 (10%)

Query: 258 LPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
            PK   LE+A+V L V    C   H   VT +GE++SWG    G+LGHG       PKLI
Sbjct: 322 FPK--ALESAVV-LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLI 378

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLVT---E 370
              L    +  V+ G  H+ AVT  G LYTWG G  ++G LGHG+  S   P  V    E
Sbjct: 379 -DALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLE 437

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              V  +SCG  HT V++  G  +++ G G  G LGH D   V+ P+ +E+L+  R  + 
Sbjct: 438 GIHVSYISCGPWHTAVVTSAGQ-LFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRA 496

Query: 431 CAGTSFSVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
             G   + A+               G +F WG G +         +   P  V  L  H 
Sbjct: 497 SCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA-LVEHN 555

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICA 532
              V+ G S  +AL+    VYA GS   GQ G       +  P++V G L    V +I  
Sbjct: 556 FCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL--PTRVEGKLLKSFVEEIAC 613

Query: 533 GS 534
           G+
Sbjct: 614 GA 615


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 158/314 (50%), Gaps = 27/314 (8%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSE 278
           HI  G   + ++  +G L  +G    G LGL +      P  V  L+   V+L    C  
Sbjct: 40  HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVA--CGR 97

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H +  T  G +YS+G G  G+LG G+      P+LI   L  ++   +SAG  HSAA+T
Sbjct: 98  SHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLI--NLPEQKYKLLSAGTDHSAALT 155

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG LY WG G  G+LG G+  S  TP  +   S V  VSCG  HT +++ DG  +++ G
Sbjct: 156 TDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGK-LYTFG 214

Query: 399 SGNLGKLG-----HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
               GKLG      EDT   TTPK +E++ + +++ V  G + +  ++  G ++ +G G+
Sbjct: 215 EKEFGKLGLTEDQLEDT---TTPKHVESITE-KIKLVACGGAHTAVISDVGNLYTFGDGM 270

Query: 454 RS------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-- 505
                   S +    P  V  LS H+   VS GD+H   +++   +Y +G    G+ G  
Sbjct: 271 HGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGIS 330

Query: 506 QDNFSNPVDQPSKV 519
           +++F N + +P KV
Sbjct: 331 EEDFCN-IFKPCKV 343



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 13/191 (6%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG 380
           +   +S G  HSA +TE G LYT+G  D G+LG G +K    P  V  L   G   V+CG
Sbjct: 37  KAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACG 96

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            SHT+V ++ G  ++S G+G+ G+LG  D    T+P++I  L + + + + AGT  S AL
Sbjct: 97  RSHTIVCTKAGR-LYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGTDHSAAL 154

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T DG ++ WG      LGL ++  S  TP  +   SS  +  VS G  H   ++   ++Y
Sbjct: 155 TTDGTLYMWGSGSEGQLGLGNTD-SVETPKELKFHSS--VSWVSCGYYHTAIVTDDGKLY 211

Query: 495 AWGSNTMGQCG 505
            +G    G+ G
Sbjct: 212 TFGEKEFGKLG 222



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 3/169 (1%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           +Y WG     Q+          P+     S++  +  G + T ++   G L  +G+   G
Sbjct: 160 LYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFG 219

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LGL    ++       +E+    + +  C  AH   ++  G +Y++G G HG+LG+G +
Sbjct: 220 KLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPS 279

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           L Q      +  L   +   VS G +H+A +TE G +YT+G+G HG+LG
Sbjct: 280 LLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 137/291 (47%), Gaps = 21/291 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A V+  +  C + H   VT  GE+Y+WG      G +GH N +S   PK +   L G R+
Sbjct: 339 AGVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRI 398

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGES 382
           + ++ G  H+A V+  G L+T+G+G  G LGHGD ++   P  V  L  +  V  +CG  
Sbjct: 399 SSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIW 458

Query: 383 HTLVL-----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           HT  +           S     +++ G G+  +LGH D  +   P  + AL  +  R+V 
Sbjct: 459 HTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVA 518

Query: 432 AGTSFSVALTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +VALT  G VF  G      L +       P +V G L+   + ++  G  HV A
Sbjct: 519 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAA 578

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           LS   E+Y WG    G+ G  +  +    P+ V  L D  V+ +  GS F+
Sbjct: 579 LSSKTEIYTWGKGANGRLGHGDVEDRT-APTLVEALRDKQVKTVACGSSFT 628



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 137/325 (42%), Gaps = 77/325 (23%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG     ++   +    S P+L Q+L   N   +  G F T  +  +G L  +G   
Sbjct: 310 VFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYTWGADA 369

Query: 246 ---GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              G +G +N     +PKR+  PLE   V +S   C   H   V+S G+++++G G  G 
Sbjct: 370 QSGGLVGHSNPVSHWMPKRMSSPLEG--VRISSIACGAWHTALVSSAGQLFTFGDGTFGV 427

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGE 348
           LGHG+  +   PK +   L G +  + + G  H+AAV E             G L+TWG+
Sbjct: 428 LGHGDKRNLAIPKEVES-LKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGD 486

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT------------- 393
           GD  RLGHGD + +  PT V  L D     V+CG S T+ L+  G               
Sbjct: 487 GDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGN 546

Query: 394 --------------------------------------VWSMGSGNLGKLGHEDTGKVTT 415
                                                 +++ G G  G+LGH D    T 
Sbjct: 547 PKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTA 606

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P ++EALR  +V+ V  G+SF+  +
Sbjct: 607 PTLVEALRDKQVKTVACGSSFTAVI 631


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 126/242 (52%), Gaps = 19/242 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLGL-ANTTIQ--PLPKRVPLEAAIVSLSVSKCS 277
           I +I  G   T ++D    L  +G G  GL  N  ++   +P+++ L+   V ++   C 
Sbjct: 23  IIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKFVQVA---CG 79

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAA 336
             H L +T  G ++SWG    G+LGHGN     +PK +I   +  +    +  G  HSA 
Sbjct: 80  ATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEY---IDCGDQHSAF 136

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV 394
           V+++  LYTWG G + RLGHG       P  V  L D  V  VSCG +HTL+++ +G  V
Sbjct: 137 VSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGF-V 195

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEAL-RKFRVRK----VCAGTSFSVALTWDGLVFW 448
           ++ G G  GKLG  ED    T P  +  + +KFR  K    V AG+  S+AL+ +G +F 
Sbjct: 196 YAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFT 255

Query: 449 WG 450
           WG
Sbjct: 256 WG 257



 Score =  110 bits (275), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 129/257 (50%), Gaps = 25/257 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H L +    ++YS+G+G+ G LG+ +    + P+ +      ++  QV+ G +HS 
Sbjct: 28  CGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN---LKQKFVQVACGATHSL 84

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHT 393
           A+T  G++++WG+   G+LGHG+      P  V + +D+ A  + CG+ H+  +S++   
Sbjct: 85  ALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-NDIIAEYIDCGDQHSAFVSKN-KE 142

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           +++ G+G   +LGH  T     PK +  L  + V  V  G + ++ +T +G V+ WG G+
Sbjct: 143 LYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGM 202

Query: 454 ----------RSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNEVYAWGSNTMG 502
                     ++ ++     ++      +++   V+ G  H LALS   +++ WGS+  G
Sbjct: 203 YGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSG 262

Query: 503 QCG-------QDNFSNP 512
             G       QD ++ P
Sbjct: 263 NLGIGYNKDIQDYYTQP 279



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 15/188 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYGKGW 247
           +++WG NL  Q+    +  C +P+ + + ++I   +I+ G   +  +     L  +G G 
Sbjct: 92  IFSWGKNLRGQLGHGNQNDCLKPK-EVIQNDIIAEYIDCGDQHSAFVSKNKELYTWGNGQ 150

Query: 248 ---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-- 302
              LG   TT + +PK+V +        VS C   H L VT EG VY+WG G +GKLG  
Sbjct: 151 YYRLGHGVTTDELIPKKVVVLEDYYVTHVS-CGMNHTLIVTGEGFVYAWGDGMYGKLGVS 209

Query: 303 ---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-- 357
                 TL  R   +       K   QV+AG  HS A++ +G ++TWG    G LG G  
Sbjct: 210 EDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSGNLGIGYN 269

Query: 358 -DLKSRHT 364
            D++  +T
Sbjct: 270 KDIQDYYT 277



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 138/347 (39%), Gaps = 64/347 (18%)

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVS------- 270
           PSNI   +A Q  +F L + G +   G    G+       + K++  +A   +       
Sbjct: 353 PSNIIFCQASQNNSFFLANNGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTD 412

Query: 271 -----------------LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR-P 312
                            +    CS  H + ++ +G+ Y WG   + +LG G + +    P
Sbjct: 413 LNDFNRPFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIP 472

Query: 313 KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT---PTLVT 369
           + + G L  K +   +     SA +T+ G ++T+G  D G LGH + K+ +    P +V 
Sbjct: 473 QKLQGILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQE-KNYYVVPEPKMVN 531

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--------------HEDTGKVTT 415
           ++  +  ++CG    + +S     +++ G+   G+LG               +  GK   
Sbjct: 532 DIPQMIYIACGPQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQN 591

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTG------- 468
            + I+   + +++ V  G   SVA+  +G ++  GL + S   +        G       
Sbjct: 592 NEQIKP-EEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFIL 650

Query: 469 -----LSSHQIVDVSIGDSHVLALS--------QYNEVYAWGSNTMG 502
                L + Q + VS  + H LALS            VYAWG   +G
Sbjct: 651 IRTNELQNQQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLG 697



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 20/235 (8%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS 378
           L  K +  ++ GH H+  + E+  LY++G G  G LG+  L+    P  +        V+
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKFVQVA 77

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFS 437
           CG +H+L L+  G  ++S G    G+LGH +      PK VI+         +  G   S
Sbjct: 78  CGATHSLALTISG-IIFSWGKNLRGQLGHGNQNDCLKPKEVIQ--NDIIAEYIDCGDQHS 134

Query: 438 VALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
             ++ +  ++ WG G         +     P  V  L  + +  VS G +H L ++    
Sbjct: 135 AFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGF 194

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR--------QICAGSLFSIA 539
           VYAWG    G+ G          P++ VG+  +C +        Q+ AGS+ S+A
Sbjct: 195 VYAWGDGMYGKLGVSEDCKTQTLPTR-VGM--ICKKFRKNKMYYQVAAGSMHSLA 246



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 14/172 (8%)

Query: 370 ELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
           EL D  +  ++CG  HTL++ ++   ++S G G  G LG+E    V  P+ +   +KF  
Sbjct: 17  ELQDKEIIYIACGHHHTLIIDENNQ-LYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKFV- 74

Query: 428 RKVCAGTSFSVALTWDGLVFWWGLGLR------SSSISFHTPVLVTGLSSHQIVDVSIGD 481
            +V  G + S+ALT  G++F WG  LR      + +       ++      + +D   GD
Sbjct: 75  -QVACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEYIDC--GD 131

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            H   +S+  E+Y WG+    + G    ++ +  P KVV LED  V  +  G
Sbjct: 132 QHSAFVSKNKELYTWGNGQYYRLGHGVTTDELI-PKKVVVLEDYYVTHVSCG 182



 Score = 48.1 bits (113), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 44/230 (19%), Positives = 89/230 (38%), Gaps = 65/230 (28%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTL---VTELSDVGAVSCGES 382
           +S  + H+ A+++ G  Y WG+  + +LG G      + P     + E   +   +C + 
Sbjct: 433 ISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDK 492

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            + +L+  G  VW+ G+ + G LGH++      P+                         
Sbjct: 493 FSALLTDKGE-VWTFGTSDCGVLGHQEKNYYVVPE------------------------- 526

Query: 443 DGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN-EVYAWGSNTM 501
                               P +V  +   Q++ ++ G   ++++S +  ++YAWG+N  
Sbjct: 527 --------------------PKMVNDIP--QMIYIACGPQGMVSISAHKRQLYAWGNNIY 564

Query: 502 GQCG------------QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           GQ G             D   N   Q ++ +  E+V ++ +  G   S+A
Sbjct: 565 GQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIKSVDMGMFHSVA 614


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  127 bits (320), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 137/291 (47%), Gaps = 21/291 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A V+  +  C + H   VT  GE+Y+WG      G +GH N +S   PK +   L G R+
Sbjct: 330 AGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRI 389

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGES 382
           + ++ G  H+A V+  G L+T+G+G  G LGHGD ++   P  V  L  +  V  +CG  
Sbjct: 390 SSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIW 449

Query: 383 HTLVL-----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           HT  +           S     +++ G G+  +LGH D  +   P  + AL  +  R+V 
Sbjct: 450 HTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVA 509

Query: 432 AGTSFSVALTWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLA 486
            G S +VALT  G VF  G      L +       P +V G L+   + ++  G  HV A
Sbjct: 510 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAA 569

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           LS   E+Y WG    G+ G  +  +    P+ V  L D  V+ +  GS F+
Sbjct: 570 LSSKTEIYTWGKGANGRLGHGDVEDRT-APTLVEALRDKQVKTVACGSSFT 619



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 137/325 (42%), Gaps = 77/325 (23%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG     ++   +    S P+L Q+L   N   +  G F T  +  +G L  +G   
Sbjct: 301 VFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADA 360

Query: 246 ---GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              G +G +N     +PKR+  PLE   V +S   C   H   V+S G+++++G G  G 
Sbjct: 361 QSGGLVGHSNPVSHWMPKRMSSPLEG--VRISSIACGAWHTALVSSAGQLFTFGDGTFGV 418

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYTWGE 348
           LGHG+  +   PK +   L G +  + + G  H+AAV E             G L+TWG+
Sbjct: 419 LGHGDKRNLAIPKEVES-LKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGD 477

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHT------------- 393
           GD  RLGHGD + +  PT V  L D     V+CG S T+ L+  G               
Sbjct: 478 GDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGN 537

Query: 394 --------------------------------------VWSMGSGNLGKLGHEDTGKVTT 415
                                                 +++ G G  G+LGH D    T 
Sbjct: 538 PKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTA 597

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P ++EALR  +V+ V  G+SF+  +
Sbjct: 598 PTLVEALRDKQVKTVACGSSFTAVI 622


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  127 bits (320), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 25/289 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H L +  +G VY+ G    G+LGH    +   P+L+ G L  +++T VS G +HS 
Sbjct: 40  CGGQHTLFLLQDGSVYTCGSNSCGQLGHDK--AGNSPELV-GALDTQKITMVSCGRAHSV 96

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHT----PTLVTELSD--VGAVSCGESHTLVLSQ 389
           AV E G ++ WG GD G+LG   L++  T    P L+ +L D  +  V CG  H + LS+
Sbjct: 97  AVNEQGQVFVWGAGDGGQLG---LETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSR 153

Query: 390 DGHT-VWSMG-SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           DG    W    SG LG LG  +T K+ +P  +++L    + ++ AG     AL+  G VF
Sbjct: 154 DGQLFTWGQNSSGQLG-LGKGETSKL-SPSPVKSLAGIPLAQITAGGDHCFALSLSGAVF 211

Query: 448 WWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            WG      LGL         P  +  L S ++V +S GD H  AL++   ++ +G  + 
Sbjct: 212 GWGKNKAGQLGLNDKQ-DRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSR 270

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
           GQ G  + +N +  P +V+ L    V QI  G   ++A+ VP S +  +
Sbjct: 271 GQLGHGSSNNEL-LPRRVMELMGTEVSQITCGRHHTLAF-VPSSGTVYA 317



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 10/244 (4%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +++  C  AH + V  +G+V+ WG G+ G+LG     +  R   ++  L    ++QV  G
Sbjct: 85  ITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCG 144

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDV--GAVSCGESHTLVL 387
           + H  A++ DG L+TWG+   G+LG G  + S+ +P+ V  L+ +    ++ G  H   L
Sbjct: 145 NQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFAL 204

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           S  G  V+  G    G+LG  D      P  I+ LR  RV  +  G   + ALT  G +F
Sbjct: 205 SLSG-AVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLF 263

Query: 448 WWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTM 501
            +G G R      SS +   P  V  L   ++  ++ G  H LA       VYA+G N+ 
Sbjct: 264 TFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSH 323

Query: 502 GQCG 505
           GQ G
Sbjct: 324 GQLG 327



 Score =  104 bits (259), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 18/228 (7%)

Query: 293 WGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           WG    G+LG    GN + + R   I     G+ + +V+ G  H+  + +DG +YT G  
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPR---ICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 350 DHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
             G+LGH   K+ ++P LV  L    +  VSCG +H++ +++ G  V+  G+G+ G+LG 
Sbjct: 61  SCGQLGHD--KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQ-VFVWGAGDGGQLGL 117

Query: 408 EDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           E     V  P++++ L    + +V  G    +AL+ DG +F WG      LGL     S 
Sbjct: 118 ETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSK 177

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
            +P  V  L+   +  ++ G  H  ALS    V+ WG N  GQ G ++
Sbjct: 178 LSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLND 225



 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 12/197 (6%)

Query: 346 WGEGDHGRLGHG-DLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNL 402
           WG    G+LG G +      P +    S  G   V+CG  HTL L QDG +V++ GS + 
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDG-SVYTCGSNSC 62

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G+LGH+  G   +P+++ AL   ++  V  G + SVA+   G VF WG      LGL ++
Sbjct: 63  GQLGHDKAG--NSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETA 120

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             +   P L+  L  H I  V  G+ H +ALS+  +++ WG N+ GQ G          P
Sbjct: 121 ETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSP 180

Query: 517 SKVVGLEDVCVRQICAG 533
           S V  L  + + QI AG
Sbjct: 181 SPVKSLAGIPLAQITAG 197



 Score = 91.3 bits (225), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 7/267 (2%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           VYT G N   Q+  +  G             I  +  G+  +  ++  G + V+G G  G
Sbjct: 54  VYTCGSNSCGQLGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGG 113

Query: 250 LANTTIQPLPKRVP-LEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
                      R+P L   +   S+S+  C   H + ++ +G++++WG    G+LG G  
Sbjct: 114 QLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKG 173

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            + +     +  L G  + Q++AG  H  A++  G ++ WG+   G+LG  D + R  P 
Sbjct: 174 ETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPC 233

Query: 367 LVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
            +  L    V  +SCG+ HT  L++ G  +++ G G+ G+LGH  +     P+ +  L  
Sbjct: 234 HIKFLRSQRVVYISCGDEHTAALTKSG-GLFTFGDGSRGQLGHGSSNNELLPRRVMELMG 292

Query: 425 FRVRKVCAGTSFSVALT-WDGLVFWWG 450
             V ++  G   ++A     G V+ +G
Sbjct: 293 TEVSQITCGRHHTLAFVPSSGTVYAFG 319



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 18/188 (9%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSR------PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           +++TWG N   Q L   +G+ S+        L  +P  +  I AG    F L  +G +  
Sbjct: 156 QLFTWGQNSSGQ-LGLGKGETSKLSPSPVKSLAGIP--LAQITAGGDHCFALSLSGAVFG 212

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +GK   G LGL +   + +P  +    +   + +S C + H   +T  G ++++G G  G
Sbjct: 213 WGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYIS-CGDEHTAALTKSGGLFTFGDGSRG 271

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA-VTEDGLLYTWGEGDHGRLGHG- 357
           +LGHG++ ++  P+ +M  L G  V+Q++ G  H+ A V   G +Y +G   HG+LG G 
Sbjct: 272 QLGHGSSNNELLPRRVME-LMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGI 330

Query: 358 --DLKSRH 363
             DL+S H
Sbjct: 331 LADLRSPH 338


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 148/280 (52%), Gaps = 17/280 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGHG      +P+ I G L  + +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHGR--EGNKPEQI-GALADQHIVHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  +D     +P+ + +L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NNAGQLGL-SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 153/332 (46%), Gaps = 21/332 (6%)

Query: 205 VRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLP 259
           ++G  + P++    S+  ++ +  G   +  L   G +   G   KG LG      +P  
Sbjct: 18  LQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKPEQ 77

Query: 260 KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGG 318
                +  IV ++   C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   
Sbjct: 78  IGALADQHIVHVA---CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK- 133

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--G 375
           L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G D  S+ +P  V  L  +   
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLA 193

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  +  G  
Sbjct: 194 QVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEE 252

Query: 436 FSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQ 489
            +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA    
Sbjct: 253 HTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPS 312

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
              +YA+G    GQ G  +  N V  PS V G
Sbjct: 313 SGLIYAFGCGARGQLGTGHTCN-VKCPSPVKG 343



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 109/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGHG  +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHG--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGH   G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHGREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 78.2 bits (191), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  +   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 46.2 bits (108), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 161/378 (42%), Gaps = 69/378 (18%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+TWG N   Q+ D      + P         R + +    +  L   G +L +G    G
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSG 347

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +T  +  P  VP  +A+ ++        H L +  +G +++WG G  G+LGHG +
Sbjct: 348 QLGDGDTADRSTPSLVPELSAVTAV---VGGAQHALALRKDGTLWAWGGGLAGQLGHGGS 404

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT-- 364
                P  +MG L    VT ++ G  HS A  EDG ++ WG   +G+LG G +  RH   
Sbjct: 405 ERHVVPATVMG-L--TNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPV 461

Query: 365 ------------------------------------------------PTLVTELSDVGA 376
                                                           P  V+ L+ V A
Sbjct: 462 RVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLA 521

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           ++ G SH L L  DG  VW+ G   LG+LG   +G   TP  +  L    ++ V AGT F
Sbjct: 522 IAAGGSHVLALRSDGD-VWAWGYNALGQLGDGTSGDKLTPVRVPGLAP--IQSVAAGTYF 578

Query: 437 SVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           S+AL  DG V+ WG G          +   +PV V GLS   I ++S+G +H LA+    
Sbjct: 579 SMALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLS--DIRNISVGSAHALAVRGDG 636

Query: 492 EVYAWGSNTMGQCGQDNF 509
            V+AWG N  GQ G  ++
Sbjct: 637 TVWAWGDNNEGQLGDGSW 654



 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 187/461 (40%), Gaps = 120/461 (26%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+TWG N   Q+ D      + P+     +++  + AG F + +L S G +  +G 
Sbjct: 134 ADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGT 193

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG  +T     PK VP    +V+L+         L V ++G V SWG    G+LG
Sbjct: 194 NFHGQLGQGHTQTGLWPKPVPGLEGVVALA---AGFDFTLAVHADGAVSSWGANSFGQLG 250

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD------------ 350
            G T +QR     +  L G  +T V+AG  H+ A+ +DG ++TWG               
Sbjct: 251 LG-TFTQRLSPERIPTLSG--ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDR 307

Query: 351 --------------------------------------HGRLGHGDLKSRHTPTLVTELS 372
                                                  G+LG GD   R TP+LV ELS
Sbjct: 308 AVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPELS 367

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF------- 425
            V AV  G  H L L +DG T+W+ G G  G+LGH  + +   P  +  L          
Sbjct: 368 AVTAVVGGAQHALALRKDG-TLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGS 426

Query: 426 -----------------------------------------RVRKVCAGTSFSVALTWDG 444
                                                     VR V A    S+A+  DG
Sbjct: 427 FHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDG 486

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            V+ WG      LG   ++     PV V+GL+S  ++ ++ G SHVLAL    +V+AWG 
Sbjct: 487 TVWTWGRNAAGQLG-DGTTRDRARPVAVSGLTS--VLAIAAGGSHVLALRSDGDVWAWGY 543

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           N +GQ G D  S     P +V GL    ++ + AG+ FS+A
Sbjct: 544 NALGQLG-DGTSGDKLTPVRVPGL--APIQSVAAGTYFSMA 581



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 162/362 (44%), Gaps = 25/362 (6%)

Query: 190  VYTWGCNLHHQILDEV-RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
            V+TWG N   Q+ D     + +  R++ L   I  +  G   +  L S G +  +G    
Sbjct: 838  VWTWGENQRGQLGDGTTSARVAPGRVEGL-EGIVAVAGGGDTSLALRSDGTVWAWGANAS 896

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            G +G      +  P+R+    A+  + V    E+H L V  +G V++WG    G+LG G 
Sbjct: 897  GQVGDGTVEDRLTPRRIE---ALSDVMVIALGESHALAVGEDGTVWAWGANASGQLGDGG 953

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
                  P  + G L G  V  V+AG + S AV +DG  + WG  + G+LG G  +SR  P
Sbjct: 954  ETPSLLPARVKG-LEG--VGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVP 1010

Query: 366  TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRK 424
              V  +  + AVS G  H + L +DG  VW+ G   LG+LG   +   V  P+ +  L  
Sbjct: 1011 HRVASVKGLRAVSAGAHHAMALGEDG-AVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSD 1069

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH-TPVLVTGLSSHQIVDV 477
              V  V AG  FSVA+  DG  F WG      LG   +        V + G  +  +V V
Sbjct: 1070 --VESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTV 1127

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
                 H +AL     + AWG N  GQ G D  +     P ++ G+  V    +  G+  S
Sbjct: 1128 GAWGQHAVALMADGTLQAWGDNATGQLG-DGTTTRRSSPGEIRGVTRVTA--VSTGAWHS 1184

Query: 538  IA 539
            +A
Sbjct: 1185 LA 1186



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 172/367 (46%), Gaps = 27/367 (7%)

Query: 183 ISVA-HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
           I+VA    V+TWG N   Q+ D      +RP   S  +++  I AG      L S G + 
Sbjct: 480 IAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRSDGDVW 539

Query: 242 VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G    G LG   +  +  P RVP  A I S++         + + ++G V++WG G  
Sbjct: 540 AWGYNALGQLGDGTSGDKLTPVRVPGLAPIQSVAAGTYFS---MALANDGTVWTWGEGFE 596

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LG G  + QR   + + GL    +  +S G +H+ AV  DG ++ WG+ + G+LG G 
Sbjct: 597 GQLGDGGGV-QRLSPVAVKGL--SDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGS 653

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
              R  P  V  L+ + AVS G SH+L L  DG TV + GS   G+LG         P V
Sbjct: 654 WMDRFAPVQVRNLTGITAVSGGRSHSLALHADG-TVRAWGSNGYGQLGDGTLTSRVLPSV 712

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I  L    ++ +  G    +AL  D  +  WG      LGL ++  S   PV V G+   
Sbjct: 713 IPGLSG--IQALHPGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSAR-PVQVRGIG-- 767

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV-CVRQIC 531
           ++  ++ G +H L +     V AWG+N  GQ G    ++     ++ V +  V C R + 
Sbjct: 768 RVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTH----GARAVTVRGVSCARSVA 823

Query: 532 AGSLFSI 538
           +G   S+
Sbjct: 824 SGGQHSL 830



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 169/417 (40%), Gaps = 81/417 (19%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
            A   V  WG N + Q+ D        P +    S I+ +  G      L +   L  +G 
Sbjct: 684  ADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGY 743

Query: 246  ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
               G LGL        P +V     +  L+  +   AH L V ++G V +WG    G+LG
Sbjct: 744  NRFGQLGLGAAGWSARPVQVRGIGRVERLAAGR---AHALLVRADGSVVAWGANASGQLG 800

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL-------- 354
             G T    R   + G    +    V++G  HS  +  DG ++TWGE   G+L        
Sbjct: 801  DGGTTHGARAVTVRGVSCAR---SVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSAR 857

Query: 355  ------------------------------------------GHGDLKSRHTPTLVTELS 372
                                                      G G ++ R TP  +  LS
Sbjct: 858  VAPGRVEGLEGIVAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALS 917

Query: 373  DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF--RVRKV 430
            DV  ++ GESH L + +DG TVW+ G+   G+LG  D G+  TP ++ A  K    V  V
Sbjct: 918  DVMVIALGESHALAVGEDG-TVWAWGANASGQLG--DGGE--TPSLLPARVKGLEGVGSV 972

Query: 431  CAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
             AG +FS+A+  DG  + WG         G   S    H    V GL +     VS G  
Sbjct: 973  AAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVPHRVASVKGLRA-----VSAGAH 1027

Query: 483  HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            H +AL +   V+AWG NT+GQ G    +  V  P +V  L D  V  + AG  FS+A
Sbjct: 1028 HAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSD--VESVAAGEQFSVA 1082



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 131/263 (49%), Gaps = 16/263 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +T  G V++WG    G+LG  +T  QR     +  L  + +  V +G +HS A+  
Sbjct: 77  HSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL--EDIVSVVSGDAHSLALGA 134

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++TWG    G+LG G    R  P  V   +DV AV+ G+ H+LVL  DG TVW+ G+
Sbjct: 135 DGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVLKSDG-TVWAWGT 193

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   T     PK +  L    V  + AG  F++A+  DG V  WG      LGL
Sbjct: 194 NFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDFTLAVHADGAVSSWGANSFGQLGL 251

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
            + +    +P  +  LS   I  V+ G  H +AL +   V+ WGSN+ GQ G D   N  
Sbjct: 252 GTFTQRL-SPERIPTLSG--ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLG-DGTWNDR 307

Query: 514 DQPSKVVGLEDV-CVRQICAGSL 535
             P+ + G+     V  + AGSL
Sbjct: 308 AVPAPLPGVGGARAVASLDAGSL 330



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 22/298 (7%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEA 279
           I AG   +  L  TG +  +G    G LG A+T+ Q L P R+P+   IVS+      +A
Sbjct: 71  IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVSV---VSGDA 127

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + ++G V++WG    G+LG G T  +  P+ + G      V  V+AG  HS  +  
Sbjct: 128 HSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEG---FTDVVAVAAGDFHSLVLKS 184

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   HG+LG G  ++   P  V  L  V A++ G   TL +  DG  V S G+
Sbjct: 185 DGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADG-AVSSWGA 243

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSIS 459
            + G+LG     +  +P+ I  L    +  V AGT  +VAL  DG V+ WG    S  + 
Sbjct: 244 NSFGQLGLGTFTQRLSPERIPTLSG--ITSVAAGTYHAVALGKDGTVWTWGSN-SSGQLG 300

Query: 460 FHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             T      P  + G+   + V  S+ D+  LAL +  +V AWG+N  GQ G  + ++
Sbjct: 301 DGTWNDRAVPAPLPGVGGARAV-ASL-DAGSLALLEGGDVLAWGANNSGQLGDGDTAD 356



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 171/383 (44%), Gaps = 47/383 (12%)

Query: 183  ISVAH-SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA---------GQFCTF 232
            ++VAH    ++WG N + Q+ D   G    PRL      I   +A         GQ    
Sbjct: 1081 VAVAHDGTAFSWGSNEYGQLGDGKTG----PRLSPAEVKIGGSKARTVVTVGAWGQHAVA 1136

Query: 233  LLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE 289
            L+ + G L  +G    G LG   TT +  P  +     + ++S       H L +  +G 
Sbjct: 1137 LM-ADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAW---HSLALRLDGT 1192

Query: 290  VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            V++WG    G+LG G T ++  P  + G L  + V  ++AG  HS AV  DG ++TWG  
Sbjct: 1193 VWAWGANGFGQLGDGTTTARAVPVPVQG-L--RDVVAIAAGGYHSVAVRSDGTVWTWGYN 1249

Query: 350  DHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
              G+LG G  +SR  P  V +L  V AV+ G+ H+L L  DG TV   G    G+LG   
Sbjct: 1250 TFGQLGDGTSESRALPVQVHKLEGVQAVTGGDHHSLALHADG-TVSGWGHNASGQLGDGS 1308

Query: 410  TGKVTTP---KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
                 TP   K ++ L + R     AG + +VAL  DG V+ WG      LG   +    
Sbjct: 1309 RTDRYTPVRLKDVDGLTEVR-----AGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRM 1363

Query: 461  H-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSNPVDQPSK 518
               P  V+GL +     +  G  H  A       + WG N+ GQ G  DN   P  +P +
Sbjct: 1364 RLVPKPVSGLPA--ATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNA--PRAEPQR 1419

Query: 519  VVGLEDVCVRQICAGSLFSIAYT 541
            +  L  + V  I  G+  S+A T
Sbjct: 1420 MKLLSGLKV--IAGGADTSLAMT 1440



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 148/341 (43%), Gaps = 41/341 (12%)

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
            +A   +  WG N   Q+ D    + S P      + +  +  G + +  L   G +  +G
Sbjct: 1138 MADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDGTVWAWG 1197

Query: 245  K---GWLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
                G LG   TT + +P  VP++    +V+++       H + V S+G V++WG    G
Sbjct: 1198 ANGFGQLGDGTTTARAVP--VPVQGLRDVVAIAAGGY---HSVAVRSDGTVWTWGYNTFG 1252

Query: 300  KLGHGNTLSQRRP----KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            +LG G + S+  P    KL       + V  V+ G  HS A+  DG +  WG    G+LG
Sbjct: 1253 QLGDGTSESRALPVQVHKL-------EGVQAVTGGDHHSLALHADGTVSGWGHNASGQLG 1305

Query: 356  HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT- 414
             G    R+TP  + ++  +  V  G +HT+ L +DG TVW+ G    G+LG   TG    
Sbjct: 1306 DGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDG-TVWTWGDNAHGQLGDGVTGPRMR 1364

Query: 415  -TPKVIEALRKFRVRKVCAGTSFSV-----ALTWD----GLVFWWGLGLRSSSISFHTPV 464
              PK +  L         A  SF+      A TW     G +   G+G  +         
Sbjct: 1365 LVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQL---GVGDNAPRAEPQRMK 1421

Query: 465  LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            L++GL       ++ G    LA++Q   + +WGS+  G  G
Sbjct: 1422 LLSGLKV-----IAGGADTSLAMTQEGVLMSWGSSLHGTLG 1457



 Score = 67.8 bits (164), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 12/235 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
            V+TWG N   Q+ D      + P        ++ +  G   +  L + G +  +G    G
Sbjct: 1243 VWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVTGGDHHSLALHADGTVSGWGHNASG 1302

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             LG  + T +  P R+     +  L+  +   AH + +  +G V++WG   HG+LG G T
Sbjct: 1303 QLGDGSRTDRYTPVRLK---DVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVT 1359

Query: 307  LSQRR--PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
              + R  PK + G L     T + AG  HS A   +   +TWG   HG+LG GD   R  
Sbjct: 1360 GPRMRLVPKPVSG-L--PAATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAE 1416

Query: 365  PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            P  +  LS +  ++ G   +L ++Q+G  + S GS   G LG    G+  +P  +
Sbjct: 1417 PQRMKLLSGLKVIAGGADTSLAMTQEG-VLMSWGSSLHGTLGLGVLGQRASPGRV 1470


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 39/361 (10%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGL 240
           I   H+ V+++G N   ++      +   P R++ LP   +  + +G   + L+   G L
Sbjct: 79  IKKYHAYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKL 138

Query: 241 LVYGKGW---LGLANTTIQPLPKRVPLEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
            + G      LGL   T        P+E    + +    C + H L ++ EG+VY WG  
Sbjct: 139 WMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGS 198

Query: 297 EHGKLGHGNTLSQRRPK---LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            H K G  +   +   K   +++    GK++ Q+  G  HS A+ ++G LY+WG G+ G 
Sbjct: 199 LHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGE 258

Query: 354 LGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            GHG  + + TP  +       +  +  G  HTL ++ D + V++ G G  G+ G  +  
Sbjct: 259 CGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITAD-NQVYAWGDGRYGQCGFGEFE 317

Query: 412 KVTTPKVI------------------EALRKF----RVRKVCAGTSFSVALTWDGLVFWW 449
               P+++                  E L  F    +++++ AG   ++ LT  G +F +
Sbjct: 318 NTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSF 377

Query: 450 GLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
           G   +     ++  ++  P LV G+ +H+ V V+ G +H L L+  N+VYA G+N  GQC
Sbjct: 378 GYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQC 437

Query: 505 G 505
           G
Sbjct: 438 G 438



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 19/237 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V+S+G    G+LG G+      P+ + G L   +V  +S+G  HS  VTEDG L+  G  
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRG-LPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 350 DHGRLG-----HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
            H +LG      G  K+     L+T++  +  V+CG+ HTL LS++G  V+  G     K
Sbjct: 145 LHDKLGLEGITTGSKKTFKPVELLTQIF-IKQVACGDYHTLALSKEGQ-VYVWGGSLHNK 202

Query: 405 LG-----HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS-- 457
            G      +D  K   P ++++    +++++  G   S+AL  +G ++ WG+G +     
Sbjct: 203 RGDRSQERKDNAKYK-PVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 458 ---ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
                  TP  +       I  +  G+ H LA++  N+VYAWG    GQCG   F N
Sbjct: 262 GKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFEN 318



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 47/235 (20%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRL--QSLPSNIR--------HIEAGQFCTFLLDSTGG 239
           +Y+WG           +G+C   +   Q  P  I+         IEAG   T  + +   
Sbjct: 248 LYSWGVG--------EKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQ 299

Query: 240 LLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSL---SVSK--------------- 275
           +  +G G  G        NT I P     P +    S    SV +               
Sbjct: 300 VYAWGDGRYGQCGFGEFENTAI-PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQI 358

Query: 276 -CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
              E H L +TS G+++S+G  + G+LGH    +  RPKL+ G L  K V QV+AG +HS
Sbjct: 359 AAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTV-QVAAGRNHS 417

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVL 387
             +T    +Y  G   +G+ G  D + R T + V  L  V +     G  H+ V+
Sbjct: 418 LCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSVNSFKLYAGGFHSWVV 472



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 16/159 (10%)

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           VWS G    G+LG     +V  P+ +  L K +V  + +G   S  +T DG ++  G   
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145

Query: 451 ---LGLRS----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS---NT 500
              LGL      S  +F    L+T +    I  V+ GD H LALS+  +VY WG    N 
Sbjct: 146 HDKLGLEGITTGSKKTFKPVELLTQIF---IKQVACGDYHTLALSKEGQVYVWGGSLHNK 202

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            G   Q+   N   +P  +       ++QI  G   S+A
Sbjct: 203 RGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLA 241


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 170/372 (45%), Gaps = 22/372 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D    +   P   S    +  + AG +    L S G +  +G    G
Sbjct: 220 VWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAVTAGLYHALALRSDGTVWAWGSNSSG 279

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            +G    T +P P +V    +I         +A  L +  +G V++WG+   G+LG G T
Sbjct: 280 QMGDGTWTDRPSPVQV---TSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTT 336

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                P  + G   G  VT ++AG  H+  +  DG L+TWG G  G+LGHG  +   +P 
Sbjct: 337 ADSPLPVRVRG--LGA-VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE 393

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           +VT LS+V +V+ G  H++    DG +VW+ G    G+LG   T +   P  +  L    
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDG-SVWTWGRNTNGQLGDGTTTERHLPVRVPGLSG-- 450

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGD 481
           V  V A    S AL  DG V+ WG   +      ++    +P  V GLSS  +  ++ G 
Sbjct: 451 VVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEGLSS--VKALASGG 508

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           SH++AL     V+ WG N  GQ G D  +     P +V GL  V    + AG+ FS+A  
Sbjct: 509 SHMVALRTDGTVWTWGYNGAGQLG-DGTTTDRRAPVQVTGLSGVT--SVAAGAYFSLALR 565

Query: 542 VPPSNSALSSAF 553
              +  A    F
Sbjct: 566 TDGTVWAWGDGF 577



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 186/368 (50%), Gaps = 37/368 (10%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTF-------LLDSTGGLL 241
            +  +WG + + Q+ D   G    P    LPS+   + A     +       L D T  + 
Sbjct: 1069 RALSWGSHEYGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGT--VQ 1126

Query: 242  VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
             +G    G LG   T  +  P  V    A+V+++    +  H L + S+G V++WG    
Sbjct: 1127 TWGGNADGQLGDGTTESRATPITVAGLGAMVAVA---PAARHTLALRSDGTVWAWGDNTF 1183

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G+LG G+   +  P  ++G L  ++VT ++AG  HS AV EDG ++ WG    G+LG G 
Sbjct: 1184 GQLGDGSNTRRTLPVQVVG-L--EKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGT 1240

Query: 359  LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED-TGKVTTPK 417
            + +R  PT +  L    AV+ GE H+L+L  DG T+W+ G+ + G+LG    T +++  +
Sbjct: 1241 MDARAVPTRMLGLDGAVAVAGGEYHSLMLRFDG-TLWATGNNSHGQLGEGTFTNRLSPFQ 1299

Query: 418  VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
            V+E     +VR V AG   SVAL  DG V+ WG      LG   +  +   P  V GL++
Sbjct: 1300 VVE---LDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLG-DGTVTTRRVPAPVPGLTA 1355

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
              I  V  G SH  A+   +E +AWG N+ GQ G  + S+ + +P+ V GL    V+ + 
Sbjct: 1356 --IASVGAGTSHTFAVG--SETWAWGRNSHGQLGTGDSSDRL-EPTLVKGLH--GVKSVL 1408

Query: 532  AGSLFSIA 539
            AG  FS+A
Sbjct: 1409 AGGDFSVA 1416



 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 172/401 (42%), Gaps = 76/401 (18%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVY 243
           A   V+TWG N   Q+ D       RP  Q +P  S++  + AG+F +  L + G +  +
Sbjct: 116 ADRTVWTWGGNNAGQVGDGT--NVDRPTPQKVPGLSDVVAVAAGEFHSLALRADGTVWAW 173

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G LG  ++   P P +V     +V+L+         L V S+G V++WG    G+
Sbjct: 174 GSNFYGQLGRGHSQPGPSPAQVVGLTGVVALA---AGFDFSLAVRSDGTVWAWGANGSGQ 230

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G  + +  P  +   L G  V+ V+AG  H+ A+  DG ++ WG    G++G G   
Sbjct: 231 LGDGTYIQRLAPTQVS-QLQG--VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWT 287

Query: 361 SRHTPTLVTELSDVGAV------------------------------------------- 377
            R +P  VT ++   AV                                           
Sbjct: 288 DRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRG 347

Query: 378 -------SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
                  + G  H +VL  DG T+W+ G G  G+LGH  + ++ +P+V+  L    V  V
Sbjct: 348 LGAVTSLAAGTQHAVVLRADG-TLWTWGHGATGQLGHGSSERMLSPEVVTRLSN--VASV 404

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
            +G+  SVA   DG V+ WG      LG   ++   H PV V GLS   +V VS    H 
Sbjct: 405 ASGSFHSVAALSDGSVWTWGRNTNGQLG-DGTTTERHLPVRVPGLSG--VVSVSASGHHS 461

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
            AL     V+ WG N  GQ G D  +     P++V GL  V
Sbjct: 462 FALRSDGTVWGWGRNAQGQMG-DGTTKDRASPARVEGLSSV 501



 Score =  120 bits (300), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 159/364 (43%), Gaps = 34/364 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D       R       + +  +  G + +  L   G L  +G    G
Sbjct: 620 VWAWGDNTEGQMGDGSWSDRFRAVQVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYG 679

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             G    T + +   VP  + I  L  S     HVL V  +G + +WG    G+LG G  
Sbjct: 680 QFGDGGVTPRVVAGAVPGLSGIKLLGASYL---HVLAVREDGMLLTWGYNRFGQLGLGAA 736

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                P  + G   G+R+   SAG +HS  V  DG +  WG+   G+LG G    R +P 
Sbjct: 737 GWSSLPVQVRGLGQGRRL---SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPV 793

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           L   L    A S G  H+LVL+ DG TVWS G  + G+LG         P  +E L  + 
Sbjct: 794 LARNLPCARAASAGRQHSLVLACDG-TVWSWGGNSQGQLGDGGVTSRAYPAKVEGL--WG 850

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG-----------LGLRSSSISFHTPVLVTGLSSHQIV 475
           V  V AG   S+ L  DG V+ WG           LG R+S      P+ V GL+   I 
Sbjct: 851 VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRAS------PLEVKGLAG--IA 902

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
              +G++H L +SQ   V+AWG+N  GQ G D  +     P +V GL       +  G  
Sbjct: 903 TGVMGEAHALVVSQDGTVWAWGANGRGQLG-DGTTTSSASPVRVAGLS--AAMNVSVGQA 959

Query: 536 FSIA 539
           +S+A
Sbjct: 960 YSLA 963



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 169/367 (46%), Gaps = 27/367 (7%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY-- 243
            A   V+TWG N   Q+ D   G  + P      + I     G+    ++   G +  +  
Sbjct: 866  ADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGA 925

Query: 244  -GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G+G LG   TT    P RV   +A +++SV    +A+ L V  +G V+SWG  + G+LG
Sbjct: 926  NGRGQLGDGTTTSSASPVRVAGLSAAMNVSV---GQAYSLAVLPDGTVWSWGANDSGQLG 982

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
             G  +++  PK +        V  V+AG  H  AV  DG ++ WG    G++G G    R
Sbjct: 983  DGTNVARTTPKPVQ---DLADVKAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTHFWR 1039

Query: 363  HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
              P  V  L +    S GE H+L L  D   + S GS   G+LG  ++G    P  ++ L
Sbjct: 1040 FRPVRVEGLLNAVETSAGEQHSLALLGDERAL-SWGSHEYGQLGDAESGPSLEPVGVK-L 1097

Query: 423  RKFRV----RKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
               +V      V A    + AL  DG V  WG      LG   ++ S  TP+ V GL + 
Sbjct: 1098 PSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG-DGTTESRATPITVAGLGA- 1155

Query: 473  QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
             +V V+    H LAL     V+AWG NT GQ G D  +     P +VVGLE V    I A
Sbjct: 1156 -MVAVAPAARHTLALRSDGTVWAWGDNTFGQLG-DGSNTRRTLPVQVVGLEKVTA--IAA 1211

Query: 533  GSLFSIA 539
            GS  S+A
Sbjct: 1212 GSYHSLA 1218



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 127/246 (51%), Gaps = 17/246 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L VT  G V++WG    G+LG G+   QR     + GL    VT ++AG +HS A+  
Sbjct: 59  HSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGL--TDVTSIAAGDAHSLALRA 116

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           D  ++TWG  + G++G G    R TP  V  LSDV AV+ GE H+L L  DG TVW+ GS
Sbjct: 117 DRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVAVAAGEFHSLALRADG-TVWAWGS 175

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG   +    +P  +  L    V  + AG  FS+A+  DG V+ WG      LG 
Sbjct: 176 NFYGQLGRGHSQPGPSPAQVVGLTG--VVALAAGFDFSLAVRSDGTVWAWGANGSGQLG- 232

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             + I    P  V+ L    +  V+ G  H LAL     V+AWGSN+ GQ G   ++   
Sbjct: 233 DGTYIQRLAPTQVSQL--QGVSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWT--- 287

Query: 514 DQPSKV 519
           D+PS V
Sbjct: 288 DRPSPV 293



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 156/346 (45%), Gaps = 25/346 (7%)

Query: 190  VYTWGCNLHHQILDE-VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
            V++WG N   Q+ D  V  +    +++ L   +  + AG   + +L + G +  +G    
Sbjct: 820  VWSWGGNSQGQLGDGGVTSRAYPAKVEGL-WGVVAVLAGGDSSMVLRADGTVWTWGANGS 878

Query: 249  G-LANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            G L + T+    +  PLE   +  ++     EAH L V+ +G V++WG    G+LG G T
Sbjct: 879  GQLGDGTLGD--RASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANGRGQLGDGTT 936

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
             S   P  + G L       VS G ++S AV  DG +++WG  D G+LG G   +R TP 
Sbjct: 937  TSSASPVRVAG-L--SAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPK 993

Query: 367  LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
             V +L+DV AV+ G  H + +  DG TVW  G+   G++G         P  +E L    
Sbjct: 994  PVQDLADVKAVTAGAHHVVAVRHDG-TVWGWGANAFGQVGDGTHFWRFRPVRVEGL--LN 1050

Query: 427  VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI----VD 476
              +  AG   S+AL  D     WG      LG   S  S   PV V  L S ++    V 
Sbjct: 1051 AVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLE-PVGVK-LPSSKVLVPAVS 1108

Query: 477  VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            VS    H  AL     V  WG N  GQ G D  +     P  V GL
Sbjct: 1109 VSAWHQHAAALLADGTVQTWGGNADGQLG-DGTTESRATPITVAGL 1153



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 172/361 (47%), Gaps = 30/361 (8%)

Query: 190 VYTWGCNLHHQILD-EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N   Q+ D   + + S  R++ L S+++ + +G      L + G +  +G    
Sbjct: 470 VWGWGRNAQGQMGDGTTKDRASPARVEGL-SSVKALASGGSHMVALRTDGTVWTWGYNGA 528

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV-LTVTSEGEVYSWGVGEHGKLGHG 304
           G LG   TT     +R P++   +S   S  + A+  L + ++G V++WG G  G+LG G
Sbjct: 529 GQLGDGTTT----DRRAPVQVTGLSGVTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDG 584

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
             + +  P  + G L   RV +++AG +H  AV +DG ++ WG+   G++G G    R  
Sbjct: 585 AGVQRASPVQVTG-L--TRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFR 641

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
              V  L+ V +V  G  H++ L+QDG T+ + G    G+ G    G VT   V  A+  
Sbjct: 642 AVQVYGLTGVSSVVGGLYHSMALAQDG-TLRAWGGNAYGQFGD---GGVTPRVVAGAVPG 697

Query: 425 FRVRKVCAGTSFSV-ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
               K+   +   V A+  DG++  WG      LGL ++  S   PV V GL   Q   +
Sbjct: 698 LSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWS-SLPVQVRGLG--QGRRL 754

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           S G +H L +     V AWG NT GQ G  + ++   + S V+     C R   AG   S
Sbjct: 755 SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTH---RASPVLARNLPCARAASAGRQHS 811

Query: 538 I 538
           +
Sbjct: 812 L 812



 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 139/321 (43%), Gaps = 29/321 (9%)

Query: 146  LADDNIKPLGDRKSSN-SNTDIDSTSTPKLTYNIGDTDISVA-----------HSKVYTW 193
            LAD  ++  G        +   +S +TP     +G   ++VA              V+ W
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGLGAM-VAVAPAARHTLALRSDGTVWAW 1178

Query: 194  GCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGL 250
            G N   Q+ D    + + P        +  I AG + +  +   G +  +G    G LG 
Sbjct: 1179 GDNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGD 1238

Query: 251  ANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
                 + +P R+  L+ A+         E H L +  +G +++ G   HG+LG G   ++
Sbjct: 1239 GTMDARAVPTRMLGLDGAVAV----AGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNR 1294

Query: 310  RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
              P  +   +   +V  V AG  HS A+ EDG ++TWG    G+LG G + +R  P  V 
Sbjct: 1295 LSPFQV---VELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVP 1351

Query: 370  ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
             L+ + +V  G SHT  +   G   W+ G  + G+LG  D+     P +++ L    V+ 
Sbjct: 1352 GLTAIASVGAGTSHTFAV---GSETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHG--VKS 1406

Query: 430  VCAGTSFSVALTWDGLVFWWG 450
            V AG  FSVA   DG    WG
Sbjct: 1407 VLAGGDFSVAQGADGSAMSWG 1427



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 143/334 (42%), Gaps = 31/334 (9%)

Query: 185  VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
            +A   V TWG N   Q+ D      + P   +    +  +      T  L S G +  +G
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWG 1179

Query: 245  K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
                G LG  + T + LP +V     +  ++       H L V  +G V++WG    G+L
Sbjct: 1180 DNTFGQLGDGSNTRRTLPVQV---VGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQL 1236

Query: 302  GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G G   ++  P  ++G L G     V+ G  HS  +  DG L+  G   HG+LG G   +
Sbjct: 1237 GDGTMDARAVPTRMLG-LDG--AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293

Query: 362  RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            R +P  V EL  V  V  G  H++ L +DG TVW+ G    G+LG    G VTT +V   
Sbjct: 1294 RLSPFQVVELDQVRTVRAGGYHSVALREDG-TVWTWGHNGQGQLGD---GTVTTRRVPAP 1349

Query: 422  LRKF-RVRKVCAGTSFSVAL---TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
            +     +  V AGTS + A+   TW      WG      LG   SS     P LV GL  
Sbjct: 1350 VPGLTAIASVGAGTSHTFAVGSETWA-----WGRNSHGQLGTGDSSDRLE-PTLVKGL-- 1401

Query: 472  HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            H +  V  G    +A        +WG+N  G  G
Sbjct: 1402 HGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLG 1435



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 141/344 (40%), Gaps = 30/344 (8%)

Query: 90   ADKTVQS-------SLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLI 142
            AD TVQ+        L      +++ P   A L  +  V   A H     +RS   V+  
Sbjct: 1121 ADGTVQTWGGNADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLA--LRSDGTVW-- 1176

Query: 143  LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHH 199
                 D+    LGD  ++     +      K+T     +  S+A      V+ WG N+  
Sbjct: 1177 --AWGDNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFG 1234

Query: 200  QILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTI 255
            Q+ D      + P R+  L   +  +  G++ + +L   G L   G    G LG    T 
Sbjct: 1235 QLGDGTMDARAVPTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293

Query: 256  QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
            +  P +V     +  +   +    H + +  +G V++WG    G+LG G   ++R P  +
Sbjct: 1294 RLSPFQV---VELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPV 1350

Query: 316  MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
             G L    +  V AG SH+ AV  +   + WG   HG+LG GD   R  PTLV  L  V 
Sbjct: 1351 PG-L--TAIASVGAGTSHTFAVGSE--TWAWGRNSHGQLGTGDSSDRLEPTLVKGLHGVK 1405

Query: 376  AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            +V  G   ++    DG  + S G+   G LG    G+ T P  +
Sbjct: 1406 SVLAGGDFSVAQGADGSAM-SWGTNVHGTLGIGLPGQRTVPGAV 1448



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 11/152 (7%)

Query: 221  IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
            +R + AG + +  L   G +  +G   +G LG    T + +P  VP   AI S+      
Sbjct: 1306 VRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLTAIASVG---AG 1362

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             +H   V SE   ++WG   HG+LG G++  +  P L+ G L+G  V  V AG   S A 
Sbjct: 1363 TSHTFAVGSE--TWAWGRNSHGQLGTGDSSDRLEPTLVKG-LHG--VKSVLAGGDFSVAQ 1417

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
              DG   +WG   HG LG G    R  P  VT
Sbjct: 1418 GADGSAMSWGTNVHGTLGIGLPGQRTVPGAVT 1449


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 23/322 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A+ ++    C E H   +++ G++++WG G +  G LGHG  +S   PK + G L G +V
Sbjct: 315 AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQV 374

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGES 382
             ++ G  HSA  T +G L+T+G+G  G LGHGD KS  +P  +  L+ +    V+CG  
Sbjct: 375 LSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVW 434

Query: 383 HTL----VLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           HT     V+SQ G  +     ++ G G+  +LGH +      P  + +L  +  +++  G
Sbjct: 435 HTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACG 494

Query: 434 TSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALS 488
            + +VALT  G VF  G      L + S +   P LV   L    + ++S G  H   L+
Sbjct: 495 HTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLT 554

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSA 548
             +EV+ WG    GQ G  +  +    P+ V  L++  V+ +  G+ F+ +  +   +  
Sbjct: 555 SRSEVFTWGRGANGQLGHGDTED-RKLPTLVEALKERHVKNLSCGANFTSSICI---HKW 610

Query: 549 LSSAFTPLCVDVRPHTFTLIRE 570
           +S A   +C   R   F   R+
Sbjct: 611 VSGADQSVCSGCR-QAFGFTRK 631



 Score =  100 bits (249), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 142/327 (43%), Gaps = 77/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+TWG     ++   +    + P+L +SL  +NI ++  G++ T  + ++G L  +G
Sbjct: 283 QGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWG 342

Query: 245 -----KGWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG        +PKRV  PLE   V LS++ C   H    TS G+++++G G 
Sbjct: 343 DGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQV-LSIA-CGTWHSALATSNGKLFTFGDGT 400

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYTWG 347
            G LGHG+  S   PK +   L G +  +V+ G  H+AA+ E             L+TWG
Sbjct: 401 FGALGHGDRKSVSSPKELQS-LNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWG 459

Query: 348 EGDHGRLGHGD--------------------LKSRHTPTLVTELSD-------------- 373
           +GD  RLGHG+                    L   HT T+    S               
Sbjct: 460 DGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519

Query: 374 --------------------VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
                               V  +SCG  HT VL+     V++ G G  G+LGH DT   
Sbjct: 520 NPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSE-VFTWGRGANGQLGHGDTEDR 578

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
             P ++EAL++  V+ +  G +F+ ++
Sbjct: 579 KLPTLVEALKERHVKNLSCGANFTSSI 605


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 165/344 (47%), Gaps = 33/344 (9%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPR-LQSLPSNIRHIEAGQFCTFLLDST--GGLLVYGKG 246
            +YTWGC ++ ++        S P+ + S PSN + +E    C   L  +  GG+  +G G
Sbjct: 1181 IYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAG 1240

Query: 247  WLGL-----------ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
              G             N    P P        I+S++   C   H +T+TSE +V SWG 
Sbjct: 1241 DRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIA---CGRWHNMTLTSERQVLSWGA 1297

Query: 296  GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            GE G+LG  + LS+  P+++   L G+   ++  G  HSAA+ E G +  WG+  +G+LG
Sbjct: 1298 GEFGQLGLDHNLSKGTPQMVK-ALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLG 1356

Query: 356  HGDLKSRHTPTLVTELSDVGAV---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHED--- 409
            HGD KS   P +   L   G V     G +HTLV+    + V++MGS   G+LG +D   
Sbjct: 1357 HGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVV-MVANKVFAMGSNIDGQLGLDDPSR 1415

Query: 410  TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH-T 462
            TGK   P  IE L    + +V AG   S+AL+  G V+ WG      LG  + +     T
Sbjct: 1416 TGK-NVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPT 1474

Query: 463  PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            P+L        +  ++ G +   A+S   EV+ WG+   G+ G 
Sbjct: 1475 PLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGH 1518



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 142/298 (47%), Gaps = 29/298 (9%)

Query: 235 DSTGGLLVYGKGWLGLANTTIQ--------PLPKRVPLEAAIVSLSVSKCSEAHVLTVTS 286
           +  G +  YGKG  G     ++          PKR+   A +  + ++ C +     +T 
Sbjct: 512 EGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIA-CGKDSTAALTD 570

Query: 287 EGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
            G+VY+WG    GKLG   G  L+   P+L+   L    V Q+S G +H+A  T+    +
Sbjct: 571 TGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQD-LSSHVVCQISLGRNHAACSTDMHKFF 629

Query: 345 TWGEGDHGRLGHGDLKSRH-TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            WG    G+LG   + S    P  +T L  +++ +++CG  HTL+ +  G +V S G G 
Sbjct: 630 VWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTG-SVMSCGKGW 688

Query: 402 LGKLGHEDTGKVTT--------PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            G+LGH D   +T          K++E      + KV AG   S A+T  G +F WG G 
Sbjct: 689 HGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGD 748

Query: 454 R-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                  SS +   P  V   +  ++VDVSIGDSH+LAL      Y+WG+ + GQ G 
Sbjct: 749 EYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGH 806



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +   G+++SWG G  GKLG G+  +   P+ +   L   +V  ++ G  H+AA+T 
Sbjct: 199 HSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVAS-LQNSKVVHIACGAHHTAAITT 257

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSM 397
            G ++TWG+G  G+LGH  +K   +P L   L   GA  + CG+ HTLV+ + G  ++SM
Sbjct: 258 VGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQ-LYSM 316

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS 457
           G+   G+LG  D      P ++      +V  + A    S+ALT  G VF    G  +  
Sbjct: 317 GANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVF--AFGNETEP 374

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHV-LALSQYNEVYAW 496
                P  V GL    ++      +H   A+S   +++ W
Sbjct: 375 HLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW 414



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 27/277 (9%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +  IQ +P  VP    ++ + V    + H L ++++G V S G   +G+LG G+
Sbjct: 101 GKLGNQSEEIQHVPYIVPAFRNVL-VKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGD 159

Query: 306 -TLSQRRP-------------KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
             LS+  P             + I+  L    +  ++AG+ HS A+ + G +++WG G  
Sbjct: 160 HMLSRSTPVSEPSKQKSLDKLQAIIQSL--NNIVGIAAGYYHSLALNDTGKIFSWGSGSW 217

Query: 352 GRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           G+LG G   +  +P  V  L  S V  ++CG  HT  ++  G  VW+ G G  G+LGH+ 
Sbjct: 218 GKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVG-DVWTWGKGLRGQLGHKS 276

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTP 463
             +  +P++  +LRK   +K+  G   ++ +   G ++  G      LGL  ++     P
Sbjct: 277 VKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRI-IP 335

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
            LVTG ++ +++D+       +AL+   +V+A+G+ T
Sbjct: 336 TLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET 372



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 37/330 (11%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA-GHSHSAAVTEDGLLYTWGE 348
           V+ WG GE+GKLG+ +   Q  P ++    +   + +V A G  H+  ++ DG++ + G 
Sbjct: 92  VFMWGDGENGKLGNQSEEIQHVPYIVPA--FRNVLVKVCALGKQHTLFLSADGVVLSCGS 149

Query: 349 GDHGRLGHGD-LKSRHTP--------------TLVTELSDVGAVSCGESHTLVLSQDGHT 393
             +G+LG GD + SR TP               ++  L+++  ++ G  H+L L+  G  
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTG-K 208

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           ++S GSG+ GKLG        +P+ + +L+  +V  +  G   + A+T  G V+ WG GL
Sbjct: 209 IFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGL 268

Query: 454 RS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           R      S     +P L   L       +  GD H L + +  ++Y+ G+NT GQ G  +
Sbjct: 269 RGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGD 328

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLI 568
            ++ +  P+ V G  +  V  I A    SIA T    N+    AF     +  PH   + 
Sbjct: 329 ATDRI-IPTLVTGFANEKVIDIDAKGCRSIALT----NTGKVFAFGN---ETEPHLNRIP 380

Query: 569 REFLEQYSACFETGDYIPFCSKVTHAQFIL 598
           R     + A     D I   ++  H  F +
Sbjct: 381 R-----FVAGLPKSDLIIAVARTAHFDFAI 405



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 128/273 (46%), Gaps = 18/273 (6%)

Query: 287  EGE--VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
            EGE  +Y+WG G +G+LGHG       P+ I       ++ +V+ G  HS A + DG +Y
Sbjct: 1176 EGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVY 1235

Query: 345  TWGEGDHGRLGHGD----LKSRHT----PTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
             WG GD G+LG  +    +K  +     P L  +   + +++CG  H + L+ +   V S
Sbjct: 1236 AWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSE-RQVLS 1294

Query: 397  MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
             G+G  G+LG +      TP++++AL      K+  G   S A+   G +  WG  +   
Sbjct: 1295 WGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQ 1354

Query: 454  --RSSSISFHTPVLVTGLS-SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                 + S   P +   L    ++    +G +H L +   N+V+A GSN  GQ G D+ S
Sbjct: 1355 LGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPS 1414

Query: 511  NPVDQ-PSKVVGLEDVCVRQICAGSLFSIAYTV 542
                  P  +  L    + Q+ AG   S+A +V
Sbjct: 1415 RTGKNVPVSIEELNGKNICQVAAGDQHSLALSV 1447



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 130/326 (39%), Gaps = 75/326 (23%)

Query: 288  GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
            G V+ WG    G+LG     + R P L M  L    +  +SA    SA VT+ G LY  G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSL-MQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 348  EGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              +HGRLG G +    TP  +  L+ V    V+CG  H L L+++   V++ G G  G  
Sbjct: 1669 GSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEE-KRVYAWGDGKWGNA 1727

Query: 406  GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
            G  +T  V  P+ + +L    +  V AG   S AL+  G +F WG      LGL ++S +
Sbjct: 1728 GVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAA 1787

Query: 460  ---------------------FHTPVL--------------------------------V 466
                                  H+ VL                                V
Sbjct: 1788 EDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAV 1847

Query: 467  TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-----QDNFSNPVDQPS---- 517
              L   QIV  S G +H  A+SQY ++  WG+   GQ G       +  NPV  P+    
Sbjct: 1848 DALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICND 1907

Query: 518  ---KVVGLEDVCVRQICAGSLFSIAY 540
               KVV  ++V +     G L+   Y
Sbjct: 1908 PMVKVVCGQEVTIVVSEKGELYMAGY 1933



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 166/423 (39%), Gaps = 74/423 (17%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
             K+  WG N++ Q+       CS PR+     L   +R    G   T ++     +   G
Sbjct: 1342 GKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMG 1401

Query: 245  K---GWLGLANTTIQPLPKRVPL---EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                G LGL + +     K VP+   E    ++      + H L ++  GEV+SWG    
Sbjct: 1402 SNIDGQLGLDDPS--RTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPF 1459

Query: 299  GKLGHGNTLSQRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G+LGH     +  P  L+        V  ++ G++ SAA++  G ++TWG G+ G LGH 
Sbjct: 1460 GQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHA 1519

Query: 358  DLKSRHTPTLVTELSDVGAVSCGESHT--LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
                 + P+L+ + S+V  ++CG  H   +V      T+   GS N+G      +G +  
Sbjct: 1520 PKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAA 1579

Query: 416  PKVIEA-LRKFRVRKVCAGTSFSVA-LTWDGLVFWWG------LGLR------------- 454
              V  +             ++FS +     G VF WG      LG+R             
Sbjct: 1580 GSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQS 1639

Query: 455  ---------------SSSISFHTPVLVTGLSSH-----------------------QIVD 476
                           S+ ++    + V+G S H                       +I+ 
Sbjct: 1640 LLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMK 1699

Query: 477  VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
            V+ G  H LAL++   VYAWG    G  G  N +N V +P ++  L    +  + AG   
Sbjct: 1700 VACGTYHCLALTEEKRVYAWGDGKWGNAGVSN-TNDVLEPQELSSLAACSIIGVHAGGFH 1758

Query: 537  SIA 539
            S A
Sbjct: 1759 SAA 1761



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 122/265 (46%), Gaps = 40/265 (15%)

Query: 188 SKVYTWGCNLHHQILDEVRGK----CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG---- 239
            KVYTWG           +GK      +P    +P  ++ + +   C   L         
Sbjct: 572 GKVYTWG--------KSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACST 623

Query: 240 ----LLVYGK---GWLGLAN-TTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGE 289
                 V+G    G LG+ + ++  P P  +    EA I S++   C   H L  T+ G 
Sbjct: 624 DMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIA---CGGWHTLISTNTGS 680

Query: 290 VYSWGVGEHGKLGHGN-----TLSQRRP--KLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
           V S G G HG+LGHG+      LS+  P  K I+ G     + +VSAG   SAA+T  G 
Sbjct: 681 VMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGR 740

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSG 400
           L+TWG+GD  +LGH   K+   P  V   + +    VS G+SH L L   G   +S G+G
Sbjct: 741 LFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSG-LPYSWGNG 799

Query: 401 NLGKLGH-EDTGKVTTPKVIEALRK 424
           + G+LGH E   + T P+ I   R+
Sbjct: 800 SAGQLGHGEMCERETLPRPIMLCRR 824



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 13/164 (7%)

Query: 390 DGHTVWSMGSGNLGKLGH-----EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           DG+ +++ G G  G+LGH          V  PK IE L K  V  +  G   + ALT  G
Sbjct: 514 DGY-IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTG 572

Query: 445 LVFWWG------LGLRSSS-ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            V+ WG      LGL S   ++   P LV  LSSH +  +S+G +H    +  ++ + WG
Sbjct: 573 KVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWG 632

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           SNT GQ G  + S+ +  P ++  L +  +R I  G   ++  T
Sbjct: 633 SNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLIST 676



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 31/249 (12%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-W--LGLANTTIQPLPKRVPLEAAIVS 270
           +QSL +NI  I AG + +  L+ TG +  +G G W  LG+ +      P+ V       S
Sbjct: 184 IQSL-NNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFV------AS 236

Query: 271 LSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           L  SK     C   H   +T+ G+V++WG G  G+LGH +   +  P+L    L      
Sbjct: 237 LQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRL-NASLRKCGAQ 295

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
           ++  G  H+  +   G LY+ G   HG+LG GD   R  PTLVT          G ++  
Sbjct: 296 KIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVT----------GFANEK 345

Query: 386 VLSQDGHTVWSMGSGNLGK---LGHEDTGKVT-TPKVIEALRKFRVRKVCAGTS-FSVAL 440
           V+  D     S+   N GK    G+E    +   P+ +  L K  +    A T+ F  A+
Sbjct: 346 VIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAI 405

Query: 441 TWDGLVFWW 449
           +  G +F W
Sbjct: 406 SDTGQLFRW 414



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 20/257 (7%)

Query: 213 RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP-LEAA 267
           R+++L   ++  I  G+  T  L  TG +  +GK   G LGL +   +PL   VP L   
Sbjct: 546 RIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSG--KPLAIVVPQLVQD 603

Query: 268 IVSLSVSKCS--EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + S  V + S    H    T   + + WG    G+LG  +  S       +  L    + 
Sbjct: 604 LSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIR 663

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS--------RHTPTLVTELSD--VG 375
            ++ G  H+   T  G + + G+G HG+LGHGD +S         +   +V    D  + 
Sbjct: 664 SIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIV 723

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            VS G+  +  ++  G  +++ G G+  +LGHE +     P+ +E   K RV  V  G S
Sbjct: 724 KVSAGKESSAAITNKGR-LFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDS 782

Query: 436 FSVALTWDGLVFWWGLG 452
             +AL + GL + WG G
Sbjct: 783 HMLALDYSGLPYSWGNG 799



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA-GTSFSVALTWDGLVFWW 449
           G  V+  G G  GKLG++       P ++ A R   V KVCA G   ++ L+ DG+V   
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLV-KVCALGKQHTLFLSADGVVLSC 147

Query: 450 G------LGLRSSSISFHTPV--------------LVTGLSSHQIVDVSIGDSHVLALSQ 489
           G      LG+    +S  TPV              ++  L++  IV ++ G  H LAL+ 
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNN--IVGIAAGYYHSLALND 205

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             ++++WGS + G+ G  + +N  + P  V  L++  V  I  G+  + A T
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDAN-AESPRFVASLQNSKVVHIACGAHHTAAIT 256


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 138/290 (47%), Gaps = 24/290 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G H  G LGHG+  S   PK + G + G  V+ V+ G  H
Sbjct: 351 CGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWH 410

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD  S   P  V  L       V+CG  HT  + +  
Sbjct: 411 TAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELM 470

Query: 390 ------------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
                           +++ G G+ G+LGH D      P+ + AL      +V  G + S
Sbjct: 471 IASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLS 530

Query: 438 VALTWDGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNE 492
           VALT  G V+  G      L S       P LV G  ++  V +V+ G  HV  L+   E
Sbjct: 531 VALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTE 590

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           VY WG  T GQ G  + ++  + P+ V  L+D  V+ +  G  F+ A ++
Sbjct: 591 VYTWGKGTNGQLGHGD-NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISL 639



 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 126/277 (45%), Gaps = 36/277 (12%)

Query: 258 LPKRVPLEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           LPK   LE+ +V  +    C   H + VT +GEV+SWG     +LGHG  +    PKLI 
Sbjct: 282 LPK--ALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLI- 338

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---EL 371
             L G  +  V+ G  HS AVT  G LYTWG+G H  G LGHG   S   P  V+   E 
Sbjct: 339 DALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEG 398

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
             V  V+CG  HT V++  G  +++ G G  G LGH D   ++ P+ +EALR  R  +V 
Sbjct: 399 MHVSYVACGPWHTAVVTSAGQ-LFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVA 457

Query: 432 AGTSFSVA----------------------LTW-DGLVFWWGLGLRSSSISFHTPVLVTG 468
            G   + A                       TW DG     G G +   +    P  VT 
Sbjct: 458 CGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRL---VPQSVTA 514

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           L +     V+ G +  +AL+    VY  GS   GQ G
Sbjct: 515 LINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLG 551



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 155/333 (46%), Gaps = 39/333 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
           +V++WG     ++   V    S P+L       NI  +  G++ +  +  +G L  +G  
Sbjct: 312 EVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDG 371

Query: 245 ---KGWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
               G LG  +     +PK+V  P+E   VS     C   H   VTS G+++++G G  G
Sbjct: 372 THNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVA--CGPWHTAVVTSAGQLFTFGDGTFG 429

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------------DGLLY 344
            LGHG+  S   P+ +   L G+R  +V+ G  H+AAV E                G L+
Sbjct: 430 ALGHGDHSSMSIPREVE-ALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLF 488

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG+GD GRLGHGD + R  P  VT L       V+CG + ++ L+  G  V++MGS   
Sbjct: 489 TWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGR-VYTMGSAVY 547

Query: 403 GKLGHE-DTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----S 455
           G+LG     GK+  P ++E  +    V +V  G+     LT    V+ WG G        
Sbjct: 548 GQLGSPVADGKI--PTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHG 605

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
            +   +TP LV  L   Q+ +V  G +   A+S
Sbjct: 606 DNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 192/438 (43%), Gaps = 55/438 (12%)

Query: 190 VYTWGCNLHHQILDE---VRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++ WG ++   +LD+    +   S PRL +     +++++  G+    ++   G +  +G
Sbjct: 235 IFVWG-DVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWG 293

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           K   G LG    ++  L  ++    A   +        H   +   GE++ WG G H  L
Sbjct: 294 KEDGGRLG-HKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS-L 351

Query: 302 GHGNTLSQRR---PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G  +   QR    P  + G L G  V +++ G  H+A ++  G L+T+G+G  G LGHGD
Sbjct: 352 GVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD 411

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV---------WSMGSGNLGKLGH 407
             S   P  V  L    V AV+CG  HT  + +   TV         ++ G  + GKLGH
Sbjct: 412 TSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH 471

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG---LRSSSI 458
            D      P  ++AL      +V    + +VALT  G+VF  G      LG   L  SSI
Sbjct: 472 SDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSI 531

Query: 459 -SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ-- 515
            S   P     L +  + ++S G SHV  L+   +V+ WG  T GQ G  N+   VD+  
Sbjct: 532 CSVEGP-----LKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNY---VDRSS 583

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
           P+ V  LED  V  I  GS F++A  +  S S    +    C         L   F  + 
Sbjct: 584 PTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRC--------RLSFSFARKK 635

Query: 576 SACFETGDYIPFCSKVTH 593
             C+  G    FC+  ++
Sbjct: 636 HNCYNCGSM--FCNSCSN 651


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 16/281 (5%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           + C  +H L +T +G++Y+ G  +HG+LGH  N L  +RP+ I   L    VTQVS G S
Sbjct: 41  AACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFI-SALENYIVTQVSCGLS 99

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQ 389
           HS A+T  G L++WG    G+LGH  D+ S   P ++  ++   V  +SCG SH L L+ 
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN 159

Query: 390 DGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            G  +++ G+   G+LG   TG KV T  ++++L    +  +  G + S A++  G +F 
Sbjct: 160 SGE-LFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFG 218

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL     S   P  +  L S  +  +S GD   + L+Q   V+  G  T G
Sbjct: 219 WGKNTFGQLGLNDLD-SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFG 277

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP 543
           Q G     N +  P  V  L    + QI  G   ++A+ VP
Sbjct: 278 QLGHGTHGNEI-LPRMVFELMGSKITQIACGRKHTLAF-VP 316



 Score =  127 bits (319), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 138/265 (52%), Gaps = 17/265 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +Y WG   HG+LG G    ++   P+  M       V Q + G SH+  +T+DG LYT G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPRE-MDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 348 EGDHGRLGH--GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
             DHG+LGH   +L ++  P  ++ L +  V  VSCG SH+L L+  G  ++S GS   G
Sbjct: 62  NNDHGQLGHDTNNLPNKR-PQFISALENYIVTQVSCGLSHSLALTNWGQ-LFSWGSNATG 119

Query: 404 KLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           +LGH+ D      P++I+++    V ++  G S  +ALT  G +F WG      LGL ++
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                T  LV  L+   I  ++ G +H  A+S+   ++ WG NT GQ G ++  +    P
Sbjct: 180 GKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC-YP 238

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           +++  L  + VR I  G  FS+  T
Sbjct: 239 TQLKTLRSLGVRYISCGDDFSVFLT 263



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 17/295 (5%)

Query: 189 KVYTWGCNLHHQILDEVRG-KCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGK 245
           K+YT G N H Q+  +       RP+  S   N  +  +  G   +  L + G L  +G 
Sbjct: 56  KLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGS 115

Query: 246 GWLGLANTTIQ----PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G     +     P P+ +   A    + +S C  +H L +T+ GE+++WG  E+G+L
Sbjct: 116 NATGQLGHDLDMVSYPAPRMIKSIATKTVVQIS-CGHSHCLALTNSGELFAWGANEYGQL 174

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +     ++  L G  +  ++ G +HS AV++ G ++ WG+   G+LG  DL S
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDS 234

Query: 362 RHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R  PT +  L  +G   +SCG+  ++ L+Q+G  V++ G G  G+LGH   G    P+++
Sbjct: 235 RCYPTQLKTLRSLGVRYISCGDDFSVFLTQEG-GVFTCGLGTFGQLGHGTHGNEILPRMV 293

Query: 420 EALRKFRVRKVCAGTSFSVAL------TWDGLVFWWGLGLRSSSISFHTPVLVTG 468
             L   ++ ++  G   ++A        +   +   G     SS+SF+TP +V G
Sbjct: 294 FELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVRG 348


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 178/395 (45%), Gaps = 39/395 (9%)

Query: 189 KVYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++Y WG   H Q+    +++ +    R    +  + ++ +  G   T  L +TG +   G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 245 KG-WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              +  L +      P+ +P     V + +S C   H L ++  G+V SWG  + G+LGH
Sbjct: 66  SNDYSQLGHDLPTKRPQLIPELQDYVIIQIS-CGSRHSLALSDWGQVLSWGDNDCGQLGH 124

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HGDLK 360
                  +   ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG     DL 
Sbjct: 125 ATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184

Query: 361 SRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             + P  +T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D      P  
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDETNRAYPTQ 243

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQ 473
           ++ LR   VR V  G  FSV LT +G VF  G G         S +   P +V  L    
Sbjct: 244 LKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST 303

Query: 474 IVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSN---------PVDQPSKVVGLE 523
           I  V+ G+ H LAL     +VYA+G  + GQ G  +  +         P   PS    L+
Sbjct: 304 ITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSAQLQ 363

Query: 524 ------DVCVRQICAGSLFSIAYT------VPPSN 546
                  + +RQI +G   SI  T      VPP +
Sbjct: 364 SNDSQVSLVIRQIFSGGDQSIVTTTLFIDKVPPED 398



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 136/271 (50%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P+ I        V QV+ GH H+  +T  G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVACGHRHTLFLTATG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  D+ +LGH DL ++  P L+ EL D  +  +SCG  H+L LS  G  V S G 
Sbjct: 60  KVYACGSNDYSQLGH-DLPTKR-PQLIPELQDYVIIQISCGSRHSLALSDWGQ-VLSWGD 116

Query: 400 GNLGKLGHEDTGKVTT-PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LGH    ++   PKV+  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + S +   H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G ++ +
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N    P+++  L  + VR +  G  FS+  T
Sbjct: 237 NRA-YPTQLKTLRTLGVRFVACGDEFSVFLT 266


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    VSCG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 169/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + VS C   H L ++   EV+SWG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVS-CGYYHSLALSKASEVFSWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +             W S   GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 N-------------WFSYN-GQC-----------PPDIDSQEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 FSPQNCGPPDDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV VS G  H LALS+ +EV++WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 149/334 (44%), Gaps = 24/334 (7%)

Query: 190 VYTWGCNLHHQ-----ILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLV 242
           ++ WG  +H +     I DE       PR       SN+  I  G+  T  +   G +  
Sbjct: 1   MFCWGSTIHGELGLGGIEDE---NIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYS 57

Query: 243 YGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G    G L +   +   + +P   A V   ++ C   H L V   G+++SWG   +G+L
Sbjct: 58  CGNNDYGQLGHEKARKRLQLIPGLDAFVFRKIA-CGNCHTLAVNEWGQLFSWGCNMNGQL 116

Query: 302 GHGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           G  +   ++R P++I   L    + Q++ G  HS A+T DG LY WG    G+LG G   
Sbjct: 117 GLNSVDCTERVPRMIKV-LGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 361 SRH-TPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
           +    P  ++ L+ V    ++CG  HT+V+S+ G  V+S G    G+LG  D  +   P 
Sbjct: 176 TTEIKPKRISTLAAVPIAFIACGGYHTIVISKSG-AVFSWGRNTFGQLGLNDVQQRNLPC 234

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSH 472
            +  LR  +V     G  FSV LT DG VF  G G+       +T     P  V  L   
Sbjct: 235 QLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGS 294

Query: 473 QIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
            +  +S G  H LAL      VYAWG    GQ G
Sbjct: 295 TVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 11/240 (4%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++++WGCN++ Q+ L+ V      PR+ + L +N I  I  G   +  L + G L  +G 
Sbjct: 104 QLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGS 163

Query: 245 --KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             +G LGL + TT +  PKR+   AA V ++   C   H + ++  G V+SWG    G+L
Sbjct: 164 NREGQLGLGSYTTTEIKPKRISTLAA-VPIAFIACGGYHTIVISKSGAVFSWGRNTFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  N + QR     +  L   +V   + G   S  +T DG ++T G G +G+LGHG+  +
Sbjct: 223 GL-NDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTN 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  +SCG+ HTL L      V++ G G  G+LG+  +   TTP+V+
Sbjct: 282 EILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 13/207 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRH--TPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++ WG   HG LG G ++  +   P  V   E S+V  ++CGE++T+ ++++G  V+S G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEG-KVYSCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           + + G+LGHE   K    ++I  L  F  RK+  G   ++A+   G +F WG      LG
Sbjct: 60  NNDYGQLGHEKARKRL--QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L S   +   P ++  L ++ IV ++ G  H +AL+   E+YAWGSN  GQ G  +++  
Sbjct: 118 LNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTT 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +P ++  L  V +  I  G   +I 
Sbjct: 178 EIKPKRISTLAAVPIAFIACGGYHTIV 204



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 18/265 (6%)

Query: 290 VYSWGVGEHGKLGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           ++ WG   HG+LG G     N    R    I        V Q++ G +++ A+T++G +Y
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIE----ASNVEQIACGENYTVAITKEGKVY 56

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           + G  D+G+LGH   + R       +      ++CG  HTL +++ G  ++S G    G+
Sbjct: 57  SCGNNDYGQLGHEKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQ-LFSWGCNMNGQ 115

Query: 405 LGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           LG          P++I+ L    + ++  GT  S+ALT DG ++ WG      LGL S +
Sbjct: 116 LGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            +   P  ++ L++  I  ++ G  H + +S+   V++WG NT GQ G ++     + P 
Sbjct: 176 TTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQR-NLPC 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYTV 542
           ++  L +  V     G  FS+  T+
Sbjct: 235 QLRTLRNAKVCYATCGEEFSVFLTM 259


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  127 bits (319), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 35/375 (9%)

Query: 148 DDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDE--V 205
           DD I P G    S ++T+      P +     D +++ A+      G NL   +     +
Sbjct: 201 DDGIAPAGTASESGADTN-----KPVIELVAQDGNVTQANDGTTNSGFNLAGNVKANTMI 255

Query: 206 RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV 262
            G     +++ +      + AG +    L S G +  +G    G LG  +T  + +P +V
Sbjct: 256 NGTADNAKIE-IQEKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQV 314

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
              + +  +S    +  H + + S+G +++WG    G+LG+ +      P  ++ G    
Sbjct: 315 ---SGLTEVSAISAAFGHSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQVLTG---- 367

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
            V  +SAG+ +S AV  DG ++ WG   +G+ G+        P  V+ L+ V ++S   S
Sbjct: 368 -VASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSS 426

Query: 383 ----HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
               H+L L  DG TVW  G  + G+LG+    +   P  ++AL    V  + AG++ S+
Sbjct: 427 NNYSHSLALKSDG-TVWGWGYNSTGQLGNNSATQSLVP--VQALGLTGVVSISAGSNHSM 483

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           AL  DG  + WG      LG  S++ S   PV V GLS   +  +S G+ H +AL     
Sbjct: 484 ALKSDGTAWIWGGNSDGQLGNNSTAQSL-VPVQVPGLSG--VSAISAGNYHSMALKSDGT 540

Query: 493 VYAWGSNTMGQCGQD 507
           V+AWG N+ GQ G +
Sbjct: 541 VWAWGRNSSGQLGNN 555



 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 20/268 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + S+G V++WG   +G+LG G+T+++  P  + G      V+ +SA   HS A+  
Sbjct: 279 HNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLT---EVSAISAAFGHSMALKS 335

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG L+TWG  + G+LG+  +     P  V  L+ V ++S G  ++L +  DG TVW+ G 
Sbjct: 336 DGTLWTWGYNNRGQLGNNSITQSLVPVQV--LTGVASISAGYDYSLAVKSDG-TVWAWGR 392

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF--SVALTWDGLVFWWG------L 451
              G+ G+  T     P  +  L         +  ++  S+AL  DG V+ WG      L
Sbjct: 393 NYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQL 452

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  S++ S   PV   GL+   +V +S G +H +AL      + WG N+ GQ G ++ + 
Sbjct: 453 GNNSATQSL-VPVQALGLTG--VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQ 509

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +  P +V GL  V    I AG+  S+A
Sbjct: 510 SL-VPVQVPGLSGVSA--ISAGNYHSMA 534



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 165/374 (44%), Gaps = 34/374 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAG-----QFCTFLLDSTGG----- 239
           V+ WG N + +I+         P   ++ + I     G     Q    +  S+GG     
Sbjct: 589 VWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYS 648

Query: 240 --------LLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV 290
                   +  +G G  G L N T + +    P+   +  +      E H L + S+G  
Sbjct: 649 LALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRD-LTGVEQISAGEGHSLALRSDGTA 707

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           ++WG   +G LG+ +T++   P + + GL G  V+ V AG  HS A+  DG ++ WG   
Sbjct: 708 WAWGDNAYGMLGNNSTVTSSIP-VQVSGLTG--VSSVKAGRLHSMALKSDGTVWAWGYNT 764

Query: 351 HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            G+LG G    R  P  V+ L DV A+S G+ H++V+  DG TVW+ G  + G+LG+  T
Sbjct: 765 EGQLGDGSTTQRLVPVQVSGLEDVIAISAGDYHSMVIKSDG-TVWAWGRNSNGQLGNNST 823

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVL 465
                P  +  L    V  + AGT+ S A+  DG    WG          S+I    PV 
Sbjct: 824 TGSLVPVQVPGLTG--VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQ 881

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           V+       + + + +SH L L     V+  G N  G  G ++ ++    P + +GL  V
Sbjct: 882 VSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDS-KVPVQTLGLAGV 940

Query: 526 CVRQICAGSLFSIA 539
               I AG   S+A
Sbjct: 941 V--SISAGLYHSMA 952



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 132/265 (49%), Gaps = 14/265 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           ++TWG N   Q+ +    +   P +Q L + +  I AG   +  + S G +  +G+ + G
Sbjct: 339 LWTWGYNNRGQLGNNSITQSLVP-VQVL-TGVASISAGYDYSLAVKSDGTVWAWGRNYYG 396

Query: 250 L--ANTTIQPL-PKRVPLEAAIVSLSVSKCSE-AHVLTVTSEGEVYSWGVGEHGKLGHGN 305
               N+TI  L P +V     + S+S +  +  +H L + S+G V+ WG    G+LG+ N
Sbjct: 397 QFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGN-N 455

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           + +Q    +   GL G  V  +SAG +HS A+  DG  + WG    G+LG+        P
Sbjct: 456 SATQSLVPVQALGLTG--VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVP 513

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V A+S G  H++ L  DG TVW+ G  + G+LG+  T     P  I+ L   
Sbjct: 514 VQVPGLSGVSAISAGNYHSMALKSDG-TVWAWGRNSSGQLGNNSTTVSLVP--IQVLTG- 569

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG 450
               V AGT  S+AL  DG V+ WG
Sbjct: 570 -TTSVSAGTYHSMALKSDGAVWGWG 593



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 161/360 (44%), Gaps = 39/360 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N   Q+ +        P +Q L +    + AG + +  L S G +  +G     
Sbjct: 541 VWAWGRNSSGQLGNNSTTVSLVP-IQVL-TGTTSVSAGTYHSMALKSDGAVWGWGNNEYK 598

Query: 250 --LANTTI-QPLPKRVPLEAAIVSL---------------SVSKCSEAHVLTVTSEGEVY 291
             ++NT + Q +P +  + A I                  + S  S  + L + S+  V+
Sbjct: 599 KIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVW 658

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           +WG G  G LG+G T  Q      +  L G  V Q+SAG  HS A+  DG  + WG+  +
Sbjct: 659 AWGYGGSGVLGNG-TGEQMLVGYPVRDLTG--VEQISAGEGHSLALRSDGTAWAWGDNAY 715

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           G LG+    +   P  V+ L+ V +V  G  H++ L  DG TVW+ G    G+LG   T 
Sbjct: 716 GMLGNNSTVTSSIPVQVSGLTGVSSVKAGRLHSMALKSDG-TVWAWGYNTEGQLGDGSTT 774

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
           +   P  +  L    V  + AG   S+ +  DG V+ WG      LG  S++ S   PV 
Sbjct: 775 QRLVPVQVSGLED--VIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSL-VPVQ 831

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CGQDNFSN--PVDQPSKVVGL 522
           V GL+   +  +S G +   A+       AWGSNT GQ C   N     PV Q S+ VG+
Sbjct: 832 VPGLTG--VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPV-QVSEPVGV 888



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 134/267 (50%), Gaps = 16/267 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
            + WG N +  + +      S P   S  + +  ++AG+  +  L S G +  +G   +G
Sbjct: 707 AWAWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSSVKAGRLHSMALKSDGTVWAWGYNTEG 766

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +TT + +P +V     ++++S     + H + + S+G V++WG   +G+LG+ +T
Sbjct: 767 QLGDGSTTQRLVPVQVSGLEDVIAIS---AGDYHSMVIKSDGTVWAWGRNSNGQLGNNST 823

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                P + + GL G  V  +SAG + SAAV  DG    WG   +G+L  G    R  P 
Sbjct: 824 TGSLVP-VQVPGLTG--VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPV 880

Query: 367 LVTELSDVGAVS--CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV-IEALR 423
            V+E   VGA+S     SH+L+L  DG TVW  G  + G +G+     +T  KV ++ L 
Sbjct: 881 QVSEPVGVGALSMVVANSHSLILKLDG-TVWGCGRNDYGPIGNN---SITDSKVPVQTLG 936

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG 450
              V  + AG   S+AL  DG ++ WG
Sbjct: 937 LAGVVSISAGLYHSMALKSDGTIWGWG 963



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 117/225 (52%), Gaps = 15/225 (6%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE 381
           ++  QV AG+ H+ A+  DG ++ WG   +GRLG G   +R  P  V+ L++V A+S   
Sbjct: 268 EKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSAISAAF 327

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            H++ L  DG T+W+ G  N G+LG+    +   P  ++ L    V  + AG  +S+A+ 
Sbjct: 328 GHSMALKSDG-TLWTWGYNNRGQLGNNSITQSLVP--VQVLTG--VASISAGYDYSLAVK 382

Query: 442 WDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGD--SHVLALSQYNEVY 494
            DG V+ WG         +S+I    P+ V+GL+    +  +  +  SH LAL     V+
Sbjct: 383 SDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVW 442

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            WG N+ GQ G ++ +  +  P + +GL  V    I AGS  S+A
Sbjct: 443 GWGYNSTGQLGNNSATQSL-VPVQALGLTGVV--SISAGSNHSMA 484



 Score = 77.4 bits (189), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 8/224 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D    +   P   S   ++  I AG + + ++ S G +  +G+   G
Sbjct: 757 VWAWGYNTEGQLGDGSTTQRLVPVQVSGLEDVIAISAGDYHSMVIKSDGTVWAWGRNSNG 816

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +TT   +P +VP    +  +S    + A    V S+G   +WG   +G+L  G+ 
Sbjct: 817 QLGNNSTTGSLVPVQVPGLTGVALISAGTNTSA---AVKSDGTALAWGSNTYGQLCDGSN 873

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           + QR   + +    G     +   +SHS  +  DG ++  G  D+G +G+  +     P 
Sbjct: 874 I-QRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPV 932

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
               L+ V ++S G  H++ L  DG T+W  G    G+LG   T
Sbjct: 933 QTLGLAGVVSISAGLYHSMALKSDG-TIWGWGYNGYGQLGDNST 975


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score =  127 bits (319), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 94/311 (30%), Positives = 141/311 (45%), Gaps = 44/311 (14%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H   +T+ GEVY+WG G  G+LGHG+  S + P+L+ G L G    QV+ G +++A
Sbjct: 7   CGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACGFAYTA 66

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA----------VSCGESHTL 385
           AV+  G LYTWG G++GRLG GD         V     + A          V  G  HT+
Sbjct: 67  AVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVGPGGYHTV 126

Query: 386 VLSQDGHTVWSMGSGNLGKLGH----------EDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            L      V++ G   +G+LG+          E    V  P+ ++++   RVR+V AG  
Sbjct: 127 ALVSPA-DVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWG 185

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTP---------VLVTGLSSHQIVDVSIG 480
            +  LT +G  +  G      LGL       H            L+  L + ++  ++ G
Sbjct: 186 HTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACG 245

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI----CA--GS 534
             H +AL++  EV++ G+   GQ G  N  N  +Q  +VV       R +    C   G+
Sbjct: 246 GEHSVALTEDGEVHSCGAGNKGQLGHGNVDN--EQFPRVVSRLKASRRDVLEVACGNNGT 303

Query: 535 LFSIAYTVPPS 545
           L    Y  PPS
Sbjct: 304 LVLCGYFNPPS 314



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 91/208 (43%), Gaps = 27/208 (12%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT-ELSDV--GAVSCG 380
           V  V  G  H+A +T  G +YTWG G  GRLGHGD  S   P LV   L  V    V+CG
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKL------GHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            ++T  +S  G  +++ G+G  G+L      GH     V TP+ ++A     VR++  G 
Sbjct: 62  FAYTAAVSAQG-ALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVGP 120

Query: 435 S--FSVALTWDGLVFWWG------LGLRSSSISFHT---------PVLVTGLSSHQIVDV 477
               +VAL     V+ WG      LG  ++ +             P  V  +S  ++  V
Sbjct: 121 GGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRV 180

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             G  H   L+     Y  G N  GQ G
Sbjct: 181 VAGWGHTALLTAEGAAYVCGRNFQGQLG 208



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 79/298 (26%), Positives = 134/298 (44%), Gaps = 42/298 (14%)

Query: 233 LLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGE 289
           +L + G +  +G+G  G L +     L     +  A+V +  ++  C  A+   V+++G 
Sbjct: 14  VLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACGFAYTAAVSAQGA 73

Query: 290 VYSWGVGEHGKL------GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS--HSAAVTEDG 341
           +Y+WG GE+G+L      GHG       P+  +    G+ V ++S G    H+ A+    
Sbjct: 74  LYTWGAGENGRLGLGDYTGHGAAADVLTPR-PLDAFGGRAVREISVGPGGYHTVALVSPA 132

Query: 342 LLYTWGEGDHGRLGH--GDLKSRH--------TPTLVTELSD--VGAVSCGESHTLVLSQ 389
            +YTWG    G+LG+   D+  R+         P  V  +S   V  V  G  HT +L+ 
Sbjct: 133 DVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVAGWGHTALLTA 192

Query: 390 DGHTVWSMGSGNLGKLG--------HEDTGKVTTP--KVIEALRKFRVRKVCAGTSFSVA 439
           +G   +  G    G+LG        H + G    P  ++++ L   RV ++  G   SVA
Sbjct: 193 EG-AAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVA 251

Query: 440 LTWDGLVFWWGLGLR-----SSSISFHTPVLVTGL--SSHQIVDVSIGDSHVLALSQY 490
           LT DG V   G G +      +  +   P +V+ L  S   +++V+ G++  L L  Y
Sbjct: 252 LTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVACGNNGTLVLCGY 309


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  127 bits (319), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 166/348 (47%), Gaps = 23/348 (6%)

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           +P   S+  ++  I +G     L+   G +  +G+   G LG         P+ V    A
Sbjct: 256 KPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEF-LA 314

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + ++    C E H   V+   E++SWG G++  G LGHG  +S   PK I G L G +V 
Sbjct: 315 VTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVI 374

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESH 383
            ++ G  HSA  T +G L+T+G+G  G LGHG+ +S   P  V  LS +    V+CG  H
Sbjct: 375 SIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWH 434

Query: 384 TL----VLSQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
           T     V  Q G  V     ++ G G+  +LGH +      P  +  L ++   ++  G 
Sbjct: 435 TAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGH 494

Query: 435 SFSVALTWDGLVFWWG---LGLRSSSIS-FHTPVLVT-GLSSHQIVDVSIGDSHVLALSQ 489
           + ++ALT  G +F  G    G   +S+S    P+LV   L    + ++S G  HV AL+ 
Sbjct: 495 TMTIALTTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTS 554

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
            +E+Y WG    G+ G  +  +    P+ V  L++  V+ I  GS F+
Sbjct: 555 RSELYTWGKGANGRLGHGDIDD-RKSPTLVEALKERHVKNISCGSSFT 601


>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1166

 Score =  127 bits (318), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 173/364 (47%), Gaps = 24/364 (6%)

Query: 190 VYTWGCNLHHQI---LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
           VY WG + + Q+     E    C  PR  S    I  I  G+  T  +   G +   G  
Sbjct: 36  VYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNN 95

Query: 245 -KGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            +G LG++   +  +  P  V       ++ +S C   H  TV   G++++WG    G+L
Sbjct: 96  NQGQLGVSVDESYYKSAPTLVEGLKGYKAVQIS-CGAYHTATVCDNGQLFTWGQNCEGQL 154

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G + +   P+++   L       VS G  ++  +T+   ++ +G+G  G+LG G+  +
Sbjct: 155 GIGKSDNMTTPQIV--DLKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKCGQLGLGNECN 212

Query: 362 RHTP-TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI- 419
            + P  L  ++ ++ A+SCG+ HTL L+++G   +S G+    +LG  +  + +   V  
Sbjct: 213 EYKPRQLQIQMQNIVAISCGDRHTLFLNEEGE-AFSCGNNTYNQLGCANNSQSSNIPVKV 271

Query: 420 --EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDV 477
             ++  KF V+ + A T  S AL+ +G ++ WG G       F  P      +   ++D+
Sbjct: 272 KQKSTLKF-VKVIAANTPMSAALSSEGYLYLWGTGFFGQ---FDRPTRCE-FAPKDLLDI 326

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAGSL 535
            IG+  +  L    +VY+WGSN  G+ GQ   +N     +P +V  ++D  V+++  G+ 
Sbjct: 327 CIGNQFICLLDGEGKVYSWGSNMFGELGQ-GIANGQQALEPIQVDKIKDKNVKRLYCGAN 385

Query: 536 FSIA 539
           F  A
Sbjct: 386 FVFA 389


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 152/315 (48%), Gaps = 24/315 (7%)

Query: 234 LDSTGGLLVYGK------GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
           LD++ GL+ +G       G+   +    QP P+R+P        S+S  S  +   +T  
Sbjct: 594 LDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGS-YYSAALTEN 652

Query: 288 GEVYSWGVGEHGK-----LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
           G+VY WG G         LG      Q  P + +  L    +  VS G  HSAAV  +G 
Sbjct: 653 GDVYMWGRGSVKNPPVPVLGIPQIEDQLLP-IKLESLTD--IVVVSIGFYHSAAVRANGE 709

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSG 400
           L TWG G+ G+LGHGD +++  P ++  L+   +  V CGE HT+ L+++G  V++ GS 
Sbjct: 710 LLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGK-VYTWGSS 768

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT--WDGLVFWWGLGLRSSSI 458
             G+LG  DT +   P  + AL K+ V ++ +G++    LT   + LVF  G  + ++SI
Sbjct: 769 EYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGAASI 828

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
               P LV  L    I  +  G     A+S+  +VY WG  T  + G  N +     P  
Sbjct: 829 -ISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWG--TGQELGHGN-NQTESTPKL 884

Query: 519 VVGLEDVCVRQICAG 533
           V  L +  +RQI  G
Sbjct: 885 VEALRNQSIRQISCG 899



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 168/381 (44%), Gaps = 88/381 (23%)

Query: 192 TWG----CNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVY 243
           TWG    C L  ++  + +   S+P  + LP    S+I  I +G + +  L   G + ++
Sbjct: 602 TWGSASNCKLGFKVASKEQ---SQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMW 658

Query: 244 GKGW--------LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           G+G         LG+     Q LP ++     IV +S+      H   V + GE+ +WGV
Sbjct: 659 GRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVVSIGFY---HSAAVRANGELLTWGV 715

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           GE G+LGHG+T +Q  PK+I   L    +TQV  G  H+  +T++G +YTWG  ++G+LG
Sbjct: 716 GEEGQLGHGDTQNQVEPKVIQS-LTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLG 774

Query: 356 HGDLKSRHTPTLVTEL------------------------------SDVGAVS------- 378
            GD      P  VT L                              + +GA S       
Sbjct: 775 LGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAAMGAASIISIPTL 834

Query: 379 -------------CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
                        CG   T  +S+ G  V++ G+G   +LGH +    +TPK++EALR  
Sbjct: 835 VPSLKYLHIDKLCCGHYSTAAISECGD-VYTWGTGQ--ELGHGNNQTESTPKLVEALRNQ 891

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            +R++  G   +  LT  G +F  G      LG ++     + P  +  L+    + VS 
Sbjct: 892 SIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQ--NKPKKIESLTKTTFISVSC 949

Query: 480 GDSHVLAL----SQYNEVYAW 496
           G+++ +AL      + + + W
Sbjct: 950 GENYNIALFDTTRSFRDKFCW 970


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P  + G L  + +  VS G +H+ 
Sbjct: 25  CGSRHTVFVLDDGTVYTCGCNDLGQLGHDK--SRKKPDQV-GALDAQTIVAVSCGEAHTL 81

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +++WG   HG++G    +     P  +  L D+    V+CG  H+L LS++  
Sbjct: 82  ALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKES- 140

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            ++S G    G+LG   +  K + P+ I++L       + AG   S ALT  G +F WG 
Sbjct: 141 DIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGR 200

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +     P L+  L S +I+ +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 201 NKFGQLGLNDET-DRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 259

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ ++ V+ P KV  L    V QI  G   ++A+ VP S    S
Sbjct: 260 HNSTNHEVN-PRKVFELMGSIVTQIACGRQHTLAF-VPSSGRIYS 302



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 17/274 (6%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           VYT GCN   Q+  D+ R K  +  + +L +  I  +  G+  T  L+  G +  +G   
Sbjct: 39  VYTCGCNDLGQLGHDKSRKKPDQ--VGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAA 96

Query: 248 LGLANTTIQPLPKRVP------LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G    ++     RVP       +  IV ++   C   H L ++ E ++YSWG  ++G+L
Sbjct: 97  HGQIGLSVAEDYIRVPRNIKSLYDIQIVQVA---CGHHHSLALSKESDIYSWGQNQYGQL 153

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+ + +      +  L G     ++AG  HS A+T  G ++ WG    G+LG  D   
Sbjct: 154 GLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETD 213

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R  P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P+ +
Sbjct: 214 RSAPALLKSLRSQKIIHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTNHEVNPRKV 272

Query: 420 EALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
             L    V ++  G   ++A     G ++ +GLG
Sbjct: 273 FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG 306



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 111/231 (48%), Gaps = 17/231 (7%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           K V  V  G  H+  V +DG +YT G  D G+LGH   KSR  P  V  L    + AVSC
Sbjct: 18  KNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHD--KSRKKPDQVGALDAQTIVAVSC 75

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           GE+HTL L+  G  V+S G    G++G    ED  +V  P+ I++L   ++ +V  G   
Sbjct: 76  GEAHTLALNDKGQ-VFSWGHAAHGQIGLSVAEDYIRV--PRNIKSLYDIQIVQVACGHHH 132

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+AL+ +  ++ WG      LGL S       P  +  L+      ++ G  H  AL+  
Sbjct: 133 SLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMS 192

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             ++ WG N  GQ G ++ ++    P+ +  L    +  IC G   + A T
Sbjct: 193 GAIFGWGRNKFGQLGLNDETDR-SAPALLKSLRSQKIIHICCGEDHTAALT 242



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V++WG   H QI   V     R PR ++SL    I  +  G   +  L     +  +G
Sbjct: 87  GQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWG 146

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL +   +    R     A +  +       H   +T  G ++ WG  + G+L
Sbjct: 147 QNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQL 206

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 207 GLNDETDRSAPAL-LKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 265

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HTL        ++S G G  G+LG   T    +P  +
Sbjct: 266 EVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 325

Query: 420 EA 421
           + 
Sbjct: 326 KG 327



 Score = 87.4 bits (215), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 9/177 (5%)

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
            +V  V CG  HT+ +  DG TV++ G  +LG+LGH+ + K   P  + AL    +  V 
Sbjct: 18  KNVRDVGCGSRHTVFVLDDG-TVYTCGCNDLGQLGHDKSRK--KPDQVGALDAQTIVAVS 74

Query: 432 AGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
            G + ++AL   G VF WG      +GL  +      P  +  L   QIV V+ G  H L
Sbjct: 75  CGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSL 134

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           ALS+ +++Y+WG N  GQ G  +       P  +  L  +    I AG   S A T+
Sbjct: 135 ALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTM 191


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 170/365 (46%), Gaps = 36/365 (9%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFC-TFLLDST---GGLLVYGK 245
            ++ WG N   Q+ D      + P    L ++     A Q+     LD +    G    G+
Sbjct: 720  LWAWGSNAEGQVGDGALDWQAAPVRSGLAASRGLAAATQYSLGIALDGSVQSTGANASGQ 779

Query: 246  GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC-----SEAHVLTVTSEGEVYSWGVGEHGK 300
                L + T+ P  + VP+      + +S+C        H L + ++G V SWG    G+
Sbjct: 780  ----LGDGTLFPRAEPVPV------IGLSECRAIAGGATHGLALKTDGRVLSWGANAEGE 829

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            LG G T+++R P ++ G L G  V  ++ G  HS A+  DG +  WG    G+LG G   
Sbjct: 830  LGDGTTVARRAPAVV-GPLAG--VLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTV 886

Query: 361  SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            SR  P  V  L+ V A++ G+  +L L  DG TVW+ G   LG+LG   T +   P   +
Sbjct: 887  SRVLPVRVQGLTGVAAIAAGDGFSLALKHDG-TVWAWGGNTLGQLGDNTTLRSLVPVRTQ 945

Query: 421  ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            AL    V  V AG + S+AL  DG ++ WG      LG  + +     PV VT L+    
Sbjct: 946  ALTG--VTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKL-APVQVTSLTGVSA 1002

Query: 475  VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            +D   GD H LA++   +V+ WG N  GQ G+   SN    P++V GL       +  G 
Sbjct: 1003 LDA--GDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPGLTSAVA--VAGGG 1058

Query: 535  LFSIA 539
              S+A
Sbjct: 1059 EHSLA 1063



 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 155/344 (45%), Gaps = 68/344 (19%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
           + AG+  + +L + G +  +G    G LG  +T   P+P RV     + S++     E H
Sbjct: 52  VLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARV---WRLFSITAIGAGELH 108

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG----------------------- 317
            L + S+G V+SWG   +G+LG G  +S+  P  + G                       
Sbjct: 109 SLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLTNVVAIAAGFSHSMVLKADGTV 168

Query: 318 --------------------------GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
                                     GL G  V  ++AG+ HS A+T DG L+TWG    
Sbjct: 169 WAWGLNAAGQLGDGTPTRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWTWGGNVD 226

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           G+LG GDL  R T   +  ++ V A+S G SH+L+L  DG +VWS G  + G+LG     
Sbjct: 227 GQLGTGDLVGRSTAAALPGMTGVVALSGGGSHSLILKMDG-SVWSWGKNDAGQLGLGSVV 285

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLV 466
              TP  +  L +     V  G   SVAL  DG V+ WG   R+     +     +P  V
Sbjct: 286 STPTPTQVPGLTEMVA--VTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQV 343

Query: 467 TGLSSHQIVDVSIGDS-HVLALSQYNEVYAWGSNTMGQCGQDNF 509
           TGL+  Q+  V+ G   H +A+    EV+AWGSN+ GQ G   +
Sbjct: 344 TGLT--QVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTY 385



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 140/270 (51%), Gaps = 20/270 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + ++G V+SWG   +G+LG G+T     P  +   L+   +T + AG  HS A+  
Sbjct: 58  HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWR-LF--SITAIGAGELHSLALKS 114

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG +++WG   +G+LG G L SR  P  V  L++V A++ G SH++VL  DG TVW+ G 
Sbjct: 115 DGTVWSWGANTNGQLGDGTLISRSVPAPVPGLTNVVAIAAGFSHSMVLKADG-TVWAWGL 173

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG     +  TP  ++ L    V+ + AG   S+ALT DG ++ WG      LG 
Sbjct: 174 NAAGQLGDGTPTRRLTP--VQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGT 231

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNP 512
               +   T   + G++   +V +S G SH L L     V++WG N  GQ G  +  S P
Sbjct: 232 -GDLVGRSTAAALPGMTG--VVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTP 288

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P++V GL ++    +  G   S+A  V
Sbjct: 289 T--PTQVPGLTEMVA--VTGGGQHSVALRV 314



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 164/357 (45%), Gaps = 19/357 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V++WG N + Q+ D      S P      +N+  I AG   + +L + G +  +G   L 
Sbjct: 118 VWSWGANTNGQLGDGTLISRSVPAPVPGLTNVVAIAAGFSHSMVLKADGTVWAWG---LN 174

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSK---CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            A       P R      ++ L+  K       H L +T++G +++WG    G+LG G+ 
Sbjct: 175 AAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD- 233

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           L  R     + G+ G  V  +S G SHS  +  DG +++WG+ D G+LG G + S  TPT
Sbjct: 234 LVGRSTAAALPGMTG--VVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPT 291

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L+++ AV+ G  H++ L  DG TVW+ GS    +LG     +  +P  +  L +  
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDG-TVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQ-- 348

Query: 427 VRKVCAGTSF-SVALTWDGLVFWWGL---GLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
           V+ V AG    SVA+  +G V+ WG    G           V  T     +  DVS G  
Sbjct: 349 VKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVERADVSAGGG 408

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           H LAL      + WG N   Q G D  +     P +V+ L  V    + AG+  S+A
Sbjct: 409 HTLALKPDGTAWGWGLNAQSQLG-DGTTTARPLPVQVLNLTRVAA--VSAGTYHSLA 462



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 142/307 (46%), Gaps = 24/307 (7%)

Query: 212  PRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPL 264
            PR + +P    S  R I  G      L + G +L +G   +G LG   T  +  P  V  
Sbjct: 787  PRAEPVPVIGLSECRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAPAVVGP 846

Query: 265  EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
             A ++S++V      H L +  +G V +WG    G+LG G T+S+  P  + G L G  V
Sbjct: 847  LAGVLSIAVGA---RHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQG-LTG--V 900

Query: 325  TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHT 384
              ++AG   S A+  DG ++ WG    G+LG         P     L+ V AV+ G +H+
Sbjct: 901  AAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGRNHS 960

Query: 385  LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            L L  DG T+W+ GS   G+LG     +   P  + +L    V  + AG   S+A+T  G
Sbjct: 961  LALKGDG-TLWAWGSNTYGELGDGTQARKLAPVQVTSLTG--VSALDAGDHHSLAVTSGG 1017

Query: 445  LVFWWG---LGLRSSSISFHT---PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
             V+ WG    G     +  +    P  V GL+S   V V+ G  H LAL     V+AWG 
Sbjct: 1018 KVWGWGRNQFGQVGKGVKSNWQLLPAQVPGLTS--AVAVAGGGEHSLALLSDRSVWAWGH 1075

Query: 499  NTMGQCG 505
              MGQ G
Sbjct: 1076 GDMGQLG 1082



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 162/362 (44%), Gaps = 19/362 (5%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
            A    + WG N   Q+   +    +RP      +++R +  G     +L     L  +G 
Sbjct: 666  ADGTAWAWGPNAQGQLGGGLSVPRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGS 725

Query: 245  --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              +G +G      Q  P R  L A   S  ++  ++ + L +  +G V S G    G+LG
Sbjct: 726  NAEGQVGDGALDWQAAPVRSGLAA---SRGLAAATQ-YSLGIALDGSVQSTGANASGQLG 781

Query: 303  HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
             G    +  P  ++G L   R   ++ G +H  A+  DG + +WG    G LG G   +R
Sbjct: 782  DGTLFPRAEPVPVIG-LSECRA--IAGGATHGLALKTDGRVLSWGANAEGELGDGTTVAR 838

Query: 363  HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
              P +V  L+ V +++ G  H+L L  DG +V + GS   G+LG   T     P  ++ L
Sbjct: 839  RAPAVVGPLAGVLSIAVGARHSLALLGDG-SVQAWGSNIQGQLGDGTTVSRVLPVRVQGL 897

Query: 423  RKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
                V  + AG  FS+AL  DG V+ WG   LG    + +  + V V   +   +  V+ 
Sbjct: 898  TG--VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAVAA 955

Query: 480  GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            G +H LAL     ++AWGSNT G+ G    +  +  P +V  L  V    + AG   S+A
Sbjct: 956  GRNHSLALKGDGTLWAWGSNTYGELGDGTQARKL-APVQVTSLTGVSA--LDAGDHHSLA 1012

Query: 540  YT 541
             T
Sbjct: 1013 VT 1014



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 164/407 (40%), Gaps = 79/407 (19%)

Query: 186 AHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A  +++TWG N+  Q+   ++ G+ +   L  + + +  +  G   + +L   G +  +G
Sbjct: 214 ADGRLWTWGGNVDGQLGTGDLVGRSTAAALPGM-TGVVALSGGGSHSLILKMDGSVWSWG 272

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLS----------------------------- 272
           K   G LGL +    P P +VP    +V+++                             
Sbjct: 273 KNDAGQLGLGSVVSTPTPTQVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDG 332

Query: 273 -------------------VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
                              V+     H + V   GEV++WG    G++G G  L +  P 
Sbjct: 333 TQTQRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLMKLVPT 392

Query: 314 LIMGGLYGKRV----TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
                    RV      VSAG  H+ A+  DG  + WG     +LG G   +R  P  V 
Sbjct: 393 T-------ARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTTTARPLPVQVL 445

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
            L+ V AVS G  H+L L +DG TVW  G+   G +G  D   +   + ++         
Sbjct: 446 NLTRVAAVSAGTYHSLALKEDG-TVWGWGANYWGAIG--DGTALNRSQPVKVSGTLVAMT 502

Query: 430 VCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
           V +G   S+AL+ DG V+ WG      LG  + + + + P  V  L    +V ++ G  H
Sbjct: 503 VASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRNAPFRVPNLEG--VVSLAAGGEH 560

Query: 484 VLALSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQPSKVVGLED-VCVR 528
            LAL     V+ WG      C   +N    +  P +V GL D V VR
Sbjct: 561 SLALKADGTVWVWGRQDT--CADPENVGRVLRVPEQVQGLTDAVAVR 605



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 10/192 (5%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
           R   V AG  HS  +  DG +++WG  ++G+LG G  +    P  V  L  + A+  GE 
Sbjct: 48  RQGSVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRLFSITAIGAGEL 107

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+L L  DG TVWS G+   G+LG       + P  +  L    V  + AG S S+ L  
Sbjct: 108 HSLALKSDG-TVWSWGANTNGQLGDGTLISRSVPAPVPGLTN--VVAIAAGFSHSMVLKA 164

Query: 443 DGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           DG V+ WGL         +     TPV V GL+   + D++ G+ H LAL+    ++ WG
Sbjct: 165 DGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWTWG 222

Query: 498 SNTMGQCGQDNF 509
            N  GQ G  + 
Sbjct: 223 GNVDGQLGTGDL 234



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 150/359 (41%), Gaps = 24/359 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N    I D      S+P   S       + +G F +  L   G +  +G   LG
Sbjct: 469 VWGWGANYWGAIGDGTALNRSQPVKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLG 528

Query: 250 -LANTTIQP---LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            L + T+ P    P RVP    +VSL+       H L + ++G V+ WG  +        
Sbjct: 529 QLGDGTVTPTRNAPFRVPNLEGVVSLA---AGGEHSLALKADGTVWVWGRQDTCADPENV 585

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
               R P+ + G L       V AG  HS  +  DG L+ WG    G+L  G    R TP
Sbjct: 586 GRVLRVPEQVQG-L--TDAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTP 642

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  L+ V + S G   TL L  DG T W+ G    G+LG   +   T P  +  L   
Sbjct: 643 ARVDGLTGVISFSVGSEQTLALKADG-TAWAWGPNAQGQLGGGLSVPRTRPTQVPTLTD- 700

Query: 426 RVRKVCAGTSFSVALTWDGLVFW-WGLGLRS----SSISFHTPVLVTGLSSHQIVDVSIG 480
            VR V  G   ++ L  D L  W WG          ++ +    + +GL++ +   ++  
Sbjct: 701 -VRTVAMGAVHALVLK-DDLTLWAWGSNAEGQVGDGALDWQAAPVRSGLAASR--GLAAA 756

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             + L ++    V + G+N  GQ G D    P  +P  V+GL + C R I  G+   +A
Sbjct: 757 TQYSLGIALDGSVQSTGANASGQLG-DGTLFPRAEPVPVIGLSE-C-RAIAGGATHGLA 812



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 16/186 (8%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
            V+ WG N   Q+ D    +   P R Q+L + +  + AG+  +  L   G L  +G    
Sbjct: 919  VWAWGGNTLGQLGDNTTLRSLVPVRTQAL-TGVTAVAAGRNHSLALKGDGTLWAWGSNTY 977

Query: 249  GLANTTIQPLPKRVPLE-AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG--- 304
            G      Q   K  P++  ++  +S     + H L VTS G+V+ WG  + G++G G   
Sbjct: 978  GELGDGTQAR-KLAPVQVTSLTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKS 1036

Query: 305  --NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                L  + P L            V+ G  HS A+  D  ++ WG GD G+LG G    R
Sbjct: 1037 NWQLLPAQVPGLT-------SAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLR 1089

Query: 363  HTPTLV 368
             +P  V
Sbjct: 1090 LSPVQV 1095


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 146/295 (49%), Gaps = 34/295 (11%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           L +Y  GW     LG  N++    P+  P++A   V ++   C ++H L VT  G V+SW
Sbjct: 96  LQLYSWGWGDFGRLGHGNSSDVFNPQ--PIQALQGVRITQIACGDSHCLAVTVAGHVHSW 153

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G  ++G+LG GNT     P+ I     G RV  ++AG  H+AAVTEDG LY WG G +G 
Sbjct: 154 GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 212

Query: 354 LGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG GD   R  P  V+ ++      V+CG  HT+ +S  G ++++ G    G+LGH D  
Sbjct: 213 LGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSG-SIYTYGWSKYGQLGHGDFE 271

Query: 412 KVTTPKVIEALRKFRVRKVCA---------------GTSFSVALTWDGLVFWWG------ 450
               P  +EAL+   + +  A               G     AL  DG ++ WG      
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +G+  +     +PV V   +  ++V V+ G  H LAL++   V++WG  T GQ G
Sbjct: 332 VGVGDNE-DHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLG 385



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 15/277 (5%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY---G 321
           EA   S+ +     +H + + S G V SWG GE G+LGHG+   +  P ++        G
Sbjct: 16  EAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPG 75

Query: 322 KRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVS 378
              + V  G  H+ A +++ L LY+WG GD GRLGHG+      P  +  L  V    ++
Sbjct: 76  GVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA 135

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG+SH L ++  GH V S G    G+LG  +T     P+ I+A    RV+ + AG   + 
Sbjct: 136 CGDSHCLAVTVAGH-VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTA 194

Query: 439 ALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           A+T DG ++ WG G R  ++          P  V+ ++  ++V V+ G  H + +S    
Sbjct: 195 AVTEDGDLYGWGWG-RYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGS 253

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
           +Y +G +  GQ G  +F + +  P K+  L+D  + Q
Sbjct: 254 IYTYGWSKYGQLGHGDFEDHL-VPHKLEALKDTTISQ 289



 Score = 87.0 bits (214), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 96/226 (42%), Gaps = 54/226 (23%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD------VG 375
           + V  +SAG SHS A+   G++ +WG G+ G+LGHGD + R  PT++T   D        
Sbjct: 20  RSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVAS 79

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            V CG  HT   S +   ++S G G+ G+LGH ++  V                      
Sbjct: 80  VVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------------------- 117

Query: 436 FSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
                                      P  +  L   +I  ++ GDSH LA++    V++
Sbjct: 118 -------------------------FNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHS 152

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           WG N  GQ G  N  + +  P K+   E V V+ I AG+  + A T
Sbjct: 153 WGRNQNGQLGLGNTEDSL-LPQKIQAFEGVRVKMIAAGAEHTAAVT 197



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 31/258 (12%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V++WG N + Q+ L          ++Q+     ++ I AG   T  +   G L  YG GW
Sbjct: 150 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDL--YGWGW 207

Query: 248 -----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                LGL +   + +P++V        + V+ C   H +TV+S G +Y++G  ++G+LG
Sbjct: 208 GRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVA-CGWRHTITVSSSGSIYTYGWSKYGQLG 266

Query: 303 HGN----------------TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           HG+                T+SQ     ++    G    +V  G     A+  DG LY W
Sbjct: 267 HGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQW--ALAADGKLYGW 324

Query: 347 GEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G    G++G GD +   +P  V       V  V+CG  HTL L++    V+S G G  G+
Sbjct: 325 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTE-AKNVFSWGRGTSGQ 383

Query: 405 LGHEDTGKVTTPKVIEAL 422
           LGH +      PK+I+AL
Sbjct: 384 LGHGEIVDRNIPKMIDAL 401


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 34/287 (11%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-KLI 315
           P P RV          +S C   H L ++ EG +Y+WGVG +G LG G+T     P ++ 
Sbjct: 170 PKPSRVRFRDKCKIARIS-CGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVY 228

Query: 316 MGGLYGKR-----------------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +G   G                   VT  SAG  HS A T DG L+TWG G +GRLG G 
Sbjct: 229 LGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH 288

Query: 359 LKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            +   +P +V  +   D+  V+ G+SH+  + + G  +++ GSG  G+LGH D G++  P
Sbjct: 289 NRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQG-VLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR--------SSSISFHTPVLVTG 468
           + +E      V +V  GT  ++ALT  G VF WG GL          S      P  ++ 
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSD 407

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAW---GSNTMGQCGQDNFSNP 512
           + +  +++++ G  H  A++   ++  W   GS+ +G   Q N   P
Sbjct: 408 IEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFP 453



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 182/427 (42%), Gaps = 64/427 (14%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           ++ +E G+  T  L   G + V+G    G LGL     +   + V LE     +    C 
Sbjct: 502 LQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACG 561

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM----------GGLYGKRVTQV 327
             H L V   G+V++WG  ++G+LG G       P  +           G  Y   +T +
Sbjct: 562 SKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSL 621

Query: 328 SAGHSHSAAV-TEDGLLYTWGEGDHGRLGHG-DLKSRH--TPTLVT-------------E 370
               S S    TE G L+ WG  + G+LG G D+ S    TP  V              E
Sbjct: 622 GGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLE 681

Query: 371 LSDVGAVSC--------GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           +     V C        G SH+L ++  G   ++ G+G  G+LG   T    TP   +  
Sbjct: 682 MQAYKRVFCVSFSPLCSGTSHSLAITAQGE-CYAWGAGYYGRLGIGTTANAYTPTRCDFP 740

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-SSISFHTPVLVTGLSSH----QIVDV 477
           +  R+R V AG   S+AL+ DG +++WG    + S+ ++ +P +   L       ++  +
Sbjct: 741 KGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSI 800

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVC--VRQICAG 533
           S  + H LA+++  EV+AWG N + Q  CG+   +  +D+P +V GL   C  V     G
Sbjct: 801 SASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQ-AERLDRPERVAGLPSACQWVATGPQG 859

Query: 534 SLFSIAYTVPPSNSALSSA------------FTPLCVDVRPHTFTLIREFLE--QYSACF 579
           S F +A     +   + S             F+P+ V      F  +R   E  Q + C 
Sbjct: 860 SFFILASGEVFAAGVIKSGRLGTGWSKRTYQFSPVAVITHWADFGDLRYPGESSQLALC- 918

Query: 580 ETGDYIP 586
           E G+++P
Sbjct: 919 ENGEFLP 925



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 179/445 (40%), Gaps = 97/445 (21%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQS-LPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++TWG   + ++ L   RG  S   +   L  +I  + AG   +  +D  G L  +G G 
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGG 332

Query: 248 LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G      Q   P+P++V     +  L V+ C   H L +T +G V++WG G     G G
Sbjct: 333 FGRLGHGDQGEIPVPRKVEGFGGVPVLQVA-CGTFHTLALTHKGTVFAWGAGLALGFGEG 391

Query: 305 NTLSQRRPKLIMGGLYG---------KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              S        GG+             V  ++AG  HSAAVT  G L  WG G   RLG
Sbjct: 392 EDGS--------GGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLG 443

Query: 356 HGDLKSRHTPTLVTELSDVGAVS------------------------------------- 378
           HGD +++  P  V +L +   VS                                     
Sbjct: 444 HGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQ 503

Query: 379 ---CGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
              CGESHT+ L+  G  VW  GS + G+LG  ED  +     V        +R++  G+
Sbjct: 504 SLECGESHTIALTGAG-AVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGS 562

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL- 487
              +A+   G VF WG      LGL     SF  P  VT L   Q VDV  GD +   + 
Sbjct: 563 KHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFE-PAAVTAL--RQAVDVFCGDDYSACIT 619

Query: 488 -------------SQYNEVYAWGSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
                        +++ +++AWG+   G+   G+D  S  +  P KV     V    +CA
Sbjct: 620 SLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKV-----VFSVPVCA 674

Query: 533 GSLFSIAYTVPPSNSALSSAFTPLC 557
            SL S+   +         +F+PLC
Sbjct: 675 CSLDSL--EMQAYKRVFCVSFSPLC 697


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
           CCMP526]
          Length = 1021

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 130/235 (55%), Gaps = 23/235 (9%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           VT +G++Y+WG G + KLGHG++    RP+ +   L   ++ +V+ G  H+AA+ EDG L
Sbjct: 702 VTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVE-ALQDVKIVKVACGDFHTAAIDEDGRL 760

Query: 344 YTWG-----EGDHGRLGHGDLKSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTV 394
           +TWG      G  G LGHGD   +  P +V  L D    VG+V+CGE HTL+L+ DG  V
Sbjct: 761 WTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGE-V 819

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEAL-RKFRVRKVCAGTSFSVALTWDGLVFWWGLG- 452
            + G+G  G+LG+  +     P+ +E    K  + +V AG +F++ LT DG +F WG   
Sbjct: 820 LTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNE 879

Query: 453 ----LRSSSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
                    IS         P+LV  L S ++V V+ G SH  A+++  E+Y WG
Sbjct: 880 QGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWG 934



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 40/266 (15%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT--------------------LSQ 309
           S + S  S     T+     V++WG G  G+LGH                         Q
Sbjct: 617 STTFSTLSATSSHTIVPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQ 676

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
            + K+     +G     ++AG ++SA VTEDG LYTWG+G + +LGHGD K  + P  V 
Sbjct: 677 DQQKIEKHNPWG--FVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVE 734

Query: 370 ELSDVG--AVSCGESHTLVLSQDGHTVWSMG-----SGNLGKLGHEDTGKVTTPKVIEAL 422
            L DV    V+CG+ HT  + +DG  +W+ G      G +G LGH D  +   PKV+ +L
Sbjct: 735 ALQDVKIVKVACGDFHTAAIDEDGR-LWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSL 793

Query: 423 RKF--RVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH---TPVLVTGLSSHQ 473
             +  RV  V  G   ++ LT DG V   G G    L +   S H    PV +    ++ 
Sbjct: 794 VDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTN- 852

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSN 499
           IV+V+ G +  L L+Q  +++ WG N
Sbjct: 853 IVEVAAGHAFNLVLTQDGKIFTWGRN 878



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 108/232 (46%), Gaps = 28/232 (12%)

Query: 224  IEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
            +  G+  T +L   G +L  G G    LG   ++   +P+ V L     ++       A 
Sbjct: 803  VACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAF 862

Query: 281  VLTVTSEGEVYSWGVGEHGKLGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             L +T +G++++WG  E G+LG G     +  S     L++  L  K+V  V+AGHSHSA
Sbjct: 863  NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSA 922

Query: 336  AVTEDGLLYTWGEGDH-----GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
            AVTE+G LY WG   H      R+G GD               V  V CG SHT V+++D
Sbjct: 923  AVTEEGELYMWGMKIHLEPQVFRVGEGD--------------KVWQVGCGGSHTAVVTED 968

Query: 391  GHTVWSMGSGNLGKLGHEDTGKVTTPKVI-EALRKFRVRKVCAGTSFSVALT 441
             H +++ G G+   LGH        PK++ + L    V KV  G      +T
Sbjct: 969  AHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRHMAVIT 1020



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 164/347 (47%), Gaps = 54/347 (15%)

Query: 174  LTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCT 231
            L Y+ G T+      K+YTWG   +H++         RPR +++L    I  +  G F T
Sbjct: 696  LNYSAGVTE----DGKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDVKIVKVACGDFHT 751

Query: 232  FLLDSTGGLLVYGKGW----------LGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEA 279
              +D  G L  +  GW          LG  +   QP PK  R  ++      SV+ C E 
Sbjct: 752  AAIDEDGRLWTW--GWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVA-CGEK 808

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR--VTQVSAGHSHSAAV 337
            H L +T +GEV + G GE+G+LG+G +     P+ +   L+ ++  + +V+AGH+ +  +
Sbjct: 809  HTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVE--LFDEKTNIVEVAAGHAFNLVL 866

Query: 338  TEDGLLYTWGEGDHGRLGHG-----DLKSRHT-PTLVTEL--SDVGAVSCGESHTLVLSQ 389
            T+DG ++TWG  + G+LG G     D+ S    P LV  L    V  V+ G SH+  +++
Sbjct: 867  TQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTE 926

Query: 390  DGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG-LVF 447
            +G   +W M      K+  E       P+V       +V +V  G S +  +T D   +F
Sbjct: 927  EGELYMWGM------KIHLE-------PQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLF 973

Query: 448  WWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             +G      LG  + S + H  ++  GL+   +V V+ G  H+  ++
Sbjct: 974  TFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRHMAVIT 1020



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 25/281 (8%)

Query: 238 GGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           G L  +G G    LG  ++     P++V     +  + V+ C + H   +  +G +++WG
Sbjct: 706 GKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDVKIVKVA-CGDFHTAAIDEDGRLWTWG 764

Query: 295 -----VGEHGKLGHGNTLSQRRPKLIMGGL-YGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
                 G  G LGHG+   Q RPK++   + YG RV  V+ G  H+  +T+DG + T G 
Sbjct: 765 WGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGN 824

Query: 349 GDHGRLGHGDLKSRHTP---TLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGK 404
           G++GRLG+G       P    L  E +++  V+ G +  LVL+QDG    W         
Sbjct: 825 GEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLG 884

Query: 405 LGHEDTGKV----TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISF 460
           LG   +  V      P ++EAL   +V  V AG S S A+T +G ++ WG+      I  
Sbjct: 885 LGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGM-----KIHL 939

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQ-YNEVYAWGSNT 500
              V   G    ++  V  G SH   +++  ++++ +G  +
Sbjct: 940 EPQVFRVG-EGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGS 979



 Score = 63.2 bits (152), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 38/249 (15%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-------------- 372
           +SA  SH+  +     ++ WG+G  G+LGH  ++         ELS              
Sbjct: 623 LSATSSHT--IVPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQK 680

Query: 373 -------DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
                      ++ G +++  +++DG  +++ G G+  KLGH D+  V  P+ +EAL+  
Sbjct: 681 IEKHNPWGFVDLAAGLNYSAGVTEDG-KLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDV 739

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT----------PVLVTGLSSH--Q 473
           ++ KV  G   + A+  DG ++ WG G                    P +V  L  +  +
Sbjct: 740 KIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCR 799

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVVGLEDVCVRQICA 532
           +  V+ G+ H L L+   EV   G+   G+ G    S+  V +P ++   E   + ++ A
Sbjct: 800 VGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFD-EKTNIVEVAA 858

Query: 533 GSLFSIAYT 541
           G  F++  T
Sbjct: 859 GHAFNLVLT 867



 Score = 48.1 bits (113), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 18/161 (11%)

Query: 188  SKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--------SNIRHIEAGQFCTFLLDSTGG 239
             K++TWG N   Q+            ++++P          + H+ AG   +  +   G 
Sbjct: 870  GKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGE 929

Query: 240  LLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG-EVYSWGVGEH 298
            L ++G          ++P   RV     +  +    C  +H   VT +  +++++G G  
Sbjct: 930  LYMWG------MKIHLEPQVFRVGEGDKVWQVG---CGGSHTAVVTEDAHQLFTFGKGSS 980

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
              LGHG       PKL+  GL G+ V +V+ GH H A +T+
Sbjct: 981  LCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRHMAVITD 1021


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 135/284 (47%), Gaps = 21/284 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG   H  G LG+ N  S   PK + G L G  V  VS G  H
Sbjct: 364 CGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWH 423

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD +S  TP  V  L  +  V  +CG  HT  + +  
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVM 483

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  + AL +    +V  G S +VAL
Sbjct: 484 VGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVAL 543

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       PV V G LS + + ++  G  HV  L+   EVY 
Sbjct: 544 TTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYT 603

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           WG    G+ G  + ++    P+ V  L+D  V+ +  G+ F+ A
Sbjct: 604 WGKGANGRLGHGD-TDDRSSPTIVEALKDKQVKSVVCGTSFTAA 646



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 144/328 (43%), Gaps = 77/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG  L  ++   V      P+L      +N+  +  G++ +  +  +G L  +G
Sbjct: 323 QGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLSGDLYTWG 382

Query: 245 K-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG  N     +PK++  PLE   + ++   C   H   VTS G+++++G G 
Sbjct: 383 GSSHNCGLLGYRNEASNWVPKKLNGPLEG--IHVAAVSCGPWHTAVVTSSGQLFTFGDGT 440

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 441 FGVLGHGDRRSVSTPREVES-LKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 499

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT---------- 393
           WG+GD GRLGHGD +SR  PT V  L   +   V+CG S T+ L+  GH           
Sbjct: 500 WGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQ 559

Query: 394 -----------------------------------------VWSMGSGNLGKLGHEDTGK 412
                                                    V++ G G  G+LGH DT  
Sbjct: 560 LGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD 619

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            ++P ++EAL+  +V+ V  GTSF+ A+
Sbjct: 620 RSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 120/265 (45%), Gaps = 25/265 (9%)

Query: 264 LEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           LE+A++  +    C   H   VT +GEV+SWG    G+LGHG       PKL+  GL   
Sbjct: 299 LESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLV-DGLKNT 357

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---ELSDVGAV 377
            V  V+ G  HS AVT  G LYTWG   H  G LG+ +  S   P  +    E   V AV
Sbjct: 358 NVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAV 417

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           SCG  HT V++  G  +++ G G  G LGH D   V+TP+ +E+L+  R  +   G   +
Sbjct: 418 SCGPWHTAVVTSSGQ-LFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHT 476

Query: 438 VALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIG 480
            A+               G +F WG G +         S   P  V  L       V+ G
Sbjct: 477 AAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACG 536

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCG 505
            S  +AL+    VY  GS   GQ G
Sbjct: 537 HSMTVALTTTGHVYTMGSPVYGQLG 561



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 115/286 (40%), Gaps = 34/286 (11%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR--------VTQVSAGHSHSAAVTE 339
           G+VY WG G  G +  G         +       K         V  ++ G  H+A VT+
Sbjct: 263 GDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESAVLLDVQTIACGRRHAALVTK 322

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHT--LVLSQDGHTVW 395
            G +++WGE   GRLGHG       P LV  L  ++V  V+CGE H+  + LS D +T W
Sbjct: 323 QGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLSGDLYT-W 381

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL- 453
              S N G LG+ +      PK +   L    V  V  G   +  +T  G +F +G G  
Sbjct: 382 GGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTF 441

Query: 454 ----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ------------YNEVYAWG 497
                    S  TP  V  L   + V  + G  H  A+ +              +++ WG
Sbjct: 442 GVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 501

Query: 498 SNTMGQCGQ-DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               G+ G  D  S  V  P+ V  L +    Q+  G   ++A T 
Sbjct: 502 DGDKGRLGHGDKESRLV--PTCVAALVEPNFCQVACGHSMTVALTT 545



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 25/223 (11%)

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE-----------LSDVGAVS 378
           GH  S A+   G +Y WGEG  G +  G +       + T+           L DV  ++
Sbjct: 255 GHDDSDAL---GDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESAVLLDVQTIA 311

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG  H  ++++ G  V+S G    G+LGH     V  PK+++ L+   V  V  G   S 
Sbjct: 312 CGRRHAALVTKQGE-VFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSC 370

Query: 439 ALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           A+T  G ++ WG        LG R+ + ++    L   L    +  VS G  H   ++  
Sbjct: 371 AVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSS 430

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV-CVRQICA 532
            +++ +G  T G  G  +  + V  P +V  L+ +  VR  C 
Sbjct: 431 GQLFTFGDGTFGVLGHGDRRS-VSTPREVESLKGLRTVRAACG 472


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  127 bits (318), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 192/438 (43%), Gaps = 55/438 (12%)

Query: 190 VYTWGCNLHHQILDE---VRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++ WG ++   +LD+    +   S PRL +     +++++  G+    ++   G +  +G
Sbjct: 170 IFVWG-DVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWG 228

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           K   G LG    ++  L  ++    A   +        H   +   GE++ WG G H  L
Sbjct: 229 KEDGGRLG-HKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS-L 286

Query: 302 GHGNTLSQRR---PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G  +   QR    P  + G L G  V +++ G  H+A ++  G L+T+G+G  G LGHGD
Sbjct: 287 GVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD 346

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV---------WSMGSGNLGKLGH 407
             S   P  V  L    V AV+CG  HT  + +   TV         ++ G  + GKLGH
Sbjct: 347 TSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGH 406

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG---LRSSSI 458
            D      P  ++AL      +V    + +VALT  G+VF  G      LG   L  SSI
Sbjct: 407 SDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSI 466

Query: 459 -SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ-- 515
            S   P     L +  + ++S G SHV  L+   +V+ WG  T GQ G  N+   VD+  
Sbjct: 467 CSVEGP-----LKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNY---VDRSS 518

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
           P+ V  LED  V  I  GS F++A  +  S S    +    C         L   F  + 
Sbjct: 519 PTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRC--------RLSFSFARKK 570

Query: 576 SACFETGDYIPFCSKVTH 593
             C+  G    FC+  ++
Sbjct: 571 HNCYNCGSM--FCNSCSN 586


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 22/326 (6%)

Query: 195 CNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLA 251
           C       D      +RP     P  +R + +G+  + L    G +  +G    G LG  
Sbjct: 22  CGAPASSKDAAEAVQARPLRSGSPRAVR-LASGKAHSLLATPDGTVRAWGDNASGQLGDG 80

Query: 252 NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
            TT +  P  VP  A  V++S       + L +  +G V +WG   +G+LG G T  +  
Sbjct: 81  TTTQRSSPTAVPGLAGAVAVS---AGGEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRAS 137

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL 371
           P  + G L G  V  ++AG++H+ A+  DG +  WG   +G+LG G    R TP  V  L
Sbjct: 138 PGAVPG-LSG--VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGL 194

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           + V A++ GE+H+L +  DG TV + G+   G+LG   T + T+P ++ +L    V  + 
Sbjct: 195 TGVVAIAAGENHSLAVLADG-TVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTG--VTAIA 251

Query: 432 AGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
           AG + S+A+  DG V  WG      LG   ++    TPV V GL+   + ++S G  H L
Sbjct: 252 AGANHSLAVLADGTVRAWGYNASGRLG-DGTTTQRATPVAVPGLTG--VTEISAGGGHSL 308

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSN 511
           AL       AWGSN  GQ G    SN
Sbjct: 309 ALLADGTARAWGSNVSGQLGDGTVSN 334



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 177/367 (48%), Gaps = 28/367 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLV 242
           +A      WG N+  Q+ D    + + P    LP  + +  + AG + +  + + G +  
Sbjct: 361 LADGTARAWGANVSGQLGDGTTTQRTLP--VGLPGLTGVAALAAGGYHSLAVLANGTVRA 418

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G    G LG  +T  +  P  VP    +VSL+       H L + S+G V +WG    G
Sbjct: 419 WGHNTYGQLGDGSTAQRTAPVVVPALTGVVSLT---AGYDHSLALLSDGTVRAWGNNASG 475

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH-SHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +LG G T +QR   + + GL    V  +S G   H+ A+  DG +  WG   +G+LG G 
Sbjct: 476 QLGDGTT-NQRGTPVQVSGL--TNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGS 532

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             +R TP  V+ L++V A++ G  ++L L  +G TV S G G  G LG +      TPK 
Sbjct: 533 TSNRWTPVAVSGLTNVVAIAAGGDYSLALQSNG-TVQSWGYGVYGPLGRDYDTYSPTPKA 591

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           +  +    V  + AG +  +AL  DG V+ WG      LG   +++  +TPV V GL+  
Sbjct: 592 VPGVTN--VVAIAAGANHVLALRADGTVYAWGRNDFGQLG-DGTTVQRNTPVQVPGLT-- 646

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
            +V ++ G  H LAL     VYAWG N   Q G  + +N    P+ V GL +V    + A
Sbjct: 647 NVVAIATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVA--VTA 704

Query: 533 GSLFSIA 539
           G   S+A
Sbjct: 705 GGNQSLA 711



 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 171/356 (48%), Gaps = 24/356 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V  WG N + Q+ D    +   P      + +  I AG+  +  + + G +  +G    G
Sbjct: 166 VRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAIAAGENHSLAVLADGTVRAWGNNTYG 225

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT +  P    L +++  ++       H L V ++G V +WG    G+LG G T
Sbjct: 226 RLGDGTTTQRTSPV---LVSSLTGVTAIAAGANHSLAVLADGTVRAWGYNASGRLGDGTT 282

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            +QR   + + GL G  VT++SAG  HS A+  DG    WG    G+LG G + +R +P 
Sbjct: 283 -TQRATPVAVPGLTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPV 339

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           LV+ L+ V A+S G +H+L L  DG T  + G+   G+LG   T + T P  +  L    
Sbjct: 340 LVSSLTGVTALSAGGNHSLALLADG-TARAWGANVSGQLGDGTTTQRTLPVGLPGLTG-- 396

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           V  + AG   S+A+  +G V  WG      LG   S+     PV+V  L+   +V ++ G
Sbjct: 397 VAALAAGGYHSLAVLANGTVRAWGHNTYGQLG-DGSTAQRTAPVVVPALTG--VVSLTAG 453

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
             H LAL     V AWG+N  GQ G D  +N    P +V GL +V    +  G L+
Sbjct: 454 YDHSLALLSDGTVRAWGNNASGQLG-DGTTNQRGTPVQVSGLTNVVA--LSGGKLY 506



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 167/347 (48%), Gaps = 20/347 (5%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +A+  V  WG N + Q+ D    + + P +    + +  + AG   +  L S G +  +G
Sbjct: 411 LANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGVVSLTAGYDHSLALLSDGTVRAWG 470

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG   T  +  P +V     +V+LS  K    H L + S+G V +WG   +G+L
Sbjct: 471 NNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLY--HALALLSDGTVRAWGYNMNGQL 528

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+T S R   + + GL    V  ++AG  +S A+  +G + +WG G +G LG      
Sbjct: 529 GDGST-SNRWTPVAVSGL--TNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTY 585

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
             TP  V  +++V A++ G +H L L  DG TV++ G  + G+LG   T +  TP  +  
Sbjct: 586 SPTPKAVPGVTNVVAIAAGANHVLALRADG-TVYAWGRNDFGQLGDGTTVQRNTPVQVPG 644

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V  +  G   S+AL  DG V+ WG      LG  S++    TP  V GL+   +V
Sbjct: 645 LTN--VVAIATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLT--NVV 700

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            V+ G +  LAL     V+AWG N+ G+ G  +   P   P  V GL
Sbjct: 701 AVTAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLTP-PAPVAVTGL 746


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 155/306 (50%), Gaps = 16/306 (5%)

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQP--LPKRVPLEA 266
           PR+ S    I  +  G   T  +   G L   G    G LG+   ++Q    P+ V   +
Sbjct: 15  PRVCSFQIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALS 74

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKR-- 323
               + VS C  +H   +   GE++SWG    G+LG  +  S   P+L+    L G    
Sbjct: 75  KYKVMQVS-CGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTF 133

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           VT VS G+ H+ AV ++G + ++G G  G+LG G+   ++ P L+  LS +  V CG  H
Sbjct: 134 VTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQIIKVKCGFYH 193

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           TL L + G  V+S G  + G+LG   + G +++P+++  L    ++K+ AG S S A+T 
Sbjct: 194 TLFLDESGR-VYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKKIFAG-SHSAAITD 251

Query: 443 DGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
              ++++G   +S    F  P LV  +    + ++SIG+   +A++   +VY+WG N  G
Sbjct: 252 ANEIYFFG---KSQLGQFLYPQLVR-ICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQG 307

Query: 503 QCGQDN 508
           Q GQ +
Sbjct: 308 QLGQGD 313



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 110/225 (48%), Gaps = 18/225 (8%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD--LKSRHTPTLVTELSD--VGAVSC 379
           + Q++ G  H+A V ++G LYT G    G+LG G   L++   P LV+ LS   V  VSC
Sbjct: 24  IHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSC 83

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI-----EALRKFRVRKVCAGT 434
           G SHT  +   G  ++S G  + G+LG    G    P+++     + +  F V  V  G 
Sbjct: 84  GHSHTCAIIDSGE-LFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTF-VTDVSCGY 141

Query: 435 SFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
             +VA+  +G V  +G G +      +    + P L+  LS  QI+ V  G  H L L +
Sbjct: 142 YHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLS--QIIKVKCGFYHTLFLDE 199

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
              VY+ G N  GQ GQ +    +  P  V+ LE   +++I AGS
Sbjct: 200 SGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKKIFAGS 244



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 56/258 (21%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRL------QSLPSNIRHIEAGQFCTFLLDSTG 238
           +   ++++WG +   Q+     G    P+L      + + + +  +  G + T  +   G
Sbjct: 92  IDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNG 151

Query: 239 GLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
            +  +G   KG LG  N   Q  P  +   + I+ +   KC   H L +   G VYS G+
Sbjct: 152 QVCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQIIKV---KCGFYHTLFLDESGRVYSCGL 208

Query: 296 GEHGKLGHGNT------------LSQRRPKLIMGG-------------LYGKR------- 323
            + G+LG G+             L     K I  G              +GK        
Sbjct: 209 NDEGQLGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQFLY 268

Query: 324 ----------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD 373
                     V ++S G+    AVT DG +Y+WG    G+LG GD   R  P+LV  L++
Sbjct: 269 PQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNE 328

Query: 374 VGAVS--CGESHTLVLSQ 389
              +S  CGE++ + L Q
Sbjct: 329 KKVISATCGENYVICLGQ 346


>gi|355694474|gb|AER99681.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 306

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 13/208 (6%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG--HSHSAAVTEDGLLYTW 346
           E+Y+WG+GE+G+LGHG+  +Q +PK++   L G RV QV+ G   + + A+T++GL+++W
Sbjct: 1   ELYTWGLGEYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSW 59

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G+GD G+LG G  +  + P  +  L+  G   + CG   +L L++ G  VW+ G G+  +
Sbjct: 60  GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG-VVWTWGKGDYFR 118

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           LGH     V  P+V+E LR  ++  V  G    +A+T  G V+ WG       G  ++++
Sbjct: 119 LGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 178

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           +   P LV GL   +I  V+ G SH +A
Sbjct: 179 N-RKPTLVQGLEGQKITRVACGSSHSVA 205



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 13/209 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMG 398
           LYTWG G++GRLGHGD  ++  P +V  L    V  V+CG  ++ TL L+ +G  V+S G
Sbjct: 2   LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWG 60

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----L 453
            G+ GKLG   +     P+ IE L    V ++  G  FS+ALT  G+V+ WG G      
Sbjct: 61  DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 120

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S +    P +V GL   +IV V++G  H LA++   +VYAWG N  GQ  Q N +  V
Sbjct: 121 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ--QGNGTTTV 178

Query: 514 D-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + +P+ V GLE   + ++  GS  S+A+T
Sbjct: 179 NRKPTLVQGLEGQKITRVACGSSHSVAWT 207



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 7/208 (3%)

Query: 237 TGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWGV 295
           T GL  YG+  LG  + T Q  PK V +      + V+  S +A  L +T EG V+SWG 
Sbjct: 4   TWGLGEYGR--LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 61

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           G+ GKLG G +     P+ I   L G+ V Q+  G   S A+T+ G+++TWG+GD+ RLG
Sbjct: 62  GDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 120

Query: 356 HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           HG       P +V  L    +  V+ G  H L ++  G  V++ G  + G+ G+  T   
Sbjct: 121 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQ-VYAWGDNDHGQQGNGTTTVN 179

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALT 441
             P +++ L   ++ +V  G+S SVA T
Sbjct: 180 RKPTLVQGLEGQKITRVACGSSHSVAWT 207


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 156/334 (46%), Gaps = 33/334 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H   V+  GE+Y WG G H  G  G     SQ  P  + G L G  + +++ GH H+A +
Sbjct: 278 HTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAII 337

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV- 394
           +  G ++T+G+G  G LGHGD  +   P  V  L  V   A++CG  HT  + +   TV 
Sbjct: 338 SSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 397

Query: 395 --------WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
                   ++ G  + GKLGH D      P  +E L  F   +V    + ++ LT  G+V
Sbjct: 398 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVV 457

Query: 447 FWWGL---GLRSSSISFHTPV-LVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           F  G    G   + +S  T + L+ G L +  + ++S G SH+  L+   +V+ WG  T 
Sbjct: 458 FTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 517

Query: 502 GQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVD 559
           GQ G  ++   VD+  P+ V  LED  V  I  G  F++A  +   +  LSS    +C +
Sbjct: 518 GQLGLGDY---VDRSYPTLVEALEDKQVHSIACGFNFTMAICL---HRPLSSKDQSVCSN 571

Query: 560 VRPHTFTLIREFLEQYSACFETGDYIPFCSKVTH 593
            +     L   F  +   C+  G    FC+  ++
Sbjct: 572 CQ-----LTFGFTRKKHNCYNCGSM--FCNSCSN 598



 Score =  117 bits (294), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 133/292 (45%), Gaps = 33/292 (11%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           I+ +    C E H   VT +GEV+SWGV   G+LGH  ++S   PK+I   L   RV  +
Sbjct: 214 IIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIE-SLASTRVKAI 272

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTP-TLVTELSDVG--AVSCGES 382
           + G  H+ AV+  G LY WGEG H  G  G    +S+  P  L   L  +    ++CG  
Sbjct: 273 AFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHW 332

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           HT ++S  G  +++ G G  G LGH DT  V  PK +E+L+  R + +  G   + A+  
Sbjct: 333 HTAIISSAGQ-IFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVE 391

Query: 443 ----------DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
                      G +F WG      LG     +    P  V  L+      VS   +  + 
Sbjct: 392 RMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKL-VPTCVEPLNDFDFAQVSCAKAQTIV 450

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC----VRQICAGS 534
           L+    V+  GS   G+ G     NP+ + + +  +E       VR+I +GS
Sbjct: 451 LTITGVVFTIGSKEHGRLG-----NPLSEDTSICLIEGPLKTEFVREISSGS 497



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 14/209 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHT--PTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++ WGE     L HGD+   +   P L+  T + DV +V+CGE H  ++++ G  V+S G
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGE-VFSWG 240

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
             N G+LGH+ +  V+ PK+IE+L   RV+ +  G   + A++  G ++ WG G     +
Sbjct: 241 VDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 300

Query: 459 --------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                    +    L   L    I+ ++ G  H   +S   +++ +G  T G  G  + +
Sbjct: 301 WGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGD-T 359

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             V +P +V  L+ V  + I  G   + A
Sbjct: 360 LTVARPKQVESLKGVRAKAIACGPWHTAA 388



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 11/158 (6%)

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           +G L  +G   +G LG A+  ++ +P  V PL       +   C++A  + +T  G V++
Sbjct: 402 SGKLFTWGDADRGKLGHADKKMKLVPTCVEPLND--FDFAQVSCAKAQTIVLTITGVVFT 459

Query: 293 WGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            G  EHG+LG  N LS+     LI G L  + V ++S+G SH A +T +G ++TWG+G  
Sbjct: 460 IGSKEHGRLG--NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 517

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G+LG GD   R  PTLV  L D  V +++CG + T+ +
Sbjct: 518 GQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 555


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 137/287 (47%), Gaps = 34/287 (11%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-KLI 315
           P P RV          +S C   H L ++ EG +Y+WGVG +G LG G+T     P ++ 
Sbjct: 170 PKPSRVRFRDKCKIARIS-CGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVY 228

Query: 316 MGGLYGKR-----------------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +G   G                   VT  SAG  HS A T DG L+TWG G +GRLG G 
Sbjct: 229 LGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH 288

Query: 359 LKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            +   +P +V  +   D+  V+ G+SH+  + + G  +++ GSG  G+LGH D G++  P
Sbjct: 289 NRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQG-VLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR--------SSSISFHTPVLVTG 468
           + +E      V +V  GT  ++ALT  G VF WG GL          S      P  ++ 
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSD 407

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAW---GSNTMGQCGQDNFSNP 512
           + +  +++++ G  H  A++   ++  W   GS+ +G   Q N   P
Sbjct: 408 IEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFP 453



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 182/427 (42%), Gaps = 64/427 (14%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           ++ +E G+  T  L   G + V+G    G LGL     +   + V LE     +    C 
Sbjct: 502 LQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACG 561

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM----------GGLYGKRVTQV 327
             H L V   G+V++WG  ++G+LG G       P  +           G  Y   +T +
Sbjct: 562 SKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSACITSL 621

Query: 328 SAGHSHSAAV-TEDGLLYTWGEGDHGRLGHG-DLKSRH--TPTLVT-------------E 370
               S S    TE G L+ WG  + G+LG G D+ S    TP  V              E
Sbjct: 622 GGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLE 681

Query: 371 LSDVGAVSC--------GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           +     V C        G SH+L ++  G   ++ G+G  G+LG   T    TP   +  
Sbjct: 682 MQAYKRVFCVSFSPLCSGTSHSLAITAQGE-CYAWGAGYYGRLGIGTTANAYTPTRCDFP 740

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-SSISFHTPVLVTGLSSH----QIVDV 477
           +  R+R V AG   S+AL+ DG +++WG    + S+ ++ +P +   L       ++  +
Sbjct: 741 KGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSI 800

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVC--VRQICAG 533
           S  + H LA+++  EV+AWG N + Q  CG+   +  +D+P +V GL   C  V     G
Sbjct: 801 SASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQ-AERLDRPERVAGLPSACQWVATGPQG 859

Query: 534 SLFSIAYTVPPSNSALSSA------------FTPLCVDVRPHTFTLIREFLE--QYSACF 579
           S F +A     +   + S             F+P+ V      F  +R   E  Q + C 
Sbjct: 860 SFFILASGEVFAAGVIKSGRLGTGWSKRTYQFSPVAVITHWADFGDLRYPGESSQLALC- 918

Query: 580 ETGDYIP 586
           E G+++P
Sbjct: 919 ENGEFLP 925



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 179/445 (40%), Gaps = 97/445 (21%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQS-LPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++TWG   + ++ L   RG  S   +   L  +I  + AG   +  +D  G L  +G G 
Sbjct: 273 LWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGG 332

Query: 248 LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G      Q   P+P++V     +  L V+ C   H L +T +G V++WG G     G G
Sbjct: 333 FGRLGHGDQGEIPVPRKVEGFGGVPVLQVA-CGTFHTLALTHKGTVFAWGAGLALGFGEG 391

Query: 305 NTLSQRRPKLIMGGLYG---------KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              S        GG+             V  ++AG  HSAAVT  G L  WG G   RLG
Sbjct: 392 EDGS--------GGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLG 443

Query: 356 HGDLKSRHTPTLVTELSDVGAVS------------------------------------- 378
           HGD +++  P  V +L +   VS                                     
Sbjct: 444 HGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQ 503

Query: 379 ---CGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
              CGESHT+ L+  G  VW  GS + G+LG  ED  +     V        +R++  G+
Sbjct: 504 SLECGESHTIALTGAG-AVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGS 562

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL- 487
              +A+   G VF WG      LGL     SF  P  VT L   Q VDV  GD +   + 
Sbjct: 563 KHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFE-PAAVTAL--RQAVDVFCGDDYSACIT 619

Query: 488 -------------SQYNEVYAWGSNTMGQ--CGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
                        +++ +++AWG+   G+   G+D  S  +  P KV     V    +CA
Sbjct: 620 SLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKV-----VFSVPVCA 674

Query: 533 GSLFSIAYTVPPSNSALSSAFTPLC 557
            SL S+   +         +F+PLC
Sbjct: 675 CSLDSL--EMQAYKRVFCVSFSPLC 697


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H   V  +G VY+ G  + G+LGH    S+++P+ + G L  + +  VS G +H+ 
Sbjct: 41  CGNRHTGFVLDDGTVYTCGCNDLGQLGHDK--SRKKPEQV-GALDAQIIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +++WG   HG++G    +     P  +  LSD+    V+CG  H+L LS++ +
Sbjct: 98  ALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            ++S G    G+LG   +  K + P+ I++L       + AG   S ALT  G +F WG 
Sbjct: 158 -IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +     P L+  L S +I+ +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDET-DRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ V+ P KV  L    V QI  G   ++A+ VP S    S
Sbjct: 276 HNSASHEVN-PRKVFELMGNIVTQIACGRQHTLAF-VPSSGRIYS 318



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 124/265 (46%), Gaps = 26/265 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       +  RR    +     K V  V  G+ H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFIN----KNVRDVGCGNRHTGFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L    + AVSCGE+HTL L+  G  V+S G    G++
Sbjct: 60  CNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQ-VFSWGHAAHGQI 116

Query: 406 G---HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G    ED  +V  P+ I++L   ++ +V  G   S+AL+ +  ++ WG      LGL S 
Sbjct: 117 GVSIAEDYIRV--PRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSE 174

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                 P  +  LS      ++ G  H  AL+    ++ WG N  GQ G ++ ++  D P
Sbjct: 175 KRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD-P 233

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           + +  L    +  IC G   + A T
Sbjct: 234 ALLKSLRSQKIIYICCGEDHTAALT 258



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI-RHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           VYT GCN   Q L   + +    ++ +L + I   +  G+  T  L+  G +  +G    
Sbjct: 55  VYTCGCNDLGQ-LGHDKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAH 113

Query: 249 GLANTTIQPLPKRVPLEAAIVS---LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G    +I     RVP     +S   +    C   H L ++ E  +YSWG  ++G+LG G+
Sbjct: 114 GQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGS 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              +      +  L G     ++AG  HS A+T  G ++ WG    G+LG  D   R  P
Sbjct: 174 EKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH        P+ +  L 
Sbjct: 234 ALLKSLRSQKIIYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292

Query: 424 KFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
              V ++  G   ++A     G ++ +GLG
Sbjct: 293 GNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGDL------KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G +      + R     + +  +V  V CG  HT  +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--NVRDVGCGNRHTGFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            G  +LG+LGH+ + K   P+ + AL    +  V  G + ++AL   G VF WG      
Sbjct: 58  CGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           +G+  +      P  +  LS  QIV V+ G  H LALS+ + +Y+WG N  GQ G  +  
Sbjct: 116 IGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEK 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +    I AG   S A T+
Sbjct: 176 RKESAPRHIKSLSGIPFAHIAAGGGHSFALTI 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V++WG   H QI   +     R PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL +   +    R     + +  +       H   +T  G ++ WG  + G+L
Sbjct: 163 QNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLNDETDRSDPALLKS-LRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASH 281

Query: 362 RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL    V  ++CG  HTL        ++S G G  G+LG   T    +P ++
Sbjct: 282 EVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 31/286 (10%)

Query: 240 LLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSK-----CSEAHVLTVTSE 287
           + +Y  GW     LG  N++    P P        IV+L   K     C ++H LTVT  
Sbjct: 93  MQLYSWGWGDFGRLGHGNSSDVFNPQP--------IVALQGMKIKQIACGDSHCLTVTFN 144

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G+V+SWG  ++G+LG GN      P+ I     G  V  ++AG  H+ A+TE G LY WG
Sbjct: 145 GQVHSWGRNQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWG 203

Query: 348 EGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            G +G LG  D   R  P  V+  E   +  V+CG  H++ +S  G  +++ G    G+L
Sbjct: 204 WGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSG-ALYTYGWSKYGQL 262

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           GH D      P+ +EAL+   + ++  G   ++A+  DG ++ WG      +G+  + + 
Sbjct: 263 GHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN-VD 321

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             +PV V      +IV V+ G  H LAL++   +++WG    GQ G
Sbjct: 322 HCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLG 367



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 134/269 (49%), Gaps = 13/269 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVT 338
           H   + S   V SWG GE G+LGHG+  S+ RP   ++      RVT V  G  H+ A +
Sbjct: 32  HSAALLSGQMVCSWGRGEDGQLGHGD--SEDRPVPTVLTSFDVPRVTSVICGADHTIAYS 89

Query: 339 EDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
           +D + LY+WG GD GRLGHG+      P  +  L    +  ++CG+SH L ++ +G  V 
Sbjct: 90  DDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQ-VH 148

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR- 454
           S G    G+LG  +      P+ I+A     V+ + AG   + A+T  G ++ WG G   
Sbjct: 149 SWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYG 208

Query: 455 ----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
               S       P  V+ +   ++V V+ G  H +++S    +Y +G +  GQ G  +F 
Sbjct: 209 NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           + +  P K+  L+DV + QI  G   ++A
Sbjct: 269 DHL-VPRKLEALKDVPISQISGGWRHTMA 296



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSC 379
           + V  +SAG +HSAA+    ++ +WG G+ G+LGHGD + R  PT++T  ++  V +V C
Sbjct: 21  QSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVIC 80

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  S D   ++S G G+ G+LGH ++  V  P+ I AL+  +++++  G S  + 
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLT 140

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T++G V  WG      LGL ++  S   P  +       +  ++ G  H  A+++  ++
Sbjct: 141 VTFNGQVHSWGRNQNGQLGLGNNQDSL-LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDL 199

Query: 494 YAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLE 523
           Y WG    G  G    S+  D+  P KV  +E
Sbjct: 200 YGWGWGRYGNLG---LSDRDDRSVPEKVSSVE 228



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 155/334 (46%), Gaps = 23/334 (6%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS----KVYTWGCN----LHHQILDEVR 206
           GD +     T + S   P++T  I   D ++A+S    ++Y+WG      L H    +V 
Sbjct: 56  GDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVF 115

Query: 207 GKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP 263
                  LQ +   I+ I  G      +   G +  +G+   G LGL N     LP+++ 
Sbjct: 116 NPQPIVALQGM--KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIK 173

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               +    ++  +E H   +T  G++Y WG G +G LG  +   +  P+ +   + G++
Sbjct: 174 AFEGVCVKMIAAGAE-HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSS-VEGEK 231

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGE 381
           +  V+ G  HS +V+  G LYT+G   +G+LGHGD +    P  +  L DV    +S G 
Sbjct: 232 MVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGW 291

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            HT+ +++DG  ++  G    G++G ED     +P  +    + ++ +V  G   ++ALT
Sbjct: 292 RHTMAVAEDG-KLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALT 350

Query: 442 WDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
            +  +F WG G          I  +TP ++  LS
Sbjct: 351 ENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 24/310 (7%)

Query: 246 GWLGLANTTIQPLPK-----RVPLEAAIVSLSVSKCSEAHVLTVTS-EGEVYSWGVGEHG 299
           G LG  ++  +P+P       VP   +++      C   H +  +  E ++YSWG G+ G
Sbjct: 51  GQLGHGDSEDRPVPTVLTSFDVPRVTSVI------CGADHTIAYSDDEMQLYSWGWGDFG 104

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHGN+     P+ I+  L G ++ Q++ G SH   VT +G +++WG   +G+LG G+ 
Sbjct: 105 RLGHGNSSDVFNPQPIVA-LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNN 163

Query: 360 KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
           +    P  +     V    ++ G  HT  +++ G  ++  G G  G LG  D    + P+
Sbjct: 164 QDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGG-DLYGWGWGRYGNLGLSDRDDRSVPE 222

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSH 472
            + ++   ++  V  G   SV+++  G ++ +G      L       H  P  +  L   
Sbjct: 223 KVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV 282

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSNPVDQPSKVVGLEDVCVRQIC 531
            I  +S G  H +A+++  ++Y WG N  GQ G +DN  +    P +V   ++  + Q+ 
Sbjct: 283 PISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHC--SPVEVNFPDEQKIVQVA 340

Query: 532 AGSLFSIAYT 541
            G   ++A T
Sbjct: 341 CGWRHTLALT 350


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 185/399 (46%), Gaps = 28/399 (7%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVR-GKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
           ++++   V+ WG N   Q+ + +  G  + P ++Q L   +  + AG   +  L S G L
Sbjct: 212 VALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGL-RGVMAVAAGGLYSLALRSDGTL 270

Query: 241 LVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G    G  G  +T       RV   + +V+++      AH L V S+G +++WG   
Sbjct: 271 WAWGSNDHGQRGDGSTVYLSSSVRVRWLSGVVAMA---AGSAHSLAVRSDGTLWAWGANY 327

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +G+LG G       PK + G L   RV  V+AG  HS A+  DG ++TWG    G+L HG
Sbjct: 328 YGQLGDGTRKDHDTPKRVQG-L--SRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHG 384

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
                  P  V ELS V AV+ G  H+L +  DG +VW+ G    G+LG         P 
Sbjct: 385 STNDSPVPLHVRELSGVVAVAAGALHSLAVLSDG-SVWAWGYNRQGQLGDGSLSSSAEPV 443

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
            ++ L    V  V AG + S+A   DG V+ WG      LG  ++S +   PV V GLS 
Sbjct: 444 RVQGLSG--VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNAL-VPVRVRGLSG 500

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +  +S G +H LA +    ++AWG N  GQ G    SN    P +V GL  V    + 
Sbjct: 501 --VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNS-SVPVRVQGLSGVAA--VF 555

Query: 532 AGSLFSIAYTVPPSNSALS-SAFTPLCVDVRPHTFTLIR 569
           AG   S+A     S  A   ++F  L       +F  +R
Sbjct: 556 AGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVR 594



 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 171/367 (46%), Gaps = 40/367 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQS-----LPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++ WG N H Q     RG  S   L S       S +  + AG   +  + S G L  +G
Sbjct: 270 LWAWGSNDHGQ-----RGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWG 324

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG         PKRV   + +V+++     + H + + ++G V++WG    G+L
Sbjct: 325 ANYYGQLGDGTRKDHDTPKRVQGLSRVVAVA---AGDGHSIALCADGTVWTWGYNHDGQL 381

Query: 302 GHGNTLSQRRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            HG+T     P   + + G      V  V+AG  HS AV  DG ++ WG    G+LG G 
Sbjct: 382 AHGSTNDSPVPLHVRELSG------VVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGS 435

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
           L S   P  V  LS V AVS G +H+L    DG  VW+ G  + G+LG   T     P  
Sbjct: 436 LSSSAEPVRVQGLSGVAAVSAGLNHSLARGTDG-GVWAWGGNSFGQLGEGTTSNALVPVR 494

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           +  L    V  + AG + S+A   DG ++ WG      LG  ++S S   PV V GLS  
Sbjct: 495 VRGLSG--VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNS-SVPVRVQGLSG- 550

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
            +  V  G +H LA+     V+AWG N+ GQ G+   +N    P +V GL    +  + A
Sbjct: 551 -VAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGE-GTTNTSFAPVRVQGLS--GMETVAA 606

Query: 533 GSLFSIA 539
           GSL S++
Sbjct: 607 GSLHSLS 613



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 177/366 (48%), Gaps = 35/366 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   Q+ D      S P R++ L S +  + AG+  +  L   G +  +G    
Sbjct: 17  VWAWGGNALGQLGDGSSDSHSEPVRVRGL-SGVVAVSAGEGHSLALHRDGTVWAWGDNAL 75

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG--- 302
           G LG   +     P RVP  + +V++S     + H L + S+G V++WG     +LG   
Sbjct: 76  GQLGDGTSDSHSEPVRVPGLSGVVAVS---AGDNHSLALRSDGSVWAWGDNNSDQLGGAP 132

Query: 303 --HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD-L 359
                ++  R   L         V  V+AG +HS AV  DG ++ WG+   G+LG G+ L
Sbjct: 133 GAQSYSVPWRLEDL-------SEVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNIL 185

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
            +R  P  V  LS V A S G +H++V   DG +VW+ G+   G+LG+    G    P+ 
Sbjct: 186 TTRWLPKQVQGLSGVVAASAGWAHSMVALSDG-SVWAWGNNTSGQLGNGISVGYGALPEQ 244

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---GLR--SSSISFHTPVLVTGLSSHQ 473
           ++ LR   V  V AG  +S+AL  DG ++ WG    G R   S++   + V V  LS   
Sbjct: 245 VQGLRG--VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLSG-- 300

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           +V ++ G +H LA+     ++AWG+N  GQ G D      D P +V GL  V    + AG
Sbjct: 301 VVAMAAGSAHSLAVRSDGTLWAWGANYYGQLG-DGTRKDHDTPKRVQGLSRVVA--VAAG 357

Query: 534 SLFSIA 539
              SIA
Sbjct: 358 DGHSIA 363



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 178/375 (47%), Gaps = 46/375 (12%)

Query: 186 AHSKVYTWGCNLHHQILDE--VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           A   V+ WG N   Q+ D   +  +    ++Q L S +    AG   + +  S G +  +
Sbjct: 164 ADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGL-SGVVAASAGWAHSMVALSDGSVWAW 222

Query: 244 GKGWLGLANTTIQ----------PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           G       NT+ Q           LP++V     +++++       + L + S+G +++W
Sbjct: 223 GN------NTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGL---YSLALRSDGTLWAW 273

Query: 294 GVGEHGKLGHGNTL---SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           G  +HG+ G G+T+   S  R + + G      V  ++AG +HS AV  DG L+ WG   
Sbjct: 274 GSNDHGQRGDGSTVYLSSSVRVRWLSG------VVAMAAGSAHSLAVRSDGTLWAWGANY 327

Query: 351 HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           +G+LG G  K   TP  V  LS V AV+ G+ H++ L  DG TVW+ G  + G+L H  T
Sbjct: 328 YGQLGDGTRKDHDTPKRVQGLSRVVAVAAGDGHSIALCADG-TVWTWGYNHDGQLAHGST 386

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
                P  +  L    V  V AG   S+A+  DG V+ WG      LG  S S S   PV
Sbjct: 387 NDSPVPLHVRELSG--VVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAE-PV 443

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
            V GLS   +  VS G +H LA      V+AWG N+ GQ G+   SN +  P +V GL  
Sbjct: 444 RVQGLSG--VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNAL-VPVRVRGLS- 499

Query: 525 VCVRQICAGSLFSIA 539
             V  I AG   S+A
Sbjct: 500 -GVETISAGFNHSLA 513



 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 160/327 (48%), Gaps = 23/327 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           ++ WG N + Q+ D  R     P R+Q L S +  + AG   +  L + G +  +G    
Sbjct: 320 LWAWGANYYGQLGDGTRKDHDTPKRVQGL-SRVVAVAAGDGHSIALCADGTVWTWGYNHD 378

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G L   +T   P+P  V   + +V+++       H L V S+G V++WG    G+LG G+
Sbjct: 379 GQLAHGSTNDSPVPLHVRELSGVVAVAAGAL---HSLAVLSDGSVWAWGYNRQGQLGDGS 435

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
             S   P  + G L G  V  VSAG +HS A   DG ++ WG    G+LG G   +   P
Sbjct: 436 LSSSAEPVRVQG-LSG--VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALVP 492

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V  +S G +H+L  + DG  +W+ G    G+LG   T   + P  ++ L   
Sbjct: 493 VRVRGLSGVETISAGFNHSLARASDG-GLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSG- 550

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V  V AG + S+A+  DG V+ WG      LG  +++ SF  PV V GLS  + V  + 
Sbjct: 551 -VAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSF-APVRVQGLSGMETV--AA 606

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           G  H L++     +++WG+N  GQ G 
Sbjct: 607 GSLHSLSVGSDGSMWSWGNNHHGQLGH 633



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 134/267 (50%), Gaps = 17/267 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +  +G V++WG    G+LG G++ S   P  + G L G  V  VSAG  HS A+  
Sbjct: 7   HSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRG-LSG--VVAVSAGEGHSLALHR 63

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG+   G+LG G   S   P  V  LS V AVS G++H+L L  DG +VW+ G 
Sbjct: 64  DGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLSGVVAVSAGDNHSLALRSDG-SVWAWGD 122

Query: 400 GNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            N  +LG     +  + P  +E L +  V  V AG + S+A+  DG V+ WG      LG
Sbjct: 123 NNSDQLGGAPGAQSYSVPWRLEDLSE--VVAVAAGGNHSLAVRADGTVWAWGDNFAGQLG 180

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
             +   +   P  V GLS   +V  S G +H +       V+AWG+NT GQ G       
Sbjct: 181 DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGY 238

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
              P +V GL  V    + AG L+S+A
Sbjct: 239 GALPEQVQGLRGVMA--VAAGGLYSLA 263



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 103/207 (49%), Gaps = 11/207 (5%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           ++AG  HS A+  DG ++ WG    G+LG G   S   P  V  LS V AVS GE H+L 
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSGVVAVSAGEGHSLA 60

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L +DG TVW+ G   LG+LG   +   + P  +  L    V  V AG + S+AL  DG V
Sbjct: 61  LHRDG-TVWAWGDNALGQLGDGTSDSHSEPVRVPGLSG--VVAVSAGDNHSLALRSDGSV 117

Query: 447 FWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           + WG      LG    + S+  P  +  LS  ++V V+ G +H LA+     V+AWG N 
Sbjct: 118 WAWGDNNSDQLGGAPGAQSYSVPWRLEDLS--EVVAVAAGGNHSLAVRADGTVWAWGDNF 175

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCV 527
            GQ G  N       P +V GL  V  
Sbjct: 176 AGQLGDGNILTTRWLPKQVQGLSGVVA 202



 Score = 89.7 bits (221), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 113/233 (48%), Gaps = 12/233 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+ WG N   Q+ D      + P R+Q L S +  + AG   +    + GG+  +G  
Sbjct: 418 GSVWAWGYNRQGQLGDGSLSSSAEPVRVQGL-SGVAAVSAGLNHSLARGTDGGVWAWGGN 476

Query: 246 --GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG   T+   +P RV   + + ++S       H L   S+G +++WG    G+LG 
Sbjct: 477 SFGQLGEGTTSNALVPVRVRGLSGVETISAGFN---HSLARASDGGLWAWGGNYTGQLGD 533

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T +   P  + G L G  V  V AG +HS AV  DG ++ WG    G+LG G   +  
Sbjct: 534 GTTSNSSVPVRVQG-LSG--VAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSF 590

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            P  V  LS +  V+ G  H+L +  DG ++WS G+ + G+LGH   G+  TP
Sbjct: 591 APVRVQGLSGMETVAAGSLHSLSVGSDG-SMWSWGNNHHGQLGHGLPGRSPTP 642



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 12/268 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           A   V+TWG N   Q+          P      S +  + AG   +  + S G +  +G 
Sbjct: 366 ADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGY 425

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             +G LG  + +    P RV   + + ++S       H L   ++G V++WG    G+LG
Sbjct: 426 NRQGQLGDGSLSSSAEPVRVQGLSGVAAVSAGLN---HSLARGTDGGVWAWGGNSFGQLG 482

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T +   P  + G L G  V  +SAG +HS A   DG L+ WG    G+LG G   + 
Sbjct: 483 EGTTSNALVPVRVRG-LSG--VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNS 539

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  V  LS V AV  G +H+L +  DG +VW+ G  + G+LG   T     P  ++ L
Sbjct: 540 SVPVRVQGLSGVAAVFAGLNHSLAVRTDG-SVWAWGINSFGQLGEGTTNTSFAPVRVQGL 598

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG 450
                  V AG+  S+++  DG ++ WG
Sbjct: 599 SGMET--VAAGSLHSLSVGSDGSMWSWG 624



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+ WG N   Q+ +        P R++ L S +  I AG   +    S GGL  +G  
Sbjct: 468 GGVWAWGGNSFGQLGEGTTSNALVPVRVRGL-SGVETISAGFNHSLARASDGGLWAWGGN 526

Query: 246 --GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG   T+   +P RV   + + ++        H L V ++G V++WG+   G+LG 
Sbjct: 527 YTGQLGDGTTSNSSVPVRVQGLSGVAAVFAGLN---HSLAVRTDGSVWAWGINSFGQLGE 583

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T +   P  + G L G     V+AG  HS +V  DG +++WG   HG+LGHG L  R 
Sbjct: 584 GTTNTSFAPVRVQG-LSGMET--VAAGSLHSLSVGSDGSMWSWGNNHHGQLGHG-LPGR- 638

Query: 364 TPTLVTEL 371
           +PT V  L
Sbjct: 639 SPTPVRSL 646


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 150/329 (45%), Gaps = 21/329 (6%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVS 270
           SL + ++ +  G   T  L   G   VY  GW     LG ++    P P     E  I  
Sbjct: 31  SLATCVKEVACGGKHTLFLMEDGQ--VYSCGWNGEGQLGHSHEGTHPAPVATLAEEHIKH 88

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           ++   C ++H L ++ +G +YSWG G  G+LGH       R   I+  L  +++ Q+S G
Sbjct: 89  IA---CGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCG 145

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDV--GAVSCGESHTLVL 387
             H  A+ +DG L+TWG+  HG+LG G+   S+ +P  V  L  +    V+ G SH+  L
Sbjct: 146 DDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL 205

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           S  G  V+  G  + G+LG  D     TP  ++ LR  +V  +  G   +  LT  G +F
Sbjct: 206 SLSG-AVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLF 264

Query: 448 WWGLGLRS--SSISFH---TPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTM 501
            +G G        S H    P  V  L   ++  ++ G  H LA       +YA+G   +
Sbjct: 265 TFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDL 324

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
           GQ G  +  N V  P+ V G    C  QI
Sbjct: 325 GQLGTGH-ENNVKCPTVVKGKWASCSGQI 352



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 15/275 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            +VY+ G N   Q+     G    P       +I+HI  GQ  +  L   G L  +G G 
Sbjct: 53  GQVYSCGWNGEGQLGHSHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGN 112

Query: 248 LG-LANTTIQPLPKRVPLEAAIVSLSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G L + T++    R+P    I  LS  K     C + H L +  +G++++WG   HG+L
Sbjct: 113 DGQLGHATVEHY-SRIP--RIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQL 169

Query: 302 GHGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           G GN  +SQ  P+ +   L G  + QV+AG SHS A++  G ++ WG+   G+LG  D +
Sbjct: 170 GLGNGFISQSSPQKVK-SLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQ 228

Query: 361 SRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            + TP  V  L    V  +SCGE HT +L++ G  +++ G+G  G+LGH+       P+ 
Sbjct: 229 VKETPCHVKPLRTHKVVYISCGEEHTAILTKAG-GLFTFGAGGSGQLGHDSLHNEINPRR 287

Query: 419 IEALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
           +  L    V ++  G   ++A     G ++ +G G
Sbjct: 288 VLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCG 322



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+LG+G++L      P      L    V +V+ G  H+  + EDG +Y+ G   
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSL-ATCVKEVACGGKHTLFLMEDGQVYSCGWNG 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            G+LGH    +   P        +  ++CG+SH+L LS  G+ ++S G+GN G+LGH   
Sbjct: 63  EGQLGHSHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGN-LYSWGAGNDGQLGHATV 121

Query: 411 GKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTP 463
              +  P++I+ L + +++++  G    +AL  DG +F WG      LGL +  IS  +P
Sbjct: 122 EHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSP 181

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             V  L    +  V+ G SH  ALS    V+ WG N+ GQ G ++
Sbjct: 182 QKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLND 226



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 343 LYTWGEGDHGRLGHG-DLKSRHTPTLVTELS---DVGAVSCGESHTLVLSQDGHTVWSMG 398
           +  WG    G+LG+G  LK+  +       S    V  V+CG  HTL L +DG  V+S G
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQ-VYSCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LR 454
               G+LGH   G  T P  +  L +  ++ +  G S S+AL+  G ++ WG G    L 
Sbjct: 60  WNGEGQLGHSHEG--THPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG 117

Query: 455 SSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
            +++  ++  P ++  LS  +I  +S GD H LAL    +++ WG NT GQ G  N    
Sbjct: 118 HATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFIS 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P KV  LE + + Q+ AG   S A ++
Sbjct: 178 QSSPQKVKSLEGIPLAQVTAGGSHSFALSL 207


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    +++RP+ + G L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--ARKRPEHV-GALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LS++    V+CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  K  +P VI++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + ++V +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDDNDRY-VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSLVTQITCGRQHTTAF-VPSSGRIYS 318



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 13/272 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG--- 244
           VYT GCN   Q+  E   K  RP  + +L + NI  +  G+  T  L+  G +  +G   
Sbjct: 55  VYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT 112

Query: 245 KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G LGL  T     +P+ +   + I  + V+ C   H L ++   EV+SWG  ++G+LG 
Sbjct: 113 DGQLGLPGTEECIRVPRNIKSLSEIQIVQVA-CGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G    ++    ++  L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            PTL+  L    V  + CGE HT  L+++G  V++ G+G  G+LGH  T     P+ +  
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 422 LRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
           L    V ++  G   + A     G ++ +GLG
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 20/262 (7%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KR+  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLN----KRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLGKL 405
             D G+LGH   + R       +  ++ AVSCGE+HTL L+  G    W + + G LG  
Sbjct: 60  CNDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G E+  +V  P+ I++L + ++ +V  G   S+AL+    VF WG      LGL      
Sbjct: 120 GTEECIRV--PRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
            ++P ++  L       ++ G +H   L+    ++ WG N  GQ G ++  N    P+ +
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-DNDRYVPTLL 236

Query: 520 VGLEDVCVRQICAGSLFSIAYT 541
             L    V  IC G   + A T
Sbjct: 237 KSLRTQKVVHICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE   K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            + P  +  L  +   QI AG   S   T+
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG     Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL     +     V      +  +      AH   +T  G ++ WG  + G+L
Sbjct: 163 QNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L +  L  ++V  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLNDDNDRYVPTL-LKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  +
Sbjct: 282 EINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 25/291 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 495 CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGES 548

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 549 HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 608

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 609 DGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 667

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 668 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 726

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF 553
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP  +S L  AF
Sbjct: 727 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VP--SSGLIYAF 773



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 545 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 603

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 604 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSG 663

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 664 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 722

Query: 452 G----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 723 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 782

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 783 TGHTCN-VKCPSPVKG 797



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G  + L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQ-VCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNT 516

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 517 KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 574

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 575 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 632

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 633 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 677



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 9/175 (5%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL    +  V  G
Sbjct: 490 VKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGALADQHIVHVACG 546

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ VS G+ H LAL
Sbjct: 547 ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL 606

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           +   + + WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 607 AADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 661



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 574 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 633

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 634 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 693

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 694 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 751

Query: 326 QVSAGHSHSAA-VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 752 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 795



 Score = 47.0 bits (110), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 665 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 724

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 725 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 783

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 784 GHTCNVKCPSPVKG 797


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 20/269 (7%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRR--PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +Y WG   HG+LG G    ++   P+  M       V +V  G SH+  +T++G +Y  G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRK-MDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 348 EGDHGRLGHG-DLKSRHTPTL-----VTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
             DHG+LGH  D      P +     +T L +  +  +SCG +H+L L+  G  V+S GS
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ-VFSWGS 120

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
             +G+LGH+ + G+  TP++I+A+    V ++ +G    +ALT +G ++ WG      LG
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           + ++S     P L+  L+   I  ++ G +H  A+S+   ++ WG NT GQ G ++  N 
Sbjct: 181 IGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL-NS 239

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              P+++  L  + VR I  G  FS+  T
Sbjct: 240 RCYPTQLRTLRSLGVRYISCGDDFSVFLT 268



 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 156/312 (50%), Gaps = 21/312 (6%)

Query: 246 GWLGLANTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL     + +  P+++    A   + V +C  +H L +T EG++Y+ G  +HG+LGH
Sbjct: 12  GELGLGGIEEEQVMVPRKMDWSQADEVVRV-ECGTSHTLFLTKEGKMYACGNNDHGQLGH 70

Query: 304 G-NTLSQRRPKLI----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
             +TL  +RP++     +  L    +T +S G +HS A+T  G +++WG    G+LGH  
Sbjct: 71  DLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA 130

Query: 359 LKSRH-TPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVT 414
              R  TP ++  +    V  ++ G+ H L L+ +G  +++ GS + G+LG   T  KV 
Sbjct: 131 ENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGE-LYAWGSNSYGQLGIGTTSEKVP 189

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
            P +I++L    +  +  G + S A++  G +F WG      LGL   + S   P  +  
Sbjct: 190 MPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN-SRCYPTQLRT 248

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L S  +  +S GD   + L+    V+  G+ T GQ G  + SN +  P KV  L    + 
Sbjct: 249 LRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEI-VPRKVFELMGSKIT 307

Query: 529 QICAGSLFSIAY 540
           QI  G   ++A+
Sbjct: 308 QIACGRRHTLAF 319



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 17/281 (6%)

Query: 187 HSKVYTWGCNLHHQI------LDEVRGKCSR-PRLQSLPSNI-RHIEAGQFCTFLLDSTG 238
             K+Y  G N H Q+      L   R + SR  RL SL + I   I  G   +  L + G
Sbjct: 54  EGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWG 113

Query: 239 GLLVYGKGWLGL----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +  +G   +G     A    QP P+ +    A   + ++   + H L +T+ GE+Y+WG
Sbjct: 114 QVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIAS-GQYHCLALTNNGELYAWG 172

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
              +G+LG G T  +     ++  L G  +  ++ G +HS AV++ G ++ WG+   G+L
Sbjct: 173 SNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 232

Query: 355 GHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G  DL SR  PT +  L  +G   +SCG+  ++ L+ +G  V++ G+G  G+LGH     
Sbjct: 233 GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEG-GVFTCGAGTFGQLGHGSCSN 291

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
              P+ +  L   ++ ++  G   ++A     G ++ +GLG
Sbjct: 292 EIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLG 332


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    +++RP+ + G L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--ARKRPEHV-GALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LS++    V+CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  K  +P VI++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + ++V +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDDNDRY-VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSLVTQITCGRQHTTAF-VPSSGRIYS 318



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 13/272 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG--- 244
           VYT GCN   Q+  E   K  RP  + +L + NI  +  G+  T  L+  G +  +G   
Sbjct: 55  VYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT 112

Query: 245 KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G LGL  T     +P+ +   + I  + V+ C   H L ++   EV+SWG  ++G+LG 
Sbjct: 113 DGQLGLPGTEECIRVPRNIKSLSEIQIVQVA-CGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G    ++    ++  L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            PTL+  L    V  + CGE HT  L+++G  V++ G+G  G+LGH  T     P+ +  
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 422 LRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
           L    V ++  G   + A     G ++ +GLG
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 20/262 (7%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KR+  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLN----KRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLGKL 405
             D G+LGH   + R       +  ++ AVSCGE+HTL L+  G    W + + G LG  
Sbjct: 60  CNDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G E+  +V  P+ I++L + ++ +V  G   S+AL+    VF WG      LGL      
Sbjct: 120 GTEECIRV--PRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
            ++P ++  L       ++ G +H   L+    ++ WG N  GQ G ++  N    P+ +
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-DNDRYVPTLL 236

Query: 520 VGLEDVCVRQICAGSLFSIAYT 541
             L    V  IC G   + A T
Sbjct: 237 KSLRTQKVVHICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE   K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            + P  +  L  +   QI AG   S   T+
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG     Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL     +     V      +  +      AH   +T  G ++ WG  + G+L
Sbjct: 163 QNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L +  L  ++V  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLNDDNDRYVPTL-LKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  +
Sbjct: 282 EINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    +++RP+ + G L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--ARKRPEHV-GALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LS++    V+CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  K  +P VI++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + ++V +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDDNDRY-VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSLVTQITCGRQHTTAF-VPSSGRIYS 318



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 134/272 (49%), Gaps = 13/272 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG--- 244
           VYT GCN   Q+  E   K  RP  + +L + NI  +  G+  T  L+  G +  +G   
Sbjct: 55  VYTCGCNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLAT 112

Query: 245 KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            G LGL  T     +P+ +   + I  + V+ C   H L ++   EV+SWG  ++G+LG 
Sbjct: 113 DGQLGLPGTEECIRVPRNIKSLSEIQIVQVA-CGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G    ++    ++  L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            PTL+  L    V  + CGE HT  L+++G  V++ G+G  G+LGH  T     P+ +  
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFE 290

Query: 422 LRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
           L    V ++  G   + A     G ++ +GLG
Sbjct: 291 LMGSLVTQITCGRQHTTAFVPSSGRIYSFGLG 322



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 20/262 (7%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KR+  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLN----KRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLGKL 405
             D G+LGH   + R       +  ++ AVSCGE+HTL L+  G    W + + G LG  
Sbjct: 60  CNDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLP 119

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G E+  +V  P+ I++L + ++ +V  G   S+AL+    VF WG      LGL      
Sbjct: 120 GTEECIRV--PRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
            ++P ++  L       ++ G +H   L+    ++ WG N  GQ G ++  N    P+ +
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-DNDRYVPTLL 236

Query: 520 VGLEDVCVRQICAGSLFSIAYT 541
             L    V  IC G   + A T
Sbjct: 237 KSLRTQKVVHICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE   K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            + P  +  L  +   QI AG   S   T+
Sbjct: 178 QNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG     Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL     +     V      +  +      AH   +T  G ++ WG  + G+L
Sbjct: 163 QNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L +  L  ++V  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLNDDNDRYVPTL-LKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  +
Sbjct: 282 EINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 149/281 (53%), Gaps = 17/281 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH    +Q  P+ I G L  + +  V+ G SHS 
Sbjct: 41  CGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ--PEQI-GALADQHIIHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSSG 314



 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 156/333 (46%), Gaps = 23/333 (6%)

Query: 205 VRGKCSRPRLQSLPSN--IRHIE-AGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPL 258
           +RG  + P+     S+  ++ +   G  C FLL+  G +   G   KG LG      QP 
Sbjct: 18  LRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLED-GEVYTCGLNTKGQLGHEREGNQPE 76

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMG 317
                 +  I+ ++   C E+H L ++ +G+++SWG G  G+LG   T  S   P+LI  
Sbjct: 77  QIGALADQHIIHVA---CGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV-- 374
            L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +  
Sbjct: 134 -LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPL 192

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  +  G 
Sbjct: 193 AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGE 251

Query: 435 SFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-S 488
             +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA   
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP 311

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
               +YA+G    GQ G  +  N V  PS V G
Sbjct: 312 SSGLIYAFGCGARGQLGTGHTCN-VKCPSPVKG 343



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 104/224 (46%), Gaps = 15/224 (6%)

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR-VTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           WG    G+ G G  L     +    G    R V +V+ G  H   + EDG +YT G    
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLGH 407
           G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG +  
Sbjct: 64  GQLGHE--REGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTT 121

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S  
Sbjct: 122 EDS--VAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTE------LSD--VGAVSCGESHTLVLSQDGHTVWSM 397
           WG    G+ G G     H   +V E      +SD  V  V+CG  H + L +DG  V++ 
Sbjct: 4   WGYWSLGQPGIG----THLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGE-VYTC 58

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G    G+LGHE  G    P+ I AL    +  V  G S S+AL+  G +F WG      L
Sbjct: 59  GLNTKGQLGHEREG--NQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQL 116

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           GL ++  S   P L+  L+   I+ VS G+ H LAL+   + + WG N+ GQ G      
Sbjct: 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFP 176

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               P +V  LE + + Q+ AG   S A ++
Sbjct: 177 SQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207



 Score = 47.4 bits (111), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 146/282 (51%), Gaps = 21/282 (7%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           +Y  GW     LG  N++   +P+ +    A+  L + +  C ++H L VT EGEV SWG
Sbjct: 87  LYSWGWGDFGRLGHGNSSDLLIPQPI---IALQGLRIKQIACGDSHCLAVTMEGEVQSWG 143

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G +     P+ I     G  +  V+AG  HS A+TE+G LY WG G +G L
Sbjct: 144 RNQNGQLGLGTSEDSLVPQKIQT-FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNL 202

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+  +   +  V+CG  HT+ +S  G  +++ G    G+LGH +   
Sbjct: 203 GLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLG-GLYTYGWSKYGQLGHGNFED 261

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P+ ++AL    + +V  G   S+ALT  GL++ WG      +G+   ++   +PV V
Sbjct: 262 SLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV-GDNVDRCSPVQV 320

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                 ++V +S G  H +A+++   V++WG  T GQ G  +
Sbjct: 321 KFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGD 362



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 9/191 (4%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG 380
           RV  +SAG SH+ A+    ++ +WG G+ G+LGHGD   R  PT ++ L    + +++CG
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACG 73

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             HTL  S+  + ++S G G+ G+LGH ++  +  P+ I AL+  R++++  G S  +A+
Sbjct: 74  ADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAV 133

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T +G V  WG      LGL +S  S   P  +       I  V+ G  H +A+++  E+Y
Sbjct: 134 TMEGEVQSWGRNQNGQLGLGTSEDSL-VPQKIQTFQGVPIKMVAAGAEHSVAITENGELY 192

Query: 495 AWGSNTMGQCG 505
            WG    G  G
Sbjct: 193 GWGWGRYGNLG 203



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 125/246 (50%), Gaps = 18/246 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
            +V +WG N + Q+          P+     Q +P  I+ + AG   +  +   G L  Y
Sbjct: 137 GEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVP--IKMVAAGAEHSVAITENGEL--Y 192

Query: 244 GKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G GW     LGL +   + +P++V        + +  C   H ++V+S G +Y++G  ++
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVS-SVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LGHGN      P+ +   L  K ++QVS G  HS A+T  GLLY WG    G++G GD
Sbjct: 252 GQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGD 310

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
              R +P  V    D  V  +SCG  HT+ +++    V+S G G  G+LGH DT    +P
Sbjct: 311 NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEK-ENVFSWGRGTNGQLGHGDTVDRNSP 369

Query: 417 KVIEAL 422
           K+IEAL
Sbjct: 370 KIIEAL 375



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 9/154 (5%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
           +  G   T  + S GGL  YG    G LG  N     +P+++    A+    +S+ S   
Sbjct: 227 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKL---QALSDKLISQVSGGW 283

Query: 280 -HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + +TS G +Y WG  + G++G G+ + +  P  +    + ++V Q+S G  H+ AVT
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF-PHDQKVVQISCGWRHTIAVT 342

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           E   +++WG G +G+LGHGD   R++P ++  LS
Sbjct: 343 EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 162/317 (51%), Gaps = 25/317 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKG-WLGLANTTIQPLPK-------RVPLEAAIVSLS 272
           IR I  G+  + +L   G +   G   +  L +  I+  P         + ++ + V + 
Sbjct: 54  IRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIH 113

Query: 273 V--SKCSEAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRR-PKLIMGGLYGKRVTQV 327
           V    C +AH + +T++G ++SWG   +G+LG    N +++ R P++    L    + Q+
Sbjct: 114 VISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINL--ANIVQI 171

Query: 328 SAGHSHSAAV-TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHT 384
           + G +HS A+ + DG+L+ WG  DHG+LG G  +S   PT V +L  +    ++ G SH+
Sbjct: 172 ACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHS 231

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           LVL+  G TV+  G    G++G  +   +  P +++ LR  +V ++  G  FSVA+T  G
Sbjct: 232 LVLTPSG-TVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATG 290

Query: 445 LVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            +F +G G        +  S   P  V  L    ++DV+ G  H LA+++ N++YA+G N
Sbjct: 291 GLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE-NKLYAFGLN 349

Query: 500 TMGQCGQDNFSNPVDQP 516
           T GQ G  N  +    P
Sbjct: 350 TSGQLGLLNVKHTTSIP 366



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 23/316 (7%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL     + +     +E+    L + +  C   H + +  +G V+S G  +  +LGH
Sbjct: 27  GQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH 86

Query: 304 GNTLSQRRPKL---------IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
                +R+P L         +     G  V  V+ G +H  A+T DG L++WG   +G+L
Sbjct: 87  DGI--KRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQL 144

Query: 355 GHGDL----KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           G   +    K+R+       L+++  ++CG +H+L L      + + G  + G+LG    
Sbjct: 145 GVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTR 204

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVL 465
                P  +  L    + ++ AG S S+ LT  G VF WG  +     ++       P L
Sbjct: 205 ESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSL 264

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           V  L + +++ ++ G+   +A++    ++ +G+ T GQ G  N  N    P +V+ L   
Sbjct: 265 VKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGN-QNSELFPKQVMELMGS 323

Query: 526 CVRQICAGSLFSIAYT 541
            V  +  G   ++A T
Sbjct: 324 VVLDVACGRCHTLAIT 339



 Score = 47.0 bits (110), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N+  QI    +     P L  L     +  +  G+  +  + +TGGL  +G   
Sbjct: 240 VFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGT 299

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            G LG  N   +  PK+V      V L V+ C   H L +T E ++Y++G+   G+LG
Sbjct: 300 YGQLGHGNQNSELFPKQVMELMGSVVLDVA-CGRCHTLAIT-ENKLYAFGLNTSGQLG 355


>gi|444918725|ref|ZP_21238787.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444709515|gb|ELW50526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 394

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 167/335 (49%), Gaps = 32/335 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N   Q+ DE     S P   +  S ++ + +G F +  L   G +  +G     
Sbjct: 80  VWAWGRNDAAQLGDETVVNRSAPTRVAGLSGVQSVASGYFQSLALGGDGSVWAWG----- 134

Query: 250 LANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
           L N++ IQ  P ++P  + I+++S       H L +   G V+ WG            L 
Sbjct: 135 LTNSSDIQMTPAKLPELSDIIAISAGTF---HSLALQQSGSVWFWG----------ELLD 181

Query: 309 QRRPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
           Q     +++ GL G  +T ++AG+SHS A+ + G+++ WG+   G+LG+G      TP  
Sbjct: 182 QSSDTPVLVEGLSG--ITTIAAGNSHSLALDKSGVVWAWGDNTLGQLGNGTQDESTTPVK 239

Query: 368 VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
           V  L  +  ++ G +H+L L  + + VW+ GS + G+LG+ + G + T   I+ L    V
Sbjct: 240 VQGLPTIKLIAAGGAHSLALDTE-NRVWTWGSNDEGQLGNGNKGGLRTLP-IQVLNLKDV 297

Query: 428 RKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH---TPVLVTGLSSHQIVDVSIGD 481
           +++ AG   S+ALT DG V  WG    G     +S     +PV  + L++  ++ +S G 
Sbjct: 298 KQLAAGIRHSLALTNDGNVMAWGSDSAGQLGDDLSLKEQLSPVETSSLTN--VIAISAGH 355

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           SH LAL     ++AWGSN+ GQ G    + P+  P
Sbjct: 356 SHSLALLSNGALFAWGSNSYGQLGGSTPTMPIPLP 390



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 136/267 (50%), Gaps = 30/267 (11%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + ++G V++WG  +  +LG    +++  P  + G L G  V  V++G+  S A+  
Sbjct: 70  HTLALRTDGSVWAWGRNDAAQLGDETVVNRSAPTRVAG-LSG--VQSVASGYFQSLALGG 126

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG  +   +       + TP  + ELSD+ A+S G  H+L L Q G +VW  G 
Sbjct: 127 DGSVWAWGLTNSSDI-------QMTPAKLPELSDIIAISAGTFHSLALQQSG-SVWFWG- 177

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSS 456
               +L  + +    TP ++E L    +  + AG S S+AL   G+V+ WG   LG   +
Sbjct: 178 ----ELLDQSS---DTPVLVEGLSG--ITTIAAGNSHSLALDKSGVVWAWGDNTLGQLGN 228

Query: 457 SISFH--TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
                  TPV V GL + +++  + G +H LAL   N V+ WGSN  GQ G  N      
Sbjct: 229 GTQDESTTPVKVQGLPTIKLI--AAGGAHSLALDTENRVWTWGSNDEGQLGNGNKGGLRT 286

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            P +V+ L+D  V+Q+ AG   S+A T
Sbjct: 287 LPIQVLNLKD--VKQLAAGIRHSLALT 311



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 114/219 (52%), Gaps = 24/219 (10%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V+QVS+   H+ A+  DG ++ WG  D  +LG   + +R  PT V  LS V +V+ G   
Sbjct: 61  VSQVSSRGQHTLALRTDGSVWAWGRNDAAQLGDETVVNRSAPTRVAGLSGVQSVASGYFQ 120

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L  DG +VW+ G  N   +         TP  +  L    +  + AGT  S+AL   
Sbjct: 121 SLALGGDG-SVWAWGLTNSSDI-------QMTPAKLPELSD--IIAISAGTFHSLALQQS 170

Query: 444 GLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           G V++WG  L  SS    TPVLV GLS   I  ++ G+SH LAL +   V+AWG NT+GQ
Sbjct: 171 GSVWFWGELLDQSS---DTPVLVEGLSG--ITTIAAGNSHSLALDKSGVVWAWGDNTLGQ 225

Query: 504 CG---QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            G   QD  + PV    KV GL    ++ I AG   S+A
Sbjct: 226 LGNGTQDESTTPV----KVQGLP--TIKLIAAGGAHSLA 258


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 31/286 (10%)

Query: 240 LLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSK-----CSEAHVLTVTSE 287
           + +Y  GW     LG  N++    P P        IV+L   K     C ++H LTVT  
Sbjct: 93  MQLYSWGWGDFGRLGHGNSSDVFNPQP--------IVALQGMKIKQIACGDSHCLTVTFN 144

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G+V+SWG  ++G+LG GN      P+ I     G  V  ++AG  H+ A+TE G LY WG
Sbjct: 145 GQVHSWGRNQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWG 203

Query: 348 EGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            G +G LG  D   R  P  V+  E   +  V+CG  H++ +S  G  +++ G    G+L
Sbjct: 204 WGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSG-ALYTYGWSKYGQL 262

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           GH D      P+ +EAL+   + ++  G   ++A+  DG ++ WG      +G+  + + 
Sbjct: 263 GHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN-VD 321

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             +PV V      +IV V+ G  H LAL++   +++WG    GQ G
Sbjct: 322 HCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLG 367



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 134/269 (49%), Gaps = 13/269 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVT 338
           H   + S   V SWG GE G+LGHG+  S+ RP   ++      RVT V  G  H+ A +
Sbjct: 32  HSAALLSGQMVCSWGRGEDGQLGHGD--SEDRPVPTVLTSFDVPRVTSVICGADHTIAYS 89

Query: 339 EDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
           +D + LY+WG GD GRLGHG+      P  +  L    +  ++CG+SH L ++ +G  V 
Sbjct: 90  DDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQ-VH 148

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR- 454
           S G    G+LG  +      P+ I+A     V+ + AG   + A+T  G ++ WG G   
Sbjct: 149 SWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYG 208

Query: 455 ----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
               S       P  V+ +   ++V V+ G  H +++S    +Y +G +  GQ G  +F 
Sbjct: 209 NLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           + +  P K+  L+DV + QI  G   ++A
Sbjct: 269 DHL-VPRKLEALKDVPISQISGGWRHTMA 296



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 110/202 (54%), Gaps = 12/202 (5%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSC 379
           + V  +SAG +HSAA+    ++ +WG G+ G+LGHGD + R  PT++T  ++  V +V C
Sbjct: 21  QSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVIC 80

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT+  S D   ++S G G+ G+LGH ++  V  P+ I AL+  +++++  G S  + 
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLT 140

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +T++G V  WG      LGL ++  S   P  +       +  ++ G  H  A+++  ++
Sbjct: 141 VTFNGQVHSWGRNQNGQLGLGNNQDSL-LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDL 199

Query: 494 YAWGSNTMGQCG---QDNFSNP 512
           Y WG    G  G   +D+ S P
Sbjct: 200 YGWGWGRYGNLGLSDRDDRSVP 221



 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 155/334 (46%), Gaps = 23/334 (6%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS----KVYTWGCN----LHHQILDEVR 206
           GD +     T + S   P++T  I   D ++A+S    ++Y+WG      L H    +V 
Sbjct: 56  GDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVF 115

Query: 207 GKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP 263
                  LQ +   I+ I  G      +   G +  +G+   G LGL N     LP+++ 
Sbjct: 116 NPQPIVALQGM--KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIK 173

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               +    ++  +E H   +T  G++Y WG G +G LG  +   +  P+ +   + G++
Sbjct: 174 AFEGVCVKMIAAGAE-HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSS-VEGEK 231

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGE 381
           +  V+ G  HS +V+  G LYT+G   +G+LGHGD +    P  +  L DV    +S G 
Sbjct: 232 MVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGW 291

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            HT+ +++DG  ++  G    G++G ED     +P  +    + ++ +V  G   ++ALT
Sbjct: 292 RHTMAVAEDG-KLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALT 350

Query: 442 WDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
            +  +F WG G          I  +TP ++  LS
Sbjct: 351 ENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 24/310 (7%)

Query: 246 GWLGLANTTIQPLPK-----RVPLEAAIVSLSVSKCSEAHVLTVTS-EGEVYSWGVGEHG 299
           G LG  ++  +P+P       VP   +++      C   H +  +  E ++YSWG G+ G
Sbjct: 51  GQLGHGDSEDRPVPTVLTSFDVPRVTSVI------CGADHTIAYSDDEMQLYSWGWGDFG 104

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGHGN+     P+ I+  L G ++ Q++ G SH   VT +G +++WG   +G+LG G+ 
Sbjct: 105 RLGHGNSSDVFNPQPIVA-LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNN 163

Query: 360 KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
           +    P  +     V    ++ G  HT  +++ G  ++  G G  G LG  D    + P+
Sbjct: 164 QDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGG-DLYGWGWGRYGNLGLSDRDDRSVPE 222

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSH 472
            + ++   ++  V  G   SV+++  G ++ +G      L       H  P  +  L   
Sbjct: 223 KVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDV 282

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-QDNFSNPVDQPSKVVGLEDVCVRQIC 531
            I  +S G  H +A+++  ++Y WG N  GQ G +DN  +    P +V   ++  + Q+ 
Sbjct: 283 PISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHC--SPVEVNFPDEQKIVQVA 340

Query: 532 AGSLFSIAYT 541
            G   ++A T
Sbjct: 341 CGWRHTLALT 350


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 25/291 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG   ++ S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF 553
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP  +S L  AF
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VP--SSGLIYAF 319



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 136/282 (48%), Gaps = 11/282 (3%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           +VYT G N   Q+  E  G            +I H+  G+  +  L   G L  +G G  
Sbjct: 54  EVYTCGVNTKGQLGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 249 G-LANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G L   TI+    +P+ +        L VS C   H L + ++G+ ++WG   HG+LG G
Sbjct: 114 GQLGLMTIEDSVAVPRLIQKLNQQTILQVS-CGNWHCLALAADGQFFTWGRNSHGQLGLG 172

Query: 305 NTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               SQ  P+ +   L G  + QV AG +HS A++  G ++ WG  + G+LG  D K R 
Sbjct: 173 KEFPSQASPQRVR-SLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           +P  V  L    V  +SCGE HT VL++ G  V++ G+G+ G+LGH+       P+ +  
Sbjct: 232 SPCHVKLLRTQKVVYISCGEEHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290

Query: 422 LRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRSSSISFHT 462
           L    V ++  G   ++A     GL++ +G G R    + HT
Sbjct: 291 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 99/201 (49%), Gaps = 14/201 (6%)

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD- 373
           + G +  + V +V+ G +HS  + EDG +YT G    G+LGH   +  + P  +  L+D 
Sbjct: 27  VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQ 84

Query: 374 -VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
            +  V+CGESH+L LS  G    W  GS G LG +  ED+  V  P++I+ L +  + +V
Sbjct: 85  HIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDS--VAVPRLIQKLNQQTILQV 142

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
             G    +AL  DG  F WG      LGL     S  +P  V  L    +  V  G +H 
Sbjct: 143 SCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHS 202

Query: 485 LALSQYNEVYAWGSNTMGQCG 505
            ALS    V+ WG N  GQ G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLG 223



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 22/284 (7%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS---KVYTWGCNLHHQI-LDEVRGKC 209
           LG  +  N    I + +   + +       S+A S   ++++WG     Q+ L  +    
Sbjct: 66  LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSV 125

Query: 210 SRPRL-QSL-PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANT-TIQPLPKRV- 262
           + PRL Q L    I  +  G +    L + G    +G+   G LGL      Q  P+RV 
Sbjct: 126 AVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVR 185

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP---KLIMGGL 319
            LE   + L+      AH   ++  G V+ WG+   G+LG  +   +  P   KL    L
Sbjct: 186 SLEG--IPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKL----L 239

Query: 320 YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAV 377
             ++V  +S G  H+A +T+ G ++T+G G  G+LGH  +     P  V EL  S+V  +
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQI 299

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           +CG  HTL        +++ G G  G+LG   T  V  P  ++ 
Sbjct: 300 ACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGVNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL +   S   P L+  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  126 bits (316), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/359 (33%), Positives = 174/359 (48%), Gaps = 24/359 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   Q+ D        P R+Q L S +  + AG   +  + S G +  +G    
Sbjct: 117 VWAWGSNSDGQLGDGTTTMRLTPVRVQGL-SGVVSVAAGSSYSLAVRSDGTVWAWGSNFS 175

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   T+ + +P +VP  + +VS++      +H L V S+G V++WG    G+LG G 
Sbjct: 176 GQLGDGTTSNRLVPVQVPGLSGVVSVA---AGSSHSLAVLSDGSVWAWGANSSGQLGDGT 232

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +++  P  + G L    V  V+AG +HS AV  DG ++TWG    G+LG G    R  P
Sbjct: 233 KINRLVPVQVPG-L--SGVVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVP 289

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V A   G  H+L L  DG +VW+ G  + G+LG + +   + P  +  L   
Sbjct: 290 VRVQGLSGVVASDVGSYHSLALRSDG-SVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSGG 348

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH--TPVLVTGLSSHQIVDVSIG 480
               V AG+S S+A+  DG V+ WG    G R    + +  +PV V GL     V V+ G
Sbjct: 349 --MAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAG 404

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +H LA      V+AWGSN  GQ G     N    P +V GL  V    + AG   S+A
Sbjct: 405 FNHSLAARSDGSVWAWGSNDSGQLGDGTTRNST-SPVQVQGLSGVVA--VAAGFDHSLA 460



 Score =  125 bits (314), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 166/353 (47%), Gaps = 26/353 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   +  +      + P ++Q L   +  + AG   +    S G +  +G    
Sbjct: 367 VWAWGSNFSGERGEGTTNNRASPVQVQGLGGGVA-VAAGFNHSLAARSDGSVWAWGSNDS 425

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   T     P +V   + +V+++       H L + S+G V++WG   +G+LG G 
Sbjct: 426 GQLGDGTTRNSTSPVQVQGLSGVVAVA---AGFDHSLALRSDGSVWAWGSNAYGQLGEGT 482

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T ++  P  ++ G     V  V+AG +HS AV  DG ++TWG   +G+LG G   +R  P
Sbjct: 483 TTNRLVPVQVLSG-----VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVP 537

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V AV+ G  H+L +  DG +VW+ GS + G+LG   T     P  +  L   
Sbjct: 538 VQVQGLSGVAAVAAGSFHSLAVHSDG-SVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG 596

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
               V AG   S+ +  DG V+ WG      LG   ++ S   PV V GLS   +V V  
Sbjct: 597 --VAVAAGGFHSLVVRSDGTVWTWGSNSFGELG-DGTTTSRSVPVQVQGLSG--VVAVDA 651

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           G+SH LA+     V+ WG N+ GQ G D  +     P +V GL  V      A
Sbjct: 652 GNSHSLAVRSDGTVWTWGYNSYGQLG-DGTTTRRSVPVQVPGLSGVVAMATGA 703



 Score =  124 bits (312), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 163/327 (49%), Gaps = 25/327 (7%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            V+ WG N   Q+ D      + P ++Q L S +  + AG   +  L S G +  +G   
Sbjct: 416 SVWAWGSNDSGQLGDGTTRNSTSPVQVQGL-SGVVAVAAGFDHSLALRSDGSVWAWGSNA 474

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   TT + +P  V + + +V+++       H L V S+G V++WG   +G+LG G
Sbjct: 475 YGQLGEGTTTNRLVP--VQVLSGVVAVA---AGSNHSLAVRSDGTVWTWGSNLYGQLGDG 529

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T ++  P  + G L G  V  V+AG  HS AV  DG ++ WG    G LG G   +R  
Sbjct: 530 TTSNRLVPVQVQG-LSG--VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV 586

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V  LS   AV+ G  H+LV+  DG TVW+ GS + G+LG   T   + P  ++ L  
Sbjct: 587 PGRVPGLSGGVAVAAGGFHSLVVRSDG-TVWTWGSNSFGELGDGTTTSRSVPVQVQGLSG 645

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V  V AG S S+A+  DG V+ WG      LG   ++     PV V GLS   +V ++
Sbjct: 646 --VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLG-DGTTTRRSVPVQVPGLSG--VVAMA 700

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G  H L +     V+AWG N+ GQ G
Sbjct: 701 TGALHPLVVRSDGTVWAWGYNSFGQLG 727



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 12/222 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG NL+ Q+ D        P ++Q L S +  + AG F +  + S G +  +G    
Sbjct: 515 VWTWGSNLYGQLGDGTTSNRLVPVQVQGL-SGVAAVAAGSFHSLAVHSDGSVWAWGSNSS 573

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   T+ + +P RVP  +  V+++       H L V S+G V++WG    G+LG G 
Sbjct: 574 GELGDGTTSNRLVPGRVPGLSGGVAVAAGGF---HSLVVRSDGTVWTWGSNSFGELGDGT 630

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T S+  P  + G L G  V  V AG+SHS AV  DG ++TWG   +G+LG G    R  P
Sbjct: 631 TTSRSVPVQVQG-LSG--VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP 687

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
             V  LS V A++ G  H LV+  DG TVW+ G  + G+LG+
Sbjct: 688 VQVPGLSGVVAMATGALHPLVVRSDG-TVWAWGYNSFGQLGN 728



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 140/291 (48%), Gaps = 28/291 (9%)

Query: 255 IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKL 314
           ++  P R  L A            ++ L +  +G V++ G  + G+LG G T +   P  
Sbjct: 42  LRDAPSRARLAAG----------SSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQ 91

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV 374
           + G L G  V  V+AG SHS AV  DG ++ WG    G+LG G    R TP  V  LS V
Sbjct: 92  VPG-LSG--VVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLSGV 148

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            +V+ G S++L +  DG TVW+ GS   G+LG   T     P  +  L    V  V AG+
Sbjct: 149 VSVAAGSSYSLAVRSDG-TVWAWGSNFSGQLGDGTTSNRLVPVQVPGLSG--VVSVAAGS 205

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
           S S+A+  DG V+ WG      LG   + I+   PV V GLS    V      +H LA+ 
Sbjct: 206 SHSLAVLSDGSVWAWGANSSGQLG-DGTKINRLVPVQVPGLSGVVAVAAGA--AHSLAVR 262

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               V+ WG+N+ GQ G    S+ +  P +V GL  V    +  GS  S+A
Sbjct: 263 SDGTVWTWGANSFGQLGDGTKSDRL-VPVRVQGLSGVVASDV--GSYHSLA 310



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 11/173 (6%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            V+ WG N   ++ D        P R+  L   +  + AG F + ++ S G +  +G   
Sbjct: 564 SVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGGVA-VAAGGFHSLVVRSDGTVWTWGSNS 622

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   TT + +P +V   + +V++       +H L V S+G V++WG   +G+LG G
Sbjct: 623 FGELGDGTTTSRSVPVQVQGLSGVVAV---DAGNSHSLAVRSDGTVWTWGYNSYGQLGDG 679

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            T  +  P  + G L G  V  ++ G  H   V  DG ++ WG    G+LG+G
Sbjct: 680 TTTRRSVPVQVPG-LSG--VVAMATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 8/122 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG N   ++ D      S P ++Q L S +  ++AG   +  + S G +  +G    
Sbjct: 615 VWTWGSNSFGELGDGTTTSRSVPVQVQGL-SGVVAVDAGNSHSLAVRSDGTVWTWGYNSY 673

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   TT + +P +VP  + +V+++       H L V S+G V++WG    G+LG+G+
Sbjct: 674 GQLGDGTTTRRSVPVQVPGLSGVVAMATGAL---HPLVVRSDGTVWAWGYNSFGQLGNGS 730

Query: 306 TL 307
            L
Sbjct: 731 PL 732


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  126 bits (316), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 50/413 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR-LQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           ++ WG N   ++    + KC+ P+ +Q L +  ++ I +G   + ++   G L + G   
Sbjct: 17  LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSAL 76

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS--EAHVLTVTSEGEVYSWGVGEHGKLG 302
            G LG  +   QP   +  L  A+  L V++ +  + H L +   G+VY+WG   H KLG
Sbjct: 77  HGKLGFEDAN-QPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKLG 135

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG----DHGRLGHGD 358
                  R   L       + + Q+  G  HSAA++ +G LYTWG G    + G+LGHG 
Sbjct: 136 SKAGKPARIETL------KQTIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHGH 189

Query: 359 LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK- 417
           L    TP +V +  ++   SCG  H + L +DG  +WS GSG  G+ G  +      PK 
Sbjct: 190 LNDVETPQIVKD--NIVKFSCGGYHMMALDKDGE-LWSWGSGMYGETGQGEFQDSLLPKK 246

Query: 418 ---------------VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
                           ++  ++  ++++  G   S+ L+  G+V+  G      LG++++
Sbjct: 247 VKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKAT 306

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             + +   LV G+S   IV ++ G +H + L+ +++VY  G N  GQ G  ++ +   Q 
Sbjct: 307 E-NQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT-QY 364

Query: 517 SKVVGLEDVCVRQICAGSLFS---IAYTVPPSNSALSSAFTPLCVDVRPHTFT 566
           +++  LE   ++Q+ AG   S   I Y  P  +    S  +PL  +V+   FT
Sbjct: 365 TRINFLEQRRIKQLFAGGNHSWALIDYNQPRIDDY--SPPSPLNEEVKIENFT 415



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 35/279 (12%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           + +VY WG  LH ++      K  +P R+++L   I  I  G F +  L + G L  +G 
Sbjct: 120 NGQVYAWGGTLHKKL----GSKAGKPARIETLKQTIVQIGCGDFHSAALSANGDLYTWGG 175

Query: 245 ------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
                 +G LG  +      P+ V  +  IV  S   C   H++ +  +GE++SWG G +
Sbjct: 176 GGRDYNRGQLGHGHLNDVETPQIV--KDNIVKFS---CGGYHMMALDKDGELWSWGSGMY 230

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKR---------------VTQVSAGHSHSAAVTEDGLL 343
           G+ G G       PK +      K                + ++S G  HS  ++  G++
Sbjct: 231 GETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIV 290

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           Y  G   HG+LG    ++++   LV  +S   +  ++ G +H++VL+     V++ G   
Sbjct: 291 YACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHS-DVYTCGHNQ 349

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            G+LG  D    T    I  L + R++++ AG + S AL
Sbjct: 350 AGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGNHSWAL 388



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 31/228 (13%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRL------QSLPSNIRHIEAGQFCTFLLDSTGG 239
           A+  +YTWG        D  RG+     L      Q +  NI     G +    LD  G 
Sbjct: 166 ANGDLYTWGGGGR----DYNRGQLGHGHLNDVETPQIVKDNIVKFSCGGYHMMALDKDGE 221

Query: 240 LLVYGKGWLG-LANTTIQP--LPKRVPLE-----AAIVSLSVSKCSEA----------HV 281
           L  +G G  G       Q   LPK+V +        I  + V    E+          H 
Sbjct: 222 LWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHS 281

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           L ++++G VY+ G  +HG+LG   T +Q + +L++G + GK + Q++AG +HS  +T   
Sbjct: 282 LLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIG-ISGKTIVQIAAGWNHSIVLTSHS 340

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVL 387
            +YT G    G+LG GD +SR   T +   E   +  +  G +H+  L
Sbjct: 341 DVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGNHSWAL 388


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  126 bits (316), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 155/353 (43%), Gaps = 40/353 (11%)

Query: 190  VYTWGCNLHHQILDEVRGKC-SRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG-- 244
            +YTWG N H Q+  +   K  S P     P+ +   H+ AG   +  L S G L  +G  
Sbjct: 729  LYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDN 788

Query: 245  -KGWLGLANTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             +G LG   T+  P   P +V   A I  +  S    +HV+ ++S+G +Y+WG    G+L
Sbjct: 789  SRGQLGRTVTSNNPANRPHKVEAPAGITFVQAS-AGGSHVVALSSDGNIYTWGDNSAGQL 847

Query: 302  GHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G   T++   P    G          T VSAG  H+ AV   G +YTWG+  HG LG   
Sbjct: 848  GR--TVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGR-- 903

Query: 359  LKSRHTPTLVTELSDVGA------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT-- 410
              +  TP      +D  A       S GESH++ +S DG ++++ G    G+LG +    
Sbjct: 904  -STTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDG-SIYTWGDTANGRLGRDTNIT 961

Query: 411  -----GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVL 465
                 GK  TP  +         +  AG   S+AL  DG ++ WG    S   S   P  
Sbjct: 962  PADKPGKADTPAGVT------FTQASAGGKHSIALGSDGSLYTWG---DSGKTSAGRPNK 1012

Query: 466  VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
            V   +       S G S+ LAL     +Y+WG N  GQ G+D        P+K
Sbjct: 1013 VDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRDTGDTWSASPAK 1065



 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 134/324 (41%), Gaps = 34/324 (10%)

Query: 262  VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
             P  A  + +S +   + H   V S+G +Y+WG   HG+LG                  G
Sbjct: 701  TPPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAG 760

Query: 322  KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR--HTPTLVTELSDVGAV-- 377
                 VSAG+  S A+  DG LY+WG+   G+LG     +   + P  V   + +  V  
Sbjct: 761  VTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQA 820

Query: 378  SCGESHTLVLSQDGHTVWSMGSGNLGKLGH--------EDTGKVTTPKVIEALRKFRVRK 429
            S G SH + LS DG+ +++ G  + G+LG         +  GK  TP  +          
Sbjct: 821  SAGGSHVVALSSDGN-IYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVT------FTS 873

Query: 430  VCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
            V AG   +VA+   G V+ WG      LG  ++S     P      +       S G+SH
Sbjct: 874  VSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADKPGKADTPAGITFTQASAGESH 933

Query: 484  VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA---- 539
             +A+S    +Y WG    G+ G+D    P D+P K      V   Q  AG   SIA    
Sbjct: 934  SVAVSDDGSIYTWGDTANGRLGRDTNITPADKPGKADTPAGVTFTQASAGGKHSIALGSD 993

Query: 540  ---YTVPPSNSALSSAFTPLCVDV 560
               YT    +S  +SA  P  VD 
Sbjct: 994  GSLYTW--GDSGKTSAGRPNKVDT 1015



 Score = 89.7 bits (221), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 157/383 (40%), Gaps = 58/383 (15%)

Query: 185 VAHSKVYTWGCNLHH--QILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLL--DSTGGL 240
            +   +Y WG N +      DE R     P L + P+ +   +     T  L   S G L
Sbjct: 184 ASDGNLYRWGDNNYKLGTPEDEKR----TPSLVNPPTGVHFTQVSTGYTHFLAIGSDGNL 239

Query: 241 LVYGKGWLG-LANTTIQPLPKRVP---------LEAAIVSLSVSKCSEAHVLTVTSEGEV 290
             +G    G L   T+   PK  P            A V  + +   + H L + S+G +
Sbjct: 240 YSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGSDGNL 299

Query: 291 YSWGVGEHGKLGH--GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           YSWG  ++G+LG   G+ +   +P  +       ++TQ+SAG  +S A+  DG LY+WG+
Sbjct: 300 YSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTFYSMALDSDGDLYSWGD 359

Query: 349 GDH---GRLGHGDLKSRHTPTLVTELSDVGA---VSCGESHTLVLSQDGHTVWSMGSGNL 402
             +   GR   G      +P  +T  + V     +  GE  +L  S DG +++S G    
Sbjct: 360 NTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWTSLATSSDG-SLYSWGWNEY 418

Query: 403 GKLGHEDTG--------KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL--- 451
           G+LG             KVT P  +      +  KV A    S+AL  DG ++ WGL   
Sbjct: 419 GQLGRNTAPARQDRTPRKVTMPAGVT-----KFTKVSAEHRHSLALGSDGNLYSWGLNDC 473

Query: 452 ---GLRSSSISFH-------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
              G  + S  +        TP  V      Q  +VS G SH LA+     +Y+WG N  
Sbjct: 474 KQLGRDTGSAKYDVKPGKVPTPAGVA-----QFTEVSAGYSHSLAIGSDGNLYSWGQNKY 528

Query: 502 GQCGQDNFSNPVDQPSKVVGLED 524
           G+ G+         P  V   ED
Sbjct: 529 GELGRPTSGKYDSSPGMVAFPED 551



 Score = 87.4 bits (215), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 43/327 (13%)

Query: 190 VYTWGCNLHHQILDEVRGKCSR--------PRLQSLPSNIRHIEA--GQFCTFLLDSTGG 239
           +Y+WG N   ++  E      +        P+L + P+ +   +A  G++ +  L S G 
Sbjct: 239 LYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWHSLALGSDGN 298

Query: 240 LLVYGKGWLG-LANTTIQPL----PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           L  +G+   G L   T   +    P +V L   I  ++       + + + S+G++YSWG
Sbjct: 299 LYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGITKITQISAGTFYSMALDSDGDLYSWG 358

Query: 295 VGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
              + +LG    G     R P+ +      K+ T + AG   S A + DG LY+WG  ++
Sbjct: 359 DNTYDELGRYAGGYPFRDRSPRKMTMPAGVKKFTWIKAGEWTSLATSSDGSLYSWGWNEY 418

Query: 352 GRLGHGDLKSRH--TPTLVTELSDV---GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G+LG     +R   TP  VT  + V     VS    H+L L  DG+ ++S G  +  +LG
Sbjct: 419 GQLGRNTAPARQDRTPRKVTMPAGVTKFTKVSAEHRHSLALGSDGN-LYSWGLNDCKQLG 477

Query: 407 HE--------DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            +          GKV TP  +      +  +V AG S S+A+  DG ++ WG      LG
Sbjct: 478 RDTGSAKYDVKPGKVPTPAGVA-----QFTEVSAGYSHSLAIGSDGNLYSWGQNKYGELG 532

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSI 479
             +S     +P +V      + VDVS 
Sbjct: 533 RPTSGKYDSSPGMVAFPEDPKPVDVSF 559



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 25/200 (12%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHT 384
           V A    S A+  DG LY WG+ ++ +LG  + + R TP+LV   + V    VS G +H 
Sbjct: 173 VPAKEEGSQAIASDGNLYRWGDNNY-KLGTPEDEKR-TPSLVNPPTGVHFTQVSTGYTHF 230

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHE-------DTGKVTT-PKVIEALRKFRVRKVCAGTSF 436
           L +  DG+ ++S G+   G+LG E       D  ++   PK++         + CAG   
Sbjct: 231 LAIGSDGN-LYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAGVHFTQACAGKWH 289

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPV----LVTGLSSHQIVDVSIGDSHVLA 486
           S+AL  DG ++ WG      LG  + S  +        L  G++  +I  +S G  + +A
Sbjct: 290 SLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKGIT--KITQISAGTFYSMA 347

Query: 487 LSQYNEVYAWGSNTMGQCGQ 506
           L    ++Y+WG NT  + G+
Sbjct: 348 LDSDGDLYSWGDNTYDELGR 367



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 113/281 (40%), Gaps = 40/281 (14%)

Query: 100  SRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKS 159
            SR  L +++   N A N   +V  PA    +  ++++     ++   +D NI   GD  +
Sbjct: 789  SRGQLGRTVTSNNPA-NRPHKVEAPA---GITFVQASAGGSHVVALSSDGNIYTWGDNSA 844

Query: 160  SN------SNTDIDSTSTPKLTYNIGDTDISVAHS---------KVYTWGCNLHHQI-LD 203
                    SN   D         ++  T +S              VYTWG N H ++   
Sbjct: 845  GQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRS 904

Query: 204  EVRGKCSRPRLQSLPSNIRHIEA--GQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPL 258
                   +P     P+ I   +A  G+  +  +   G +  +G    G LG  +T I P 
Sbjct: 905  TTSTPADKPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTANGRLGR-DTNITPA 963

Query: 259  PKRVPLEA---AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
             K  P +A   A V+ + +     H + + S+G +Y+WG  + GK   G       P  I
Sbjct: 964  DK--PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWG--DSGKTSAGRPNKVDTPAGI 1019

Query: 316  MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
                     TQ SAG S+  A+  DG LY+WG+   G+LG 
Sbjct: 1020 T-------FTQASAGASYCLALGSDGNLYSWGDNAKGQLGR 1053



 Score = 47.4 bits (111), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 12/135 (8%)

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFHTPVLVTGLSS 471
           TP     +R   +  V A    S A+  DG ++ WG     L +      TP LV   + 
Sbjct: 160 TPPTTPDIRFSHI--VPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDEKRTPSLVNPPTG 217

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS-----NPV--DQPSKVVGLED 524
                VS G +H LA+     +Y+WG+N  G+ G++  S     NP   +QP  V     
Sbjct: 218 VHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKLVTPPAG 277

Query: 525 VCVRQICAGSLFSIA 539
           V   Q CAG   S+A
Sbjct: 278 VHFTQACAGKWHSLA 292


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 117/229 (51%), Gaps = 25/229 (10%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           A    VT  G++++WG  E G+LG  +      P+L+   L   ++  VS G  H  AVT
Sbjct: 215 AFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKT-LLDVKIVSVSCGRQHIGAVT 273

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS----DVGAVSCGESHTLVLSQDGHTV 394
           EDG LYTWG G  G+LGH ++KS   P  V   S     V  VSCG + T+VL ++   +
Sbjct: 274 EDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRN-QIL 332

Query: 395 WSMGSGNLGKLG------HEDTG------KVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           ++ G G   +LG      H D G      K ++PKV+EAL   +++ V  G   ++ALT 
Sbjct: 333 YAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTE 392

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
           D  V+ WG      LGL S       P LVT +S  +I  +S G+ H L
Sbjct: 393 DNEVYVWGWGSSGCLGLNSKRFQL-VPQLVTSISGEEISCISAGEKHSL 440



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 50/360 (13%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
           VY+WG     Q+ + E     ++P L    L   +  +  G F +  L   G +  +G  
Sbjct: 55  VYSWGRGKEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQL 114

Query: 245 ------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKC--SEAHVLTVTS-------EGE 289
                 K  L   N  ++      P   +I+  SVS+    E  +   TS       E  
Sbjct: 115 HKIDDSKTGLEATNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEAS 174

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
                 G+H  +G     +Q  P  + G L  + V  +SAG + SAAVT+ G ++TWG  
Sbjct: 175 TSEQSKGKH--IGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFN 232

Query: 350 DHGRLGHGDLKSR---HTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           + G+LG   LK R    +P LV  L DV   +VSCG  H   +++DG  +++ G G  G+
Sbjct: 233 EKGQLG---LKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDG-DLYTWGLGVFGQ 288

Query: 405 LGHEDTGKVTTPKVIEA--LRKFRVRKVCAGTSFSVALTWDGLVFWWG------------ 450
           LGH +      PK + A  L   +V +V  G++F++ L  + +++ +G            
Sbjct: 289 LGHSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEE 348

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                +G R +   + +P +V  L   +I  V+ G  H LAL++ NEVY WG  + G  G
Sbjct: 349 TQHLDMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLG 408



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 147/320 (45%), Gaps = 34/320 (10%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-HG 304
           G LG+ N      PK +      V +S S   EAH + V+  G+VYSWG G+ G+LG   
Sbjct: 12  GQLGIENIKEHLEPKVLESLKGKVIVSCS-SGEAHNICVSRFGDVYSWGRGKEGQLGVPE 70

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE---GDHGRLGHGDLKS 361
             L   +P LI   L+ +RV +V+ G+ HS A+T+ G +Y WG+    D  + G   L++
Sbjct: 71  KMLFSTKPNLIKTLLH-ERVVKVACGNFHSLALTDQGRVYEWGQLHKIDDSKTG---LEA 126

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT---------GK 412
            +    +  +S     S  E+           ++   SGN        T         GK
Sbjct: 127 TNGLLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGK 186

Query: 413 V-----TTPKVIEAL-RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           +     TTP  ++ L     V  + AG +FS A+T  G +F WG      LGL+    + 
Sbjct: 187 IIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFN- 245

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
            +P LV  L   +IV VS G  H+ A+++  ++Y WG    GQ G  N  + +  P KV 
Sbjct: 246 SSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYL-HPKKVA 304

Query: 521 G--LEDVCVRQICAGSLFSI 538
              L  + V Q+  GS F++
Sbjct: 305 AFSLNGIQVSQVSCGSNFTM 324



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 32/242 (13%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V S G  ++G+LG  N      PK ++  L GK +   S+G +H+  V+  G +Y+WG G
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPK-VLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRG 61

Query: 350 DHGRLGHGDLKSRHT-PTLVTEL--SDVGAVSCGESHTLVLSQDGHTV-WSMGSGNLGKL 405
             G+LG  +     T P L+  L    V  V+CG  H+L L+  G    W    G L K+
Sbjct: 62  KEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEW----GQLHKI 117

Query: 406 GHEDTGKVTTPKVIE--ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS------ 457
               TG   T  ++E   + K + + +    S S  L  +  ++    G           
Sbjct: 118 DDSKTGLEATNGLLEMPGMSKPKYQSIIE-NSVSQYLNGEKEIYDSTSGNNDDDDEASTS 176

Query: 458 -----------ISFH--TPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
                      I ++  TP+ V G L++ +++D+S G +   A+++  +++ WG N  GQ
Sbjct: 177 EQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQ 236

Query: 504 CG 505
            G
Sbjct: 237 LG 238



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           +V S+G+   G+LG E+  +   PKV+E+L+   +    +G + ++ ++  G V+ WG  
Sbjct: 2   SVISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRG 61

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
               LG+    +    P L+  L   ++V V+ G+ H LAL+    VY WG
Sbjct: 62  KEGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWG 112



 Score = 43.9 bits (102), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H L +T + EVY WG G  G LG  +   Q  P+L+   + G+ ++ +SAG  HS 
Sbjct: 382 CGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVT-SISGEEISCISAGEKHSL 440

Query: 336 AV 337
            V
Sbjct: 441 IV 442


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 146/282 (51%), Gaps = 21/282 (7%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWG 294
           +Y  GW     LG  N++   +P+ +    A+  L + +  C ++H L VT EGEV SWG
Sbjct: 87  LYSWGWGDFGRLGHGNSSDLLIPQPI---IALQGLRIKQIACGDSHCLAVTMEGEVQSWG 143

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G +     P+ I     G  +  V+AG  HS A+TE+G LY WG G +G L
Sbjct: 144 RNQNGQLGLGTSEDSLVPQKIQT-FQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNL 202

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+  +   +  V+CG  HT+ +S  G  +++ G    G+LGH +   
Sbjct: 203 GLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLG-GLYTYGWSKYGQLGHGNFED 261

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P+ ++AL    + +V  G   S+ALT  GL++ WG      +G+   ++   +PV V
Sbjct: 262 SLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV-GDNVDRCSPVQV 320

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                 ++V +S G  H +A+++   V++WG  T GQ G  +
Sbjct: 321 KFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGD 362



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 9/191 (4%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG 380
           RV  +SAG SH+ A+    ++ +WG G+ G+LGHGD   R  PT ++ L    + +++CG
Sbjct: 14  RVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACG 73

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             HTL  S+  + ++S G G+ G+LGH ++  +  P+ I AL+  R++++  G S  +A+
Sbjct: 74  ADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAV 133

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T +G V  WG      LGL +S  S   P  +       I  V+ G  H +A+++  E+Y
Sbjct: 134 TMEGEVQSWGRNQNGQLGLGTSEDSL-VPQKIQTFQGVPIKMVAAGAEHSVAITENGELY 192

Query: 495 AWGSNTMGQCG 505
            WG    G  G
Sbjct: 193 GWGWGRYGNLG 203



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 125/246 (50%), Gaps = 18/246 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
            +V +WG N + Q+          P+     Q +P  I+ + AG   +  +   G L  Y
Sbjct: 137 GEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVP--IKMVAAGAEHSVAITENGEL--Y 192

Query: 244 GKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G GW     LGL +   + +P++V        + +  C   H ++V+S G +Y++G  ++
Sbjct: 193 GWGWGRYGNLGLGDRNDRWIPEKVS-SVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LGHGN      P+ +   L  K ++QVS G  HS A+T  GLLY WG    G++G GD
Sbjct: 252 GQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGD 310

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
              R +P  V    D  V  +SCG  HT+ +++    V+S G G  G+LGH DT    +P
Sbjct: 311 NVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEK-ENVFSWGRGTNGQLGHGDTVDRNSP 369

Query: 417 KVIEAL 422
           K+IEAL
Sbjct: 370 KIIEAL 375



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 9/154 (5%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
           +  G   T  + S GGL  YG    G LG  N     +P+++    A+    +S+ S   
Sbjct: 227 VACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKL---QALSDKLISQVSGGW 283

Query: 280 -HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + +TS G +Y WG  + G++G G+ + +  P  +    + ++V Q+S G  H+ AVT
Sbjct: 284 RHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKF-PHDQKVVQISCGWRHTIAVT 342

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           E   +++WG G +G+LGHGD   R++P ++  LS
Sbjct: 343 EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QI+ V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSN--TDIDSTSTPKLTYNI-GDTDISVA 186
           + +I+ AC  Y  L       +   G  K       TD    ++P+L  ++ G   + VA
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 187 ----HSKVYT-------WGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
               HS V T       WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           YS+G+G +G+LG G+T +++ P  + G  Y
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QI+ V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSN--TDIDSTSTPKLTYNI-GDTDISVA 186
           + +I+ AC  Y  L       +   G  K       TD    ++P+L  ++ G   + VA
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 187 ----HSKVYT-------WGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
               HS V T       WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           YS+G+G +G+LG G+T +++ P  + G  Y
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 152/331 (45%), Gaps = 52/331 (15%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKL 301
           G+GW  ++   +Q L          + LSV +  C   H   +T  GE+++WG G  G+L
Sbjct: 254 GEGWSDVSPVVVQGL----------LGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRL 303

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           GHGN      P+ I   L G    QV+ G +++AAVT  G LYTWG G++GRLG GD+  
Sbjct: 304 GHGNREGLESPRRIEA-LEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVAD 362

Query: 362 RHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           RHTP+ V  L S V  V  G  H+ VL+++G TV++ G       GH D   V  P++I 
Sbjct: 363 RHTPSRVEGLHSKVKEVYAGSVHSCVLTREG-TVYAFGKHEY--TGHGDHEDVLDPRLIP 419

Query: 421 ALRK-----FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS---------SISF 460
                     R   V  G   ++ALT  G V+ WG      LG+ +S         +   
Sbjct: 420 TFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFL 479

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
            +P LV  L    IV V  G  H  AL+   ++Y  G N  GQ G     +P   P    
Sbjct: 480 PSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLG---LGSPQGFPQNER 536

Query: 521 G------------LEDVCVRQICAGSLFSIA 539
           G            L+ + ++QI  G   S+A
Sbjct: 537 GHPFQADFCLIDRLQHLKIKQIACGGEHSVA 567



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 26/276 (9%)

Query: 290 VYSWGV---GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           V++ GV   G H ++G G         +++ GL G  V QV  G  H+A +T+ G ++TW
Sbjct: 236 VFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTW 295

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G G  GRLGHG+ +   +P  +  L  +    V+CG ++T  ++  G  +++ G+G  G+
Sbjct: 296 GRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGE-LYTWGAGENGR 354

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPV 464
           LG  D     TP  +E L   +V++V AG+  S  LT +G V+ +G     +    H  V
Sbjct: 355 LGLGDVADRHTPSRVEGLHS-KVKEVYAGSVHSCVLTREGTVYAFGK-HEYTGHGDHEDV 412

Query: 465 L-------VTGLSSHQIVDVSIGDS--HVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVD 514
           L        +G S   +  +S+G    H +AL+   +VYAWG N + Q G  N F+ P +
Sbjct: 413 LDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRN 472

Query: 515 --------QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                    P  V  L  + + ++ AG   S A TV
Sbjct: 473 MEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTV 508



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 144/297 (48%), Gaps = 33/297 (11%)

Query: 181 TDISVAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           T    A  ++YTWG   + ++ L +V  + +  R++ L S ++ + AG   + +L   G 
Sbjct: 335 TAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGT 394

Query: 240 LLVYGK-GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA----HVLTVTSEGEVYSWG 294
           +  +GK  + G  +      P+ +P  +      V + S      H + +T +G+VY+WG
Sbjct: 395 VYAFGKHEYTGHGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWG 454

Query: 295 VGEHGKLGHGNTLSQRR----------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
                +LG GN+ +  R          P+L+   L G  + +V AG  HSAA+T DG LY
Sbjct: 455 HNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVES-LVGMNIVKVVAGWGHSAALTVDGQLY 513

Query: 345 TWGEGDHGRLGHGDLKS-----RHTP-----TLVTELS--DVGAVSCGESHTLVLSQDGH 392
             G    G+LG G  +      R  P      L+  L    +  ++CG  H++ ++++G 
Sbjct: 514 VCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGE 573

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR--VRKVCAGTSFSVALTWDGLVF 447
            VWS G+G  G+LGHE T +   P++++AL+  R  +  V  G + ++ L   G+ F
Sbjct: 574 -VWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCTLVLA-GGVAF 628


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H   V+  GE+Y WG G H  G  G     SQ  P  + G L G  + +++ GH H+A +
Sbjct: 266 HTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAII 325

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV- 394
           +  G L+ +G+G  G LGHGD  +   P  V  L  V   A++CG  HT  + +   TV 
Sbjct: 326 SSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 385

Query: 395 --------WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
                   ++ G  + GKLGH D      P  +E L  F   +V    + ++ LT  G+V
Sbjct: 386 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVV 445

Query: 447 FWWGL---GLRSSSISFHTPV-LVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           F  G    G   + +S  T + L+ G L +  + ++S G SH+  L+   +V+ WG  T 
Sbjct: 446 FTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 505

Query: 502 GQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVD 559
           GQ G  ++   VD+  P+ V  LED  V  I  G  F++A  +   +  LSS    +C +
Sbjct: 506 GQLGLGDY---VDRSYPTLVEALEDKQVHSIACGFNFTMAICL---HRPLSSKDQSVCSN 559

Query: 560 VRPHTFTLIREFLEQYSACFETGDYIPFCSKVTH 593
            +     L   F  +   C+  G    FC+  ++
Sbjct: 560 CQ-----LTFGFTRKKHNCYNCGSM--FCNSCSN 586



 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 133/292 (45%), Gaps = 33/292 (11%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           I+ +    C E H   VT +GEV+SWGV   G+LGH  ++S   PK+I   L   RV  +
Sbjct: 202 IIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIE-SLASTRVKAI 260

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTP-TLVTELSDVG--AVSCGES 382
           + G  H+ AV+  G LY WGEG H  G  G    +S+  P  L   L  +    ++CG  
Sbjct: 261 AFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHW 320

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           HT ++S  G  +++ G G  G LGH DT  V  PK +E+L+  R + +  G   + A+  
Sbjct: 321 HTAIISSAGQ-LFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVE 379

Query: 443 ----------DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
                      G +F WG      LG     +    P  V  L+      VS   +  + 
Sbjct: 380 RMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKL-VPTCVEPLNDFDFAQVSCAKAQTIV 438

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC----VRQICAGS 534
           L+    V+  GS   G+ G     NP+ + + +  +E       VR+I +GS
Sbjct: 439 LTITGVVFTIGSKEHGRLG-----NPLSEDTSICLIEGPLKTEFVREISSGS 485



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 14/209 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHT--PTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++ WGE     L HGD+   +   P L+  T + DV +V+CGE H  ++++ G  V+S G
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGE-VFSWG 228

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
             N G+LGH+ +  V+ PK+IE+L   RV+ +  G   + A++  G ++ WG G     +
Sbjct: 229 VDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 288

Query: 459 --------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                    +    L   L    I+ ++ G  H   +S   +++A+G  T G  G  + +
Sbjct: 289 WGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD-T 347

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             V +P +V  L+ V  + I  G   + A
Sbjct: 348 LTVARPKQVESLKGVRAKAIACGPWHTAA 376



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 11/158 (6%)

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           +G L  +G   +G LG A+  ++ +P  V PL       +   C++A  + +T  G V++
Sbjct: 390 SGKLFTWGDADRGKLGHADKKMKLVPTCVEPLND--FDFAQVSCAKAQTIVLTITGVVFT 447

Query: 293 WGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            G  EHG+LG  N LS+     LI G L  + V ++S+G SH A +T +G ++TWG+G  
Sbjct: 448 IGSKEHGRLG--NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 505

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G+LG GD   R  PTLV  L D  V +++CG + T+ +
Sbjct: 506 GQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 543


>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
 gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 323

 Score =  125 bits (315), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 93/269 (34%), Positives = 140/269 (52%), Gaps = 31/269 (11%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           S    +H L + S+G V++WG   +G+LG G T  QR   +++ GL G  VT+++AG SH
Sbjct: 35  SAAGGSHSLILRSDGTVWAWGNNGNGQLGDG-TFEQRNEPVLVKGLTG--VTKIAAGSSH 91

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVTELSDVGAVSCGESHTLVLSQDG 391
           S A+  DG ++ WG    G+LG+    S +   P     L+DV  ++ G++H L L +DG
Sbjct: 92  SLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVGLTDVIDIAAGDAHGLALKKDG 151

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            TVW  GS +              P  +E+L    VR + A  + ++ +  DG V+ WG 
Sbjct: 152 -TVWIWGSNS-----------TNLPTRVESLTD--VRAIAAAGAHNLTVKKDGTVWSWGW 197

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LG+ ++  S   P  V+ LS+  IV V+ G  H LAL    +VYAWG NT GQ G
Sbjct: 198 NGYGQLGINNTG-SKDVPTKVSNLSN--IVSVAAGFHHSLALDVEGKVYAWGGNTYGQVG 254

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            D  +   + P +V  L D+   +I +GS
Sbjct: 255 -DGTTTQRNAPVEVPSLVDIV--EIASGS 280



 Score =  107 bits (268), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 12/219 (5%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V   +AG SHS  +  DG ++ WG   +G+LG G  + R+ P LV  L+ V  ++ G SH
Sbjct: 32  VISSAAGGSHSLILRSDGTVWAWGNNGNGQLGDGTFEQRNEPVLVKGLTGVTKIAAGSSH 91

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L  DG TVW  G    G+LG+  T      K ++A+    V  + AG +  +AL  D
Sbjct: 92  SLALKSDG-TVWGWGWNGKGQLGNNTTTSSNISKPVQAVGLTDVIDIAAGDAHGLALKKD 150

Query: 444 GLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           G V+ WG      S S + P  V  L+   +  ++   +H L + +   V++WG N  GQ
Sbjct: 151 GTVWIWG------SNSTNLPTRVESLTD--VRAIAAAGAHNLTVKKDGTVWSWGWNGYGQ 202

Query: 504 CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            G +N +   D P+KV  L ++    + AG   S+A  V
Sbjct: 203 LGINN-TGSKDVPTKVSNLSNIV--SVAAGFHHSLALDV 238



 Score = 90.5 bits (223), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 25/269 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N + Q+ D    + + P L    + +  I AG   +  L S G   V+G GW G
Sbjct: 51  VWAWGNNGNGQLGDGTFEQRNEPVLVKGLTGVTKIAAGSSHSLALKSDG--TVWGWGWNG 108

Query: 250 ---LANTTIQPLPKRVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
              L N T        P++A  ++  +     +AH L +  +G V+ WG        +  
Sbjct: 109 KGQLGNNTTTSSNISKPVQAVGLTDVIDIAAGDAHGLALKKDGTVWIWG-------SNST 161

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L  R   L         V  ++A  +H+  V +DG +++WG   +G+LG  +  S+  P
Sbjct: 162 NLPTRVESL-------TDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLGINNTGSKDVP 214

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
           T V+ LS++ +V+ G  H+L L  +G  V++ G    G++G   T +   P  + +L   
Sbjct: 215 TKVSNLSNIVSVAAGFHHSLALDVEG-KVYAWGGNTYGQVGDGTTTQRNAPVEVPSL--V 271

Query: 426 RVRKVCAG--TSFSVALTWDGLVFWWGLG 452
            + ++ +G  +  ++AL  DG V+ WGLG
Sbjct: 272 DIVEIASGSYSYHTLALKKDGTVYAWGLG 300



 Score = 90.5 bits (223), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 19/231 (8%)

Query: 190 VYTWGCNLHHQILDEV--RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG N   Q+ +        S+P      +++  I AG      L   G + ++G   
Sbjct: 101 VWGWGWNGKGQLGNNTTTSSNISKPVQAVGLTDVIDIAAGDAHGLALKKDGTVWIWG--- 157

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
              +N+T   LP RV    ++  +     + AH LTV  +G V+SWG   +G+LG  NT 
Sbjct: 158 ---SNST--NLPTRV---ESLTDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLGINNTG 209

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
           S+  P  +        +  V+AG  HS A+  +G +Y WG   +G++G G    R+ P  
Sbjct: 210 SKDVPTKVSNL---SNIVSVAAGFHHSLALDVEGKVYAWGGNTYGQVGDGTTTQRNAPVE 266

Query: 368 VTELSDVGAVSCGES--HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           V  L D+  ++ G    HTL L +DG TV++ G G  G+LG+  T     P
Sbjct: 267 VPSLVDIVEIASGSYSYHTLALKKDG-TVYAWGLGTSGQLGNGTTTNSNIP 316



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 12/161 (7%)

Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIV 269
           R++SL +++R I A       +   G +  +G    G LG+ NT  + +P +V   + IV
Sbjct: 166 RVESL-TDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLGINNTGSKDVPTKVSNLSNIV 224

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
           S++       H L +  EG+VY+WG   +G++G G T +QR   + +  L    + ++++
Sbjct: 225 SVAAGF---HHSLALDVEGKVYAWGGNTYGQVGDGTT-TQRNAPVEVPSLVD--IVEIAS 278

Query: 330 GHS--HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           G    H+ A+ +DG +Y WG G  G+LG+G   + + P  V
Sbjct: 279 GSYSYHTLALKKDGTVYAWGLGTSGQLGNGTTTNSNIPIQV 319



 Score = 61.2 bits (147), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 5/158 (3%)

Query: 159 SSNSNTDIDSTSTPKLTYNIGDTDISVAHS-KVYTWGCNLHHQILDEVRGKCSRPRLQSL 217
           S+N  T ++S +  +     G  +++V     V++WG N + Q+     G    P   S 
Sbjct: 160 STNLPTRVESLTDVRAIAAAGAHNLTVKKDGTVWSWGWNGYGQLGINNTGSKDVPTKVSN 219

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS 274
            SNI  + AG   +  LD  G +  +G    G +G   TT +  P  VP    IV ++ S
Sbjct: 220 LSNIVSVAAGFHHSLALDVEGKVYAWGGNTYGQVGDGTTTQRNAPVEVPSLVDIVEIA-S 278

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP 312
                H L +  +G VY+WG+G  G+LG+G T +   P
Sbjct: 279 GSYSYHTLALKKDGTVYAWGLGTSGQLGNGTTTNSNIP 316


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 155/334 (46%), Gaps = 33/334 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H   V+  GE+Y WG G H  G  G     SQ  P  + G L G  + +++ GH H+A +
Sbjct: 268 HTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAII 327

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV- 394
           +  G L+ +G+G  G LGHGD  +   P  V  L  V   A++CG  HT  + +   TV 
Sbjct: 328 SSAGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 387

Query: 395 --------WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
                   ++ G  + GKLGH D      P  +E L  F   +V    + ++ LT  G+V
Sbjct: 388 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVV 447

Query: 447 FWWGL---GLRSSSISFHTPV-LVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           F  G    G   + +S  T + L+ G L +  + ++S G SH+  L+   +V+ WG  T 
Sbjct: 448 FTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 507

Query: 502 GQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVD 559
           GQ G  ++   VD+  P+ V  LED  V  I  G  F++A  +   +  LSS    +C +
Sbjct: 508 GQLGLGDY---VDRSYPTLVEALEDKQVHSIACGFNFTMAICL---HRPLSSKDQSVCSN 561

Query: 560 VRPHTFTLIREFLEQYSACFETGDYIPFCSKVTH 593
            +     L   F  +   C+  G    FC+  ++
Sbjct: 562 CQ-----LTFGFTRKKHNCYNCGSM--FCNSCSN 588



 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 133/292 (45%), Gaps = 33/292 (11%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           I+ +    C E H   VT +GEV+SWGV   G+LGH  ++S   PK+I   L   RV  +
Sbjct: 204 IIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIE-SLASTRVKAI 262

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTP-TLVTELSDVG--AVSCGES 382
           + G  H+ AV+  G LY WGEG H  G  G    +S+  P  L   L  +    ++CG  
Sbjct: 263 AFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHW 322

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           HT ++S  G  +++ G G  G LGH DT  V  PK +E+L+  R + +  G   + A+  
Sbjct: 323 HTAIISSAGQ-LFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVE 381

Query: 443 ----------DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
                      G +F WG      LG     +    P  V  L+      VS   +  + 
Sbjct: 382 RMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKL-VPTCVEPLNDFDFAQVSCAKAQTIV 440

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC----VRQICAGS 534
           L+    V+  GS   G+ G     NP+ + + +  +E       VR+I +GS
Sbjct: 441 LTITGVVFTIGSKEHGRLG-----NPLSEDTSICLIEGPLKTEFVREISSGS 487



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 14/209 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHT--PTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++ WGE     L HGD+   +   P L+  T + DV +V+CGE H  ++++ G  V+S G
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGE-VFSWG 230

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
             N G+LGH+ +  V+ PK+IE+L   RV+ +  G   + A++  G ++ WG G     +
Sbjct: 231 VDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 290

Query: 459 --------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                    +    L   L    I+ ++ G  H   +S   +++A+G  T G  G  + +
Sbjct: 291 WGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD-T 349

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             V +P +V  L+ V  + I  G   + A
Sbjct: 350 LTVARPKQVESLKGVRAKAIACGPWHTAA 378



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 11/158 (6%)

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           +G L  +G   +G LG A+  ++ +P  V PL       +   C++A  + +T  G V++
Sbjct: 392 SGKLFTWGDADRGKLGHADKKMKLVPTCVEPLND--FDFAQVSCAKAQTIVLTITGVVFT 449

Query: 293 WGVGEHGKLGHGNTLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            G  EHG+LG  N LS+     LI G L  + V ++S+G SH A +T +G ++TWG+G  
Sbjct: 450 IGSKEHGRLG--NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 507

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G+LG GD   R  PTLV  L D  V +++CG + T+ +
Sbjct: 508 GQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAI 545


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 186/401 (46%), Gaps = 47/401 (11%)

Query: 132 LIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN-IG----DTD---- 182
           ++R A   +L   +L    I  L DR SS    +++  +  + T+  +G    DT+    
Sbjct: 1   MLRRAAPSHLAFGSLQRRRIGYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPV 60

Query: 183 -ISVAHSKVYTWGCNLHHQILDEVRGKC-SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
            IS      +T         +  ++G+  ++PRL ++      +  G F + L      +
Sbjct: 61  LISTLKLAAFT--------GMAPIQGRMPAKPRLGNV-----GVTCGLFHSVLFAEQD-V 106

Query: 241 LVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            V+GKG    LG+     Q  P   P    I  + ++     H + +T  G VY+WG G 
Sbjct: 107 FVWGKGDGGRLGIDTEFNQYKPYVNPR---IKRVQMASAGGLHNIALTEVGNVYTWGYGA 163

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLG 355
            G LGHG+   +  P+L+  G +  R+  VSAG SHSAAVTE G LYTWG  EG+ GRLG
Sbjct: 164 FGALGHGSYERELLPRLLE-GPWKDRIVHVSAGGSHSAAVTESGELYTWGRDEGE-GRLG 221

Query: 356 HG-----DLKSRHTPTLVTELS-DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           HG     D  +   PT V  L   + +V CG   T+ L++ G  +WS G     +LGH  
Sbjct: 222 HGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQ-LWSWGGNANHELGHGT 280

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSI-SFHTPV 464
                 PKV+ AL    + +V  G   + ALT DG V  WG G    L   ++ +   P 
Sbjct: 281 RANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPA 340

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +V  ++      ++ G +   A+++  ++Y WG N   Q G
Sbjct: 341 IVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLG 381



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 30/283 (10%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLI----------MGGLYGKRVTQ-------VS 328
           +E EV++WG G HG++GHG+  +++ P LI          M  + G+   +       V+
Sbjct: 33  AELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVT 92

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLS 388
            G  HS    E   ++ WG+GD GRLG     +++ P +   +  V   S G  H + L+
Sbjct: 93  CGLFHSVLFAEQD-VFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALT 151

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           + G+ V++ G G  G LGH    +   P+++E   K R+  V AG S S A+T  G ++ 
Sbjct: 152 EVGN-VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYT 210

Query: 449 WGLGLRSSSISFHTP-VLVTGLSSH----QIVDVSI-----GDSHVLALSQYNEVYAWGS 498
           WG       +    P ++  G  S     Q +DV I     G    +AL++  ++++WG 
Sbjct: 211 WGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWSWGG 270

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N   + G    +N   +P  V  LEDV + Q+  G   + A T
Sbjct: 271 NANHELGHGTRANNW-KPKVVAALEDVTLVQVACGGFHAAALT 312



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 29/223 (13%)

Query: 188 SKVYTWGCN-----LHH---QILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTG 238
            ++YTWG +     L H    I+DE  G  SRP ++Q+L   I  +  G F T  L  +G
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDE--GALSRPTKVQALDVPIASVYCGGFFTMALTKSG 263

Query: 239 GLLVYGKGW---LGLANTTIQPLPKRVPLEAAI--VSLSVSKCSEAHVLTVTSEGEVYSW 293
            L  +G      LG         PK V   AA+  V+L    C   H   +T +G+V +W
Sbjct: 264 QLWSWGGNANHELGHGTRANNWKPKVV---AALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G +G+LGHG   + + P ++   +  K  T ++ G + +AA+TE+G LYTWG+    +
Sbjct: 321 GYGGNGQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQ 379

Query: 354 LGHGDLKSRHTPTLVTELS---------DVGAVSCGESHTLVL 387
           LG   LK      ++ +           +V  VSCG +H + +
Sbjct: 380 LGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCI 422


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P++    A      V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRKSDFFANKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  VS G +H+ A+ + G +Y+WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEY 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCKKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEEYIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +  ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IDSEDCFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P +   +  F   C D     +T+    ++++
Sbjct: 378 YSNPQSCGPADDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+          K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFAN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTV-WSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEEYIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG   +G+LG G       L+ R +     +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 21/248 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDSTGG 239
            +VY+WG +   Q+     G         +P NI+         +  G + +  L     
Sbjct: 103 GQVYSWGLDSDGQL-----GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 240 LLVYGK---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +  +G+   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG 
Sbjct: 158 VFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGR 216

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            + G+LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LG
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 356 HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           H        P  V EL  S V  V+CG  HT         ++S G G  G+LG   T   
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 414 TTPKVIEA 421
            +P  ++ 
Sbjct: 336 KSPFTVKG 343


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY---GKRVTQVSA 329
           +T +++ P  + G  Y   G+R+  + +
Sbjct: 331 STSNRKSPFTVKGNWYPYNGQRLPDIDS 358


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 140/281 (49%), Gaps = 21/281 (7%)

Query: 242 VYGKGWL-------GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           VY  GW        G  N    P P R      IV ++   C + H L VT  GE++S+G
Sbjct: 88  VYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA---CGDTHTLAVTDTGELFSFG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ +   L G+ VT ++ G  HS A T  G ++ WG G +G L
Sbjct: 145 RNQNGQLGLGTTSDAILPQPVES-LRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G G  + RH P+ V  L  V   +V+CG  H++   + G  V++ G    G+LGH D   
Sbjct: 204 GVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETG-AVYTFGWSKYGQLGHGDCID 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              PK +E+L+  R+  +  G   + A    G ++ WG      LG+ S++ S + PV V
Sbjct: 263 QLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDS-NAPVPV 321

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
            GL++  +  +S G  H  A+++  +V++WG    GQ G +
Sbjct: 322 QGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHN 362



 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 140/283 (49%), Gaps = 19/283 (6%)

Query: 264 LEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
             +A+  L V+   C  +H L + S G   SWG GE G+LGHG+   +++P+ I   L  
Sbjct: 7   FRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIF-HLMQ 65

Query: 322 KRVTQVSAGHSHSAAVTE-DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVS 378
              + V +G  +S A+++    +Y+WG GD GRLGHGD      P  +  L+  ++  V+
Sbjct: 66  ASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA 125

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG++HTL ++  G  ++S G    G+LG   T     P+ +E+LR   V  +  G   S+
Sbjct: 126 CGDTHTLAVTDTGE-LFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSL 184

Query: 439 ALTWDGLVFWWGLGLRSSSISF------HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           A T  G VF WG G R  ++        H P  V GL   ++  V+ G  H +A  +   
Sbjct: 185 AATSAGDVFAWGWG-RYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGA 243

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAG 533
           VY +G +  GQ G  +    +DQ  P  V  L+D  +  I  G
Sbjct: 244 VYTFGWSKYGQLGHGDC---IDQLVPKAVESLKDSRIVLIAGG 283



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 120/227 (52%), Gaps = 14/227 (6%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG 380
           RVT VS G SHS A+  +G+  +WG G+ G+LGHGD + R  P  +  L  +   AV  G
Sbjct: 15  RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSG 74

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             +++ LSQ  + V+S G G+ G+LGH D   V  P+ I AL    + KV  G + ++A+
Sbjct: 75  AEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAV 134

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T  G +F +G      LGL ++S +   P  V  L   ++  ++ G  H LA +   +V+
Sbjct: 135 TDTGELFSFGRNQNGQLGLGTTSDAI-LPQPVESLRGQEVTSIACGGEHSLAATSAGDVF 193

Query: 495 AWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIA 539
           AWG    G+ G      P D+  PS+V GLE V V  +  G   SIA
Sbjct: 194 AWG---WGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA 237



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 133/284 (46%), Gaps = 22/284 (7%)

Query: 183 ISVAHSKVYTWGCN----LHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           +S   ++VY+WG      L H   ++V     +P       NI  +  G   T  +  TG
Sbjct: 81  LSQPRNEVYSWGWGDFGRLGHGDCNDVF--IPQPIRALAGRNIVKVACGDTHTLAVTDTG 138

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEA----AIVSLSVSKCSEAHVLTVTSEGEVY 291
            L  +G+   G LGL  T+   LP+  P+E+     + S++   C   H L  TS G+V+
Sbjct: 139 ELFSFGRNQNGQLGLGTTSDAILPQ--PVESLRGQEVTSIA---CGGEHSLAATSAGDVF 193

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           +WG G +G LG G    +  P  + G L G +VT V+ G  HS A  E G +YT+G   +
Sbjct: 194 AWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRHSIAADETGAVYTFGWSKY 252

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           G+LGHGD   +  P  V  L D  +  ++ G  HT   + D   ++S G    G+LG   
Sbjct: 253 GQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSA-ADDSGKLYSWGWNKFGQLGIGS 311

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
                 P  ++ L    V+ +  G   + A+T  G VF WG G+
Sbjct: 312 NTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGV 355



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 29/199 (14%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA--------GQFCTFLLDSTGGLL 241
           V+ WG   +  +          P  + LPS +  +E         G   +   D TG + 
Sbjct: 192 VFAWGWGRYGNL------GVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVY 245

Query: 242 VYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKC-----SEAHVLTVTSEGEVYSW 293
            +G    G LG  +   Q +PK      A+ SL  S+         H       G++YSW
Sbjct: 246 TFGWSKYGQLGHGDCIDQLVPK------AVESLKDSRIVLIAGGWRHTSAADDSGKLYSW 299

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G  + G+LG G+      P  + G L    V  +S G  H+ AVTE G +++WG G +G+
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQG-LNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQ 358

Query: 354 LGHGDLKSRHTPTLVTELS 372
           LGH + K  + P  + ELS
Sbjct: 359 LGHNEPKDTNAPVRLAELS 377


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 138/280 (49%), Gaps = 19/280 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   ++   E+Y+WG G H  G LGHG+  S   PK++ G L G +V  ++ G  H
Sbjct: 256 CGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGLQVVSIACGTWH 315

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL---- 387
           SA  T +G L+T+G+G  G LGHGD +S   P  V  L+ +    V+CG  HT  +    
Sbjct: 316 SALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVACGVWHTAAIIEVA 375

Query: 388 --SQDGHTVWSM---GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
             S    + W +   G G++ +LGH +      P  +  L ++   +V  G + ++ALT 
Sbjct: 376 FQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNFHQVECGHNMTIALTT 435

Query: 443 DGLVFWWG---LGLRSSSISF-HTPVLVTGLSSHQIVD-VSIGDSHVLALSQYNEVYAWG 497
            G VF  G    G   + +S    P LV      + V+ +S G  HV  L+  +E+Y WG
Sbjct: 436 SGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEFVEKISCGAHHVAILTNKSEIYTWG 495

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
               G+ G  +  +    P+ VV L+D  ++ +  GS F+
Sbjct: 496 MGANGRLGHGDVED-RKSPTLVVALKDRNIKNVSCGSNFT 534



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 11/156 (7%)

Query: 236 STGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTV--TSEGEV 290
           S+  L  +G G    LG  N      P RV   A ++  +  +    H +T+  T+ G V
Sbjct: 383 SSWKLFTWGDGDMHRLGHGNKETYLQPTRV---APLMEYNFHQVECGHNMTIALTTSGHV 439

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           ++ G  EHG+LG+  +L  + P L+   L G+ V ++S G  H A +T    +YTWG G 
Sbjct: 440 FTMGGTEHGQLGNPMSLG-KIPTLVQDKLLGEFVEKISCGAHHVAILTNKSEIYTWGMGA 498

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHT 384
           +GRLGHGD++ R +PTLV  L D  +  VSCG + T
Sbjct: 499 NGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSNFT 534


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P++    A      V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRKSDFFANKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  VS G +H+ A+ + G +Y+WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEY 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCKKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEEYIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +  ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IDSEDCFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P +   +  F   C D     +T+    ++++
Sbjct: 378 YSNPQSCGPADDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+          K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFAN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTV-WSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEEYIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG   +G+LG G       L+ R +     +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 21/248 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDSTGG 239
            +VY+WG +   Q+     G         +P NI+         +  G + +  L     
Sbjct: 103 GQVYSWGLDSDGQL-----GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 240 LLVYGK---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +  +G+   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG 
Sbjct: 158 VFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGR 216

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            + G+LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LG
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 356 HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           H        P  V EL  S V  V+CG  HT         ++S G G  G+LG   T   
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 414 TTPKVIEA 421
            +P  ++ 
Sbjct: 336 KSPFTVKG 343


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 169/370 (45%), Gaps = 28/370 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVPLEAAIVSLSVSKC 276
           ++ +I  G+    L+   G +  +G+G  G     +      PK V     +   SV+ C
Sbjct: 306 DVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVA-C 364

Query: 277 SEAHVLTVTSEGEVYSWGVGEHG-KLG-HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E     +T  GE+Y+WG  ++G  LG    + SQ  P+ I G L G  +  V+ G  H+
Sbjct: 365 GEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHT 424

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL----- 387
           A V+  G L+T+G+G  G LGHG+L S   P  V  L    V +V+CG  HT  +     
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIV 484

Query: 388 -----SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                +  G  +++ G G+ G+LGH D  K   P  +  L +    +V  G   +VALT 
Sbjct: 485 DRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTN 544

Query: 443 DGLVFWWGLGLRSSSISFHTP----VLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G  +     + H      V+V G L    + ++S G  HV AL+    +Y WG
Sbjct: 545 TGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWG 604

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
             T GQ G  N  +  + P+ V  L D+ V+ I  GS  + A  +   + ++S +    C
Sbjct: 605 KGTNGQLGLGNVEDR-NFPTLVEALRDMQVQSIACGSNLTAAICL---HKSISVSDQSAC 660

Query: 558 VDVR-PHTFT 566
              R P  FT
Sbjct: 661 KGCRMPFGFT 670



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 15/155 (9%)

Query: 394 VWSMGS--GNLG----KLGHEDTGKVTT--PKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
           +W  G   GN+G    + G+ +T +V    PK++E+     V  +  G   +  +T  G 
Sbjct: 266 IWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGE 325

Query: 446 VFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           VF WG G R        +   +P +V  L    +  V+ G+    AL+   E+YAWG N 
Sbjct: 326 VFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENK 385

Query: 501 MG-QCGQDNFSNPVDQPSKVVG-LEDVCVRQICAG 533
            G   G +  S     P ++ G L  VC+  +  G
Sbjct: 386 YGANLGCEERSRSQWLPRRISGPLTGVCILNVACG 420


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 51.2 bits (121), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY---GKRVTQVSA 329
           +T +++ P  + G  Y   G+R+  + +
Sbjct: 331 STSNRKSPFTVKGNWYPYNGQRLPDIDS 358


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QI+ V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSN--TDIDSTSTPKLTYNI-GDTDISVA 186
           + +I+ AC  Y  L       +   G  K       TD    ++P+L  ++ G   + VA
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 187 ----HSKVYT-------WGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
               HS V T       WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           YS+G+G +G+LG G+T +++ P  + G  Y
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QI+ V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSN--TDIDSTSTPKLTYNI-GDTDISVA 186
           + +I+ AC  Y  L       +   G  K       TD    ++P+L  ++ G   + VA
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 187 ----HSKVYT-------WGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
               HS V T       WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           YS+G+G +G+LG G+T +++ P  + G  Y
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  125 bits (314), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QI+ V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSN--TDIDSTSTPKLTYNI-GDTDISVA 186
           + +I+ AC  Y  L       +   G  K       TD    ++P+L  ++ G   + VA
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 187 ----HSKVYT-------WGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
               HS V T       WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           YS+G+G +G+LG G+T +++ P  + G  Y
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  125 bits (314), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 166/350 (47%), Gaps = 23/350 (6%)

Query: 186 AHSKVYTWGCNLHHQILDE-VRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLV 242
           A S +YTWG   ++++     R    +P L  +  N  I+ +  G   T +L   G L  
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G    G LG       PL     + +    L    C   H   +   G V++WG G++G
Sbjct: 68  FGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNG 127

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LGH +  ++  P  I    +  R  ++  G+  +AA+T+DGL YTWG G+HG+LG G L
Sbjct: 128 RLGHNDEQTRTIPCRIT---HLPRAHKIFCGYHITAAITDDGL-YTWGWGEHGQLGQGSL 183

Query: 360 KSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV-T 414
           +  + P  V    D    +  ++CG+ H LV ++ G  V++ GS   G+LG     ++ +
Sbjct: 184 EDSYGPKKVI-FDDANLAISQLACGDRHCLVRTESG-DVYTWGSNEFGQLGIGRYNEIYS 241

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI-----SFHTPVLVTGL 469
           +P ++ +L    V  V AG   S A+T  G +F WG G               P LV  L
Sbjct: 242 SPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESL 301

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
               I+ V  G +  +ALS+ N++Y +G+N+ GQ G D   +    P K+
Sbjct: 302 VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLG-DGSKSSCCTPRKL 350



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 13/304 (4%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           Y  G  G  + + QP   +V    AI  ++   C   H L +  +G ++S+G  ++G+LG
Sbjct: 21  YRLGRRGTRDDSCQPELIKVFENCAIQQVA---CGGGHTLVLLEDGCLHSFGYNQYGQLG 77

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           +G  +               ++  V+ G  HSAA+  +G ++TWG G +GRLGH D ++R
Sbjct: 78  NGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTR 137

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS-GNLGKLGHEDTGKVTTPKVIEA 421
             P  +T L     + CG   T  ++ DG   W  G  G LG+   ED+      KVI  
Sbjct: 138 TIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSLEDS--YGPKKVIFD 195

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
                + ++  G    +  T  G V+ WG      LG+   +  + +PVL+T L+   + 
Sbjct: 196 DANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVT 255

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            V+ GD H  A++    ++ WG    GQCG  ++ N  D P  V  L  V + ++  G  
Sbjct: 256 FVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDY-NDCDMPFLVESLVGVFILKVFCGHN 314

Query: 536 FSIA 539
           F++A
Sbjct: 315 FTVA 318



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 19/268 (7%)

Query: 290 VYSWGVGEHGKLGHGNTLSQR-RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           +Y+WG  ++ +LG   T     +P+LI        + QV+ G  H+  + EDG L+++G 
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKV-FENCAIQQVACGGGHTLVLLEDGCLHSFGY 70

Query: 349 GDHGRLGHGDL------KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
             +G+LG+G         SR   +L  +L    AV+CG  H+  L  +G TV++ G G  
Sbjct: 71  NQYGQLGNGTKVDSPLDASRDISSLSNKLI---AVACGRYHSAALDVNG-TVFTWGGGKN 126

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW-WG----LGLRSSS 457
           G+LGH D    T P  I  L   R  K+  G   + A+T DGL  W WG    LG  S  
Sbjct: 127 GRLGHNDEQTRTIPCRITHLP--RAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSLE 184

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            S+    ++   ++  I  ++ GD H L  ++  +VY WGSN  GQ G   ++     P 
Sbjct: 185 DSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPV 244

Query: 518 KVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            +  L  + V  + AG   S A T   S
Sbjct: 245 LLTSLAGMMVTFVAAGDRHSAAVTNTGS 272


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 122/240 (50%), Gaps = 9/240 (3%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + ++S+G+VY+ G G  G LGH N  +  R  L++  L   +VTQV A  +HS 
Sbjct: 108 CGYFHSMVISSKGQVYTCGRGYKGFLGHKNQ-NNIRSFLLVDALASLKVTQVCAARNHSL 166

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHT 393
            VT DG +Y++G   HGRLGHGD   R  PT++  L     V  +C  +H  VL+  G  
Sbjct: 167 VVTSDGQVYSFGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQ- 225

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           V+  GSG  GKLG  D      P ++ AL    ++ +  G  F+ A+  +G +F WG GL
Sbjct: 226 VFMWGSGTDGKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGL 285

Query: 454 RSSSISFH-----TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                         P LVT L+   I  ++ G  H+ A+S  N +Y WG N  GQ G  +
Sbjct: 286 GGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGD 345



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 126/233 (54%), Gaps = 6/233 (2%)

Query: 222 RHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-- 279
           + +  G F + ++ S G +   G+G+ G      Q   +   L  A+ SL V++   A  
Sbjct: 104 KSVVCGYFHSMVISSKGQVYTCGRGYKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARN 163

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L VTS+G+VYS+G  +HG+LGHG+   +R P +I  GL GK+V Q +   +H+A +T+
Sbjct: 164 HSLVVTSDGQVYSFGFPKHGRLGHGDDAYRRLPTMIE-GLRGKKVVQTTCFGAHNAVLTD 222

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSM 397
            G ++ WG G  G+LG GD +S   P LV  L   G  ++ CG      ++ +GH +++ 
Sbjct: 223 AGQVFMWGSGTDGKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGH-LFTW 281

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G G  G+LGH D    T P ++ AL +  +R +  G     A++   +++ WG
Sbjct: 282 GHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWG 334



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 12/250 (4%)

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLY--GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           G+G  G+LGHG+    R P L+   L+  G +   V  G+ HS  ++  G +YT G G  
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQS-LHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYK 130

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           G LGH +  +  +  LV  L+   V  V    +H+LV++ DG  V+S G    G+LGH D
Sbjct: 131 GFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQ-VYSFGFPKHGRLGHGD 189

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPV 464
                 P +IE LR  +V +     + +  LT  G VF WG G      +  + S   PV
Sbjct: 190 DAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHFAPV 249

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
           LV  L    I  +  G     A++    ++ WG    G+ G  +  N    PS V  L +
Sbjct: 250 LVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRT-VPSLVTALAE 308

Query: 525 VCVRQICAGS 534
           V +R I  G+
Sbjct: 309 VPIRAIACGA 318


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|365122388|ref|ZP_09339291.1| hypothetical protein HMPREF1033_02637 [Tannerella sp.
           6_1_58FAA_CT1]
 gi|363642628|gb|EHL81974.1| hypothetical protein HMPREF1033_02637 [Tannerella sp.
           6_1_58FAA_CT1]
          Length = 883

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 29/342 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           ++ WG N   Q+ D    +   P    + + +  + AGQ  T  + + G L   G  + G
Sbjct: 401 LWGWGANTLGQLGDGTTTRRHSP--VKIMNGVLSVSAGQNYTMAIKADGSLWACGSNYSG 458

Query: 250 -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            L + TI    +  P++     LSVS  ++   L + ++  ++ WG    G LG G T  
Sbjct: 459 ELGDGTITE--RHFPVKVMNDVLSVS--TDVSTLAIKTDDSLWGWGANVRGLLGDGTTTE 514

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           +  P  IM       V  VS     + AV  DG L+ WG+   G+LG G    RH+P  +
Sbjct: 515 RHSPVKIM-----NDVLSVSTRVFQTLAVKTDGSLWGWGDNTFGQLGDGTTTERHSPVKI 569

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
            E  DV +VS G+ HTL +  DG ++W+ G  + G+LG   T +  +P  +       V 
Sbjct: 570 ME--DVLSVSAGDDHTLAIKTDG-SLWAWGGNSFGQLGDGTTTERHSPVKVMG----DVL 622

Query: 429 KVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSH 483
            V AG   ++A+  DG ++ WG   R      ++   H+PV +       ++ VS GD  
Sbjct: 623 SVSAGDDHTLAIKADGSLWGWGANSRGQLGDGTTTEKHSPVKIM----EDVLSVSAGDDC 678

Query: 484 VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
            +A+     ++AWG N+ GQ G D  +     P K++G  D+
Sbjct: 679 TMAIKTDGSLWAWGRNSFGQLG-DGTTTERHSPVKIMGGTDL 719



 Score =  100 bits (250), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 27/257 (10%)

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
           +VS    +H L V ++G ++ WG    G+LG G T  +  P  IM G     V  VSAG 
Sbjct: 383 NVSTRGGSHTLAVKTDGSLWGWGANTLGQLGDGTTTRRHSPVKIMNG-----VLSVSAGQ 437

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG 391
           +++ A+  DG L+  G    G LG G +  RH P  V  ++DV +VS  +  TL +  D 
Sbjct: 438 NYTMAIKADGSLWACGSNYSGELGDGTITERHFPVKV--MNDVLSVST-DVSTLAIKTD- 493

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            ++W  G+   G LG   T +  +P K++  +     R        ++A+  DG ++ WG
Sbjct: 494 DSLWGWGANVRGLLGDGTTTERHSPVKIMNDVLSVSTRVFQ-----TLAVKTDGSLWGWG 548

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                 LG   ++   H+PV +       ++ VS GD H LA+     ++AWG N+ GQ 
Sbjct: 549 DNTFGQLG-DGTTTERHSPVKIM----EDVLSVSAGDDHTLAIKTDGSLWAWGGNSFGQL 603

Query: 505 GQDNFSNPVDQPSKVVG 521
           G D  +     P KV+G
Sbjct: 604 G-DGTTTERHSPVKVMG 619


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 18  YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 76

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 77  HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 133

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 134 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 192

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 193 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 251

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 252 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 310

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 311 GRQHTSAF-VPSSGRIYS 327



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 64  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 123

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 124 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 182

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 183 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 241

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 242 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 300

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 301 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 352

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 353 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 386

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 387 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 419



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 69  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 126

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 127 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 185 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 243

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 244 LLKSLRSQKIVYICCGEDHTAALT 267


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYCHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|383320311|ref|YP_005381152.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
 gi|379321681|gb|AFD00634.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
          Length = 428

 Score =  125 bits (313), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 111/353 (31%), Positives = 163/353 (46%), Gaps = 44/353 (12%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQP---LPKRVPLEAAIV 269
           + S    +  I AG+F   +L   G +  +G    G LA +T      L  R+ +   + 
Sbjct: 22  VNSASQKVEEISAGEFHNIVLCDDGTIWEWGNNSSGQLAESTDDTKYLLIHRLNM-TGVK 80

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
           S+S       H L +  +G V++WG   +G+LG G  +++  P  +        VT + A
Sbjct: 81  SVSAGM---YHNLALKDDGTVWAWGYNRNGQLGDGTKITRSTPVQV----NISNVTAIFA 133

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQ 389
           G   S A+ +DG L+ WG   +G+LG G   +R +P  +  + +V  VS     T+ L  
Sbjct: 134 GGLDSFALKDDGTLWGWGANFYGQLGDGTNITRLSPVRIP-IDNVKVVSSKGGSTIALKD 192

Query: 390 DGHTVWSMGSG----------NLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSV 438
           DG TVW+ G              G LG   T K V +P  +  L    V+ V AG +F++
Sbjct: 193 DG-TVWAWGCNIFAEDQEGRYQTGCLGVNSTDKFVLSPARVGGLDN--VKDVDAGGTFTI 249

Query: 439 ALTWDGLVFWWGLGLRSS-SISFH-----------TPVLVTGLSSHQIVDVSIGDSHVLA 486
           AL  DG V+ WG G +      F            TP+ V GLS   IVD+S GD H +A
Sbjct: 250 ALKNDGTVWAWGDGSQGQLGKGFKMNGPLDDPYQSTPIQVIGLSD--IVDISAGDRHAMA 307

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           L     ++ WG N MG+ G  ++ N    P K V LEDV    I AG + S+A
Sbjct: 308 LKDDGTIWTWGYNMMGELGDGSYWNTKPSPVK-VNLEDVIA--ISAGGMHSLA 357



 Score =  104 bits (259), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 85/300 (28%), Positives = 136/300 (45%), Gaps = 34/300 (11%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           VP+ +A   +      E H + +  +G ++ WG    G+L      ++    L++  L  
Sbjct: 20  VPVNSASQKVEEISAGEFHNIVLCDDGTIWEWGNNSSGQLAESTDDTKY---LLIHRLNM 76

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE 381
             V  VSAG  H+ A+ +DG ++ WG   +G+LG G   +R TP  V  +S+V A+  G 
Sbjct: 77  TGVKSVSAGMYHNLALKDDGTVWAWGYNRNGQLGDGTKITRSTPVQVN-ISNVTAIFAGG 135

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
             +  L  DG T+W  G+   G+LG        +P  I       V+ V +    ++AL 
Sbjct: 136 LDSFALKDDG-TLWGWGANFYGQLGDGTNITRLSPVRIPI---DNVKVVSSKGGSTIALK 191

Query: 442 WDGLVFWWG----------------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
            DG V+ WG                LG+ S+     +P  V GL +  + DV  G +  +
Sbjct: 192 DDGTVWAWGCNIFAEDQEGRYQTGCLGVNSTDKFVLSPARVGGLDN--VKDVDAGGTFTI 249

Query: 486 ALSQYNEVYAWGSNTMGQCGQD-NFSNPVDQPS-----KVVGLEDVCVRQICAGSLFSIA 539
           AL     V+AWG  + GQ G+    + P+D P      +V+GL D+    I AG   ++A
Sbjct: 250 ALKNDGTVWAWGDGSQGQLGKGFKMNGPLDDPYQSTPIQVIGLSDIV--DISAGDRHAMA 307



 Score = 77.4 bits (189), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 31/246 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG---- 244
           ++ WG N + Q+ D      +R     +P  N++ + +    T  L   G +  +G    
Sbjct: 147 LWGWGANFYGQLGDGT--NITRLSPVRIPIDNVKVVSSKGGSTIALKDDGTVWAWGCNIF 204

Query: 245 ---------KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
                     G LG+ +T    L P RV     + ++          + + ++G V++WG
Sbjct: 205 AEDQEGRYQTGCLGVNSTDKFVLSPARV---GGLDNVKDVDAGGTFTIALKNDGTVWAWG 261

Query: 295 VGEHGKLGHGNTLS-------QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
            G  G+LG G  ++       Q  P  ++G      +  +SAG  H+ A+ +DG ++TWG
Sbjct: 262 DGSQGQLGKGFKMNGPLDDPYQSTPIQVIGL---SDIVDISAGDRHAMALKDDGTIWTWG 318

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
               G LG G   +     +   L DV A+S G  H+L L +DG +VW+ G    G++G 
Sbjct: 319 YNMMGELGDGSYWNTKPSPVKVNLEDVIAISAGGMHSLALKKDG-SVWAWGGNYYGEVGD 377

Query: 408 EDTGKV 413
             T  V
Sbjct: 378 GSTDDV 383


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 156/337 (46%), Gaps = 38/337 (11%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y+WG G +  G LGHGN +S   PK + G L G  V+ +S G  H
Sbjct: 369 CGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWH 428

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD KS   P  V  L  +  V  +CG  HT  + +  
Sbjct: 429 TAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVM 488

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
                        +++ G G+ G+LGH D   K+   +V     K    +V  G S +VA
Sbjct: 489 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTVA 548

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVT-GLSSHQIVDVSIGDSHVLALSQYNE 492
           LT  G V+  G      LG+  +      P+ V   LS   + +++ G  HV  L+   E
Sbjct: 549 LTTKGHVYTMGSPVYGQLGIPQADGKL--PICVEWKLSESFVEEIACGAYHVAVLTSRTE 606

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSA 552
           VY WG    G+ G  + ++  + P+ V  L+D  V+ I  G+ F+ A  +   +  +S  
Sbjct: 607 VYTWGKGANGRLGHGD-TDDRNTPTLVEALKDKDVKSIACGTNFTAAICL---HKWVSGV 662

Query: 553 FTPLCVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
              +C   R P  F   R        C+  G  + FC
Sbjct: 663 DQSMCSGCRMPFNFKRKRH------NCYNCG--LVFC 691



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 158/332 (47%), Gaps = 37/332 (11%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
             ++++WG     ++   V      P+L ++L  +NI  +  G++ T  +  +G L  +G
Sbjct: 328 QGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWG 387

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            G      LG  N     +PKRV  PLE   + +S   C   H   VTS G+++++G G 
Sbjct: 388 NGTYNCGLLGHGNQVSHWVPKRVNGPLEG--IHVSYISCGPWHTAVVTSAGQLFTFGDGT 445

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 446 FGALGHGDRKSVSLPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 504

Query: 346 WGEGDHGRLGHGDLKSRHTPT---LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           WG+GD GRLGHGD +++  PT   LV    +   V+CG S T+ L+  GH V++MGS   
Sbjct: 505 WGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGH-VYTMGSPVY 563

Query: 403 GKLG-HEDTGKVTTPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----S 455
           G+LG  +  GK+  P  +E  L +  V ++  G      LT    V+ WG G        
Sbjct: 564 GQLGIPQADGKL--PICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHG 621

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            +   +TP LV  L    +  ++ G +   A+
Sbjct: 622 DTDDRNTPTLVEALKDKDVKSIACGTNFTAAI 653



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 121/267 (45%), Gaps = 28/267 (10%)

Query: 264 LEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           LE+A+V L V    C   H   VT +GE++SWG    G+LGHG       PKLI   L  
Sbjct: 304 LESAVV-LDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIE-ALSN 361

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--GRLGHGDLKSRHTPTLVT---ELSDVGA 376
             +  V+ G  H+ AVT  G LYTWG G +  G LGHG+  S   P  V    E   V  
Sbjct: 362 TNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSY 421

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           +SCG  HT V++  G  +++ G G  G LGH D   V+ P+ +E+L+  R  +   G   
Sbjct: 422 ISCGPWHTAVVTSAGQ-LFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWH 480

Query: 437 SVALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLS-SHQIVDVS 478
           + A+               G +F WG G +         +   P  V  ++       V+
Sbjct: 481 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVA 540

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G S  +AL+    VY  GS   GQ G
Sbjct: 541 CGHSLTVALTTKGHVYTMGSPVYGQLG 567


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 8/148 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY---GKRVTQVSA 329
           +T +++ P  + G  Y   G+R+  + +
Sbjct: 331 STSNRKSPFTVKGNWYPYNGQRLPDIDS 358


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 176/395 (44%), Gaps = 39/395 (9%)

Query: 189 KVYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++Y WG   H Q+    +++ +    R    +  + ++ +  G   T  L +TG +   G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 245 KG-WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              +  L +      P+ +P     V + +S C   H L ++  G+V SWG  + G+LGH
Sbjct: 66  SNDYSQLGHDLPTKRPQLIPELQDYVIIQIS-CGSRHSLALSDWGQVLSWGDNDCGQLGH 124

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HGDLK 360
                  +   ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG     DL 
Sbjct: 125 ATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184

Query: 361 SRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             + P  +T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D      P  
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDETNRAYPTQ 243

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQ 473
           ++ LR   VR    G  FSV LT +G VF  G G         S +   P +V  L    
Sbjct: 244 LKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST 303

Query: 474 IVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSN---------PVDQPSKVVGLE 523
           I  V+ G+ H LA      +VYA+G  + GQ G  +  +         P   PS    L+
Sbjct: 304 ITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSAQLQ 363

Query: 524 ------DVCVRQICAGSLFSIAYT------VPPSN 546
                  + +RQI +G   SI  T      VPP +
Sbjct: 364 SNDSQVSLVIRQIFSGGDQSIVTTTLFIDKVPPED 398



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 135/271 (49%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P+ I        V QVS GH H+  +T  G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVSCGHRHTLFLTATG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  D+ +LGH DL ++  P L+ EL D  +  +SCG  H+L LS  G  V S G 
Sbjct: 60  KVYACGSNDYSQLGH-DLPTKR-PQLIPELQDYVIIQISCGSRHSLALSDWGQ-VLSWGD 116

Query: 400 GNLGKLGHEDTGKVTT-PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LGH    ++   PKV+  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + S +   H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G ++ +
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N    P+++  L  + VR    G  FS+  T
Sbjct: 237 NRA-YPTQLKTLRTLGVRFAACGDEFSVFLT 266


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGL 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 48.9 bits (115), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 169/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + +     YN          GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 NWL----PYN----------GQC-----------PPDIDSEEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 CSPQNCGPPDDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|219669317|ref|YP_002459752.1| cell wall binding repeat 2-containing protein [Desulfitobacterium
           hafniense DCB-2]
 gi|219539577|gb|ACL21316.1| putative cell wall binding repeat 2-containing protein
           [Desulfitobacterium hafniense DCB-2]
          Length = 706

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 132/259 (50%), Gaps = 16/259 (6%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G+V + G  ++G+LG G T+S+  P + +  LY  RV  +SAG +H+ A+ +D  +  WG
Sbjct: 66  GDVTASGNNDYGQLGDGTTISRSLP-VTINNLY-SRVADISAGGTHNLALIDDQTVRAWG 123

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
               G+LG G   +   P  V  LS++ A+S G   +L L  DG TV+S GS    +LG 
Sbjct: 124 NNQKGQLGIGSDINSLIPVEVPGLSEIIAISSGFDFSLALKNDG-TVYSFGSNEFNQLGD 182

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHT 462
              G   TP  I  L    +  + AG + ++AL  DG V+ WG   R       S S + 
Sbjct: 183 SSVGSRNTPAQIPGLDS--IVAIAAGGTHALALHMDGSVYAWGSNERGELGDGGSASGYQ 240

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           PV +  LS   I  +S G  H LAL     VYAWG N++GQ G    S+  + P KV G+
Sbjct: 241 PVKIASLS--NITAISAGLRHCLALGADGSVYAWGDNSLGQLGDPKISDYSNVPIKVQGI 298

Query: 523 EDVCVRQICAG--SLFSIA 539
           +     +I AG  S F IA
Sbjct: 299 K--AAFRIAAGYNSSFIIA 315



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 30/329 (9%)

Query: 194 GCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLG 249
           G N + Q+ D      S P  + +L S +  I AG      L     +  +G   KG LG
Sbjct: 72  GNNDYGQLGDGTTISRSLPVTINNLYSRVADISAGGTHNLALIDDQTVRAWGNNQKGQLG 131

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
           + +     +P  VP  + I+++S         L + ++G VYS+G  E  +LG  +  S+
Sbjct: 132 IGSDINSLIPVEVPGLSEIIAIS---SGFDFSLALKNDGTVYSFGSNEFNQLGDSSVGSR 188

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
             P  I G      +  ++AG +H+ A+  DG +Y WG  + G LG G   S + P  + 
Sbjct: 189 NTPAQIPGL---DSIVAIAAGGTHALALHMDGSVYAWGSNERGELGDGGSASGYQPVKIA 245

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT-PKVIEALR-KFRV 427
            LS++ A+S G  H L L  DG +V++ G  +LG+LG       +  P  ++ ++  FR 
Sbjct: 246 SLSNITAISAGLRHCLALGADG-SVYAWGDNSLGQLGDPKISDYSNVPIKVQGIKAAFR- 303

Query: 428 RKVCAGTSFSVALTWDGLVFWWGLG----LRSSSI-SFHTPVLVTGLSSHQIVDVSIGDS 482
             + AG + S  +      + +G      + SS++ +  +P L+   +S     +S G  
Sbjct: 304 --IAAGYNSSFIIAQQNATYGFGDNSANQINSSAVENLSSPTLLNIKASF----ISPGWG 357

Query: 483 HVLA---LSQYNEV--YAWGSNTMGQCGQ 506
           H ++   L   N V  ++WG N  GQ G 
Sbjct: 358 HTVSRGFLGNDNGVDNWSWGYNQFGQTGN 386



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 14/234 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VY++G N  +Q+ D   G  + P       +I  I AG      L   G +  +G   +G
Sbjct: 169 VYSFGSNEFNQLGDSSVGSRNTPAQIPGLDSIVAIAAGGTHALALHMDGSVYAWGSNERG 228

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   +     P ++   A++ +++       H L + ++G VY+WG    G+LG    
Sbjct: 229 ELGDGGSASGYQPVKI---ASLSNITAISAGLRHCLALGADGSVYAWGDNSLGQLGDPKI 285

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                  + + G+  K   +++AG++ S  + +    Y +G+    ++    +++  +PT
Sbjct: 286 SDYSNVPIKVQGI--KAAFRIAAGYNSSFIIAQQNATYGFGDNSANQINSSAVENLSSPT 343

Query: 367 LVTELSDVGAVSCGESHT----LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           L+   +    +S G  HT     + + +G   WS G    G+ G+  T  V  P
Sbjct: 344 LLNIKASF--ISPGWGHTVSRGFLGNDNGVDNWSWGYNQFGQTGNGLTEHVLNP 395


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 67/299 (22%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG--------------------- 317
           AH+  ++  G++++WG G++G+LGHG+  S   PK ++                      
Sbjct: 139 AHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSH 198

Query: 318 ----GLY------------------------------GKRVTQVSAGHSHSAAVTEDGLL 343
               GLY                               KR+  + AG S +A +   G L
Sbjct: 199 TAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGAL 258

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           +TWG GDHGRLGHGD ++R+ PTLV+ L    V AV+ G  H+L L++ G  ++S G G 
Sbjct: 259 FTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGE-LFSWGRGE 317

Query: 402 LGKLGHED-TGKVTTPKVIEALRKF-RVRKVCAGTSFSVALTWDGLVFWWGL---GL--- 453
            G+LGH     +   PK ++      ++  + AG   SVA   DG V+ WG+   G+   
Sbjct: 318 NGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGT 377

Query: 454 -RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             S   + + P  +      +   +S G  H +AL+  N +Y+WG    G+ G  N  N
Sbjct: 378 GDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 11/229 (4%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSC 379
           +R+  V+AG +H A +++ G L+TWGEG +GRLGHGD +S  TP  V  L+++    V C
Sbjct: 129 ERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFC 188

Query: 380 GESHTLVLSQD-GHTVWSMGSGNLGKLGHEDTGKVTT--PKVIEALRKFRVRKVCAGTSF 436
           G   T+ LS   G  +++ G+   G+LG  D G   T  P+ +      R+  + AG S 
Sbjct: 189 GGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASR 248

Query: 437 SVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +  +   G +F WG G         + + + P LV+ L  H +V V++G  H LAL++  
Sbjct: 249 AAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAG 308

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV-CVRQICAGSLFSIA 539
           E+++WG    GQ G  ++ +    P ++    D+  +  I AG   S+A
Sbjct: 309 ELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVA 357



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 130/317 (41%), Gaps = 92/317 (29%)

Query: 165 DIDSTSTPKLTYNI-----------GDTDISVAH---SKVYTWGCNLHHQILDEVRGKCS 210
           D +S STPK    +           G + I+++H   S +YTWG N   Q+    RG C 
Sbjct: 165 DEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQL---GRGDCG 221

Query: 211 R-----PRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPK 260
                 P   ++P   R   ++AG     ++DS+G L  +G+G    LG  +T  +  P 
Sbjct: 222 DDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPT 281

Query: 261 RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR---------- 310
            V      V ++V+     H L +T  GE++SWG GE+G+LGHG+  SQ+          
Sbjct: 282 LVSSLYGHVVVAVA-LGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFV 340

Query: 311 -RPKLI---MGGLY-----------------------------------------GKRVT 325
             PK+I    GG +                                         G R  
Sbjct: 341 DMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFK 400

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT---------LVTELSDVGA 376
            +S G  H+ A+T D  +Y+WG G  GRLG  + K++  P          +V    ++  
Sbjct: 401 TISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNIPNYQPVVFSAGEIST 460

Query: 377 VSCGESHTLVLSQDGHT 393
           +  G+ +T+V +  G T
Sbjct: 461 IVIGKKNTVVATSSGLT 477


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIIQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QI+ V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 130 VDLIRSACLVYLILVTLADDNIKPLGDRKSSNSN--TDIDSTSTPKLTYNI-GDTDISVA 186
           + +I+ AC  Y  L       +   G  K       TD    ++P+L  ++ G   + VA
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 187 ----HS-------KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFL 233
               HS        ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAA 256

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEV 290
           L   GG+  +G G  G    N+T   +  R   E     ++   C   H    V S G +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           YS+G+G +G+LG G+T +++ P  + G  Y
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVKGNWY 346


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 169/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + +     YN          GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 NWL----PYN----------GQC-----------PPDIDSEEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 CSPQNCGPPDDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 135/267 (50%), Gaps = 14/267 (5%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           +    H + ++  GEVY WG  E G+ G GN  +Q  P + M     K +  VS G  HS
Sbjct: 146 RTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLP-IRMEFFRDKSIVDVSCGLDHS 204

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           AAV++DG ++TWG G  G+LGH   +    P  +T +   G   V+CG   T +L++   
Sbjct: 205 AAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEG 264

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            +++ G+G  G+LGH + G    P V+       V++V AG +  +ALT DG  + WG G
Sbjct: 265 RLFTFGNGEAGQLGHGERGLCLEPSVVPL---DNVKEVAAGGAHMLALTKDGQAWSWGWG 321

Query: 453 -----LRSSSISFHTPVLVTGLS-SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                   ++  F  P  +  L  +  +V VS G  H LAL++  +VY WG N  G+ G 
Sbjct: 322 EDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGL 381

Query: 507 DNFSNPVDQPSKVVGLEDVCV-RQICA 532
            N S+ V  P+ +  L D  V R IC 
Sbjct: 382 GNESS-VMTPTLIKALADKRVLRAICG 407



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 106/212 (50%), Gaps = 16/212 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDST-GGLLVYG 244
            +V+TWG  +  Q+         +P+  ++     I  +  G   T LL+ T G L  +G
Sbjct: 211 GRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFG 270

Query: 245 KGWLGLANTTIQPL---PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G  G      + L   P  VPL+    ++       AH+L +T +G+ +SWG GE G+L
Sbjct: 271 NGEAGQLGHGERGLCLEPSVVPLD----NVKEVAAGGAHMLALTKDGQAWSWGWGEDGRL 326

Query: 302 GHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           GHG T    +P+ I  +G   G  V  VSAG  HS A+TE G +Y WG    GRLG G+ 
Sbjct: 327 GHGATEDFLKPEPIPTLGPAVG--VVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNE 384

Query: 360 KSRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
            S  TPTL+  L+D  V    CG  H+L ++Q
Sbjct: 385 SSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 140/316 (44%), Gaps = 70/316 (22%)

Query: 189 KVYTWGCNLHHQILDEVRGK-CSRPRL----QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           ++Y WG +  + +L   R K    P L    QSL   I  I  G+     L   G + ++
Sbjct: 107 ELYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSL--GIVKIRTGRQHGIALSKNGEVYIW 164

Query: 244 GK---GWLGLANTTIQPLPKRVPL--EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G    G  GL N   Q LP R+    + +IV +S   C   H   V+ +G V++WG G  
Sbjct: 165 GNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVS---CGLDHSAAVSKDGRVWTWGYGID 221

Query: 299 GKLGHGNTLSQRRPK---LIMG-------------GL--------------------YGK 322
           G+LGH  T  + +PK   +I G             GL                    +G+
Sbjct: 222 GQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGE 281

Query: 323 R-------------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD----LKSRHTP 365
           R             V +V+AG +H  A+T+DG  ++WG G+ GRLGHG     LK    P
Sbjct: 282 RGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIP 341

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
           TL   +  V +VS G  H+L L++ G  V+  G    G+LG  +   V TP +I+AL   
Sbjct: 342 TLGPAVGVV-SVSAGGGHSLALTESGQ-VYGWGFNASGRLGLGNESSVMTPTLIKALADK 399

Query: 426 RVRKVCAGTSFSVALT 441
           RV +   G   S+ +T
Sbjct: 400 RVLRAICGLDHSLFIT 415


>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1264

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 184/411 (44%), Gaps = 84/411 (20%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQ-----SLPSNIRHIEAGQFC-----TFLLDSTGG 239
            +Y WG            GK  R  ++       P  I +I+A Q       +  + + G 
Sbjct: 862  IYIWG-----------NGKDGRLGIEGEKPFKFPQIIPNIQACQVSLGYHHSACISNQGQ 910

Query: 240  LLVYGKGWLG-LANTTIQ----PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            +L +G+G  G L +++ +    P P     + +IVS+    C   H L ++++G V+SWG
Sbjct: 911  ILTWGRGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVG---CGWQHTLALSNDGRVFSWG 967

Query: 295  VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             GE G+LG G+  SQ  P+ I   L G  VTQ++AGHSHS+ +T +G+   +G     RL
Sbjct: 968  FGEDGQLGLGDYQSQNSPQFI-NSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRL 1026

Query: 355  GHGDLKSRHTPTLVTEL--------SDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGK 404
             +   +++  P  +TEL        SD  AV  S G +H+ V++++G+ +++ G GN G+
Sbjct: 1027 MNKTNQNQFLPC-ITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGN-LYTSGLGNEGQ 1084

Query: 405  LG---HEDT----------------GKVTTP---------------KVIEALRKFRVRKV 430
            LG    EDT                 K                   KV    +K +  +V
Sbjct: 1085 LGSFISEDTPNSLMIQKNSNEMSEYSKFEEEQQENQDQFDRICYFNKVNFFNKKNKAIQV 1144

Query: 431  CAGTSFSVALTWDGLVFWWGLG--LRSSSISFHT------PVLVTGLSSHQIVDVSIGDS 482
              G SF++ +     V+ +G G   R   +   T      P L+  L + +I  VS G  
Sbjct: 1145 SCGDSFTLVINEQSQVYSFGKGSYYRLGHLDIQTNQNVYEPKLIESLKNFKITSVSTGCR 1204

Query: 483  HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            H +A++   +VY WG N   Q G  +      QP+KV  L  + V+Q   G
Sbjct: 1205 HAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQQPTKVTKLSGLNVKQSSCG 1255



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 19/232 (8%)

Query: 288  GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
            G +Y WG G+ G+LG       + P++I       +  QVS G+ HSA ++  G + TWG
Sbjct: 860  GIIYIWGNGKDGRLGIEGEKPFKFPQIIPN----IQACQVSLGYHHSACISNQGQILTWG 915

Query: 348  EGDHGRLGHGDLKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGHTVWSMGSGNLGKL 405
             G+ G+LGH   ++   PT V   S +  VS  CG  HTL LS DG  V+S G G  G+L
Sbjct: 916  RGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGR-VFSWGFGEDGQL 974

Query: 406  GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--RSSSISFHTP 463
            G  D     +P+ I +L  + V ++ AG S S  +T +G+   +G  +  R  + +    
Sbjct: 975  GLGDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRLMNKTNQNQ 1034

Query: 464  VL--VTGL--------SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             L  +T L        S +  V  S+G +H   +++   +Y  G    GQ G
Sbjct: 1035 FLPCITELEFLRQEYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEGQLG 1086



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 156/386 (40%), Gaps = 77/386 (19%)

Query: 172  PKLTYNIGDTDISVAH---------SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR 222
            P++  NI    +S+ +          ++ TWG     Q+       C  P   +  S + 
Sbjct: 884  PQIIPNIQACQVSLGYHHSACISNQGQILTWGRGNRGQLGHSSFENCLLPTPVNFFSKMS 943

Query: 223  HIEAGQFC----TFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRV-PLEAAIVSLSVS 274
             +  G  C    T  L + G +  +G    G LGL +   Q  P+ +  LE   V+    
Sbjct: 944  IVSVG--CGWQHTLALSNDGRVFSWGFGEDGQLGLGDYQSQNSPQFINSLEGYFVT--QI 999

Query: 275  KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKL----IMGGLYGKRVTQVSA- 329
                +H   +TSEG    +G     +L +    +Q  P +     +   YG     V A 
Sbjct: 1000 NAGHSHSSVITSEGIFMMFGCNIDHRLMNKTNQNQFLPCITELEFLRQEYGSDYNAVKAS 1059

Query: 330  -GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV------TELSDVGA------ 376
             G +HSA +T++G LYT G G+ G+LG     S  TP  +       E+S+         
Sbjct: 1060 LGVNHSAVITKNGNLYTSGLGNEGQLG--SFISEDTPNSLMIQKNSNEMSEYSKFEEEQQ 1117

Query: 377  --------------------------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED- 409
                                      VSCG+S TLV+++    V+S G G+  +LGH D 
Sbjct: 1118 ENQDQFDRICYFNKVNFFNKKNKAIQVSCGDSFTLVINEQSQ-VYSFGKGSYYRLGHLDI 1176

Query: 410  --TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
                 V  PK+IE+L+ F++  V  G   +VA+T DG V+ WG      LGL  S   + 
Sbjct: 1177 QTNQNVYEPKLIESLKNFKITSVSTGCRHAVAITNDGKVYTWGFNFYDQLGLGDSEKDYQ 1236

Query: 462  TPVLVTGLSSHQIVDVSIGDSHVLAL 487
             P  VT LS   +   S G  H   L
Sbjct: 1237 QPTKVTKLSGLNVKQSSCGYFHTSVL 1262



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 11/179 (6%)

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            +G++Y WG G  GRLG    K    P ++  +     VS G  H+  +S  G  + + G 
Sbjct: 859  NGIIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQ-ACQVSLGYHHSACISNQGQ-ILTWGR 916

Query: 400  GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS--- 456
            GN G+LGH        P  +    K  +  V  G   ++AL+ DG VF WG G       
Sbjct: 917  GNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGFGEDGQLGL 976

Query: 457  --SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT----MGQCGQDNF 509
                S ++P  +  L  + +  ++ G SH   ++       +G N     M +  Q+ F
Sbjct: 977  GDYQSQNSPQFINSLEGYFVTQINAGHSHSSVITSEGIFMMFGCNIDHRLMNKTNQNQF 1035



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 9/155 (5%)

Query: 384  TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            TL   Q    ++  G+G  G+LG E       P++I  ++     +V  G   S  ++  
Sbjct: 852  TLQKPQYNGIIYIWGNGKDGRLGIEGEKPFKFPQIIPNIQ---ACQVSLGYHHSACISNQ 908

Query: 444  GLVFWWGLGLRSS--SISFHT---PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            G +  WG G R      SF     P  V   S   IV V  G  H LALS    V++WG 
Sbjct: 909  GQILTWGRGNRGQLGHSSFENCLLPTPVNFFSKMSIVSVGCGWQHTLALSNDGRVFSWGF 968

Query: 499  NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
               GQ G  ++ +  + P  +  LE   V QI AG
Sbjct: 969  GEDGQLGLGDYQSQ-NSPQFINSLEGYFVTQINAG 1002


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|145534436|ref|XP_001452962.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420662|emb|CAK85565.1| unnamed protein product [Paramecium tetraurelia]
          Length = 995

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 56/353 (15%)

Query: 168 STSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP-------SN 220
           ST+TPK T            + ++ WG            G+     L S P        N
Sbjct: 601 STNTPKFT--------ERDKTALFVWGSGKD--------GRLGTGSLASQPIPYKIQIQN 644

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
           ++ I  G + +  ++    LL++GK +           P++ P    I+ ++   C   H
Sbjct: 645 LQSISCGYYHSAAINIEQQLLIWGKNY--------DLTPQKQPQFNNIIQVA---CGCQH 693

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
            L + S G+V+SWG+G+ G+LG+ +  +   P  I+      ++  + A  SHSAA+ +D
Sbjct: 694 TLILDSLGQVFSWGIGDEGQLGNESYFNSDEPIKILD-----KIIYIEASRSHSAAINKD 748

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
            L Y+WG     RLG  + K+ + PT  +    V  +S G +H+  + QDG  V++ G+G
Sbjct: 749 NLFYSWGSNIDYRLGLEEKKNYNVPT--STGIKVSKISLGTNHSAFIRQDG-IVFTTGNG 805

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
             G+LG+    K+ +   +    + +   V  G   ++ +  +G VF  G      LG  
Sbjct: 806 QQGQLGN----KINSDCYLNLQLEMKAVDVVCGEDITLFINNNGDVFSCGKKSNGNLGHL 861

Query: 455 SSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            S+I     TP  + GLS  +I  +S+G  H LA+S   +V+ WG N   Q G
Sbjct: 862 MSTIPAFLQTPKQIEGLS--KIKQISVGKRHCLAISSCKQVWGWGFNFFDQLG 912


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 179/406 (44%), Gaps = 46/406 (11%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVP-LEAAIVSLSVSK 275
           ++R+I  G+    L+   G +  +G+G  G     +      P  V  L+  +V      
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVA-- 363

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR------PKLIMGGLYGKRVTQVSA 329
           C E     +T  GE++ WG  ++G    GN + + R      P+ I G L G  ++ V+ 
Sbjct: 364 CGEYQTCALTDSGELFVWGENKYG----GNLVCEERTGSQWLPRQISGPLAGVSISNVAC 419

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G  H+AAV+  G L+T+G+G  G LGHG+L+S   P  V  L    V +V+CG  HT  +
Sbjct: 420 GDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAI 479

Query: 388 ----------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
                     +  G  +++ G G+ G+LGH D  K   P  +  L +    +V  G   +
Sbjct: 480 VDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLT 539

Query: 438 VALTWDGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNE 492
           VALT  G ++  G      L +      +  +V G L    + ++S G  HV AL+    
Sbjct: 540 VALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGS 599

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSA 552
           VY WG  T GQ G  N  +  + P+ V  L D  V+ I  GS  + A  +   + ++S +
Sbjct: 600 VYTWGKGTNGQLGLGNVED-RNVPTLVEALRDRQVQSIACGSNLTAAICL---HKSISVS 655

Query: 553 FTPLCVDVR-PHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFI 597
               C   R P  FT       +   C+  G  + FC   +  + I
Sbjct: 656 DQSACKGCRMPFGFT------RKKHNCYNCG--LLFCRACSSKKLI 693



 Score = 47.4 bits (111), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLS 470
           PK++E      VR +  G + +  +T  G VF WG G R        +   +P +V  L 
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
              +  V+ G+    AL+   E++ WG N  G
Sbjct: 356 GFLVKFVACGEYQTCALTDSGELFVWGENKYG 387


>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
           KNP414]
 gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
           KNP414]
          Length = 388

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 159/324 (49%), Gaps = 22/324 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N + Q+ D  +     P  +++L S I  I AG   +F + S G    +G    
Sbjct: 51  VWAWGANSNAQLGDGTKTDRYSPIPVKNLDSVI-GISAGGAASFAVRSDGTAWAWGSNLF 109

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   T  +  P +V    ++V+L   +   +H L V ++G V++WG   +G+LG G 
Sbjct: 110 GQLGDGTTYDRLTPVQVQGLHSVVAL---EAGSSHSLAVKADGSVWAWGWNTYGQLGDGT 166

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T S+  P  +        V  V+AG  HS AV  DG ++ WG    G+LG G       P
Sbjct: 167 TDSRSTPVQVQ---ALDSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVP 223

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             VT L  V +VS G + +  L  DG TVW+ G+ + G+LG E T    +P  ++     
Sbjct: 224 VQVTGLGSVVSVSAGNTFSSALKSDG-TVWAWGANDSGQLGSE-TAASNSPSPVQVTGMA 281

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
               + +G+ +S+AL  DG V+ WG      LG   ++ S   PV VT L S  +V V+ 
Sbjct: 282 SAAAISSGSDYSLALKNDGTVWAWGYNSSGQLG-NGTTTSSSAPVQVTRLGS--VVSVAA 338

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQ 503
           G  H LA+     V+ WG+NT GQ
Sbjct: 339 GPLHGLAVQSGGTVWDWGNNTYGQ 362



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 135/277 (48%), Gaps = 20/277 (7%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           AN  +     + P+EAA            H L +  +G V++WG   + +LG G T + R
Sbjct: 19  ANMAVAADRSKTPVEAA-------AGGTGHSLFLQKDGTVWAWGANSNAQLGDG-TKTDR 70

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
              + +  L    V  +SAG + S AV  DG  + WG    G+LG G    R TP  V  
Sbjct: 71  YSPIPVKNL--DSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQG 128

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
           L  V A+  G SH+L +  DG +VW+ G    G+LG   T   +TP  ++AL    V  V
Sbjct: 129 LHSVVALEAGSSHSLAVKADG-SVWAWGWNTYGQLGDGTTDSRSTPVQVQALDS--VVAV 185

Query: 431 CAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVL 485
            AG+  S+A+  DG V+ WG      L   + +  T PV VTGL S  +V VS G++   
Sbjct: 186 AAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSS 243

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           AL     V+AWG+N  GQ G +  ++    P +V G+
Sbjct: 244 ALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGM 280



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 132/267 (49%), Gaps = 17/267 (6%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           A    V S+G  ++WG    G+LG G T  +  P  + G L+   V  + AG SHS AV 
Sbjct: 90  AASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQG-LH--SVVALEAGSSHSLAVK 146

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG ++ WG   +G+LG G   SR TP  V  L  V AV+ G  H+L +  DG +VW+ G
Sbjct: 147 ADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADG-SVWAWG 205

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           +   G+LG     + T P  +  L    V  V AG +FS AL  DG V+ WG      LG
Sbjct: 206 ANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSSALKSDGTVWAWGANDSGQLG 263

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
             +++ +  +PV VTG++S   +       + LAL     V+AWG N+ GQ G +  +  
Sbjct: 264 SETAASNSPSPVQVTGMASAAAISSGS--DYSLALKNDGTVWAWGYNSSGQLG-NGTTTS 320

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
              P +V  L  V    + AG L  +A
Sbjct: 321 SSAPVQVTRLGSVV--SVAAGPLHGLA 345



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 11/224 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A   V+ WG N + Q+ D      S P ++Q+L S +  + AG   +  + + G +  +G
Sbjct: 147 ADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDS-VVAVAAGSGHSLAVKADGSVWAWG 205

Query: 245 KGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             W   LG    T   +P +V    ++VS+S      +    + S+G V++WG  + G+L
Sbjct: 206 ANWSGQLGDGTYTESTVPVQVTGLGSVVSVSAGNTFSS---ALKSDGTVWAWGANDSGQL 262

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G     S     + + G+       +S+G  +S A+  DG ++ WG    G+LG+G   S
Sbjct: 263 GSETAASNSPSPVQVTGM--ASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTS 320

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              P  VT L  V +V+ G  H L + Q G TVW  G+   G+L
Sbjct: 321 SSAPVQVTRLGSVVSVAAGPLHGLAV-QSGGTVWDWGNNTYGQL 363


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYCHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 23/289 (7%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  
Sbjct: 35  SIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIIH 88

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            L L+ DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+ 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 208 SGAVFGWGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A  VP S
Sbjct: 267 GAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLA-LVPSS 313



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LAL      +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 14/194 (7%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           + + +V+ G +HS  + EDG +YT G    G+LGH   +  + P  +  L+D  +  V+C
Sbjct: 34  RSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVAC 91

Query: 380 GESHTLVLSQDGHTV-WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           GESH+L LS  G    W  GS G LG +  ED+  V  P++I+ L +  + +V  G    
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDS--VAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL  DG  F WG      LGL     S  +P  V  L    +  V+ G +H  ALS   
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 492 EVYAWGSNTMGQCG 505
            V+ WG N  GQ G
Sbjct: 210 AVFGWGMNNAGQLG 223



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 47.8 bits (112), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  + G  +    +Q+SA
Sbjct: 330 GHTCNVKCPSPVKGH-WAAHSSQLSA 354


>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
            [Thermincola potens JR]
 gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
          Length = 4140

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 127/239 (53%), Gaps = 16/239 (6%)

Query: 279  AHVLTVTSEGEVYSWGVGEHGKLGHGN-TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             + L +  +G V++WG+ + G+LG+G   L+  +    + GL G  VT ++ G  H  A+
Sbjct: 2453 GYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTG--VTALAPGGYHVVAL 2510

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
              DG ++TWG+ D G+LG G   SR +P  V  L+ V AV+ G +HT+VL  DG TVW+ 
Sbjct: 2511 KNDGTVWTWGKNDSGQLGDGTYTSRFSPGQVPGLTGVKAVAAGANHTVVLKTDG-TVWAW 2569

Query: 398  GSGNLGKLGHEDT--GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G+   G+LG   +   K  +P  I  +    V ++ AG   ++A   DG V+ WG     
Sbjct: 2570 GNNMYGQLGTSPSVLAKTYSPVQIPGIDS--VVEIGAGIWHTLARRADGTVWAWGRNIEG 2627

Query: 451  -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             +G  S+S    +P  V+GL+   +  V+ G  H LAL     V+AWG N  GQ G  N
Sbjct: 2628 QVGNGSASAVVDSPAQVSGLTG--VTKVAAGGYHNLALRSDGTVWAWGRNDKGQLGTGN 2684



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 16/222 (7%)

Query: 327  VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGESHT 384
            V +G  +S A+  DG ++ WG  D G+LG+G  DL     P  V  L+ V A++ G  H 
Sbjct: 2448 VYSGTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTGVTALAPGGYHV 2507

Query: 385  LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            + L  DG TVW+ G  + G+LG        +P  +  L    V+ V AG + +V L  DG
Sbjct: 2508 VALKNDG-TVWTWGKNDSGQLGDGTYTSRFSPGQVPGLTG--VKAVAAGANHTVVLKTDG 2564

Query: 445  LVFWWG------LGLRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
             V+ WG      LG   S ++  ++PV + G+ S  +V++  G  H LA      V+AWG
Sbjct: 2565 TVWAWGNNMYGQLGTSPSVLAKTYSPVQIPGIDS--VVEIGAGIWHTLARRADGTVWAWG 2622

Query: 498  SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             N  GQ G  + S  VD P++V GL  V   ++ AG   ++A
Sbjct: 2623 RNIEGQVGNGSASAVVDSPAQVSGLTGVT--KVAAGGYHNLA 2662



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 17/235 (7%)

Query: 224  IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQP--LPKRVPLEAAIVSLSVSKCSE 278
            + +G   +  L   G +  +G   +G LG     + P   P++VP    + +L+      
Sbjct: 2448 VYSGTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTGVTALAPGGY-- 2505

Query: 279  AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
             HV+ + ++G V++WG  + G+LG G   S+  P  +  GL G  V  V+AG +H+  + 
Sbjct: 2506 -HVVALKNDGTVWTWGKNDSGQLGDGTYTSRFSPGQVP-GLTG--VKAVAAGANHTVVLK 2561

Query: 339  EDGLLYTWGEGDHGRLGHGD--LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
             DG ++ WG   +G+LG     L   ++P  +  +  V  +  G  HTL    DG TVW+
Sbjct: 2562 TDGTVWAWGNNMYGQLGTSPSVLAKTYSPVQIPGIDSVVEIGAGIWHTLARRADG-TVWA 2620

Query: 397  MGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
             G    G++G+     V  +P  +  L    V KV AG   ++AL  DG V+ WG
Sbjct: 2621 WGRNIEGQVGNGSASAVVDSPAQVSGLTG--VTKVAAGGYHNLALRSDGTVWAWG 2673



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 13/228 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            V+ WG N   Q+ +  +        + +P  + +  +  G +    L + G +  +GK  
Sbjct: 2464 VWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTGVTALAPGGYHVVALKNDGTVWTWGKND 2523

Query: 246  -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             G LG    T +  P +VP    +  +        H + + ++G V++WG   +G+LG  
Sbjct: 2524 SGQLGDGTYTSRFSPGQVP---GLTGVKAVAAGANHTVVLKTDGTVWAWGNNMYGQLGTS 2580

Query: 305  -NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR- 362
             + L++    + + G+    V ++ AG  H+ A   DG ++ WG    G++G+G   +  
Sbjct: 2581 PSVLAKTYSPVQIPGI--DSVVEIGAGIWHTLARRADGTVWAWGRNIEGQVGNGSASAVV 2638

Query: 363  HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
             +P  V+ L+ V  V+ G  H L L  DG TVW+ G  + G+LG  +T
Sbjct: 2639 DSPAQVSGLTGVTKVAAGGYHNLALRSDG-TVWAWGRNDKGQLGTGNT 2685



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
            V+TWG N   Q+ D        P      + ++ + AG   T +L + G +  +G    G
Sbjct: 2516 VWTWGKNDSGQLGDGTYTSRFSPGQVPGLTGVKAVAAGANHTVVLKTDGTVWAWGNNMYG 2575

Query: 250  LANTTIQPL-----PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
               T+   L     P ++P   ++V +        H L   ++G V++WG    G++G+G
Sbjct: 2576 QLGTSPSVLAKTYSPVQIPGIDSVVEIGAGIW---HTLARRADGTVWAWGRNIEGQVGNG 2632

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            +  +       + GL G  VT+V+AG  H+ A+  DG ++ WG  D G+LG G+  S + 
Sbjct: 2633 SASAVVDSPAQVSGLTG--VTKVAAGGYHNLALRSDGTVWAWGRNDKGQLGTGNTVSSNV 2690

Query: 365  P 365
            P
Sbjct: 2691 P 2691



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 325  TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSD------VGAV 377
            T ++AG  HS AV  D  L  WG  D G+LG G   +    P LV           +  +
Sbjct: 1951 TDIAAGTDHSMAVRGDSALVGWGANDDGQLGDGHFGEPVPYPVLVRNADGTPWNPVLSGM 2010

Query: 378  SCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
            S G +HT VL  DG +VWS G+   G+LG+
Sbjct: 2011 SPGSTHTAVLGSDG-SVWSWGNNAFGQLGN 2039



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 12/117 (10%)

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH-TPVLVTGLSSHQIVDV 477
            F    V +GT +S+AL  DG V+ WG      LG     ++ H  P  V GL+   +  +
Sbjct: 2443 FTAAAVYSGTGYSLALKPDGTVWAWGINDQGQLGNGGQDLNPHKNPEQVPGLTG--VTAL 2500

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
            + G  HV+AL     V+ WG N  GQ G   +++    P +V GL    V+ + AG+
Sbjct: 2501 APGGYHVVALKNDGTVWTWGKNDSGQLGDGTYTSRF-SPGQVPGL--TGVKAVAAGA 2554



 Score = 44.7 bits (104), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM-----GGLYGKRVTQVSAGHSHS 334
            H + V  +  +  WG  + G+LG G+   +  P  ++     G  +   ++ +S G +H+
Sbjct: 1959 HSMAVRGDSALVGWGANDDGQLGDGH-FGEPVPYPVLVRNADGTPWNPVLSGMSPGSTHT 2017

Query: 335  AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            A +  DG +++WG    G+LG+G   +   P
Sbjct: 2018 AVLGSDGSVWSWGNNAFGQLGNGSYATAGPP 2048


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 141/275 (51%), Gaps = 16/275 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E H + V  +G+++S+G+ ++G+LGH  + ++  P   + GL    +TQV+ G  H+ 
Sbjct: 41  CGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP---VDGLEAHNITQVACGAQHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELS--DVGAVSCGESHTLVLSQDGH 392
           A  E G ++ WG   +G+LG    +S   TP +V  L+   V  ++CG SH++ L+  G 
Sbjct: 98  AQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGE 157

Query: 393 TVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            ++  GS + G+LG   +G   T P +++ L+   +  +  G  FS A+T  G V+ WG 
Sbjct: 158 -IYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGK 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL  ++     P  +  L   ++  +  G  H  AL++   V+ +G+   GQ G
Sbjct: 217 NSFGQLGLGDTT-DRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
               +N +  P KV+ L    V QIC G   ++A+
Sbjct: 276 HCTSANEM-LPRKVLELMGTTVTQICCGRCHTLAF 309



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 27/318 (8%)

Query: 181 TDISVAHSKVYTWGCNLHHQILDEVRGKC-SRPRLQSLPS----NIRHIEAGQFCTFLLD 235
           T + +   K++++G N + Q+     G C SR R + +      NI  +  G   T   +
Sbjct: 46  TILVMKDGKLFSFGLNDYGQL-----GHCRSRTRAEPVDGLEAHNITQVACGAQHTLAQN 100

Query: 236 STGGLLVYG---KGWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
             G +  +G    G LGL    ++ P PK V   A    + ++ C  +H + +T+ GE+Y
Sbjct: 101 EWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIA-CGRSHSMALTNVGEIY 159

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            WG   HG+LG G++ +      ++  L G  ++ +S G   S AVT  G +Y WG+   
Sbjct: 160 CWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSF 219

Query: 352 GRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           G+LG GD   R  PT +  L    V  + CG  HT  L++DG  V++ G+G  G+LGH  
Sbjct: 220 GQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDG-GVFTFGAGMYGQLGHCT 278

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRS-----SSISFHTP 463
           +     P+ +  L    V ++C G   ++A     G ++ +GLG        S+ + ++P
Sbjct: 279 SANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSP 338

Query: 464 VLVTG---LSSHQIVDVS 478
            LV G    S++ I DV 
Sbjct: 339 QLVIGPWETSNNSIKDVK 356



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 11/208 (5%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           + QV  G +H+  V +DG L+++G  D+G+LGH   ++R  P    E  ++  V+CG  H
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGLEAHNITQVACGAQH 95

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           TL  ++ G  V++ GS + G+LG + +   + TPK++++L   +V ++  G S S+ALT 
Sbjct: 96  TLAQNEWGE-VFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTN 154

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G ++ WG      LGL SS      P LV  L    I  +S G     A++    VY W
Sbjct: 155 VGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGW 214

Query: 497 GSNTMGQCG-QDNFSNPVDQPSKVVGLE 523
           G N+ GQ G  D    P  QP+++  L 
Sbjct: 215 GKNSFGQLGLGDTTDRP--QPTQLKSLR 240



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 11/186 (5%)

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R +P   T + D+  V CGE+HT+++ +DG  ++S G  + G+LGH  +     P  ++ 
Sbjct: 26  RASP--FTLVDDIVQVGCGENHTILVMKDG-KLFSFGLNDYGQLGHCRSRTRAEP--VDG 80

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    + +V  G   ++A    G VF WG      LGL        TP +V  L++ Q+V
Sbjct: 81  LEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVV 140

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            ++ G SH +AL+   E+Y WGSN+ GQ G  +   P  +P  V  L+ + +  I  G+ 
Sbjct: 141 QIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGAD 200

Query: 536 FSIAYT 541
           FS A T
Sbjct: 201 FSFAVT 206


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 23/289 (7%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  
Sbjct: 35  SIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIIH 88

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            L L+ DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+ 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 208 SGAVFGWGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A  VP S
Sbjct: 267 GAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLA-LVPSS 313



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 201 ILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           I   ++G  + P++    S+  I+ +  G   +  L   G +   G   KG LG      
Sbjct: 14  ISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN 73

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKL 314
           +P       +  I+ ++   C E+H L ++  G+++SWG G  G+LG   T  S   P+L
Sbjct: 74  KPEQIGALADQHIIHVA---CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSD 373
           I   L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  
Sbjct: 131 IQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEG 189

Query: 374 V--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           +    V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  + 
Sbjct: 190 IPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYIS 248

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLA 486
            G   +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLA 308

Query: 487 L-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           L      +YA+G    GQ G  +  N V  PS V G
Sbjct: 309 LVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPVKG 343



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 47.8 bits (112), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  + G  +    +Q+SA
Sbjct: 330 GHTCNVKCPSPVKGH-WAAHSSQLSA 354


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 175/366 (47%), Gaps = 30/366 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQ-----SLPSNIRHIEAGQFCTFLLDSTGGL 240
           A    ++WG N+  Q+ D       +PR+       L        +GQ  T +L + G L
Sbjct: 365 ADGTAWSWGDNVFGQLGD----TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRL 420

Query: 241 LVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
             +G    G L N T Q     +PL   +  ++       H   +  +G V+SWG  ++G
Sbjct: 421 WAWGDNNQGQLGNGTQQN--SSLPLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYG 478

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG G T + R   + + GL G  VT ++ G  HS A+  +G ++ WG   +G+LG G  
Sbjct: 479 QLGDG-TRTDRSTPVQVPGLTG--VTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTT 535

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             R  P  V+ L+++ +++ G  H+L L  DG TVW+ G    G+LG+        P  +
Sbjct: 536 VDRTQPVQVSGLTNIVSIAAGGGHSLALRSDG-TVWAFGYNFDGQLGNGTRTWTILP--V 592

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
           +A+    V  + AG  +S+AL  DG V+ WG      LG+ ++  S   P+ V+GLS+  
Sbjct: 593 QAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGS-AVPLQVSGLSA-- 649

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           I  ++ G  H LAL     V+AWG N  GQ G     N +  P  VV + +     I AG
Sbjct: 650 ITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRL-TPGLVVSMSNATA--IFAG 706

Query: 534 SLFSIA 539
            L S+A
Sbjct: 707 DLHSLA 712



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 166/361 (45%), Gaps = 25/361 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
             V+ WG N + Q+        + P    +   +  + AG   +  L + G    +G   
Sbjct: 318 GAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLV-AGFRHSVALGADGTAWSWGDNV 376

Query: 248 LG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            G L +TT QP    V +    +  + +   + H + + + G +++WG    G+LG+G  
Sbjct: 377 FGQLGDTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQ 436

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            +   P  +   L G  +T VS+GH H+AA+  DG +++WG   +G+LG G    R TP 
Sbjct: 437 QNSSLPLPVN--LTG--ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPV 492

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L+ V +++ G+ H+L L  +G TVW  G    G+LG   T   T P  +  L    
Sbjct: 493 QVPGLTGVTSIATGDYHSLALRSNG-TVWGWGFNRYGQLGDGTTVDRTQPVQVSGLTN-- 549

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVDVS 478
           +  + AG   S+AL  DG V+ +G         G R+ +I    PV   GL +  +V ++
Sbjct: 550 IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTI---LPVQAVGLGN--VVSLA 604

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G  + LAL     V+AWG N  GQ G          P +V GL    +  I AG+  S+
Sbjct: 605 AGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSA-VPLQVSGLS--AITSITAGTYHSL 661

Query: 539 A 539
           A
Sbjct: 662 A 662



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 155/349 (44%), Gaps = 30/349 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           +   V+ WG N   Q+ D      + P   +  ++   + AG   +  LD  G +  +G 
Sbjct: 67  SEGTVFAWGFNRLGQLGDGTTQDKAAPVQVAGVASAVSVAAGDQYSLALDENGDVWAWGD 126

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG    T +  P+RV      VSL+      AH + + ++G V++WG     +LG
Sbjct: 127 NASGQLGDGTLTPRAQPRRVSGLTQGVSLA---SGFAHAVALRADGTVWAWGDNRSNQLG 183

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              TL++    + + GL    +  V AG S S A+  DG ++ WG+  +G+LG G    R
Sbjct: 184 S-ATLTRSPVPIPVPGL--SDIVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRR 240

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  V  L  V  +S G  H L L  DG T W+ G    G+LG   T + T P +I   
Sbjct: 241 AAPVRVANLDAVTHISAGAYHALALRADG-TAWAWGYNAFGQLGDGTTVQRTLPVLIGLT 299

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LG---LRSSSISFHTPVLVTGLSSHQ 473
                R V AG   S+A+  DG V+ WG      LG   L SS++  H      G++   
Sbjct: 300 ---ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLH-----AGMTGG- 350

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            V +  G  H +AL      ++WG N  GQ G   F  P   P +V GL
Sbjct: 351 -VTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTF-QPRMAPVQVTGL 397



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 26/331 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN---IRHIEAGQFCTFLLDSTGGLLV 242
           A+ +++ WG N   Q+ +  +   S P    LP N   I  + +G   T  L   G +  
Sbjct: 416 ANGRLWAWGDNNQGQLGNGTQQNSSLP----LPVNLTGITSVSSGHRHTAALRLDGTVWS 471

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G    G LG    T +  P +VP    + S++     + H L + S G V+ WG   +G
Sbjct: 472 WGTNQYGQLGDGTRTDRSTPVQVPGLTGVTSIA---TGDYHSLALRSNGTVWGWGFNRYG 528

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG G T+ + +P  + G L    +  ++AG  HS A+  DG ++ +G    G+LG+G  
Sbjct: 529 QLGDGTTVDRTQPVQVSG-L--TNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTR 585

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
                P     L +V +++ G+ ++L L  DG TVW+ G    G+LG   T     P  +
Sbjct: 586 TWTILPVQAVGLGNVVSLAAGKMYSLALRADG-TVWAWGYNASGQLGVGTTQGSAVPLQV 644

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQI 474
             L    +  + AGT  S+AL  DG V+ WG          +S +  TP LV  +S+   
Sbjct: 645 SGLSA--ITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSMSN--A 700

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             +  GD H LA+     ++AWG N+ GQ G
Sbjct: 701 TAIFAGDLHSLAVRADGTLWAWGLNSHGQLG 731



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 121/240 (50%), Gaps = 10/240 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++  V+ WG N + Q+ D      ++P   S  +NI  I AG   +  L S G +  +G 
Sbjct: 515 SNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLTNIVSIAAGGGHSLALRSDGTVWAFGY 574

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG    T   LP +      +VSL+  K    + L + ++G V++WG    G+LG
Sbjct: 575 NFDGQLGNGTRTWTILPVQAVGLGNVVSLAAGKM---YSLALRADGTVWAWGYNASGQLG 631

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T     P L + GL    +T ++AG  HS A+  DG ++ WG    G+LG+G   +R
Sbjct: 632 VGTTQGSAVP-LQVSGL--SAITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNR 688

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            TP LV  +S+  A+  G+ H+L +  DG T+W+ G  + G+LG  DT +   P  ++ L
Sbjct: 689 LTPGLVVSMSNATAIFAGDLHSLAVRADG-TLWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 17/298 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + S+G V+S G    G+LG      + +PK I   L   RV  VS G  HS AV
Sbjct: 43  ERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQ-ALETLRVELVSCGKEHSLAV 101

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K  +  P  +  L+ +    VSCG  H+L LS+DG  V
Sbjct: 102 CYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQ-V 160

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S GS + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 161 FSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNN 220

Query: 451 ---LGLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              L    S++   +  P  V+ L +  +V +S G  H   L+Q  +V+ +G N+ GQ G
Sbjct: 221 AGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLG 280

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
               +     P  + G+E + V QI  GS  ++AY V  +   +S    P C     H
Sbjct: 281 HSPTAEKTG-PQLMEGIEGL-VSQIDCGSYHTLAY-VYTTGQVVSFGRGPSCKSCSNH 335



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 157/325 (48%), Gaps = 33/325 (10%)

Query: 199 HQILDEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG---K 245
           H   D  RG+  R  LQ    P  I+ +E         G+  +  +   G +  +G   +
Sbjct: 56  HSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSE 115

Query: 246 GWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G LG+     I  +P+++     I  + VS C   H L ++ +G+V+SWG   HG+LG G
Sbjct: 116 GQLGIGEFKEINLIPQKIKTLTGIKIIQVS-CGNYHSLALSEDGQVFSWGSNSHGQLGLG 174

Query: 305 NTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---GHGDLK 360
             L SQ  P+ +   L G  + QV+AG +HS A++  G  + WG  + G+L   G     
Sbjct: 175 KELPSQASPQRVR-SLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPV 233

Query: 361 SRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             + P  V+ L  +G V  SCG  HT VL+Q+G  V++ G  + G+LGH  T + T P++
Sbjct: 234 QSYKPRSVSALKTLGVVYISCGHEHTAVLTQNG-KVFTFGDNSCGQLGHSPTAEKTGPQL 292

Query: 419 IEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG------LSS 471
           +E +    V ++  G+  ++A  +  G V  +G G    S S H  +L         +S+
Sbjct: 293 MEGIEGL-VSQIDCGSYHTLAYVYTTGQVVSFGRGPSCKSCSNHPELLTENTDVTCLISA 351

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAW 496
            ++VDV +   H+ A +  N V  +
Sbjct: 352 ERLVDVQV--KHIFAGTHANFVTTY 374



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 12/227 (5%)

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
           G  G  + Q ++G  HS  +  DG +++ G+   G+LG   L+    P  +  L    V 
Sbjct: 30  GPGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVE 89

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGT 434
            VSCG+ H+L +   G  V++ G+G+ G+LG  +  ++   P+ I+ L   ++ +V  G 
Sbjct: 90  LVSCGKEHSLAVCYKGR-VFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGN 148

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             S+AL+ DG VF WG      LGL     S  +P  V  L    +  V+ G +H  ALS
Sbjct: 149 YHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALS 208

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAG 533
                + WGSN  GQ      + PV   +P  V  L+ + V  I  G
Sbjct: 209 LSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCG 255



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 16/217 (7%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  DG  V S G  + G+LG     +   PK I+AL   RV  V  G   
Sbjct: 39  AASGERHSLLLLSDG-AVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEH 97

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+A+ + G VF WG      LG+         P  +  L+  +I+ VS G+ H LALS+ 
Sbjct: 98  SLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSED 157

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP------P 544
            +V++WGSN+ GQ G          P +V  L+ + + Q+ AG   S A ++        
Sbjct: 158 GQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWG 217

Query: 545 SNSALSSAFTPLCVDV---RPHTFTLIREFLEQYSAC 578
           SN+A   AF    V V   +P + + ++     Y +C
Sbjct: 218 SNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISC 254



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 17/202 (8%)

Query: 189 KVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V++WG N H Q  +  E+  + S  R++SL    +  + AG   +F L  +G    +G 
Sbjct: 159 QVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGS 218

Query: 246 ---GWLGL--ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              G L    +N  +Q    R       + +    C   H   +T  G+V+++G    G+
Sbjct: 219 NNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQ 278

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDL 359
           LGH  T  +  P+L M G+ G  V+Q+  G  H+ A V   G + ++G G   +      
Sbjct: 279 LGHSPTAEKTGPQL-MEGIEG-LVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCK------ 330

Query: 360 KSRHTPTLVTELSDVGAVSCGE 381
              + P L+TE +DV  +   E
Sbjct: 331 SCSNHPELLTENTDVTCLISAE 352


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  124 bits (311), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 10/250 (4%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  ++ L+        +++  S   V SWG GE G+LGHG+   ++ P+ +   L+ +  
Sbjct: 6   EPEVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLH-RGA 64

Query: 325 TQVSAGHSHSAAVT-EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE 381
           T V  G  +S AV   D  +Y+WG GD GRLG GD+K    P  +  L+   V +V+CG+
Sbjct: 65  TSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGD 124

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           +HTLV + +G  +++ G    G+ G         P+++ AL+   V  V  G   S+ +T
Sbjct: 125 THTLVATAEGQ-LFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVT 183

Query: 442 WDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            +G V+ WG G   +     S   H P L  GL   ++  V+ G  H +A+ +   +Y W
Sbjct: 184 SEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTW 243

Query: 497 GSNTMGQCGQ 506
           G     Q  Q
Sbjct: 244 GWGAYAQLMQ 253



 Score =  123 bits (309), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 32/330 (9%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           VY  GW     LG  +     +P  +P  A     SV+ C + H L  T+EG+++++G  
Sbjct: 84  VYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVA-CGDTHTLVATAEGQLFAFGRN 142

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           ++G+ G G+      P+L+   L GK V  V+ G  HS  VT +G +Y WG G +G +G 
Sbjct: 143 QNGQCGLGSIQDCLEPQLVTA-LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGD 201

Query: 357 GDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           G+ + RH PTL   L    V  V+CG  H++ + + G  +++ G G   +L   D     
Sbjct: 202 GESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGG-AMYTWGWGAYAQLMQGDRKDHY 260

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGLRSSSISFHTPVL----VT 467
            PK +EA+++  V  V  G   ++A    G +F   W   G     +  +  V+    V 
Sbjct: 261 VPKRVEAVQQ--VATVAGGWRHTMAADSQGRLFASGWNKFG--QCGVGHNEDVVRVQQVE 316

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE---- 523
            L+  ++V V  G  H +A++   + ++WG N  GQ G     +  + P ++  L     
Sbjct: 317 ALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDS-NSPVELAALSRGGI 375

Query: 524 --DVCVRQICAGSLFSIA----YTVPPSNS 547
             D   RQ     L+ +A    Y V P ++
Sbjct: 376 NTDALTRQAQPVVLYGVAPSDRYAVVPDSA 405



 Score =  119 bits (297), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 84/269 (31%), Positives = 126/269 (46%), Gaps = 12/269 (4%)

Query: 189 KVYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +VY+WG     ++    + +V   C  P L      +  +  G   T +  + G L  +G
Sbjct: 83  QVYSWGWGDFGRLGTGDVKDVFIPCPLPALAG--RRVASVACGDTHTLVATAEGQLFAFG 140

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G  GL +      P+ V        ++V+ C   H + VTSEGEVY WG G +G +
Sbjct: 141 RNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVA-CGAEHSMCVTSEGEVYCWGWGRYGNI 199

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G +  +  P L   GL G +V QV+ G  HS AV E G +YTWG G + +L  GD K 
Sbjct: 200 GDGESQDRHLPTL-AKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKD 258

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            + P  V  +  V  V+ G  HT+     G  +++ G    G+ G      V   + +EA
Sbjct: 259 HYVPKRVEAVQQVATVAGGWRHTMAADSQGR-LFASGWNKFGQCGVGHNEDVVRVQQVEA 317

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           L   RV +V +G   ++A+T  G  F WG
Sbjct: 318 LAGERVVQVKSGWKHTMAVTHTGKFFSWG 346



 Score = 67.4 bits (163), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 15/198 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQF-C----TFLLDSTGGL 240
           +  +VY WG   +  I D   G+     L +L   +  ++  Q  C    +  +D  G +
Sbjct: 184 SEGEVYCWGWGRYGNIGD---GESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240

Query: 241 LVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G G    L   +     +PKRV    A+  ++       H +   S+G +++ G  +
Sbjct: 241 YTWGWGAYAQLMQGDRKDHYVPKRV---EAVQQVATVAGGWRHTMAADSQGRLFASGWNK 297

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G+ G G+     R + +   L G+RV QV +G  H+ AVT  G  ++WG   +G+LGH 
Sbjct: 298 FGQCGVGHNEDVVRVQQVEA-LAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHS 356

Query: 358 DLKSRHTPTLVTELSDVG 375
            ++  ++P  +  LS  G
Sbjct: 357 GMQDSNSPVELAALSRGG 374


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 166/330 (50%), Gaps = 27/330 (8%)

Query: 234 LDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGE 289
           LDS   +L +G   LG    +T +Q +     +   I   SV +  C   H + +  +GE
Sbjct: 74  LDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGE 133

Query: 290 VYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           VY+ G+   G+LGH   GN   Q      +G L  + +  V+ G SHS A+++ G L++W
Sbjct: 134 VYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGESHSLALSDRGQLFSW 187

Query: 347 GEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           G G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG   ++ G  + G
Sbjct: 188 GAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ-FFTWGKNSHG 246

Query: 404 KLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           +LG  ++     +P+ + +L    + +V AG + S AL+  G VF WG      LGL S 
Sbjct: 247 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGL-SD 305

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G D+ ++ V+ P
Sbjct: 306 EEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN-P 364

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            +V+ L    V QI  G   ++A+ VP S 
Sbjct: 365 RRVLELMGSEVTQIACGRQHTLAF-VPSSG 393



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 170 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 228

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 229 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 288

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 289 -AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 347

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 348 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 407

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 408 TGHTCN-VKCPSPVKG 422



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 199 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 258

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 259 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL 318

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 319 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 376

Query: 326 QVSAGHSHSAA-VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 377 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 420



 Score = 45.8 bits (107), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 349

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 350 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 408

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 409 GHTCNVKCPSPVKG 422


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 138/265 (52%), Gaps = 17/265 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +Y WG   HG+LG G    ++   P+  M       V Q + G SH+  +T+DG LYT G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPRE-MDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 348 EGDHGRLGH--GDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
             DHG+LGH   +L ++  P  ++ L +  V  VSCG SH+L L+  G  ++S GS   G
Sbjct: 62  NNDHGQLGHDTNNLPNKR-PQFISALENYIVTQVSCGLSHSLALTNWGQ-LFSWGSNATG 119

Query: 404 KLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           +LGH+ D      P++I+++    V ++  G S  +ALT  G +F WG      LGL ++
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                T  LV  L+   I  ++ G +H  A+S+   ++ WG NT GQ G ++  +    P
Sbjct: 180 GKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC-YP 238

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           +++  L  + VR I  G  FS+  T
Sbjct: 239 TQLKTLRSLGVRYISCGDDFSVFLT 263



 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 140/278 (50%), Gaps = 15/278 (5%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           + C  +H L +T +G++Y+ G  +HG+LGH  N L  +RP+ I   L    VTQVS G S
Sbjct: 41  AACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFI-SALENYIVTQVSCGLS 99

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQ 389
           HS A+T  G L++WG    G+LGH  D+ S   P ++  ++   V  +SCG SH L L+ 
Sbjct: 100 HSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTN 159

Query: 390 DGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            G  +++ G+   G+LG   TG KV T  ++++L    +  +  G + S A++  G +F 
Sbjct: 160 SGE-LFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFG 218

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL       + P  +  L S  +  +S GD   + L+Q   V+  G  T G
Sbjct: 219 WGKNTFGQLGLNDLDSRCY-PTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFG 277

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           Q G     N +  P  V  L    + QI  G   ++A+
Sbjct: 278 QLGHGTHGNEI-LPRMVFELMGSKITQIACGRKHTLAF 314



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 17/295 (5%)

Query: 189 KVYTWGCNLHHQILDEVRG-KCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGK 245
           K+YT G N H Q+  +       RP+  S   N  +  +  G   +  L + G L  +G 
Sbjct: 56  KLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGS 115

Query: 246 GWLGLANTTIQ----PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G     +     P P+ +   A    + +S C  +H L +T+ GE+++WG  E+G+L
Sbjct: 116 NATGQLGHDLDMVSYPAPRMIKSIATKTVVQIS-CGHSHCLALTNSGELFAWGANEYGQL 174

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +     ++  L G  +  ++ G +HS AV++ G ++ WG+   G+LG  DL S
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDS 234

Query: 362 RHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R  PT +  L  +G   +SCG+  ++ L+Q+G  V++ G G  G+LGH   G    P+++
Sbjct: 235 RCYPTQLKTLRSLGVRYISCGDDFSVFLTQEG-GVFTCGLGTFGQLGHGTHGNEILPRMV 293

Query: 420 EALRKFRVRKVCAGTSFSVAL------TWDGLVFWWGLGLRSSSISFHTPVLVTG 468
             L   ++ ++  G   ++A        +   +   G     SS+SF+TP +V G
Sbjct: 294 FELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVRG 348


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 25/297 (8%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  
Sbjct: 35  SIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIIH 88

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            L L+ DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+ 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 208 SGAVFGWGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF 553
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A  VP  +S L  AF
Sbjct: 267 GAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLAL-VP--SSGLIYAF 319



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 201 ILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           I   ++G  + P++    S+  I+ +  G   +  L   G +   G   KG LG      
Sbjct: 14  ISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN 73

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKL 314
           +P       +  I+ ++   C E+H L ++  G+++SWG G  G+LG   T  S   P+L
Sbjct: 74  KPEQIGALADQHIIHVA---CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSD 373
           I   L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  
Sbjct: 131 IQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEG 189

Query: 374 V--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           +    V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  + 
Sbjct: 190 IPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYIS 248

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLA 486
            G   +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLA 308

Query: 487 L-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           L      +YA+G    GQ G  +  N V  PS V G
Sbjct: 309 LVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPVKG 343



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 47.8 bits (112), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  + G  +    +Q+SA
Sbjct: 330 GHTCNVKCPSPVKGH-WAAHSSQLSA 354


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 160/333 (48%), Gaps = 27/333 (8%)

Query: 192 TWGCNLHHQILDEVRGKCSRPR-LQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           T+G NL  Q+         RP  +++L    I ++ AG  CT  +   G +  +G G   
Sbjct: 62  TFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYG 121

Query: 247 WLGLANTTIQPLPKRVPLEAA--IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            LG  + + + LP+ V       IV +S+      H+  +  +G +Y WG       G G
Sbjct: 122 KLGHNDDSNENLPRLVEALKGKNIVKVSIGG---NHMAAIDKDGHLYCWG--RAASAGSG 176

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T     P+LI G L  ++V  VS G SH+AAVTE G ++TWG G  G LGHG+  S++ 
Sbjct: 177 GTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQ 236

Query: 365 PTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGK--VTTPKVIE 420
           P  V  L++ V  V+CG   T+ + + G  ++S G+ + G+LG     G+  V TP+ + 
Sbjct: 237 PKKVQSLTEKVVDVACGRDFTIFVCESG--LYSCGADDYGQLGLGRSHGERFVQTPRSLS 294

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQ 473
                 V  + AG     AL  DGLV+ WGLG          +  S   P  V  L + +
Sbjct: 295 GTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKP--VDNLRNFE 352

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           IV V+ G  H  A+++   +Y WG    GQ G+
Sbjct: 353 IVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGR 385



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 9/210 (4%)

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           AA+    LL T+G    G+LG G  +    P  V  LS   +  V+ G+S T  +S DG 
Sbjct: 52  AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDG- 110

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V++ GSG  GKLGH D      P+++EAL+   + KV  G +   A+  DG ++ WG  
Sbjct: 111 DVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRA 170

Query: 453 LRSSSIS---FHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             + S        P L+ G L   +++ VS G SH  A+++  EV+ WG+   G+ G   
Sbjct: 171 ASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGE 230

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
             N   QP KV  L +  V   C G  F+I
Sbjct: 231 -KNSQYQPKKVQSLTEKVVDVAC-GRDFTI 258


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 151/320 (47%), Gaps = 22/320 (6%)

Query: 240 LLVYGKGWLGLANTTIQPLPKRVPLEAAIVS---LSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +L +G    G     ++  P   P    + S   L    C   H + +  +G VY+ G  
Sbjct: 1   MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
             G+LGH    +   P+++ G L  +++T VS G  HS AV E G L+ WG GD G+LG 
Sbjct: 61  SCGQLGHDK--AGISPEVV-GALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGL 117

Query: 357 GDLKSR-HTPTLVTELSD--VGAVSCGESHTLVLSQDGHT-VWSMG-SGNLGKLGHEDTG 411
           G  ++    P LV  L D  +  V CG  H + LS+DG    W    SG LG LG  +  
Sbjct: 118 GTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLG-LGKGEPS 176

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
           K+  P  +++L    + ++ AG   S AL+  G VF WG      LGL         P  
Sbjct: 177 KL-FPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQ-DRAVPCH 234

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           +  L S ++V +S GD H  AL++   ++ +G  + GQ G  + +N    P +V+ L   
Sbjct: 235 IKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGS-TNSELLPRRVLELMGT 293

Query: 526 CVRQICAGSLFSIAYTVPPS 545
            V QI  G   ++A+ VP S
Sbjct: 294 EVSQIACGRHHTLAF-VPSS 312



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 10/244 (4%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +++  C   H + V  +G++++WG G+ G+LG G T +  R   ++  L   R++QV  G
Sbjct: 85  ITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCG 144

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDV--GAVSCGESHTLVL 387
           + H  A++ DG L+TWG+   G+LG G  + S+  P  +  L+ +    ++ G  H+  L
Sbjct: 145 NQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFAL 204

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           S  G  V+  G    G+LG  D      P  I+ LR  +V  +  G   + ALT DG +F
Sbjct: 205 SLSG-AVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLF 263

Query: 448 W-----WGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTM 501
                 WG     S+ S   P  V  L   ++  ++ G  H LA       VYA+G N+ 
Sbjct: 264 TFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSH 323

Query: 502 GQCG 505
           GQ G
Sbjct: 324 GQLG 327



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 119/283 (42%), Gaps = 12/283 (4%)

Query: 145 TLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQI 201
           T   ++   LG  K+  S   + +  T K+T        S+A     +++ WG     Q+
Sbjct: 56  TCGSNSCGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQL 115

Query: 202 -LDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTI 255
            L         PRL  +     I  +  G      L   G L  +G+   G LGL     
Sbjct: 116 GLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEP 175

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
             L        A + L+       H   ++  G V+ WG    G+LG  +   +  P  I
Sbjct: 176 SKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHI 235

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SD 373
              L  ++V  +S G  H+AA+T+DG L+T+G+G  G+LGHG   S   P  V EL  ++
Sbjct: 236 KF-LRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTE 294

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           V  ++CG  HTL        V++ G  + G+LG    G   +P
Sbjct: 295 VSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSP 337


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 23/289 (7%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  
Sbjct: 35  SIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIIH 88

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            L L+ DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+ 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 208 SGAVFGWGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A  VP S
Sbjct: 267 GAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLAL-VPSS 313



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 125/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LAL      +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 14/194 (7%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
           + + +V+ G +HS  + EDG +YT G    G+LGH   +  + P  +  L+D  +  V+C
Sbjct: 34  RSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHE--REGNKPEQIGALADQHIIHVAC 91

Query: 380 GESHTLVLSQDGHTV-WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           GESH+L LS  G    W  GS G LG +  ED+  V  P++I+ L +  + +V  G    
Sbjct: 92  GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDS--VAVPRLIQKLNQQTILQVSCGNWHC 149

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL  DG  F WG      LGL     S  +P  V  L    +  V+ G +H  ALS   
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 492 EVYAWGSNTMGQCG 505
            V+ WG N  GQ G
Sbjct: 210 AVFGWGMNNAGQLG 223



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 47.8 bits (112), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  + G  +    +Q+SA
Sbjct: 330 GHTCNVKCPSPVKGH-WAAHSSQLSA 354


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 158/316 (50%), Gaps = 20/316 (6%)

Query: 245 KGWLGLANTTIQP-LPKRVPLE-AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           KG LG    T    LP RV  + A    ++   C   H   +TS+G+V  +G G  G+LG
Sbjct: 18  KGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLG 77

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG--HGDLK 360
            GNT S   P+ +   L GK V +++AG  HS A+TE G LY +G+   G+LG  H    
Sbjct: 78  IGNTDSHSNPQRVHL-LSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTA 136

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGS---GNLGKLGHEDTGK--- 412
              TP  V  L  + +  ++CG+ HT VL+  G  ++  G+   G LG  GH + G    
Sbjct: 137 KEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGE-LFMFGNNRDGALGVAGHANEGPPIV 195

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVT 467
            + P+++  L+   V ++  G   +VALT  G V+ WG   R       + + +TP LV 
Sbjct: 196 ASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVC 255

Query: 468 G-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             LS+ + + V+ G  H +A++  ++VY +GS+  GQ G       V  P+++V L    
Sbjct: 256 KPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIVRLGGRR 315

Query: 527 VRQICAGSLFSIAYTV 542
           V+    G+  +I  TV
Sbjct: 316 VKNCVGGAWHTIIGTV 331



 Score = 97.4 bits (241), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 116/239 (48%), Gaps = 22/239 (9%)

Query: 293 WGVG--EHGKLGHGN-TLSQRRPKLIMGGLY-GKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           W VG    G+LG+G  T S   P  +   L   +R+ +V  G+ H+ A+T DG +  +G 
Sbjct: 11  WAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGN 70

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMG---SGNLG 403
           G  G+LG G+  S   P  V  LS  G V  + G  H+L L++ G  +++ G   SG LG
Sbjct: 71  GVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGD-LYAFGDNLSGQLG 129

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LGH  T K  TP+ +  L + ++ ++  G   +  LT  G +F +G      LG+   +
Sbjct: 130 -LGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHA 188

Query: 458 -----ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
                I    P LVTGL    +V +  G  H +AL+    VY WG N  GQ G  +  N
Sbjct: 189 NEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGDTQN 247



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +Y +G NL  Q+             Q +P    + I  +  GQ  T +L S+G L ++G 
Sbjct: 117 LYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGN 176

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVS-----KCSEAHVLTVTSEGEVYSWGVGE 297
              G LG+A    +  P        +  L         C   H + +T+ G VY WG   
Sbjct: 177 NRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENG 236

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G+LG G+T ++  P L+   L   +   V+ G  H+ AVT+   +Y +G   HG+LG G
Sbjct: 237 RGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLG 296


>gi|403350318|gb|EJY74616.1| hypothetical protein OXYTRI_04126 [Oxytricha trifallax]
 gi|403370253|gb|EJY84990.1| hypothetical protein OXYTRI_17158 [Oxytricha trifallax]
          Length = 1116

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 42/326 (12%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN-TLSQRRPK--- 313
           +PK    +  I  ++   C E H   +T +G VYS G  +  KLG  N    Q  PK   
Sbjct: 62  IPKSCTFQTKIKEVA---CGEDHSCLLTLQGHVYSMGSNQFNKLGVKNLNTFQTSPKNGF 118

Query: 314 ------LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT--- 364
                  ++  L    V  +S G +H+A V+ DGL +TWG+ ++G+LG G + S+     
Sbjct: 119 EYSNTPKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQLGLGKISSQQRRNE 178

Query: 365 ---------PTLVTELSD----VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL--GHED 409
                    P++V         +  V+CG  HTL LS++G  V+SMG  + G+L  G +D
Sbjct: 179 SSVFQQGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQ-VYSMGDNSFGQLGIGMQD 237

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
                 P  + +L    + K+ +G   S AL+  G +F+WG G+     SF+ P    G+
Sbjct: 238 IQYKDIPTRVPSLS--NITKISSG-HHSAALSSSGQLFFWGTGVFG---SFYEP---KGV 288

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
               I+DVS+G     AL +   ++ WGSN+ G+ G  +F  P   P  V  L++  V +
Sbjct: 289 IDSDIIDVSVGGCFGAALDRDGLIWTWGSNSKGELGVGDFE-PRPYPYPVTYLKNKKVNK 347

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTP 555
           +  G  F++A         LS+A  P
Sbjct: 348 VACGGSFALAIGNSKDKDNLSNASNP 373



 Score = 84.0 bits (206), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 72/272 (26%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           E+Y WG  E+G+LG G+  +Q   +     L  K  + +SA +  +  +           
Sbjct: 14  EIYVWGNDEYGQLGLGHRYNQTSKQ--EQDLQNKNHSIISASYDETRKL----------- 60

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
                         + P   T  + +  V+CGE H+ +L+  GH V+SMGS    KLG +
Sbjct: 61  --------------NIPKSCTFQTKIKEVACGEDHSCLLTLQGH-VYSMGSNQFNKLGVK 105

Query: 409 DTGKV-----------TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           +                TPK++E L  + V  +  G + +  ++ DGL F WG      L
Sbjct: 106 NLNTFQTSPKNGFEYSNTPKLVELLVNYEVISISCGWNHTACVSIDGLSFTWGQYEYGQL 165

Query: 452 GL--------RSSSISFHT---PVLVTGLSSH--QIVDVSIGDSHVLALSQYNEVYAWGS 498
           GL        R+ S  F     P +V     +  +IV+V+ G  H L LS+  +VY+ G 
Sbjct: 166 GLGKISSQQRRNESSVFQQGIFPSIVEFFQQNNIKIVNVACGGKHTLFLSRNGQVYSMGD 225

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
           N+ GQ G              +G++D+  + I
Sbjct: 226 NSFGQLG--------------IGMQDIQYKDI 243



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 76/174 (43%), Gaps = 23/174 (13%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQ--PLPKRVPLEAAIVSLSVSK 275
           I ++  G   T  L   G +   G    G LG+    IQ   +P RVP  + I  +S   
Sbjct: 201 IVNVACGGKHTLFLSRNGQVYSMGDNSFGQLGIGMQDIQYKDIPTRVPSLSNITKIS--- 257

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            S  H   ++S G+++ WG G  G            PK    G+    +  VS G    A
Sbjct: 258 -SGHHSAALSSSGQLFFWGTGVFGSF--------YEPK----GVIDSDIIDVSVGGCFGA 304

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           A+  DGL++TWG    G LG GD + R  P  VT L +  V  V+CG S  L +
Sbjct: 305 ALDRDGLIWTWGSNSKGELGVGDFEPRPYPYPVTYLKNKKVNKVACGGSFALAI 358


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 29/352 (8%)

Query: 190 VYTWGCNLHHQ-----ILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLV 242
           ++ WG  +H +     I DE       PR       + +  I  G+  T  + + G +  
Sbjct: 1   MFCWGSTIHGELGLGGIEDE---NIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYS 57

Query: 243 YGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G    G L +   +   + +P   A V   ++ C   H L V   G+++SWG    G+L
Sbjct: 58  CGNNDYGQLGHEKARKRLQLIPGLDAFVFKKIA-CGSCHTLAVNEWGQLFSWGCNMKGQL 116

Query: 302 GHGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--- 357
           G  +   ++R P+++   L    + Q++ G  HS A+T DG LY+WG    G+LG G   
Sbjct: 117 GLNSVDCTERTPRMVKA-LGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHT 175

Query: 358 --DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
             ++K +   TL      +  ++CG  HT+V+S+ G  V++ G    G+LG  DT +   
Sbjct: 176 VTEIKPKRIITLAA--VPIAFIACGGYHTVVISKSG-VVFAWGRNTFGQLGLNDTQQRIV 232

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           P  +  LR  +V     G  FSV LT DG VF  G G+       + ++   P  V  L 
Sbjct: 233 PCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELM 292

Query: 471 SHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
              +  +S G  H LAL      VYAWG    GQ G +  S     P  V+G
Sbjct: 293 GSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG-NRASRSATTPLVVLG 343



 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 11/240 (4%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++++WGCN+  Q+ L+ V      PR+      S I  I  G   +  L + G L  +G 
Sbjct: 104 QLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGS 163

Query: 245 --KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             +G LG+ + T+  + PKR+ +  A V ++   C   H + ++  G V++WG    G+L
Sbjct: 164 NREGQLGIGSHTVTEIKPKRI-ITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +T  QR     +  L   +V   + G   S  +T DG ++T G G +G+LGHG+  +
Sbjct: 223 GLNDT-QQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMN 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  +SCG+ HTL L      V++ G G  G+LG+  +   TTP V+
Sbjct: 282 EILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVV 341



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 13/206 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRH--TPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           ++ WG   HG LG G ++  +   P  V   + ++V  ++CGE++T+ ++ DG  V+S G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQ-VYSCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           + + G+LGHE   K    ++I  L  F  +K+  G+  ++A+   G +F WG      LG
Sbjct: 60  NNDYGQLGHEKARK--RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L S   +  TP +V  L +  IV ++ G  H +AL+   E+Y+WGSN  GQ G  + +  
Sbjct: 118 LNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVT 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSI 538
             +P +++ L  V +  I  G   ++
Sbjct: 178 EIKPKRIITLAAVPIAFIACGGYHTV 203



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSS 456
           G LG  G ED   +  P+ ++  +   V ++  G +++V +T DG V+  G    G    
Sbjct: 10  GELGLGGIEDE-NIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQLGH 68

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             +     L+ GL +     ++ G  H LA++++ ++++WG N  GQ G ++       P
Sbjct: 69  EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTP 128

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
             V  L    + QI  G   SIA T
Sbjct: 129 RMVKALGTSVIVQIACGIEHSIALT 153


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 23/289 (7%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  
Sbjct: 35  SIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIIH 88

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            L L+ DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+ 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 208 SGAVFGWGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A  VP S
Sbjct: 267 GAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLAL-VPSS 313



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 201 ILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           I   ++G  + P++    S+  I+ +  G   +  L   G +   G   KG LG      
Sbjct: 14  ISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN 73

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKL 314
           +P       +  I+ ++   C E+H L ++  G+++SWG G  G+LG   T  S   P+L
Sbjct: 74  KPEQIGALADQHIIHVA---CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSD 373
           I   L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  
Sbjct: 131 IQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEG 189

Query: 374 V--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           +    V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  + 
Sbjct: 190 IPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYIS 248

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLA 486
            G   +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLA 308

Query: 487 L-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           L      +YA+G    GQ G  +  N V  PS V G
Sbjct: 309 LVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPVKG 343



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  124 bits (311), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 28/257 (10%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +T EG V+S+G G HG+LGHGN  +   P+ I        V ++SAG +HS A+T+
Sbjct: 48  HSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTK 107

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA-------------------VSCG 380
           DG  Y++G G  GRLGHGD   +  P  +T L   GA                   V+ G
Sbjct: 108 DGKAYSFGFGMFGRLGHGDETDQLLPREIT-LRGHGASPPVGDRVEENETDPVIEHVAAG 166

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             H+L+L+ DG  V+S G+G +G LGH D  K   P +IEAL   R+  +  G++ ++ L
Sbjct: 167 YFHSLLLTTDGR-VYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVL 225

Query: 441 TWDGLVFWWGLG------LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G VF++GL              F       GL + +I +V  G+ H L L++  ++ 
Sbjct: 226 DDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGL-AEEITEVRAGEGHCLLLTREGKLL 284

Query: 495 AWGSNTMGQCGQDNFSN 511
           A+G    G+ G  + +N
Sbjct: 285 AFGLGKNGRLGLGDETN 301



 Score =  105 bits (263), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 31/237 (13%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G V S G G+HG LG G+ ++Q      +  L   RV  VSAG  HS  +TE+G ++++G
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62

Query: 348 EGDHGRLGHGDLKSRHTPTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
            G HGRLGHG+ ++   P  +      + V  +S G +H+L L++DG   +S G G  G+
Sbjct: 63  NGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKA-YSFGFGMFGR 121

Query: 405 LGHEDT------------GKVTTPKVIEALRKFR----VRKVCAGTSFSVALTWDGLVFW 448
           LGH D             G   +P V + + +      +  V AG   S+ LT DG V+ 
Sbjct: 122 LGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYS 181

Query: 449 WGLGL--------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           +G G+        R   +    P ++  L+  +IV ++ G ++ L L     V+ +G
Sbjct: 182 FGAGVMGALGHGDRDKRLR---PTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG 235



 Score =  103 bits (258), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 45/318 (14%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
           + AG   + +L   G +  +G G    LG  N      P+R+        ++       H
Sbjct: 42  VSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTH 101

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM------GGLYGKRVTQ-------- 326
            L +T +G+ YS+G G  G+LGHG+   Q  P+ I           G RV +        
Sbjct: 102 SLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIE 161

Query: 327 -VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESH 383
            V+AG+ HS  +T DG +Y++G G  G LGHGD   R  PT++  L+D  + +++CG ++
Sbjct: 162 HVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSAN 221

Query: 384 TLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           TLVL  +G    + +      K        V  P  +    +  + +V AG    + LT 
Sbjct: 222 TLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEE--ITEVRAGEGHCLLLTR 279

Query: 443 DGLVFWWGLG-------------LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-- 487
           +G +  +GLG             L  ++++F +     G +S +I D++ G  H LAL  
Sbjct: 280 EGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPS----NGTTSVEI-DIACGAKHGLALVD 334

Query: 488 --SQYNEVYAWGSNTMGQ 503
              +   +YA+GS   GQ
Sbjct: 335 VPGEGPRLYAFGSGDQGQ 352



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 35/210 (16%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLG----------LANTTIQPLPKRVPLEAAIVS 270
           I H+ AG F + LL + G +  +G G +G          L  T I+ L  R      IVS
Sbjct: 160 IEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADR-----RIVS 214

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGV--GEHGKLGHGNTLSQRRPKLIMGGL-YGKRVTQV 327
           ++   C  A+ L +  EG V+ +G+   E  K   G    Q R  L+   L   + +T+V
Sbjct: 215 MA---CGSANTLVLDDEGRVFFFGLDYSEFPKFTEG----QARFVLLPSALGLAEEITEV 267

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA-----VSCGES 382
            AG  H   +T +G L  +G G +GRLG GD  +R  PT VT  S+        ++CG  
Sbjct: 268 RAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAK 327

Query: 383 HTLVLSQ---DGHTVWSMGSGNLGKL--GH 407
           H L L     +G  +++ GSG+ G+L  GH
Sbjct: 328 HGLALVDVPGEGPRLYAFGSGDQGQLANGH 357



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 28/256 (10%)

Query: 153 PLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRP 212
           P+GDR   N    +         +++    +     +VY++G  +   +    R K  RP
Sbjct: 146 PVGDRVEENETDPVIEHVAAGYFHSL----LLTTDGRVYSFGAGVMGALGHGDRDKRLRP 201

Query: 213 RLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGWLGLANTT-----IQPLPKRVPLE 265
            +    ++ R   +  G   T +LD  G +  +G  +      T        LP  + L 
Sbjct: 202 TMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLA 261

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
             I  +   +  E H L +T EG++ ++G+G++G+LG G+  ++  P  +     G    
Sbjct: 262 EEITEV---RAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSV 318

Query: 326 QV--SAGHSHSAAVT----EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV----- 374
           ++  + G  H  A+     E   LY +G GD G+L +G  + R +PT  T          
Sbjct: 319 EIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGHRQDRASPTATTTSLPALLHQH 378

Query: 375 ---GAVSCGESHTLVL 387
               A+S G++H+LVL
Sbjct: 379 IVPAAISAGKAHSLVL 394


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 23/289 (7%)

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQ 326
           S+    C   H + +  +GEVY+ GV   G+LGH   GN   Q      +G L  + +  
Sbjct: 35  SIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQ------IGALADQHIIH 88

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESH 383
           V+ G SHS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            L L+ DG   ++ G  + G+LG  ++    T+P+ + +L    + +V AG + S AL+ 
Sbjct: 149 CLALAADGQ-FFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSL 207

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G VF WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +
Sbjct: 208 SGAVFGWGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           G+ + GQ G D+ ++ V+ P +V+ L    V QI  G   ++A  VP S
Sbjct: 267 GAGSCGQLGHDSVNDEVN-PRRVLELMGSEVTQIACGRQHTLA-LVPSS 313



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 201 ILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           I   ++G  + P++    S+  I+ +  G   +  L   G +   G   KG LG      
Sbjct: 14  ISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN 73

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKL 314
           +P       +  I+ ++   C E+H L ++  G+++SWG G  G+LG   T  S   P+L
Sbjct: 74  KPEQIGALADQHIIHVA---CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL 130

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSD 373
           I   L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  
Sbjct: 131 IQK-LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEG 189

Query: 374 V--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           +    V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  + 
Sbjct: 190 IPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYIS 248

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLA 486
            G   +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA
Sbjct: 249 CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLA 308

Query: 487 L-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           L      +YA+G    GQ G  +  N V  PS V G
Sbjct: 309 LVPSSGLIYAFGCGAKGQLGTGHTCN-VKCPSPVKG 343



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQT 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 168/393 (42%), Gaps = 44/393 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+SWG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFSWGQNKYGQLGLGI 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
             +++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                +  C     S  +   G ++ +GLG            L TG +S++    ++  +
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                  YN          GQC           P  V   E  CV++I +G   S ++  
Sbjct: 345 WF----PYN----------GQC-----------PPDVGSEEYFCVKRIFSGGDQSFSHYS 379

Query: 543 PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
            P N      F   C D     +T+    ++++
Sbjct: 380 NPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L+    + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 NKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV++WG N  GQ G     N  
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 ASPQLIKSLTGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H   V  +G VY+ G  + G+LGH    S+++P+ + G L  + +  VS G +H+ 
Sbjct: 41  CGNRHTGFVLDDGTVYTCGCNDLGQLGHDK--SRKKPEQV-GALDAQIIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +++WG   HG++G    +     P  +  LSD+    V+CG  H+L LS++ +
Sbjct: 98  ALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESN 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            ++S G    G+LG   +  K + P+ I++L       + AG   S ALT  G +F WG 
Sbjct: 158 -IYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +     P L+  L S +I+ +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDET-DRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ V+ P KV  L    V QI  G   ++A+ VP S    S
Sbjct: 276 HNSASHEVN-PRKVFELMGNIVTQIACGRQHTLAF-VPSSGRIYS 318



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 124/265 (46%), Gaps = 26/265 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       +  RR    +     K V  V  G+ H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFIN----KNVRDVGCGNRHTGFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L    + AVSCGE+HTL L+  G  V+S G    G++
Sbjct: 60  CNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQ-VFSWGHAAHGQI 116

Query: 406 G---HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G    ED  +V  P+ I++L   ++ +V  G   S+AL+ +  ++ WG      LGL S 
Sbjct: 117 GVSIAEDYIRV--PRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSE 174

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                 P  +  LS      ++ G  H  AL+    ++ WG N  GQ G ++ ++  D P
Sbjct: 175 KRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSD-P 233

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           + +  L    +  IC G   + A T
Sbjct: 234 ALLKSLRSQKIIYICCGEDHTAALT 258



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 123/270 (45%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI-RHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           VYT GCN   Q L   + +    ++ +L + I   +  G+  T  L+  G +  +G    
Sbjct: 55  VYTCGCNDLGQ-LGHDKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAH 113

Query: 249 GLANTTIQPLPKRVPLEAAIVS---LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G    +I     RVP     +S   +    C   H L ++ E  +YSWG  ++G+LG G+
Sbjct: 114 GQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGS 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              +      +  L G     ++AG  HS A+T  G ++ WG    G+LG  D   R  P
Sbjct: 174 EKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH        P+ +  L 
Sbjct: 234 ALLKSLRSQKIIYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSASHEVNPRKVFELM 292

Query: 424 KFRVRKVCAGTSFSVALT-WDGLVFWWGLG 452
              V ++  G   ++A     G ++ +GLG
Sbjct: 293 GNIVTQIACGRQHTLAFVPSSGRIYSFGLG 322



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGDL------KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G +      + R     + +  +V  V CG  HT  +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK--NVRDVGCGNRHTGFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            G  +LG+LGH+ + K   P+ + AL    +  V  G + ++AL   G VF WG      
Sbjct: 58  CGCNDLGQLGHDKSRK--KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           +G+  +      P  +  LS  QIV V+ G  H LALS+ + +Y+WG N  GQ G  +  
Sbjct: 116 IGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEK 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +    I AG   S A T+
Sbjct: 176 RKESAPRHIKSLSGIPFAHIAAGGGHSFALTI 207



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V++WG   H QI   +     R PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL +   +    R     + +  +       H   +T  G ++ WG  + G+L
Sbjct: 163 QNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLNDETDRSDPALLKS-LRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASH 281

Query: 362 RHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL    V  ++CG  HTL        ++S G G  G+LG   T    +P ++
Sbjct: 282 EVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   +  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 160/372 (43%), Gaps = 44/372 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                +  C     S  +   G ++ +GLG            L TG +S++    ++  +
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAYT 541
                        W S   GQC QD            +G ED  CV++I +G   S ++ 
Sbjct: 345 -------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAF 553
             P +      F
Sbjct: 379 SSPQSCGPPDDF 390



 Score =  109 bits (273), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 161/343 (46%), Gaps = 24/343 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N+  Q  D   G+ S P      S +  + A  F +  + + G    +G    G
Sbjct: 332 VWAWGSNVEGQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHG 391

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +T   P P RV     +V+++      +H L + ++G V +WG    G+LG G  
Sbjct: 392 ELGDGSTRNSPAPVRVDGLKEVVAVA---AGSSHSLALLADGTVLAWGDNTFGQLGDGTR 448

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            S   P  + G L G  V  V+AG SHS A+  DG ++TWG   +G+LG G    R+ P 
Sbjct: 449 ASHSVPAQVRG-LRG--VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTYRYEPV 505

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L  V AV+ G +H+L +  DG T W+ G    G+LG  D    + P  +E     +
Sbjct: 506 AVKGLEGVVAVAAGGNHSLAVRSDG-TAWAWGENVKGQLG--DGTLTSRPAPVEVKAAAK 562

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
                 G S +V    DG  + WG      LG   S+ S   P+ V G  + ++V V+ G
Sbjct: 563 AVAAAQGLSLAVGS--DGFPWAWGNNSSGQLG-DGSTTSRPMPMRVQG--AGEVVAVAAG 617

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
           + H LALS    V+AWG N  GQ G+      +  P++V GL 
Sbjct: 618 NGHSLALSPEGGVWAWGQNARGQLGEGTLDRRL-APTRVQGLS 659



 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 149/290 (51%), Gaps = 30/290 (10%)

Query: 263 PLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           P++   V+  V+  + A H L V+++G V++WG   HG+LG    +++  P L + G   
Sbjct: 203 PVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLG----IARTTPLLSIPG--- 255

Query: 322 KRVTQV------SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
            RV +V      +AG +HS AV +DG ++ WG   HG+LG+G +     P  V  L  VG
Sbjct: 256 -RVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVG 314

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           AV+ G +H+L +  DG TVW+ GS   G+ G   TG+++ P          V  V A   
Sbjct: 315 AVAAGSNHSLAVRDDG-TVWAWGSNVEGQRGDGTTGQLSAP--TRVPGVSGVVGVAANVF 371

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            S+A++ DG  + WG      LG  S+  S   PV V GL   ++V V+ G SH LAL  
Sbjct: 372 HSLAVSADGSAWAWGHNSHGELGDGSTRNS-PAPVRVDGL--KEVVAVAAGSSHSLALLA 428

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              V AWG NT GQ G D        P++V GL  V    + AGS  S+A
Sbjct: 429 DGTVLAWGDNTFGQLG-DGTRASHSVPAQVRGLRGVVA--VAAGSSHSLA 475



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 143/315 (45%), Gaps = 63/315 (20%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           +H L+V  +G V++ G    G+LG G T  +R P  ++G L G  V  V+AG  HS AV 
Sbjct: 20  SHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLG-LSG--VVTVAAGGGHSLAVH 76

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG ++ WG    G+LG G   +R  P  V  LS V AV+ G  H+L +S DG TVW+ G
Sbjct: 77  SDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSGVVAVAAGGYHSLAVSADG-TVWAWG 135

Query: 399 SGNLGKLGH------------------------------------------------EDT 410
           + + G+LG                                                  + 
Sbjct: 136 NNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNR 195

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
           G+  + + ++ LR      V AG + S+A++ DG V+ WG      LG+  ++     P 
Sbjct: 196 GEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPG 255

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
            V  +     V ++ GD+H LA+     V+AWGSN  GQ G + F     +P +V GLE 
Sbjct: 256 RVPEVRGS--VAMAAGDNHSLAVRDDGTVWAWGSNGHGQLG-NGFMVDNSEPGRVPGLEG 312

Query: 525 VCVRQICAGSLFSIA 539
           V    + AGS  S+A
Sbjct: 313 VGA--VAAGSNHSLA 325



 Score = 81.3 bits (199), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 12/226 (5%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +A   V+TWG NL+ Q+ D        P        +  + AG   +  + S G    +G
Sbjct: 477 LADGTVWTWGYNLNGQLGDGTTTYRYEPVAVKGLEGVVAVAAGGNHSLAVRSDGTAWAWG 536

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              KG LG    T +P P          +      ++   L V S+G  ++WG    G+L
Sbjct: 537 ENVKGQLGDGTLTSRPAPVE-----VKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQL 591

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+T S+  P  + G      V  V+AG+ HS A++ +G ++ WG+   G+LG G L  
Sbjct: 592 GDGSTTSRPMPMRVQGA---GEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDR 648

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           R  PT V  LS V AV+ G + +L +  DG +VWS G    G+LG+
Sbjct: 649 RLAPTRVQGLSGVVAVAAGGAFSLAVRDDG-SVWSWGDNAFGQLGN 693



 Score = 63.9 bits (154), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 94/234 (40%), Gaps = 56/234 (23%)

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHT 384
            +++ G SHS +V +DG ++  G    G+LG G    R  P  V  LS V  V+ G  H+
Sbjct: 13  ARIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLSGVVTVAAGGGHS 72

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L +  DG TVW+ G+ + G+LG         P  +  L    V  V AG   S+A++ DG
Sbjct: 73  LAVHSDG-TVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSG--VVAVAAGGYHSLAVSADG 129

Query: 445 LVFWWG-------------------------------------LGLRSSSI--------- 458
            V+ WG                                     L +RS  I         
Sbjct: 130 TVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLY 189

Query: 459 -------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                   F++   V  L     V VS G +H LA+S    V+AWG N+ GQ G
Sbjct: 190 GQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSHGQLG 243


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   +  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 160/372 (43%), Gaps = 44/372 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                +  C     S  +   G ++ +GLG            L TG +S++    ++  +
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAYT 541
                        W S   GQC QD            +G ED  CV++I +G   S ++ 
Sbjct: 345 -------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAF 553
             P +      F
Sbjct: 379 SSPQSCGPPDDF 390



 Score =  109 bits (273), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 185/401 (46%), Gaps = 47/401 (11%)

Query: 132 LIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYN-IG----DTD---- 182
           ++R A   +L   +L    I  L DR SS    +++  +  + T+  +G    DT+    
Sbjct: 1   MLRRAAPSHLAFRSLQRRRIGYLADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPV 60

Query: 183 -ISVAHSKVYTWGCNLHHQILDEVRGKC-SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
            IS      +T         +  ++G+  ++PRL ++      +  G F + L      +
Sbjct: 61  LISTLKLAAFT--------GMAPIQGRMPAKPRLGNV-----GVTCGLFHSVLFAEQD-V 106

Query: 241 LVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            V+GKG    LG+     Q  P   P    I  + ++     H + +T  G VY+WG G 
Sbjct: 107 FVWGKGDGGRLGIDTEFNQYKPYVNPR---IKRVQMASAGGLHNIALTEVGNVYTWGYGA 163

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLG 355
            G LGHG+   +  P+L+  G +  R+  VSAG SH+AAVTE G LYTWG  EG+ GRLG
Sbjct: 164 FGALGHGSYERELLPRLLE-GPWKDRIVHVSAGGSHTAAVTESGELYTWGRDEGE-GRLG 221

Query: 356 HG-----DLKSRHTPTLVTELS-DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           HG     D  +   PT V  L   +  V CG   T+ L++ G  +WS G     +LGH  
Sbjct: 222 HGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQ-LWSWGGNANHELGHGT 280

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSI-SFHTPV 464
                 PKV+ AL    + +V  G   + ALT DG V  WG G    L   ++ +   P 
Sbjct: 281 RANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPA 340

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +V  ++      ++ G +   A+++  ++Y WG N   Q G
Sbjct: 341 IVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLG 381



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 30/283 (10%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLI----------MGGLYGKRVTQ-------VS 328
           +E EV++WG G HG++GHG+  +++ P LI          M  + G+   +       V+
Sbjct: 33  AELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVT 92

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLS 388
            G  HS    E   ++ WG+GD GRLG     +++ P +   +  V   S G  H + L+
Sbjct: 93  CGLFHSVLFAEQD-VFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALT 151

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           + G+ V++ G G  G LGH    +   P+++E   K R+  V AG S + A+T  G ++ 
Sbjct: 152 EVGN-VYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYT 210

Query: 449 WGLGLRSSSISFHTP-VLVTGLSSH----QIVDVSI-----GDSHVLALSQYNEVYAWGS 498
           WG       +    P ++  G  S     Q +DV I     G    +AL++  ++++WG 
Sbjct: 211 WGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWSWGG 270

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N   + G    +N   +P  V  LEDV + Q+  G   + A T
Sbjct: 271 NANHELGHGTRANNW-KPKVVAALEDVTLVQVACGGFHAAALT 312



 Score = 77.4 bits (189), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 29/223 (13%)

Query: 188 SKVYTWGCN-----LHH---QILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTG 238
            ++YTWG +     L H    I+DE  G  SRP ++Q+L   I  +  G F T  L  +G
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDE--GALSRPTKVQALDVPIALVYCGGFFTMALTKSG 263

Query: 239 GLLVYGKGW---LGLANTTIQPLPKRVPLEAAI--VSLSVSKCSEAHVLTVTSEGEVYSW 293
            L  +G      LG         PK V   AA+  V+L    C   H   +T +G+V +W
Sbjct: 264 QLWSWGGNANHELGHGTRANNWKPKVV---AALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G +G+LGHG TL   +   I+  +  K  T ++ G + +AA+TE+G LYTWG+    +
Sbjct: 321 GYGGNGQLGHG-TLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQ 379

Query: 354 LGHGDLKSRHTPTLVTELS---------DVGAVSCGESHTLVL 387
           LG   LK      ++ +           +V  VSCG +H + +
Sbjct: 380 LGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCI 422


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 32/313 (10%)

Query: 244 GKGWLG--LANTTIQPLPKRV---PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G+G LG  L+ +TIQ +P+R+   P +    +++   C E H + +T +G+++S G    
Sbjct: 12  GEGQLGVRLSESTIQ-VPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD 70

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HG 357
           G+LG G+          +      ++ Q+SAG SH+ +VT+DG ++ WG  +HG+LG   
Sbjct: 71  GQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMES 130

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGK-VTT 415
               + TP  V E++D+  V+ G +H + L + G   VW          G +  G+ +  
Sbjct: 131 KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVW----------GEQADGRCIHR 180

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG---LRSSSISFHTPVLV 466
           P+ +E L    + +V AG    +AL+  G VF WG      LG   LR  +   H    V
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQH----V 236

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             +    +V+ + GD+H + L+     +++GS+ +GQCG          P+ V  L    
Sbjct: 237 HQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSH 296

Query: 527 VRQICAGSLFSIA 539
           V +I AG+  +IA
Sbjct: 297 VTRIAAGACHTIA 309



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)

Query: 188 SKVYTWGCNLHHQILDEVRGKC-SRP----RLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
            +V+ WG        ++  G+C  RP    +L  +P  I  + AG      L ++G +  
Sbjct: 164 GRVFVWG--------EQADGRCIHRPEPVEQLSGVP--IVRVLAGARHCLALSASGAVFT 213

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G+   G LG+ +   Q   + V  +   + +  + C + H + +T  G  +S+G    G
Sbjct: 214 WGQNNSGELGIDDLRPQTSVQHVH-QMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALG 272

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           + G G  + +R     +  L G  VT+++AG  H+ A+ + G  Y +G    G+LG+G +
Sbjct: 273 QCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKI 331

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDG 391
            ++ TP    EL  V  V  G   T  +   G
Sbjct: 332 MTQSTPRKTDELDHVTGVFAGYHQTFFVRSSG 363



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 22/244 (9%)

Query: 188 SKVYTWGCNLHHQILDEVRGKC-SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
            +V+ WG N H Q+  E +      PR     ++I  + +G      LD  G + V+G+ 
Sbjct: 113 GRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWGEQ 172

Query: 247 WLGLANTTIQPLPK--RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             G      +P+ +   VP+   +           H L +++ G V++WG    G+LG  
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGAR-------HCLALSASGAVFTWGQNNSGELG-- 223

Query: 305 NTLSQRRPKLIMGGLY---GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLK 360
             +   RP+  +  ++   G  V + + G +H+  +T  G  +++G    G+ G G  ++
Sbjct: 224 --IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVE 281

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
            R  PT V++L  S V  ++ G  HT+ + +     +  G  + G+LG+      +TP+ 
Sbjct: 282 KRTNPTAVSDLIGSHVTRIAAGACHTIAICKG--APYPFGLNSSGQLGNGKIMTQSTPRK 339

Query: 419 IEAL 422
            + L
Sbjct: 340 TDEL 343


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 169/360 (46%), Gaps = 26/360 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N   Q+ D        P +Q++  S    + AG+  + +  S G +  +G   +
Sbjct: 303 VWAWGQNTRGQLGDGSMTASLTP-VQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIE 361

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G  G  +      P +V   +   +++  K   AH L V S+G V++WG    G+LG G 
Sbjct: 362 GQRGDGSAKTSTAPVQVTALSGGFTVAAGK---AHALAVRSDGTVWAWGQNLFGQLGDGT 418

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            + +  P  + G L G     V+AG  HS  +  DG ++ WG+   G+LG G    R  P
Sbjct: 419 RMQRTAPVQVTG-LSGG--VAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAP 475

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             VTELS V AV+ G SH+L +S DG TVW+ GS   G+LG   T    TP  +  L   
Sbjct: 476 VQVTELSGVVAVAAGTSHSLAVSSDG-TVWAWGSNASGQLGDGTTRARLTPVQVAGLSG- 533

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V  V AG   S+A+  DG V+ WG      LG   ++    TPV V GLS    V  + 
Sbjct: 534 -VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLG-DGTNTQRPTPVRVPGLSGG--VAAAA 589

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G  H L L     V+ WG+N  GQ G +  +N    P +V GL       + AG   S+A
Sbjct: 590 GYFHSLVLRSDGTVWGWGNNAYGQLG-NGTANASFSPVQVTGLSGGVA--VAAGDFQSLA 646



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 178/371 (47%), Gaps = 24/371 (6%)

Query: 179 GDTDISVAHSK--VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDS 236
           G+T   VA S   V+ WG N+  Q  D      + P   +  S    + AG+     + S
Sbjct: 340 GETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALSGGFTVAAGKAHALAVRS 399

Query: 237 TGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWG 294
            G +  +G+   G L + T   + +  P++   +S  V+    + H L +  +G V++WG
Sbjct: 400 DGTVWAWGQNLFGQLGDGT--RMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWG 457

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
               G+LG G T +QR   + +  L G  V  V+AG SHS AV+ DG ++ WG    G+L
Sbjct: 458 QNTSGQLGDGTT-AQRPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSNASGQL 514

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           G G  ++R TP  V  LS V AV+ G  H+L +  DG TVW+ G+ +  +LG     +  
Sbjct: 515 GDGTTRARLTPVQVAGLSGVVAVAAGYFHSLAVRSDG-TVWAWGNNSFFQLGDGTNTQRP 573

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
           TP  +  L         AG   S+ L  DG V+ WG      LG  +++ SF +PV VTG
Sbjct: 574 TPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASF-SPVQVTG 630

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           LS    V V+ GD   LA+     V AWG N  GQ G    +  +  P  V GL      
Sbjct: 631 LSGG--VAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRL-APVGVNGLSGGMA- 686

Query: 529 QICAGSLFSIA 539
            + AG+ FS+A
Sbjct: 687 -VAAGNGFSLA 696



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 125/255 (49%), Gaps = 16/255 (6%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
              + H L V S+G V++WG    G+LG G T  +  P  + G L G    +V+AG  HS
Sbjct: 138 AAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAG-LSGG--VKVAAGDGHS 194

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            AV  DG ++ WG  D G+LG G    R  P  V  LS V AV+ G SH+L +  DG TV
Sbjct: 195 LAVCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDG-TV 253

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           W+ G  + G+LG   T    TP  +  L       V AG   S+A+  DG V+ WG    
Sbjct: 254 WAWGRNSDGQLGDGTTSARLTPVQVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTR 311

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG  S + S  TPV   GLS  +   V+ G++H L       V+AWG+N  GQ G D 
Sbjct: 312 GQLGDGSMTASL-TPVQAIGLSEGEA--VAAGETHSLVARSDGTVWAWGNNIEGQRG-DG 367

Query: 509 FSNPVDQPSKVVGLE 523
            +     P +V  L 
Sbjct: 368 SAKTSTAPVQVTALS 382



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 134/271 (49%), Gaps = 18/271 (6%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
               +H L +  +G V++ G    G+LG G T  +R P  ++G L       V+AG SHS
Sbjct: 38  AAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVG-L--SDAVLVAAGSSHS 94

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+  DG  + WG    G LG G    R  P  VT LS+  AV+ G+ H+LV+  DG TV
Sbjct: 95  LAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDGHSLVVRSDG-TV 153

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           W+ G  + G+LG   T +   P  +  L      KV AG   S+A+  DG V+ WG    
Sbjct: 154 WAWGWNSDGQLGDGTTRERHVPVQVAGLSGG--VKVAAGDGHSLAVCLDGTVWAWGRNDS 211

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG   +++    PV V GLS   +V V+ G SH LA+     V+AWG N+ GQ G D 
Sbjct: 212 GQLG-DGTTVQRSAPVQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLG-DG 267

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            ++    P +V GL       + AG   S+A
Sbjct: 268 TTSARLTPVQVTGLSGGVA--VAAGMFHSLA 296



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 108/221 (48%), Gaps = 15/221 (6%)

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHT 384
           ++++AG SHS A+  DG ++  G    G+LG G    R  P  V  LSD   V+ G SH+
Sbjct: 35  SRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVLVAAGSSHS 94

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L +  DG T W+ G    G+LG   T + T P  +  L +     V AG   S+ +  DG
Sbjct: 95  LAIRSDG-TAWAWGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVVRSDG 151

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            V+ WG      LG   ++   H PV V GLS    V V+ GD H LA+     V+AWG 
Sbjct: 152 TVWAWGWNSDGQLG-DGTTRERHVPVQVAGLSGG--VKVAAGDGHSLAVCLDGTVWAWGR 208

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           N  GQ G D  +     P +V GL  V    + AGS  S+A
Sbjct: 209 NDSGQLG-DGTTVQRSAPVQVAGLSGVVA--VAAGSSHSLA 246



 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 174/413 (42%), Gaps = 90/413 (21%)

Query: 104 LTKSLPPYNA-ALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNS 162
           +T SL P  A  L+  E V    TH  V   RS   V+        +NI+  G R   ++
Sbjct: 319 MTASLTPVQAIGLSEGEAVAAGETHSLV--ARSDGTVWAW-----GNNIE--GQRGDGSA 369

Query: 163 NTDIDSTSTPKLTYNIGDTDISV--AHS-------KVYTWGCNLHHQILDEVRGKCSRPR 213
            T   ST+  ++T   G   ++   AH+        V+ WG NL  Q+ D  R + + P 
Sbjct: 370 KT---STAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPV 426

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVS 270
             +  S    + AG   +  L   G +  +G+   G LG   T  +P P +V   + +V+
Sbjct: 427 QVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAPVQVTELSGVVA 486

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           ++      +H L V+S+G V++WG    G+LG G T ++  P  + G L G  V  V+AG
Sbjct: 487 VA---AGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAG-LSG--VVAVAAG 540

Query: 331 HSHSAAVTEDGLLYTWGE------GD---------------------------------- 350
           + HS AV  DG ++ WG       GD                                  
Sbjct: 541 YFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSD 600

Query: 351 ----------HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
                     +G+LG+G   +  +P  VT LS   AV+ G+  +L +  DG TV + G  
Sbjct: 601 GTVWGWGNNAYGQLGNGTANASFSPVQVTGLSGGVAVAAGDFQSLAVRSDG-TVRAWGDN 659

Query: 401 NLGKLGHEDTGKVTT---PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
             G+LG    G VTT   P  +  L       V AG  FS+A+   G++  WG
Sbjct: 660 IYGQLGD---GTVTTRLAPVGVNGLSGGMA--VAAGNGFSLAVHSGGMLHAWG 707



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 13/173 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP---RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           V+ WG N   Q+ D       RP   R+  L   +    AG F + +L S G +  +G  
Sbjct: 553 VWAWGNNSFFQLGDGT--NTQRPTPVRVPGLSGGVA-AAAGYFHSLVLRSDGTVWGWGNN 609

Query: 247 WLG-LANTTIQPLPKRVPLEAAIVSLSVS-KCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
             G L N T        P++   +S  V+    +   L V S+G V +WG   +G+LG G
Sbjct: 610 AYGQLGNGTANA--SFSPVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDG 667

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            T++ R   + + GL G     V+AG+  S AV   G+L+ WG    G+LGHG
Sbjct: 668 -TVTTRLAPVGVNGLSGGMA--VAAGNGFSLAVHSGGMLHAWGYNTDGQLGHG 717


>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 411

 Score =  124 bits (310), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 25/334 (7%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVS 274
           SL + +  I  G   + +L   G +  +G    G L + T  P    + ++     +S++
Sbjct: 33  SLFAAVPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLEDVVSIA 92

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP---KLIMGGLYGKRVTQVSAGH 331
              E H L V S+G V++WG    G+LG G   ++  P   K I      K VT++ AG 
Sbjct: 93  AGWE-HNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTI------KDVTEIDAGF 145

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG 391
            HS A+  DG ++ WG  +  +LG G     + P  V  L++V AVS G  H LVL  DG
Sbjct: 146 YHSIALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADG 205

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWG 450
            T+W  G+   G+LG    G +T   +   +  F     + +G +++VA+  DG ++ WG
Sbjct: 206 -TIWGWGANGYGQLG---DGTMTESSIPTPVYDFNGAVFIASGNNYNVAVKADGSIWGWG 261

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +         +  +   P+ + GL++   V ++ G  H L L Q   V + G N  GQ G
Sbjct: 262 MNTYGQLGNGTQTNSKIPIRINGLNNS--VSIATGGYHALILQQDGTVLSMGYNRTGQLG 319

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               SN      KV GL DV    I AG   S+A
Sbjct: 320 TGATSNYQYTTLKVHGLSDVV--SIAAGYYHSLA 351



 Score =  100 bits (249), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 86/329 (26%), Positives = 141/329 (42%), Gaps = 28/329 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           V+ WG N   Q+ D      + PR  ++      ++  I AG      + S G +  +G 
Sbjct: 57  VWAWGGNHAGQLGDGT----TNPRKFAIQVKGLEDVVSIAAGWEHNLAVKSDGTVWAWGN 112

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG      +  P +V     I  ++       H + + S+G V+ WG  E  +LG
Sbjct: 113 NRFGQLGDGTNENRNTPVKV---KTIKDVTEIDAGFYHSIALQSDGTVWVWGNNELDQLG 169

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G      +P  + G      V  VS G+ H+  +  DG ++ WG   +G+LG G +   
Sbjct: 170 DGTKSDAYKPMQVQGL---NNVVAVSGGNHHNLVLKADGTIWGWGANGYGQLGDGTMTES 226

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             PT V + +    ++ G ++ + +  DG ++W  G    G+LG+        P  I  L
Sbjct: 227 SIPTPVYDFNGAVFIASGNNYNVAVKADG-SIWGWGMNTYGQLGNGTQTNSKIPIRINGL 285

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
                  +  G   ++ L  DG V   G      LG  ++S   +T + V GLS   +V 
Sbjct: 286 NN--SVSIATGGYHALILQQDGTVLSMGYNRTGQLGTGATSNYQYTTLKVHGLSD--VVS 341

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           ++ G  H LAL +   ++AWG+N  GQ G
Sbjct: 342 IAAGYYHSLALKKDGTIWAWGNNEYGQLG 370



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 8/185 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   ++ WG N + Q+ D    + S P      +    I +G      + + G +  +G 
Sbjct: 203 ADGTIWGWGANGYGQLGDGTMTESSIPTPVYDFNGAVFIASGNNYNVAVKADGSIWGWGM 262

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG    T   +P R+      VS++       H L +  +G V S G    G+LG
Sbjct: 263 NTYGQLGNGTQTNSKIPIRINGLNNSVSIATGG---YHALILQQDGTVLSMGYNRTGQLG 319

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T + +   L + GL    V  ++AG+ HS A+ +DG ++ WG  ++G+LG G L  +
Sbjct: 320 TGATSNYQYTTLKVHGL--SDVVSIAAGYYHSLALKKDGTIWAWGNNEYGQLGDGTLNYK 377

Query: 363 HTPTL 367
             P L
Sbjct: 378 KLPIL 382


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYCHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS++G 
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGE 157

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             +  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 158 -FFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 169/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++ EGE + WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKEGEFFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +       YN          GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 NWF----PYN----------GQC-----------PPDIDSEEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 SNPQNCGPPDDFR--CPDPSKQIWTVNETLIQKW 410



 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+ +G  F WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 96/212 (45%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+  E + WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L   G    +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 447

 Score =  124 bits (310), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 115/373 (30%), Positives = 167/373 (44%), Gaps = 57/373 (15%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           S +R I AG      L   G +  +G    G LG         P +V     + ++S  K
Sbjct: 70  SGVRQIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSIEPVQVAGLTGVKAISAGK 129

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG--------GLYGKRVTQV 327
                 L +  +G V++WG   +G+LG       + P   MG        GL G  V  +
Sbjct: 130 ---GFSLALKGDGSVWAWGSNTYGQLG-------KNPLSFMGSLTPIQVEGLEG--VVSI 177

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE-SHTLV 386
           S G SH  A+ E+G+L+ WGE  HG LG G  +S+  P +  ++ DV A   GE SH L 
Sbjct: 178 SCGGSHCFALQENGVLWAWGENSHGILGDGTNESQFKP-VKPKIKDVKAFDAGELSHALA 236

Query: 387 LSQDGHTVWSMGSGNLGKLGH-----EDTGKVT--------TPKVIEALRKFRVRKVCAG 433
           + +DG +VW+ G    G+LG       D G+++         P ++  +     + V AG
Sbjct: 237 VKEDG-SVWAWGFNYKGQLGTGGVSLSDQGRISLGREADNYNPDIVRGVSD--AKAVAAG 293

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLA 486
            S SVAL  DG V+ WG      LGL  +  S   +P  V G+    +  ++ G  H LA
Sbjct: 294 GSHSVALASDGSVWAWGSNSDGQLGLGHAGGSDVTSPTRVQGIEG--VTAIAAGMYHTLA 351

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGSLFSIAYTVPPS 545
           L     V+AWGSN+ GQ G  +FS        ++G       QI  A S  SI  T+ PS
Sbjct: 352 LKGDGSVWAWGSNSDGQLGNASFSAASSPVPILIG------PQIPTAASPTSITTTIQPS 405

Query: 546 NSALSSAFTPLCV 558
            +  ++    L V
Sbjct: 406 PTPQAAGANYLLV 418



 Score =  109 bits (273), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 44/308 (14%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N + ++ D        P   +  + ++ I AG+  +  L   G +  +G    G
Sbjct: 91  VWAWGSNSYGELGDGTNENSIEPVQVAGLTGVKAISAGKGFSLALKGDGSVWAWGSNTYG 150

Query: 250 -LANTTIQPLPKRVPLEA----AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            L    +  +    P++      +VS+S   C  +H   +   G +++WG   HG LG G
Sbjct: 151 QLGKNPLSFMGSLTPIQVEGLEGVVSIS---CGGSHCFALQENGVLWAWGENSHGILGDG 207

Query: 305 NTLSQ---RRPKLIMGGLYGKRVTQVSAGH-SHSAAVTEDGLLYTWG------------- 347
              SQ    +PK+       K V    AG  SH+ AV EDG ++ WG             
Sbjct: 208 TNESQFKPVKPKI-------KDVKAFDAGELSHALAVKEDGSVWAWGFNYKGQLGTGGVS 260

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK--L 405
             D GR+  G     + P +V  +SD  AV+ G SH++ L+ DG +VW+ GS + G+  L
Sbjct: 261 LSDQGRISLGREADNYNPDIVRGVSDAKAVAAGGSHSVALASDG-SVWAWGSNSDGQLGL 319

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS-SSI 458
           GH     VT+P  ++ +    V  + AG   ++AL  DG V+ WG      LG  S S+ 
Sbjct: 320 GHAGGSDVTSPTRVQGIEG--VTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAA 377

Query: 459 SFHTPVLV 466
           S   P+L+
Sbjct: 378 SSPVPILI 385



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 117/259 (45%), Gaps = 36/259 (13%)

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           L    V+++ S C+   +L    +G V+ WG     ++  G   S  +   I G      
Sbjct: 26  LSPQAVAIAASNCTSVALL---EDGSVWQWG-----RVCDGVEWSAPQRVDISG------ 71

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V Q++AG  H  A+  DG ++ WG   +G LG G  ++   P  V  L+ V A+S G+  
Sbjct: 72  VRQIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSIEPVQVAGLTGVKAISAGKGF 131

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKV--TTPKVIEALRKFRVRKVCAGTSFSVALT 441
           +L L  DG +VW+ GS   G+LG      +   TP  +E L    V  +  G S   AL 
Sbjct: 132 SLALKGDG-SVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEG--VVSISCGGSHCFALQ 188

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD----SHVLALSQYN 491
            +G+++ WG      LG  ++   F  PV        +I DV   D    SH LA+ +  
Sbjct: 189 ENGVLWAWGENSHGILGDGTNESQF-KPV------KPKIKDVKAFDAGELSHALAVKEDG 241

Query: 492 EVYAWGSNTMGQCGQDNFS 510
            V+AWG N  GQ G    S
Sbjct: 242 SVWAWGFNYKGQLGTGGVS 260



 Score = 85.1 bits (209), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 65/196 (33%), Positives = 94/196 (47%), Gaps = 20/196 (10%)

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA 376
            G    +   ++A +  S A+ EDG ++ W     GR+  G   S   P  V ++S V  
Sbjct: 23  AGALSPQAVAIAASNCTSVALLEDGSVWQW-----GRVCDGVEWS--APQRV-DISGVRQ 74

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           ++ G  H L L  DG TVW+ GS + G+LG         P  +  L    V+ + AG  F
Sbjct: 75  IAAGSGHVLALKGDG-TVWAWGSNSYGELGDGTNENSIEPVQVAGLTG--VKAISAGKGF 131

Query: 437 SVALTWDGLVFWWGLG----LRSSSISFH---TPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+AL  DG V+ WG      L  + +SF    TP+ V GL    +V +S G SH  AL +
Sbjct: 132 SLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEG--VVSISCGGSHCFALQE 189

Query: 490 YNEVYAWGSNTMGQCG 505
              ++AWG N+ G  G
Sbjct: 190 NGVLWAWGENSHGILG 205



 Score = 54.7 bits (130), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 430 VCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           + A    SVAL  DG V+ WG        S    V ++G+       ++ G  HVLAL  
Sbjct: 33  IAASNCTSVALLEDGSVWQWGRVCDGVEWSAPQRVDISGVRQ-----IAAGSGHVLALKG 87

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              V+AWGSN+ G+ G     N + +P +V GL    V+ I AG  FS+A
Sbjct: 88  DGTVWAWGSNSYGELGDGTNENSI-EPVQVAGLTG--VKAISAGKGFSLA 134


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  124 bits (310), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 91/270 (33%), Positives = 134/270 (49%), Gaps = 17/270 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           + +E  V +WG GE G+LG GN   ++    I+  L   +V  V AG  +S A+ +DG L
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNN-EEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKL 59

Query: 344 YTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSG 400
           +TWG    G LGH  + K+ + P+ V  L++V  V  + G  H L +   G   ++ G  
Sbjct: 60  FTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRA-YAWGGN 118

Query: 401 NLGKLGHE-----DTGKVTTPKVIEALR---KFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
             G+ G E     DTG+     ++   R   K  VR+V AG + SV LT +G V+ WG  
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQP 178

Query: 453 LRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
                I     PV V GL   ++  +++G  H LAL +   ++AWG+N  GQ G  + + 
Sbjct: 179 WPPGDIKQISVPVRVQGLERVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGTGD-TQ 235

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           P  QP  V GL  + +  I AG   S A T
Sbjct: 236 PRSQPITVQGLSGLTLVDIAAGGWHSTALT 265



 Score =  115 bits (287), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 93/308 (30%), Positives = 140/308 (45%), Gaps = 28/308 (9%)

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLA-NTTIQPLPKRVPLEAAIVSLSV 273
           P  +R + AG   +  +   G L  +G   +G LG    T  + +P +V    A V++  
Sbjct: 37  PYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVK-ALANVNIVQ 95

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGH--------GNTLSQRRPKLIMGGLYGKRVT 325
           +     H L V  +G  Y+WG  E+G+ G         G  L  RR  +I      K V 
Sbjct: 96  AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPL--RRDIVIPQRCASKLVV 153

Query: 326 -QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHT 384
            QV+AG +HS  +T +G +++WG+        GD+K    P  V  L  V  ++ G  H 
Sbjct: 154 RQVAAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISVPVRVQGLERVRLIAVGAFHN 209

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L L +DG T+W+ G+   G+LG  DT   + P  ++ L    +  + AG   S ALT DG
Sbjct: 210 LALQEDG-TLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDG 268

Query: 445 LVFWWGLGLR-------SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            V+ WG G         +   S   P  V  L    IV VS G +H +AL++   +Y +G
Sbjct: 269 EVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFG 328

Query: 498 SNTMGQCG 505
               G+ G
Sbjct: 329 RGDHGRLG 336



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 67/196 (34%), Positives = 94/196 (47%), Gaps = 21/196 (10%)

Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIV 269
           R+Q L   +R I  G F    L   G L  +G    G LG  +T  +  P  V   + + 
Sbjct: 192 RVQGL-ERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLT 250

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVS 328
            + ++     H   +T +GEVY WG GEHG+LG G N  S +     +  L G+ + QVS
Sbjct: 251 LVDIA-AGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVS 309

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV----------TELSDVGA-- 376
            G +HS A+T DG +YT+G GDHGRLG+G   +   P  V          T+  D G   
Sbjct: 310 CGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWI 369

Query: 377 ---VSCGESHTLVLSQ 389
              V+ G  HTL + +
Sbjct: 370 AKLVASGGRHTLAIVE 385


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 141/270 (52%), Gaps = 25/270 (9%)

Query: 254  TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
            T QP+   + L  AIVS++   C   H L  T +G VYSWG+G +G LG G+  ++  P 
Sbjct: 1115 TPQPVGLSIGLRNAIVSIA---CGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPV 1171

Query: 314  LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--EL 371
             ++       +++  AG  HS A+ ++G +++WG G +GRLG G  ++ +TP L+   + 
Sbjct: 1172 KVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDT 1231

Query: 372  SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT----PKVIEALRKFRV 427
             +V  +SCG+SH+  L + G TV++ G    GKLG    GK+ +    P V+E+L+   +
Sbjct: 1232 YEVFQISCGDSHSACLDRFG-TVYTWGCCRGGKLG---LGKIVSDVLEPAVVESLKGTHI 1287

Query: 428  RKVCAGTSFSVALTWDGLVFWWGL---------GLRSSSISFHTPVLVTGLSSHQIVDVS 478
             ++  GT  ++AL+  G ++ WG          GL S+      PV  TG  +   V ++
Sbjct: 1288 IQIACGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNIDYVPQPVPDTGFKN---VFIA 1344

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             G     A++ + ++  WG  T  + G  +
Sbjct: 1345 AGPYSCAAINIFGDLLTWGLGTGYRLGHGD 1374



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 164/381 (43%), Gaps = 75/381 (19%)

Query: 179  GDTDISVAHSKVYTWGCNLHHQILDEVRGKCS------RPRLQSLPSNIRHIEAGQFCTF 232
            G+T    A  K+Y WGC L      E  G  S      +P   +   N+  I AG +   
Sbjct: 1295 GNTLALSASGKIYQWGCTLGFNKQSE--GLISNIDYVPQPVPDTGFKNV-FIAAGPYSCA 1351

Query: 233  LLDSTGGLLVYGKG---WLGLANTTIQPLPKRV-------------------PLE----- 265
             ++  G LL +G G    LG  ++     PK V                   P+E     
Sbjct: 1352 AINIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNV 1411

Query: 266  -AAIVSLSVSK------CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ----RRPKL 314
             A   +    K        + H + +T  G VY+WGV  +   G+ +T  Q      P L
Sbjct: 1412 KAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGV--NNGTGYNSTKDQIESYSEPML 1469

Query: 315  IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-- 372
                 +  ++++++ G +HS A+T +GLL+TWG  D+G+LG GDL+SR  P  V  +   
Sbjct: 1470 F--NHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENC 1527

Query: 373  -------DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED--TGKVTTPKVIEALR 423
                   D     C  +H   +  D  T+W  GS + GKLG  +  T  V TP+ I  + 
Sbjct: 1528 INVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVT 1587

Query: 424  KFRVRKVCAGTSFSVALTWDGLVFWWGLGL-------RSSSISFHTPVLVTGLSSHQIVD 476
               V K+  GT  SV LT +G ++  G G         +S+    TPV     +  + VD
Sbjct: 1588 G--VYKLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPV----KTEVKFVD 1641

Query: 477  VSIGDSHVLALSQYNEVYAWG 497
            V  G SH LA+S  NE+Y WG
Sbjct: 1642 VCAGSSHSLAISVDNELYGWG 1662



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 37/286 (12%)

Query: 290  VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-------GL 342
            VYSWG      LG G  +S      I+    G+++ QV+ G  HSA +          G 
Sbjct: 1015 VYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGT 1074

Query: 343  LYTWGEGDHGRLG-HGDLKS------------------RHTPTLVTE----LSDVGAVSC 379
            ++T+G G+ GRLG H D  S                   HTP  V       + + +++C
Sbjct: 1075 VFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIAC 1134

Query: 380  GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSV 438
            G +HTLV + DG  V+S G G  G LG         P KV+       + K CAG+  S+
Sbjct: 1135 GANHTLVTTVDG-CVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSM 1193

Query: 439  ALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
            AL  +G V+ WG G        S+ +++TP L+    ++++  +S GDSH   L ++  V
Sbjct: 1194 ALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTV 1253

Query: 494  YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            Y WG    G+ G     + V +P+ V  L+   + QI  G+  ++A
Sbjct: 1254 YTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLA 1299



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 159/365 (43%), Gaps = 56/365 (15%)

Query: 210  SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGL------ANTTIQPLPKRVP 263
            SR ++ + PS+ R  + G   T        L VY  G +         + +    PK +P
Sbjct: 988  SRTKVTNPPSSSRRTKDGAKHT-----VSHLNVYSWGKVPFNCLGQGVDVSTSEYPKIIP 1042

Query: 264  LEAAIVSLSVSKCSEAH--VLTVTSE-----GEVYSWGVGEHGKLGH-----GNTLSQR- 310
              +      V+ C + H  VL  +S+     G V+++G+G  G+LG+      + LSQ+ 
Sbjct: 1043 FFSGRKIAQVA-CGDYHSAVLVSSSKQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQI 1101

Query: 311  ---------------RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
                           +P  +  GL    +  ++ G +H+   T DG +Y+WG G +G LG
Sbjct: 1102 GTEDKDEPSWCTHTPQPVGLSIGLRNA-IVSIACGANHTLVTTVDGCVYSWGMGAYGVLG 1160

Query: 356  HGDLKSRHTPTLVTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
             G + +R+ P  V   SD   +     G  H++ L ++G+ VWS G G  G+LG   T  
Sbjct: 1161 TGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGN-VWSWGYGGNGRLGLGSTRN 1219

Query: 413  VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              TP +I     + V ++  G S S  L   G V+ WG      LGL         P +V
Sbjct: 1220 YYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVV 1279

Query: 467  TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN--FSN--PVDQPSKVVGL 522
              L    I+ ++ G  + LALS   ++Y WG  T+G   Q     SN   V QP    G 
Sbjct: 1280 ESLKGTHIIQIACGTGNTLALSASGKIYQWGC-TLGFNKQSEGLISNIDYVPQPVPDTGF 1338

Query: 523  EDVCV 527
            ++V +
Sbjct: 1339 KNVFI 1343



 Score = 99.8 bits (247), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 151/327 (46%), Gaps = 36/327 (11%)

Query: 221  IRHIEAGQFCTFLLDSTGGLLVYG-KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CS 277
            I+ I  G     LL   G +  +G     G  +T  Q      P+     S  +SK  C 
Sbjct: 1424 IQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSSKISKIACG 1483

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
              H L +T  G +++WG  ++G+LG G+  S+  P  +    Y +    V AG  +S  +
Sbjct: 1484 SNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVP---YIENCINVFAGVDNSGCI 1540

Query: 338  T----ED------GLLYTWGEGDHGRLGHGDL--KSRHTPTLVTELSDVGAVSCGESHTL 385
                 ED      G L+ +G    G+LG G+    +  TP  +T ++ V  ++ G  H++
Sbjct: 1541 CSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTGVYKLALGTMHSV 1600

Query: 386  VLSQDGHTVWSMGSGNLGKLGHEDTGK--VTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            VL+ +G +++S G+G  G+LG  DT    V TP   E     +   VCAG+S S+A++ D
Sbjct: 1601 VLTHEG-SLYSAGAGTGGRLGTGDTSNYFVFTPVKTEV----KFVDVCAGSSHSLAISVD 1655

Query: 444  GLVFWWGLGLRSSSISFHT--PVLVTGLSS----HQIVDVSIGDSHVLALSQYNEVYAWG 497
              ++ WG G    S   H   P L+  + S     +++      +H L L+    V A+G
Sbjct: 1656 NELYGWGEGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFG 1715

Query: 498  SNTMGQCG-----QDNFSNPVDQPSKV 519
            +NT GQ G     + + +N +  PS V
Sbjct: 1716 NNTYGQLGVQLSIKSSANNFIKMPSTV 1742



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 152/376 (40%), Gaps = 59/376 (15%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSN---IRHIEAGQFCTFLLDSTGGLLVYG-- 244
            VY+WG   +  +          P     PS+   I    AG   +  LD  G +  +G  
Sbjct: 1148 VYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYG 1207

Query: 245  -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              G LGL +T     P  + +        +S C ++H   +   G VY+WG    GKLG 
Sbjct: 1208 GNGRLGLGSTRNYYTPNLIRIFDTYEVFQIS-CGDSHSACLDRFGTVYTWGCCRGGKLGL 1266

Query: 304  GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG------EGDHGRLGHG 357
            G  +S      ++  L G  + Q++ G  ++ A++  G +Y WG      +   G + + 
Sbjct: 1267 GKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNI 1326

Query: 358  DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV-WSMGSGNLGKLGHEDTGKVTTP 416
            D   +  P   T   +V  ++ G      ++  G  + W +G+G   +LGH D+     P
Sbjct: 1327 DYVPQPVPD--TGFKNV-FIAAGPYSCAAINIFGDLLTWGLGTGY--RLGHGDSKDHVAP 1381

Query: 417  KVIEALR--------------------------------KFRVRKVCAGTSFSVALTWDG 444
            K +  LR                                + R++++  G    V LT +G
Sbjct: 1382 KFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNG 1441

Query: 445  LVFWWGL----GLRSSSI---SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
             V+ WG+    G  S+     S+  P+L    SS +I  ++ G +H LA++    ++ WG
Sbjct: 1442 TVYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSS-KISKIACGSNHSLAITVNGLLFTWG 1500

Query: 498  SNTMGQCGQDNFSNPV 513
             N  GQ GQ +  + V
Sbjct: 1501 CNDNGQLGQGDLRSRV 1516



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 171/421 (40%), Gaps = 87/421 (20%)

Query: 190  VYTWGCNLHHQI-LDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
            VYTWGC    ++ L ++      P + +SL  ++I  I  G   T  L ++G +  +G  
Sbjct: 1253 VYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWGCT 1312

Query: 245  -------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                   +G +   +   QP+P     +   ++     C+  ++      G++ +WG+G 
Sbjct: 1313 LGFNKQSEGLISNIDYVPQPVPD-TGFKNVFIAAGPYSCAAINIF-----GDLLTWGLGT 1366

Query: 298  HGKLGHGNTLSQRRPKLI-----------MGGLYG--------------------KRVTQ 326
              +LGHG++     PK +           +  +Y                     KR+ Q
Sbjct: 1367 GYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQ 1426

Query: 327  VSAGHSHSAAVTEDGLLYTWG--EGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH 383
            ++ G  H   +T +G +YTWG   G         ++S   P L     S +  ++CG +H
Sbjct: 1427 IAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSSKISKIACGSNH 1486

Query: 384  TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            +L ++ +G  +++ G  + G+LG  D      P  +  +       V AG   S  +   
Sbjct: 1487 SLAITVNG-LLFTWGCNDNGQLGQGDLRSRVIPDHVPYIEN--CINVFAGVDNSGCICSS 1543

Query: 444  ----------GLVFWWG------LGLRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLA 486
                      G ++ +G      LGL  +  S   TP  +T ++   +  +++G  H + 
Sbjct: 1544 NHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTG--VYKLALGTMHSVV 1601

Query: 487  LSQYNEVYAWGSNTMGQCGQDNFSN-----PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            L+    +Y+ G+ T G+ G  + SN     PV    K V         +CAGS  S+A +
Sbjct: 1602 LTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTEVKFV--------DVCAGSSHSLAIS 1653

Query: 542  V 542
            V
Sbjct: 1654 V 1654



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 131/329 (39%), Gaps = 30/329 (9%)

Query: 143  LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCN---LHH 199
            L+ + D+    L D   + +    D     ++    G   +   +  VYTWG N    ++
Sbjct: 1396 LLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYN 1455

Query: 200  QILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQ 256
               D++             S I  I  G   +  +   G L  +G    G LG  +   +
Sbjct: 1456 STKDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSR 1515

Query: 257  PLPKRVP-LEAAI-----VSLSVSKCSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQ 309
             +P  VP +E  I     V  S   CS  H   +  + G ++ +G    GKLG G  L+ 
Sbjct: 1516 VIPDHVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTS 1575

Query: 310  R----RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
                 R    + G+Y     +++ G  HS  +T +G LY+ G G  GRLG GD  +    
Sbjct: 1576 TVMTPREITTVTGVY-----KLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVF 1630

Query: 366  TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL--- 422
            T V        V  G SH+L +S D + ++  G    GK    D   V  P ++E +   
Sbjct: 1631 TPVKTEVKFVDVCAGSSHSLAISVD-NELYGWGE---GKYICSDEKHVLEPTLMEVIPSP 1686

Query: 423  -RKFRVRKVCAGTSFSVALTWDGLVFWWG 450
              + +V    A  + S+ LT  G V  +G
Sbjct: 1687 TGEAKVISAVAAGNHSLVLTNSGYVAAFG 1715


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  124 bits (310), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P++    A      V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRKSDFFANKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  VS G +H+ A+ + G +Y+WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEY 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCKKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEEYIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +       YN          GQC QD            +  ED  CV++I +G   S ++
Sbjct: 344 NWF----SYN----------GQCPQD------------IDSEDCFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P +   +  F   C D     +T+    ++++
Sbjct: 378 YSNPQSCGPADDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+          K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFAN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTV-WSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEEYIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG   +G+LG G       L+ R +     +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 21/248 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDSTGG 239
            +VY+WG +   Q+     G         +P NI+         +  G + +  L     
Sbjct: 103 GQVYSWGLDSDGQL-----GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASE 157

Query: 240 LLVYGK---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +  +G+   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG 
Sbjct: 158 VFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAA-GGAHSFVLTLSGAIFGWGR 216

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            + G+LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LG
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 356 HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           H        P  V EL  S V  V+CG  HT         ++S G G  G+LG   T   
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNR 335

Query: 414 TTPKVIEA 421
            +P  ++ 
Sbjct: 336 KSPFTVKG 343


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  124 bits (310), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAS 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (251), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.4 bits (228), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 47.4 bits (111), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 YGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  124 bits (310), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 147/280 (52%), Gaps = 17/280 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH       +P+ I G L  + +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHER--EGNKPEQI-GALADQHIIHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 125/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++ +G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.8 bits (112), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  123 bits (309), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  123 bits (309), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 17/238 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDG 341
           +T++G+VY+ G   HG+LGHG+T+ +  PK++    GL    V QV+AG S++ AVT+DG
Sbjct: 223 LTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGL--APVVQVAAGASYTFAVTDDG 280

Query: 342 LLYTWGEGDHGRLGHGD----LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
            +Y++G   +  LGHGD    L+ R   +       V  VS G+ H + L   G+ V++ 
Sbjct: 281 TVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGY-VYTW 339

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL- 453
           G G  G LGH D    T+P++I +L+     +VCA    +  LT +G VF   W G G  
Sbjct: 340 GRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSL 399

Query: 454 ----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
               R SS     P ++  L  H +  +S G  H +A++    V+ +G N   Q GQ+
Sbjct: 400 GFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQE 457



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 14/240 (5%)

Query: 222 RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           + +  G   T +L + G +   G    G LG  +T  +  PK V L   +  +       
Sbjct: 211 KQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGA 270

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSA 335
           ++   VT +G VYS+G   +  LGHG+   + RP+ I    + +R   V +VSAG  H+ 
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQS--FKRRNIHVVRVSAGDEHAV 328

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH-TLVLSQDGHT 393
           A+   G +YTWG G  G LGHGD   + +P L++ L S V    C     T VL+ +G +
Sbjct: 329 ALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEG-S 387

Query: 394 VWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           V++ G    G LG  D G   KV  P+V+++LR   V ++  G   +VA+T  G+VF +G
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFG 447



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 137/310 (44%), Gaps = 17/310 (5%)

Query: 246 GWLGLANTTIQPLP-KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G LG    T Q     RVP  +    +++S  S  H   VT  GEV++ G       GHG
Sbjct: 132 GVLGHGPDTTQCAAFSRVPFPSLSRVVNISA-SHNHAAFVTELGEVFTCGDNSSLCCGHG 190

Query: 305 NT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               +  RP  I   L G    QV+ G S +  +T DG +YT G   HG+LGHGD   R 
Sbjct: 191 EVGRTIFRPTEIKA-LKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRA 249

Query: 364 TPTLV---TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           TP +V     L+ V  V+ G S+T  ++ DG TV+S GS     LGH D      P+ I+
Sbjct: 250 TPKIVELFEGLAPVVQVAAGASYTFAVTDDG-TVYSFGSCTNFCLGHGDQHDELRPRAIQ 308

Query: 421 AL--RKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQ 473
           +   R   V +V AG   +VAL   G V+ WG G              +P L++ L S  
Sbjct: 309 SFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQV 368

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQIC 531
            V V         L+    V+A+G    G  G      S+ V +P  +  L D  V QI 
Sbjct: 369 AVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQIS 428

Query: 532 AGSLFSIAYT 541
            G   ++A T
Sbjct: 429 TGLYHTVAVT 438



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 45/293 (15%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-----RRPKLIMGGLYGKRVTQVSAGHSHS 334
           H L V  +  VYS G    G LGHG   +Q     R P   +      RV  +SA H+H+
Sbjct: 114 HTLLV-HDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSL-----SRVVNISASHNHA 167

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDVGA--VSCGESHTLVLSQDG 391
           A VTE G ++T G+      GHG++ ++   PT +  L  +    V+ G S T++L+ DG
Sbjct: 168 AFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDG 227

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWG 450
             V++ GS   G+LGH DT    TPK++E       V +V AG S++ A+T DG V+ +G
Sbjct: 228 Q-VYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFG 286

Query: 451 LGLRSSSISF-------HTPVLVTGLSSHQ-----IVDVSIGDSHVLALSQYNEVYAWGS 498
                S  +F       H  +    + S +     +V VS GD H +AL     VY WG 
Sbjct: 287 -----SCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGR 341

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA-----------GSLFSIAY 540
              G  G  +  N    P  +  L+     Q+CA           GS+F+  +
Sbjct: 342 GYCGALGHGD-ENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGW 393



 Score = 53.9 bits (128), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)

Query: 190 VYTWG-----CNLHHQILDEVRGKCSRPR-LQSLPSNIRHI---EAGQFCTFLLDSTGGL 240
           VY++G     C  H    DE+R     PR +QS      H+    AG      LD+ G +
Sbjct: 282 VYSFGSCTNFCLGHGDQHDELR-----PRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336

Query: 241 LVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G+G+   LG  +   +  P+ +    + V++ V    +     +T EG V+++G   
Sbjct: 337 YTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCA-RKRKTFVLTDEGSVFAFGWMG 395

Query: 298 HGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G LG    G++    RP+ ++  L    V+Q+S G  H+ AVT  G+++ +G+ +  +L
Sbjct: 396 FGSLGFPDRGSSDKVMRPR-VLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQL 454

Query: 355 GHGDLKSRHTPT 366
           G   ++    PT
Sbjct: 455 GQEYIRGCLKPT 466


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  123 bits (309), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 124/241 (51%), Gaps = 25/241 (10%)

Query: 288  GEVYSWGVGEHGKLGH-----GNTLSQR----RPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            G ++SWG    G++G+      N LS++     PKLI+  L    VT V+ G+ HS A+T
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVP-LKDTIVTSVACGYQHSVAIT 1558

Query: 339  EDGLLYTWGEGDHGRLGHGDLK--SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
              G +  WG+  H +LG G+    S   PT +  L+++ +VSCG  HTL L   G  V+S
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQ-VFS 1617

Query: 397  MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
             G+G  G LGH +     +PK+IEAL+   V  +  G   S+ LT +  V+ WG      
Sbjct: 1618 WGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQ 1677

Query: 451  LGLRSSSIS-----FHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
            LG+     +       TP  V G L    ++ ++ G++H LAL+   +VY WG N  GQ 
Sbjct: 1678 LGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQI 1737

Query: 505  G 505
            G
Sbjct: 1738 G 1738



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 175/442 (39%), Gaps = 62/442 (14%)

Query: 149  DNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSK-----VYTWGCNLHHQILD 203
            D   P   R  S +   I S  +  +   I + D S    K     +++WG N   Q+  
Sbjct: 1457 DQATPKSQRIESKNKGYIQSNQSGNIV-QILEKDYSTFSKKDAVGVMFSWGQNTEGQM-- 1513

Query: 204  EVRGKCSRPRLQSLPSNIR----------------HIEAGQFCTFLLDSTGGLLVYGKG- 246
               G    P+   L   I+                 +  G   +  +   G +L +G   
Sbjct: 1514 ---GNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITYAGTVLAWGDNS 1570

Query: 247  --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
               LGL   +   +P   P+ A     SVS C   H L +   G+V+SWG GE G LGHG
Sbjct: 1571 HSQLGLGEKSPSSVPFPTPIPALTNIQSVS-CGSEHTLALDYIGQVFSWGNGEGGLLGHG 1629

Query: 305  NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRH 363
            N      PK+I   L G  V  +  G  HS  +T++  +Y+WG  + G+LG    L +  
Sbjct: 1630 NEDVCPSPKII-EALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNE 1688

Query: 364  TPTLVT------ELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGK 412
               L T       L  VG   ++ GE+H+L L+ +G  V+  G    G++G     DT  
Sbjct: 1689 KCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQ-VYGWGYNMNGQIGLGMQTDTYP 1747

Query: 413  VTTPKVIEALRKFRVRKVCAGTSFSVAL------------TWDGLVFWWGLGLRSSSISF 460
            V  P++I  L K   +  C G + S  L            T + L  +     + +    
Sbjct: 1748 VYEPQLIPKLNKIE-KIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDV 1806

Query: 461  HTPVLVTGLSSHQIVDVSIGDSHVLAL----SQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
              P  +       ++ VS G +H LAL    +++  ++AWG +  GQ G          P
Sbjct: 1807 FIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVP 1866

Query: 517  SKVVGLEDVCVRQICAGSLFSI 538
              +  L+DV    +  GS  S+
Sbjct: 1867 RPITYLQDVTTYSMACGSYHSL 1888



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 32/231 (13%)

Query: 189  KVYTWGCNLHHQI-LDE---VRGKCSRPRLQSLPSNIR-----HIEAGQFCTFLLDSTGG 239
            +VY+WG N   Q+ +D+      KC     + +  N+       I AG+  +  L   G 
Sbjct: 1666 QVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQ 1725

Query: 240  LLVYG---KGWLGLA-NTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +  +G    G +GL   T   P+  P+ +P    I  +     ++++ L +  E E    
Sbjct: 1726 VYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLGL--EKEPIKI 1783

Query: 294  GVGEHGKLGHGNTLSQRR-------PKLIMGGLYGKRVTQVSAGHSHSAAV----TEDGL 342
                +  L       Q+R       PK  M   +   V  VS GH+HS A+    T+  +
Sbjct: 1784 TSTTNNILDQYKPQDQKRAVTDVFIPKK-MDCFHQIPVLHVSCGHNHSLALVVADTKHYM 1842

Query: 343  LYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDVG--AVSCGESHTLVLSQD 390
            L+ WG   HG+LG G+  ++   P  +T L DV   +++CG  H+LV++ D
Sbjct: 1843 LFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVAND 1893


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  123 bits (309), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 68  HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q   
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQAAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 29/319 (9%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIV------SLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G+  L    I P  + V  E  +       S+    C   H + +  +GEVY+ G    G
Sbjct: 5   GYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKG 64

Query: 300 KLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +LGH   GN   Q      +G L  + +  V+ G SHS A+++ G L++WG G  G+LG 
Sbjct: 65  QLGHEREGNKPEQ------IGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118

Query: 357 GDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGK 412
              + S   P L+ +L+   +  VSCG  H L L+ DG   ++ G  + G+LG  ++   
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ-FFTWGRNSHGQLGLGKEFPS 177

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
             +P+ + +L    + +V AG + S AL+  G VF WG      LGL S      +P  V
Sbjct: 178 QASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGL-SDEKDRESPCHV 236

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             L + ++V +S G+ H   L++   V+ +G+ + GQ G D+ ++ V+ P +V+ L    
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN-PRRVLELMGSE 295

Query: 527 VRQICAGSLFSIAYTVPPS 545
           V QI  G   ++A+ VP S
Sbjct: 296 VTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++ +G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG   HG+LG G +  S+ +P  V  L  +    V  G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADEHIVHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG     +S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 15/224 (6%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G  HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G  ++S G+G+ G+LG  
Sbjct: 63  KGQLGHE--REGNKPEQIGALADEHIVHVACGESHSLALSDRGQ-LFSWGAGSDGQLGLM 119

Query: 409 DTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
            T + V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S  
Sbjct: 120 TTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG  H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGDHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 185 VAHSKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLL 241
            A  + +TWG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G + 
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 242 VYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G    G LGL++   +  P  V L  A   + +S C E H   +T  G V+++G G  
Sbjct: 213 GWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSC 271

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHG 357
           G+LGH +   +  P+ ++  L G  VTQ++ G  H+ A V   GL+Y +G G  G+LG G
Sbjct: 272 GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330

Query: 358 DLKSRHTPTLV 368
              +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  123 bits (309), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 161/330 (48%), Gaps = 34/330 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG  L  ++   V    S P+    L + N+  +  G++ +  +  +G L ++G
Sbjct: 289 QGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWG 348

Query: 245 K-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG  +   Q +P+++  PLE   VS SVS C   H   VTS G+++++G G 
Sbjct: 349 GNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVS-SVS-CGPWHTAVVTSAGQLFTFGDGT 406

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+  S   P+ +   L G R  +V+ G  H+AAV E             G L+T
Sbjct: 407 FGVLGHGDRSSVSTPREVE-SLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFT 465

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+GD GRLGHGD ++R  PT V  L +     V+CG S T+ L+  G  V++MGS   G
Sbjct: 466 WGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVALTTSGQ-VYTMGSPVYG 524

Query: 404 KLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSS 457
           +LG+ +  GKV T +V   L K  V ++  G      LT    V+ WG G         +
Sbjct: 525 QLGNPQADGKVPT-RVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 583

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              + P +V  L   Q+  +  G S   A+
Sbjct: 584 DDRNFPSIVEALKDKQVKGIICGTSFTAAI 613



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 133/284 (46%), Gaps = 21/284 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E     VT  G++Y WG   +  G LG G+  +Q  P+ + G L G  V+ VS G  H
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWH 389

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD  S  TP  V  L  +    V+CG  HT  + +  
Sbjct: 390 TAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHTAAVVEVM 449

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+ G+LGH D      P  +  L +    +V  G S +VAL
Sbjct: 450 VGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVAL 509

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G L  + + +++ G  HV  L+   EVY 
Sbjct: 510 TTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYT 569

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           WG    G+ G  + ++  + PS V  L+D  V+ I  G+ F+ A
Sbjct: 570 WGKGANGRLGHGD-TDDRNFPSIVEALKDKQVKGIICGTSFTAA 612



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 126/281 (44%), Gaps = 27/281 (9%)

Query: 264 LEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           LE+A++  +    C   H   VT +GEV+SWG    G+LGHG       PK +  GL   
Sbjct: 265 LESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFV-DGLKNF 323

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLVT---ELSDVGAV 377
            V  V+ G   S AVT  G LY WG    + G LG G   ++  P  ++   E   V +V
Sbjct: 324 NVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVSSV 383

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           SCG  HT V++  G  +++ G G  G LGH D   V+TP+ +E+L+  R  +V  G   +
Sbjct: 384 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWHT 442

Query: 438 VALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIG 480
            A+               G +F WG G +         +   P  V  L       V+ G
Sbjct: 443 AAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACG 502

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            S  +AL+   +VY  GS   GQ G       V  P++V G
Sbjct: 503 HSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV--PTRVEG 541


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 TSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 180/411 (43%), Gaps = 27/411 (6%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDIS----VAHSKVYTWGCNLHHQIL 202
             +    LGD  ++  +T    +  P     I   D      ++   V+ WG N   Q+ 
Sbjct: 334 GGNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLG 393

Query: 203 DEVRGKCSRPR-LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPL 258
           D      S P  +  LPS +  I AG   T  L S+GG+  +G    G LG  + T    
Sbjct: 394 DGTTTARSTPAAVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSST 453

Query: 259 PKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           P  V  L + + +++       H   +TS G V+ WG    G+LG G+T+    P  + G
Sbjct: 454 PVAVSGLASGVETIAAGG---WHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSG 510

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGA 376
                 VT ++AG  H+ A+T  G ++ WG    G+LG G    R TP  V+ L S V  
Sbjct: 511 --LPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTV 568

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           ++ G  HT  L+  G  VW  G+   G+LG   T   TTP  +  L    V  + AG   
Sbjct: 569 IAAGRFHTCALTSSGG-VWCWGANFDGQLGDGTTTNRTTPVAVSGLPS-GVTAIAAGGWH 626

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           + ALT  G V+ WG      LG   ++ +  TP  V+GL S  +  ++ G  H  AL+  
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLG-DGTTTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSS 684

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            EV+ WG N  GQ G    +N    P  V GL    V  I AG   + A T
Sbjct: 685 GEVWCWGDNYYGQLGDGTTTNR-STPGAVSGLPSG-VTAIAAGVYHTCALT 733



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 165/365 (45%), Gaps = 24/365 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
             V  WG N   Q+ D      S P  +  LPS +  I AG + T  L  +GG+  +G  
Sbjct: 72  GGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTAIAAGNYHTCALTGSGGVRCWGAN 131

Query: 245 -KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG   T  +  P  V  L + + +++       H   + S G V  WG   +G+LG
Sbjct: 132 YSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGG---DHTCALMSSGGVMCWGDNYYGQLG 188

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-S 361
            G T ++R P  + G      VT ++AG  H+ A+T  G ++ WG   +G+LG G    S
Sbjct: 189 DGTTTNRRTPVAVSG--LPSGVTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYS 246

Query: 362 RHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           R TP  V  L S + A++ G  HT  L   G  VW  G  + G+LG       +TP  + 
Sbjct: 247 RSTPAAVGGLPSGMTAIAAGGLHTCALMSSGG-VWCWGRNDSGQLGDGSDTDSSTPVAVS 305

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  + AG   + ALT  G V+ WG      LG   ++ +  TP  V+GL S  +
Sbjct: 306 GLPS-GVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLG-DGTTTARSTPAAVSGLPS-GV 362

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             ++ GD H  AL     V+ WG N  GQ G D  +     P+ V GL    V  I AG 
Sbjct: 363 ETIAAGDYHTCALMSSGGVWCWGRNNSGQLG-DGTTTARSTPAAVSGLPSG-VTAIAAGG 420

Query: 535 LFSIA 539
           L + A
Sbjct: 421 LHTCA 425



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 171/415 (41%), Gaps = 69/415 (16%)

Query: 188 SKVYTWGCNLHHQILDEVR-GKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V  WG N   Q+ + +  G+ +   +  LPS +  I AG   T  L S+GG++ +G  
Sbjct: 123 GGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDN 182

Query: 246 --GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG   TT +  P  V  L + + +++       H   +T  GEV+ WG   +G+LG
Sbjct: 183 YYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGG---LHTCALTGSGEVWCWGYNYYGQLG 239

Query: 303 HGNTLSQRRPKLIMGGL-------------------------YGKR-------------- 323
            G T   R     +GGL                         +G+               
Sbjct: 240 DGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSS 299

Query: 324 -----------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL- 371
                      VT ++AG  H+ A+T  G ++ WG    G+LG G   +R TP  V+ L 
Sbjct: 300 TPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLP 359

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           S V  ++ G+ HT  L   G  VW  G  N G+LG   T   +TP  +  L    V  + 
Sbjct: 360 SGVETIAAGDYHTCALMSSGG-VWCWGRNNSGQLGDGTTTARSTPAAVSGLPS-GVTAIA 417

Query: 432 AGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           AG   + AL   G V+ WGL         S     TPV V+GL+S  +  ++ G  H  A
Sbjct: 418 AGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCA 476

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           L+    V+ WG N  GQ G  +    +  P  V GL    V  I AG   + A T
Sbjct: 477 LTSSGGVWCWGRNNSGQLGDGSTIYHI-TPVAVSGLPSG-VTAIAAGDYHTCALT 529



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 124/268 (46%), Gaps = 11/268 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
             V+ WG N   Q+ D        P  +  LPS +  I AG + T  L  +GG+  +G  
Sbjct: 481 GGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYN 540

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             G LG   TT +  P  V +      ++V      H   +TS G V+ WG    G+LG 
Sbjct: 541 LSGQLGDGTTTDRSTP--VAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGD 598

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T ++  P  + G      VT ++AG  H+ A+T  G ++ WG+  +G+LG G   +R 
Sbjct: 599 GTTTNRTTPVAVSG--LPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRS 656

Query: 364 TPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           TP  V+ L S V A++ G  HT  L+  G  VW  G    G+LG   T   +TP  +  L
Sbjct: 657 TPGAVSGLPSGVTAIAAGWEHTCALTSSGE-VWCWGDNYYGQLGDGTTTNRSTPGAVSGL 715

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG 450
               V  + AG   + ALT  G V  WG
Sbjct: 716 PS-GVTAIAAGVYHTCALTGSGGVMCWG 742



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 121/271 (44%), Gaps = 16/271 (5%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           AH   +T  G V  WG  + G+LG G   ++  P  + G      VT ++AG+ H+ A+T
Sbjct: 63  AHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSG--LPSGVTAIAAGNYHTCALT 120

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVL-SQDGHTVWS 396
             G +  WG    G+LG+G    R TP  V+ L S V A++ G  HT  L S  G   W 
Sbjct: 121 GSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCW- 179

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
            G    G+LG   T    TP  +  L    V  + AG   + ALT  G V+ WG      
Sbjct: 180 -GDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQ 237

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           LG  +++ S  TP  V GL S  +  ++ G  H  AL     V+ WG N  GQ G D   
Sbjct: 238 LGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLG-DGSD 295

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                P  V GL    V  I AG   + A T
Sbjct: 296 TDSSTPVAVSGLPSG-VTAIAAGDYHTCALT 325



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 12/225 (5%)

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCG 380
           + VT ++AG +H+ A+T  G +  WG  D G+LG G   +R TP  V+ L S V A++ G
Sbjct: 53  QGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTAIAAG 112

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             HT  L+  G  V   G+   G+LG+  T   +TP  +  L    V  + AG   + AL
Sbjct: 113 NYHTCALTGSGG-VRCWGANYSGQLGNGLTFGRSTPGAVSGLPS-GVTAIAAGGDHTCAL 170

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
              G V  WG      LG   ++ +  TPV V+GL S  +  ++ G  H  AL+   EV+
Sbjct: 171 MSSGGVMCWGDNYYGQLG-DGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVW 228

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            WG N  GQ G    +     P+ V GL    +  I AG L + A
Sbjct: 229 CWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG-MTAIAAGGLHTCA 272



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V+ WG N   Q+ D      + P  +  LPS +  I AG + T  L S+G +  +G  
Sbjct: 583 GGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDN 642

Query: 246 --GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG   TT +  P  V  L + + +++       H   +TS GEV+ WG   +G+LG
Sbjct: 643 YYGQLGDGTTTNRSTPGAVSGLPSGVTAIAAG---WEHTCALTSSGEVWCWGDNYYGQLG 699

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T ++  P  + G      VT ++AG  H+ A+T  G +  WG    G+LG G    R
Sbjct: 700 DGTTTNRSTPGAVSG--LPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYR 757

Query: 363 HTP 365
            TP
Sbjct: 758 TTP 760


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 45  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 98

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 99  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 158

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 159 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 217

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 218 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 276

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 277 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 317



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 95  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 153

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 154 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 213

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 214 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 272

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 273 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 332

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 333 TGHTCN-VKCPSPVKG 347



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 8   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 66

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 67  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 124

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 125 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 182

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 183 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 227



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 29  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 85

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 86  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 145

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 146 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 205

Query: 537 SIAYTV 542
           S A ++
Sbjct: 206 SFALSL 211



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 124 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 183

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 184 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 243

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 244 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 301

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 302 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 345



 Score = 47.4 bits (111), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 215 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 274

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 275 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 333

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 334 GHTCNVKCPSPVK-GYWAAHSGQLSA 358


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHSAA-VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 147/280 (52%), Gaps = 17/280 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH       +P+ I G L  + +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHER--EGNKPEQI-GALADQHIVHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NNAGQLGL-SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341



 Score = 46.2 bits (108), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 125/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT +G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 46.6 bits (109), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L   GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G   +L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTSLQGIVAEPQ-VCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRTVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 131/233 (56%), Gaps = 13/233 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           +LT+T+ G+VY+ G   +G LG G+  S   PK+I   L  K + Q++ G   H  AVT+
Sbjct: 35  LLTLTN-GDVYALGFNGNGCLGVGDGSSTLEPKIIEQ-LCQKDIVQLAYGMGPHVLAVTD 92

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            G LY+WG G +G+LGH   + +  P LV     V  V+CG  H++ L++DG  V++ GS
Sbjct: 93  SGELYSWGHGGYGQLGHTS-EEKSKPVLVYMQKKVIQVACGSYHSIALTEDGE-VYAWGS 150

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
            N G+LG   +    TPK +  +   ++  V  G SF+V LT DG ++ WG      LG+
Sbjct: 151 NNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGI 210

Query: 454 RSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +++     PV VTG L    I  +  G +HVL L+   E+Y+WG+N+ GQ G
Sbjct: 211 ENNTNQLQ-PVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLG 262



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 143/267 (53%), Gaps = 21/267 (7%)

Query: 244 GKGWLGLAN--TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           G G LG+ +  +T++P       +  IV L+       HVL VT  GE+YSWG G +G+L
Sbjct: 50  GNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGM--GPHVLAVTDSGELYSWGHGGYGQL 107

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           GH  +  + +P L+      K+V QV+ G  HS A+TEDG +Y WG  + G+LG G   +
Sbjct: 108 GH-TSEEKSKPVLVY---MQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNN 163

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
           + TP  V+ +    + +VSCG+S T++L+ DG  ++S G    G+LG E +T ++   +V
Sbjct: 164 QATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGE-LYSWGYNGNGQLGIENNTNQLQPVRV 222

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
             +L    + K+  G +  + LT  G ++ WG      LGL ++  +   P L+   +  
Sbjct: 223 TGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTH-NTSVPTLINTTTDD 281

Query: 473 QIVDVSIGD-SHVLA-LSQYNEVYAWG 497
           +  D++    +H+ A ++   ++Y WG
Sbjct: 282 RWSDIAAHHYNHISAGVTISGKIYMWG 308



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 19/248 (7%)

Query: 143 LVTLADDNIKPLG-DRKSSNSNTDIDSTSTPK------------LTYNIGDTDISVAHS- 188
           L+TL + ++  LG +        D  ST  PK            L Y +G   ++V  S 
Sbjct: 35  LLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTDSG 94

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           ++Y+WG   + Q L     + S+P L  +   +  +  G + +  L   G +  +G    
Sbjct: 95  ELYSWGHGGYGQ-LGHTSEEKSKPVLVYMQKKVIQVACGSYHSIALTEDGEVYAWGSNNC 153

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LGL  +  Q  PKRV L  +   +SVS C ++  + +T++GE+YSWG   +G+LG  N
Sbjct: 154 GQLGLGISNNQATPKRVSLIPSKKIVSVS-CGQSFTVMLTTDGELYSWGYNGNGQLGIEN 212

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
             +Q +P  + G L+GK + ++  G +H   +T+ G LY+WG   +G+LG G   +   P
Sbjct: 213 NTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVP 272

Query: 366 TLVTELSD 373
           TL+   +D
Sbjct: 273 TLINTTTD 280



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 14/204 (6%)

Query: 327 VSAGHSHSAAVT-EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESH 383
           V  G  + A +T  +G +Y  G   +G LG GD  S   P ++ +L   D+  ++ G   
Sbjct: 26  VFGGAGNEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGP 85

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            ++   D   ++S G G  G+LGH  T +  +  V+  ++K +V +V  G+  S+ALT D
Sbjct: 86  HVLAVTDSGELYSWGHGGYGQLGH--TSEEKSKPVLVYMQK-KVIQVACGSYHSIALTED 142

Query: 444 GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           G V+ WG      LGL  S+ +  TP  V+ + S +IV VS G S  + L+   E+Y+WG
Sbjct: 143 GEVYAWGSNNCGQLGLGISN-NQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWG 201

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVG 521
            N  GQ G +N +N + QP +V G
Sbjct: 202 YNGNGQLGIENNTNQL-QPVRVTG 224


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 149/315 (47%), Gaps = 19/315 (6%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           +R I  G   T  L + G +   G   +  LG    T +PL   +P     V ++++ C 
Sbjct: 38  LRQIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPL--LIPELQNYVVVAIA-CG 94

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             H + +T  G+V SWG  + G+LG     S      I+  L  K V Q++ G++HS A+
Sbjct: 95  SRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLAL 154

Query: 338 TEDGLLYTWGEGDHGRLG---HGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           T  G LY+WG   +G+LG     +L   + P  +T L  +    ++CG +H+ ++S+   
Sbjct: 155 TSCGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSS- 213

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V+  G  N G+LG  D      P  ++ LR   VR V  G  FSV LT +G VF  G G
Sbjct: 214 AVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG 273

Query: 453 L-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQ 506
                   S+ +   P +V  L    I  V+ G+ H LAL      VY +G  + GQ G 
Sbjct: 274 TYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGN 333

Query: 507 DNFSNPVDQPSKVVG 521
            + +N V  P +V+G
Sbjct: 334 RS-TNSVTLPQEVLG 347



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 20/267 (7%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK---RVTQVSAGHSHSAAVTEDGLLYT 345
           +++ WG   HG+LG G    ++   LI   +  K    + Q++ GH H+  +T +G +Y 
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQ--ILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYA 59

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
            G  D  +LGH     R  P L+ EL +  V A++CG  H++ L++ G  V S G  + G
Sbjct: 60  CGNNDQAQLGHNLPTKR--PLLIPELQNYVVVAIACGSRHSMALTEWGQ-VLSWGDNDCG 116

Query: 404 KLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           +LG   D   +  PK+I +L    V ++  G + S+ALT  G ++ WG      LG++  
Sbjct: 117 QLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPP 176

Query: 457 SISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
               H   P+ +T L    +  ++ G +H   +S+ + V+ +G N  GQ G ++ SN   
Sbjct: 177 QELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRA- 235

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            P+++  L  + VR +  G  FS+  T
Sbjct: 236 YPTQLKTLRTLGVRFVACGDEFSVFLT 262



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 11/189 (5%)

Query: 189 KVYTWGCNLHHQI---LDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           ++Y+WG N++ Q+     +    C+ P RL +L    +  I  G   +FL+  +  +  +
Sbjct: 159 ELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGF 218

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G+   G LGL + + +  P ++      + +    C +   + +T+EG V++ G G +G+
Sbjct: 219 GRNNCGQLGLNDESNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDL 359
           LGHG+  ++  P+++M  L G  +TQV+ G+ H+ A V   G +Y +G G  G+LG+   
Sbjct: 278 LGHGSNTNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRST 336

Query: 360 KSRHTPTLV 368
            S   P  V
Sbjct: 337 NSVTLPQEV 345


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (275), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.4 bits (111), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|294816129|ref|ZP_06774772.1| RCC1 repeat domain protein [Streptomyces clavuligerus ATCC 27064]
 gi|326444464|ref|ZP_08219198.1| regulator of chromosome condensation-like protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328728|gb|EFG10371.1| RCC1 repeat domain protein [Streptomyces clavuligerus ATCC 27064]
          Length = 410

 Score =  123 bits (308), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 87/253 (34%), Positives = 131/253 (51%), Gaps = 34/253 (13%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPK----LIMGGLY-------------GKRVTQVSAGHS 332
           V +WG    G+LG+G+T++Q+ P     L+  G+              G +V   S G  
Sbjct: 40  VEAWGTNGSGQLGNGSTVAQQTPAPVLALVRDGIRELAGGGGEVATGDGVQVDGPSLGRP 99

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
            + A+ E+G +  WG  D G+LG+G    +  P +V  LS +  ++ G  H L +   G 
Sbjct: 100 FAVALMENGTVQAWGGNDKGQLGNGTTTDQGFPAMVAGLSGISEIAAGGDHALAVH--GG 157

Query: 393 TVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V S G    G+LG    T    TP V+++L   RV+ V AG +FSVAL  DG ++ WG 
Sbjct: 158 RVMSWGGNGKGQLGAGAATDPTKTPVVVQSLT--RVKDVGAGCAFSVALGQDGTLWSWGA 215

Query: 451 -----LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                LGL +++++ H TP  V G+S   I  +++G  HVLAL+   +V AWG NT GQ 
Sbjct: 216 GAKGQLGLGAANLTDHNTPQQVKGVSD--IAAIAVGCEHVLALTSTGKVKAWGGNTNGQL 273

Query: 505 GQDNFSN---PVD 514
           G +  ++   PVD
Sbjct: 274 GNNTTTDSGEPVD 286



 Score =  108 bits (270), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 91/288 (31%), Positives = 131/288 (45%), Gaps = 25/288 (8%)

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           KG LG   TT Q  P  V   A +  +S       H L V   G V SWG    G+LG G
Sbjct: 118 KGQLGNGTTTDQGFPAMV---AGLSGISEIAAGGDHALAVHG-GRVMSWGGNGKGQLGAG 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSR 362
                 +  +++  L   RV  V AG + S A+ +DG L++WG G  G+LG G  +L   
Sbjct: 174 AATDPTKTPVVVQSL--TRVKDVGAGCAFSVALGQDGTLWSWGAGAKGQLGLGAANLTDH 231

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE---DTGKVTTPKVI 419
           +TP  V  +SD+ A++ G  H L L+  G  V + G    G+LG+    D+G+    + +
Sbjct: 232 NTPQQVKGVSDIAAIAVGCEHVLALTSTG-KVKAWGGNTNGQLGNNTTTDSGEPVDVQFV 290

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQI 474
           +A     V  + A    S A   DG V+ WG   +      + ++  TPV +  LS    
Sbjct: 291 DA-----VTSLYATAYGSFATLSDGTVWAWGANTKGQLGDGTLLNRTTPVPIETLSG--A 343

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           V ++ G  H +A      V AWG N  GQ G D  +    +P  V  L
Sbjct: 344 VHIAGGSDHTVAARDNGSVTAWGDNAKGQLG-DGTTTSAPKPGTVTTL 390



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 119/254 (46%), Gaps = 21/254 (8%)

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPR-----LQSLPSNIRHIEAGQFCTFL 233
           GD  ++V   +V +WG N   Q+     G  + P      +QSL + ++ + AG   +  
Sbjct: 148 GDHALAVHGGRVMSWGGNGKGQL---GAGAATDPTKTPVVVQSL-TRVKDVGAGCAFSVA 203

Query: 234 LDSTGGLLVYG---KGWLGL--ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
           L   G L  +G   KG LGL  AN T    P++V   + I +++V  C   HVL +TS G
Sbjct: 204 LGQDGTLWSWGAGAKGQLGLGAANLTDHNTPQQVKGVSDIAAIAVG-CE--HVLALTSTG 260

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           +V +WG   +G+LG+  T     P  +    +   VT + A    S A   DG ++ WG 
Sbjct: 261 KVKAWGGNTNGQLGNNTTTDSGEPVDVQ---FVDAVTSLYATAYGSFATLSDGTVWAWGA 317

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
              G+LG G L +R TP  +  LS    ++ G  HT V ++D  +V + G    G+LG  
Sbjct: 318 NTKGQLGDGTLLNRTTPVPIETLSGAVHIAGGSDHT-VAARDNGSVTAWGDNAKGQLGDG 376

Query: 409 DTGKVTTPKVIEAL 422
            T     P  +  L
Sbjct: 377 TTTSAPKPGTVTTL 390



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 82/200 (41%), Gaps = 45/200 (22%)

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG    G+LG+G   ++ TP  V                L L +DG  +  +  G  G++
Sbjct: 43  WGTNGSGQLGNGSTVAQQTPAPV----------------LALVRDG--IRELAGGG-GEV 83

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
              D  +V  P +              G  F+VAL  +G V  WG      LG   ++  
Sbjct: 84  ATGDGVQVDGPSL--------------GRPFAVALMENGTVQAWGGNDKGQLG-NGTTTD 128

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              P +V GLS   I +++ G  H LA+     V +WG N  GQ G    ++P   P  V
Sbjct: 129 QGFPAMVAGLSG--ISEIAAGGDHALAV-HGGRVMSWGGNGKGQLGAGAATDPTKTPVVV 185

Query: 520 VGLEDVCVRQICAGSLFSIA 539
             L    V+ + AG  FS+A
Sbjct: 186 QSLTR--VKDVGAGCAFSVA 203


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 147/280 (52%), Gaps = 17/280 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH       +P+ I G L  + +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGH--VREGNKPEQI-GALADQHIIHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  110 bits (274), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH  ++  + P  +  L+D  +  V+CGESH+L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGH--VREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED+  V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S 
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGH   G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHVREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 47.4 bits (111), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 YGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 153/353 (43%), Gaps = 57/353 (16%)

Query: 210 SRPRLQSLPSN---IRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVP 263
           SRP     P +   I  +  G      +     L  +G G    LG         P+ + 
Sbjct: 277 SRPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLI 336

Query: 264 LEAAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           +E    +  +    C + H + +T + ++ +WG G+ G+LGHG+      PK I   L  
Sbjct: 337 IEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYD-LSK 395

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
           K+   +SAG SHSAA++E   LYTWG G +GRLGHG   S   P L+ +L   ++  VSC
Sbjct: 396 KKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSC 455

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGKVTTPKVIEALR------------K 424
           G  HTL ++  G TV++ G G  GKLG    +  G  + P+ I   +            K
Sbjct: 456 GAFHTLAITGQG-TVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDK 514

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL---GL--RSSSISFHTPVLVTGLS--------- 470
                  AG + S+ L   G ++ WG    GL  R      H P+ +  +          
Sbjct: 515 NEAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPN 574

Query: 471 ----------------SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                           S++++ V+ G  + ++L+   EVY +GSN  GQ  +D
Sbjct: 575 IDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKD 627



 Score =  107 bits (268), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 17/229 (7%)

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT-LVT 369
           RP  I    + K +TQV+ G +H  A+TED  L++WG G +G LG G       P  L+ 
Sbjct: 278 RPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLII 337

Query: 370 ELSD----VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
           E  D    +  ++CG+ H++ L++    + + G G  G+LGH D   V  PK I  L K 
Sbjct: 338 EKKDYTYFIEGIACGKYHSMCLTRK-KKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKK 396

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIG 480
           +   + AG S S A++    ++ WG G           S   P L+  L  ++I+ VS G
Sbjct: 397 KPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCG 456

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDN------FSNPVDQPSKVVGLE 523
             H LA++    VYA+G    G+ G +       FS P       VG+E
Sbjct: 457 AFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVE 505



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 186/455 (40%), Gaps = 91/455 (20%)

Query: 172 PKLTYNIGDTDISVAH-------SKVYTWGCNLHHQILDEVRGKCSRPR-----LQSLPS 219
           PK T  I       AH       S++++WG   +  +    R     PR      +    
Sbjct: 285 PKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTY 344

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
            I  I  G++ +  L     +L +G+G    LG  +     +PK +   +    + +S  
Sbjct: 345 FIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFIS-A 403

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
            E+H   ++ +  +Y+WG G +G+LGHG   S+++PKLI   L    +  VS G  H+ A
Sbjct: 404 GESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIED-LDQYEIIHVSCGAFHTLA 462

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRH------------------TPTLVTELSDVGAVS 378
           +T  G +Y +G+G +G+LG  + K R                      LV + ++    +
Sbjct: 463 ITGQGTVYAFGQGKYGKLGI-NRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAA 521

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHE---------DTGKV------TTPKVIEALR 423
            G +H+L L++ G  ++S G    G LG +         + G++        P + E ++
Sbjct: 522 AGYNHSLCLAKSG-KIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQ 580

Query: 424 K----------FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH------ 461
           +          + V +V  G   +V+LT  G V+ +G      L       +F       
Sbjct: 581 RGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQD 640

Query: 462 -----------------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                            + +   G ++ +I  ++ G  H+ A+S+ NE++ WG N  GQ 
Sbjct: 641 QNNNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQL 700

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G    S+   +P+ +  +    ++ I  G  +S A
Sbjct: 701 GLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAA 735



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           V ++   C   H+  ++   E++ WG  + G+LG G          ++  +  K +  ++
Sbjct: 668 VRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIA 727

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH---TPTLVTELSDVGAVSCGESHTL 385
            G ++SAAV+  G L+  G  ++G+LG G    +    + TL+  L+ + +V+CG +H L
Sbjct: 728 CGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHML 787

Query: 386 VLS--------QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
            ++        +DG   +S G    G+LG         PK I   ++ R +KV  G  FS
Sbjct: 788 AIADYNPDHPIKDG-MCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKE-RFKKVACGQDFS 845

Query: 438 VALTWDGLVFWWGLG--LRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           + LT+   V+ WG       S I+     P L+  L   QI D++        L+   E+
Sbjct: 846 IGLTYGNQVYLWGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLNDKGEI 905

Query: 494 YAWGS 498
             WGS
Sbjct: 906 LIWGS 910



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 18/198 (9%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPR-LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           Y+WG N   Q+    +   + P+ + +     + +  GQ   F +  T G  VY   W  
Sbjct: 804 YSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFKKVACGQ--DFSIGLTYGNQVYL--WGN 859

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
                   + K V +   + +L  ++     CS      +  +GE+  WG     ++   
Sbjct: 860 NKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQN 919

Query: 305 NTLSQRRPKLIMGGLYGKR-----VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
               ++    +    +  R     +  +SAG +HSAAV+    LYTWG  + GRLG  + 
Sbjct: 920 QKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLGLNEK 979

Query: 360 KSRHT---PTLVTELSDV 374
           + ++    P LV  + D+
Sbjct: 980 EYKNAKIEPILVQSIHDI 997


>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
 gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
          Length = 338

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 159/327 (48%), Gaps = 28/327 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           ++ WG N + Q+ D  +      R   +P     ++  I AG   +F + S G    +G 
Sbjct: 1   MWAWGANSNAQLGDGTK----TDRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGS 56

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   T  +  P +V    ++V+L   +   +H L V ++G V++WG   +G+LG
Sbjct: 57  NLFGQLGDGTTYDRLTPVQVQGLHSVVAL---EAGSSHSLAVKADGSVWAWGWNTYGQLG 113

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T S+  P  +  GL    V  V+AG  HS AV  DG ++ WG    G+LG G     
Sbjct: 114 DGTTDSRSTPVQVE-GL--DSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTES 170

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P  VT L  V +VS G + +  L  DG TVW+ G+ + G+LG E T    +P  ++  
Sbjct: 171 TVPVQVTGLGSVVSVSAGNTFSSALKSDG-TVWAWGANDSGQLGSE-TAASNSPSPVQVT 228

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
                  + +G+ +S+AL  DG V+ WG      LG   ++ S   PV VT L S  +V 
Sbjct: 229 GMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLG-NGTTTSSSAPVQVTRLGS--VVS 285

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           V+ G  H LA+     V+ WG+NT GQ
Sbjct: 286 VAAGPLHGLAVQSGGTVWDWGNNTYGQ 312



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 132/267 (49%), Gaps = 17/267 (6%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           A    V S+G  ++WG    G+LG G T  +  P  + G L+   V  + AG SHS AV 
Sbjct: 40  AASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQG-LH--SVVALEAGSSHSLAVK 96

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG ++ WG   +G+LG G   SR TP  V  L  V AV+ G  H+L +  DG +VW+ G
Sbjct: 97  ADGSVWAWGWNTYGQLGDGTTDSRSTPVQVEGLDSVVAVAAGSGHSLAVKADG-SVWAWG 155

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           +   G+LG     + T P  +  L    V  V AG +FS AL  DG V+ WG      LG
Sbjct: 156 ANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSSALKSDGTVWAWGANDSGQLG 213

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
             +++ +  +PV VTG++S   +       + LAL     V+AWG N+ GQ G +  +  
Sbjct: 214 SETAASNSPSPVQVTGMASAAAISSGS--DYSLALKNDGTVWAWGYNSSGQLG-NGTTTS 270

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
              P +V  L  V    + AG L  +A
Sbjct: 271 SSAPVQVTRLGSVV--SVAAGPLHGLA 295



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 120/238 (50%), Gaps = 13/238 (5%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           +++WG   + +LG G T + R   + +  L    V  +SAG + S AV  DG  + WG  
Sbjct: 1   MWAWGANSNAQLGDG-TKTDRYSPIPVKNL--DSVIGISAGGAASFAVRSDGTAWAWGSN 57

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
             G+LG G    R TP  V  L  V A+  G SH+L +  DG +VW+ G    G+LG   
Sbjct: 58  LFGQLGDGTTYDRLTPVQVQGLHSVVALEAGSSHSLAVKADG-SVWAWGWNTYGQLGDGT 116

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PV 464
           T   +TP  +E L    V  V AG+  S+A+  DG V+ WG      L   + +  T PV
Sbjct: 117 TDSRSTPVQVEGLDS--VVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPV 174

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            VTGL S  +V VS G++   AL     V+AWG+N  GQ G +  ++    P +V G+
Sbjct: 175 QVTGLGS--VVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGM 230



 Score = 78.6 bits (192), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 11/224 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A   V+ WG N + Q+ D      S P +++ L S +  + AG   +  + + G +  +G
Sbjct: 97  ADGSVWAWGWNTYGQLGDGTTDSRSTPVQVEGLDS-VVAVAAGSGHSLAVKADGSVWAWG 155

Query: 245 KGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             W   LG    T   +P +V    ++VS+S      +    + S+G V++WG  + G+L
Sbjct: 156 ANWSGQLGDGTYTESTVPVQVTGLGSVVSVSAGNTFSS---ALKSDGTVWAWGANDSGQL 212

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G     S     + + G+       +S+G  +S A+  DG ++ WG    G+LG+G   S
Sbjct: 213 GSETAASNSPSPVQVTGM--ASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTS 270

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              P  VT L  V +V+ G  H L + Q G TVW  G+   G+L
Sbjct: 271 SSAPVQVTRLGSVVSVAAGPLHGLAV-QSGGTVWDWGNNTYGQL 313


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 167/372 (44%), Gaps = 27/372 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  I  G     L    G +  +G+   G LG    T    PK V   +  +   +S C
Sbjct: 258 DVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFIS-C 316

Query: 277 SEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   +++ G++++WG G +  G LG+    S   PK + G L G +V  V+ G  HS
Sbjct: 317 GEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHS 376

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQD-- 390
           A +T  G LYT+G+G  G LGHG+ +S   P  V  L+      V+CG  H+  + +   
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAIVEATV 436

Query: 391 -------GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
                     +++ G G+  +LG  D      P  ++AL +    ++  G + +VAL   
Sbjct: 437 QTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATS 496

Query: 444 GLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIV-DVSIGDSHVLALSQYNEVYAWGS 498
           G V+  G      L +       P LV    +H++V ++S G +HV  L+  +EVY WG 
Sbjct: 497 GHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSRSEVYTWGM 556

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCV 558
              G+ G  +  N    P+ V  L+D  V+ I  GS F+    +   +  +S A   +C 
Sbjct: 557 GANGRLGHGDL-NDKKAPTIVEALKDRHVKSISCGSNFTTCICI---HKWVSGADQSVCT 612

Query: 559 DVRPHTFTLIRE 570
             R   F   R+
Sbjct: 613 GCR-QAFGFTRK 623



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 19/178 (10%)

Query: 181 TDISVAHSKVYTWG---CNLHHQILDEVR--GKCSRPRLQSLPSNIRHIEAGQFCTFLLD 235
           T +++   K+YTWG    N   Q   E R    C +  L+    N   +  GQ  T  L 
Sbjct: 438 TGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLE---HNFHQLACGQNMTVALA 494

Query: 236 STGGLLVYG---KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
           ++G +   G    G LG   +   QP   +  L   +V   +S C  AHV  +TS  EVY
Sbjct: 495 TSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVE-EIS-CGAAHVAVLTSRSEVY 552

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           +WG+G +G+LGHG+ L+ ++   I+  L  + V  +S G + +  +     ++ W  G
Sbjct: 553 TWGMGANGRLGHGD-LNDKKAPTIVEALKDRHVKSISCGSNFTTCI----CIHKWVSG 605


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 167/393 (42%), Gaps = 44/393 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                   C     S  +   G ++ +GLG            L TG +S++    ++  +
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                      YA+     GQC  D     +D        E  CV++I +G   S ++  
Sbjct: 345 W----------YAYN----GQCLPD-----IDSE------EYFCVKRIFSGGDQSFSHYS 379

Query: 543 PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
            P N      F   C D     +T+    ++++
Sbjct: 380 SPQNCGPPDDFR--CPDPTKQIWTVNEALIQKW 410



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KR+  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 168/368 (45%), Gaps = 31/368 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG-- 244
             V  WG N   Q+ D    + S P  +  L S +  I AG   T  + + GG+  +G  
Sbjct: 279 GGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVN 338

Query: 245 -KGWLGLANTTIQPLPKRV----PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
               LG   TT Q  P  V       AAI +       + H   +T+ G V  WG    G
Sbjct: 339 QYSQLGDGTTTQQSTPVVVNGLSSRAAAIAA------GDGHTCAMTTGGGVSCWGRNWSG 392

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG G T  +R P  + G      V  ++AG SH+ A++ +G +  WG  + G+LG G  
Sbjct: 393 QLGDGTTTQRRTPMQVEG--LSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTT 450

Query: 360 KSRHTPTLVTELS-DVGAVSCGESHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPK 417
             R TP  V  LS  V A++ G+SHT  LS +G  T W  G    G+LG+  T + +TP 
Sbjct: 451 IQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCW--GGNGSGQLGNGTTTQRSTPV 508

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS 471
            +E L    V  + AG S + ALT  G V  WG      LG   ++   + PV V GLSS
Sbjct: 509 QVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLG-DGTTTQRNMPVNVVGLSS 566

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
             +  ++ G SH  ALS    V  WG NT  Q G    +N  + P +V GL    V  I 
Sbjct: 567 G-VAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNH-NTPVQVEGLSSG-VAAIA 623

Query: 532 AGSLFSIA 539
           AG   + A
Sbjct: 624 AGYAHTCA 631



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 172/367 (46%), Gaps = 25/367 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V  WG N + Q+ D    + S P ++  L S +  I AG   T  L + G +  +G+ 
Sbjct: 177 GAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCALTTGGAVTCWGRN 236

Query: 246 --GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG   TT +  P  V  L + + +++     + +   +T+ G V  WG    G+LG
Sbjct: 237 GNGQLGDGTTTQRSTPVNVLGLSSEVAAITAG---DVYTCALTTGGGVTCWGANWSGQLG 293

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T  +  P  ++G      VT ++AG+ H+ A+T  G +  WG   + +LG G    +
Sbjct: 294 DGTTDERSTPVDVVG--LSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQ 351

Query: 363 HTPTLVTELSD-VGAVSCGESHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            TP +V  LS    A++ G+ HT  ++  G  + W  G    G+LG   T +  TP  +E
Sbjct: 352 STPVVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCW--GRNWSGQLGDGTTTQRRTPMQVE 409

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  + AG S + AL+ +G V  WG      LG   ++I   TPV V GLSS  +
Sbjct: 410 GLSS-GVADITAGDSHTCALSTEGGVTCWGNNESGQLG-DGTTIQRSTPVQVEGLSSG-V 466

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           V ++ GDSH  ALS    V  WG N  GQ G +  +     P +V GL    V  I AG 
Sbjct: 467 VAITAGDSHTCALSTEGGVTCWGGNGSGQLG-NGTTTQRSTPVQVEGLSSG-VMAITAGD 524

Query: 535 LFSIAYT 541
             + A T
Sbjct: 525 SHTCALT 531



 Score =  110 bits (275), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 170/381 (44%), Gaps = 30/381 (7%)

Query: 154 LGDRKSSNSNTDID----STSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKC 209
           LGD  ++  +T +     S+    +    G T        V  WG N   Q+ D    + 
Sbjct: 343 LGDGTTTQQSTPVVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQR 402

Query: 210 SRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PL 264
             P +++ L S +  I AG   T  L + GG+  +G    G LG   T  +  P +V  L
Sbjct: 403 RTPMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEGL 462

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
            + +V+++     ++H   +++EG V  WG    G+LG+G T  +  P  + G      V
Sbjct: 463 SSGVVAITAG---DSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEG--LSSGV 517

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH 383
             ++AG SH+ A+T  G +  WG   +G+LG G    R+ P  V  L S V A++ G SH
Sbjct: 518 MAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAAIAAGGSH 577

Query: 384 TLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           T  LS +G  T W  G     +LG        TP  +E L    V  + AG + + AL  
Sbjct: 578 TCALSTEGGVTCW--GWNTYDQLGDGTRTNHNTPVQVEGLSS-GVAAIAAGYAHTCALIT 634

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G V  WG      LG   ++    TPV+V GLSS ++  +  G +H  ALS    V  W
Sbjct: 635 SGEVTCWGWNWYGQLG-DGTTTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCW 692

Query: 497 GSNTMGQCGQDNFSN---PVD 514
           G N   Q G    S    P+D
Sbjct: 693 GWNKYYQLGNGTISQRSIPMD 713



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 163/343 (47%), Gaps = 24/343 (6%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
              V  WG N   Q+ D    + S P +++ L S +  I AG   T  L + GG+  +G 
Sbjct: 431 EGGVTCWGNNESGQLGDGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGG 490

Query: 245 --KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G LG   TT +  P +V  L + +++++     ++H   +T+ G V  WG   +G+L
Sbjct: 491 NGSGQLGNGTTTQRSTPVQVEGLSSGVMAITAG---DSHTCALTTGGGVTCWGGNWYGQL 547

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +  P  ++G      V  ++AG SH+ A++ +G +  WG   + +LG G   +
Sbjct: 548 GDGTTTQRNMPVNVVG--LSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN 605

Query: 362 RHTPTLVTELS-DVGAVSCGESHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            +TP  V  LS  V A++ G +HT  L   G  T W  G    G+LG   T +  TP V+
Sbjct: 606 HNTPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCW--GWNWYGQLGDGTTTQRMTPVVV 663

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQI 474
             L    V  + AG + + AL+  G V  WG      L + +IS  + P+ V GLSS  +
Sbjct: 664 NGLSS-EVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQRSIPMDVDGLSSG-V 721

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS---NPVD 514
             ++ GD+H   LS    V  WG +  GQ G    +    PVD
Sbjct: 722 AALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVD 764



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 145/311 (46%), Gaps = 21/311 (6%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEA 279
           I AG   T  L +   ++ +G    G LG   T  +  P  V  L + +V+++      A
Sbjct: 61  IAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVAVNGLSSGVVAIAAGY---A 117

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H   +T+ G V  WG  E G+LG+G T+ +R P  + G      V  ++AG  H+ A+T 
Sbjct: 118 HTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAG--LSSGVAAIAAGEYHTCALTT 175

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGH-TVWSM 397
           DG +  WG   +G+LG G    R TP  V  L S V A++ G SHT  L+  G  T W  
Sbjct: 176 DGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGVTAITAGGSHTCALTTGGAVTCWGR 235

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR--- 454
            +GN G+LG   T + +TP  +  L    V  + AG  ++ ALT  G V  WG       
Sbjct: 236 -NGN-GQLGDGTTTQRSTPVNVLGLSS-EVAAITAGDVYTCALTTGGGVTCWGANWSGQL 292

Query: 455 --SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
              ++    TPV V GLSS  +  ++ G+ H  A++    V  WG N   Q G D  +  
Sbjct: 293 GDGTTDERSTPVDVVGLSSG-VTAIAAGNDHTCAITTGGGVSCWGVNQYSQLG-DGTTTQ 350

Query: 513 VDQPSKVVGLE 523
              P  V GL 
Sbjct: 351 QSTPVVVNGLS 361



 Score = 84.0 bits (206), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 111/225 (49%), Gaps = 15/225 (6%)

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH 383
           T ++AG +++ A+T +  +  WG  + G+LG G    R+TP  V  L S V A++ G +H
Sbjct: 59  TPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVAVNGLSSGVVAIAAGYAH 118

Query: 384 TLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           T  L+  G  + W  G+   G+LG+  T +  TP  +  L    V  + AG   + ALT 
Sbjct: 119 TCALTTSGGVSCW--GNNESGQLGNGITIQRRTPVQVAGLSS-GVAAIAAGEYHTCALTT 175

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           DG V  WG      LG   ++    TPV V GLSS  +  ++ G SH  AL+    V  W
Sbjct: 176 DGAVTCWGSNGYGQLG-DGTTTQRSTPVQVAGLSSG-VTAITAGGSHTCALTTGGAVTCW 233

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           G N  GQ G D  +     P  V+GL    V  I AG +++ A T
Sbjct: 234 GRNGNGQLG-DGTTTQRSTPVNVLGLSSE-VAAITAGDVYTCALT 276



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
              V  WG N + Q+ D  R   + P +++ L S +  I AG   T  L ++G +  +G 
Sbjct: 584 EGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGW 643

Query: 246 GW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            W   LG   TT +  P  V   ++ V+  V+    AH   +++ G V  WG  ++ +LG
Sbjct: 644 NWYGQLGDGTTTQRMTPVVVNGLSSEVAAIVAG--YAHTCALSTGGGVTCWGWNKYYQLG 701

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           +G T+SQR   + + GL    V  ++AG +H+  ++  G +  WG   +G+LG G +  R
Sbjct: 702 NG-TISQRSIPMDVDGLS-SGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYR 759

Query: 363 HTPTLVTEL 371
            TP  VT L
Sbjct: 760 TTPVDVTVL 768


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 154/345 (44%), Gaps = 31/345 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVPLEAAIVSLSVSKC 276
           ++ +I  G     L+   G +  +G+G  G     I      PK V     +   +V+ C
Sbjct: 305 DVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVA-C 363

Query: 277 SEAHVLTVTSEGEVYSWG--VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   +T  GEVY+WG  V     L  G T SQ  P+ + G L G  ++ V+ G  H+
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL----- 387
           A V+  G L+T+G+G  G LGHGDL+S  +P  V  L+   V + +CG  HT  +     
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEVMF 483

Query: 388 -----SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                +     +++ G G+ G+LGH D G    P  +  L  +   +V  G   +VALT 
Sbjct: 484 DRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTN 543

Query: 443 DGLVFWWG---LGLRSSSISFHTPVLVTGLSSHQIVDV-SIGDSHVLALSQYNEVYAWGS 498
            G VF  G    G   +  +    V+V G    + V V S G  HV  L+    VY WG 
Sbjct: 544 MGKVFAMGSAKYGQLGNPHARDKVVIVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGR 603

Query: 499 NTMGQCG----QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +GQ G    +D ++     P  V  L D  V  I  G  F+ A
Sbjct: 604 GEIGQLGLGDTEDRYT-----PCFVEALRDRQVNTITCGPSFTAA 643



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 141/327 (43%), Gaps = 77/327 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+ WG     ++  ++    S P++  SL   +++ +  G++ T  L  +G +  +G
Sbjct: 322 QGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWG 381

Query: 245 KG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                   L    T  Q +P+R+  PL+   +S+S   C E H   V+S G ++++G G 
Sbjct: 382 NDVCCADLLNEGRTRSQWIPQRLGGPLDG--ISISSVACGEWHTAIVSSCGRLFTYGDGT 439

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYTW 346
            G LGHG+  S   PK +   L G RV   + G  H+AA+ E            G L+TW
Sbjct: 440 FGVLGHGDLRSYSSPKEVES-LNGLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTW 498

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSD--------------------------------- 373
           G+GD GRLGH D  ++  PT VT+L D                                 
Sbjct: 499 GDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQL 558

Query: 374 --------------------VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
                               V  +S G  H  VL+  G +V++ G G +G+LG  DT   
Sbjct: 559 GNPHARDKVVIVEGQLKQEFVKVISTGSYHVAVLTSAG-SVYTWGRGEIGQLGLGDTEDR 617

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVAL 440
            TP  +EALR  +V  +  G SF+ A+
Sbjct: 618 YTPCFVEALRDRQVNTITCGPSFTAAI 644



 Score = 46.2 bits (108), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           PK++E+     V  +  G   +  +T  G VF WG G      +   +   +P +V  L+
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
              +  V+ G+ H  AL+   EVY WG++
Sbjct: 355 GLHVKTVACGEYHTCALTDSGEVYTWGND 383


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 128/238 (53%), Gaps = 14/238 (5%)

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS--RHTPTLVTELSD 373
           M  ++ K + + + G SH+  +T DG +Y+ G  DHG+LGH D++S     P L+T L +
Sbjct: 341 MDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGH-DVESLPNKRPQLLTALEN 399

Query: 374 --VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKV 430
             +    CG +H+L L+  G  V+S GS  +G+LG E DT +   P++I ++   +V ++
Sbjct: 400 YIITQACCGTAHSLALTNWGQ-VYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQI 458

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
            AG    +ALT  G ++ WG      LGL  ++    TP LV  L+   I  ++ G +H 
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHS 518

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            A+S+   ++ WG NT GQ G ++  N    P+++  L  + VR +  G  FS+  T 
Sbjct: 519 FAVSKSGAIFGWGKNTFGQLGLNDL-NSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTA 575



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 15/281 (5%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSA 329
           ++ + C  +H L +T++G++YS G  +HG+LGH   +L  +RP+L+   L    +TQ   
Sbjct: 349 IARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLT-ALENYIITQACC 407

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELS--DVGAVSCGESHTLV 386
           G +HS A+T  G +Y+WG    G+LG     +R   P L+  ++   V  ++ G  H L 
Sbjct: 408 GTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLA 467

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
           L+  G  +++ GS   G+LG   T  KV+TP ++++L    +  +  G + S A++  G 
Sbjct: 468 LTNSGE-LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGA 526

Query: 446 VFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           +F WG      LGL   + S   P  +  L S  +  VS GD   + L+    V+  G+ 
Sbjct: 527 IFGWGKNTFGQLGLNDLN-SRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAG 585

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           T GQ G  + +N +  P  V  L    + QI  G   ++A+
Sbjct: 586 TFGQLGHGSCNNEI-LPRMVFELMGSKITQIACGRRHTLAF 625



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 155/313 (49%), Gaps = 17/313 (5%)

Query: 189 KVYTWGCNLHHQILDEVRG-KCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGK 245
           K+Y+ G N H Q+  +V      RP+L +   N  I     G   +  L + G +  +G 
Sbjct: 367 KMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGS 426

Query: 246 GWLGL----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             +G      +TT Q +P+ +   AA   + ++     H L +T+ GE+Y+WG   +G+L
Sbjct: 427 NAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIA-AGHYHCLALTNSGELYAWGSNAYGQL 485

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T  +     ++  L G  +  ++ G +HS AV++ G ++ WG+   G+LG  DL S
Sbjct: 486 GLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNS 545

Query: 362 RHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           R  PT +  L  +G   VSCG+  ++ L+  G  V++ G+G  G+LGH        P+++
Sbjct: 546 RQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGG-GVFTCGAGTFGQLGHGSCNNEILPRMV 604

Query: 420 EALRKFRVRKVCAGTSFSVALTWD-GLVFWWGL-GLRSSSI----SFHTPVLVTGLSSHQ 473
             L   ++ ++  G   ++A     G ++ +GL G+    I    +++TP +V G    Q
Sbjct: 605 FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGPWQSQ 664

Query: 474 IVDVSIGDSHVLA 486
           I+  S+  S  LA
Sbjct: 665 ILTFSVQMSEELA 677



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
           V  P+ ++ +    + +   G S ++ LT DG ++  G      LG    S+    P L+
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           T L ++ I     G +H LAL+ + +VY+WGSN +GQ GQ+  +     P  +  +    
Sbjct: 395 TALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQ 454

Query: 527 VRQICAGSLFSIAYT 541
           V QI AG    +A T
Sbjct: 455 VVQIAAGHYHCLALT 469


>gi|146185478|ref|XP_001031903.2| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|146143053|gb|EAR84240.2| Kinesin motor domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 1349

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 168/364 (46%), Gaps = 66/364 (18%)

Query: 237  TGGLLVYGKGWLG-LANTTIQ----PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
            TG L ++GKG  G L N++      P+   +P    IV +    C   H + ++S G+VY
Sbjct: 982  TGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVV---CGWQHSMALSSSGQVY 1038

Query: 292  SWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
            SWG+GE G+LGH +  +   PK+I       K++  +S GHSHSAA++E+G LYTWG   
Sbjct: 1039 SWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDLYTWGCNY 1098

Query: 351  HGRLGHGDLKSRHTPTL----------------VTELSDVGAVSCGESHTLVLSQDGHTV 394
              RL   + K+++ P L                +++  +V  VS G +HT V++ DG +V
Sbjct: 1099 DYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSLGVNHTAVITVDG-SV 1157

Query: 395  WSMGSGNLGKLG------------------HEDTGKVTTP-----KVIEALRKFRVRKVC 431
            ++ G GN G+LG                   +++  V        KV     + +   + 
Sbjct: 1158 YTAGLGNHGELGIILNESVPNTDIIRDIVCQQNSNNVEERCCYLHKVQTFGEENKAIDIA 1217

Query: 432  AGTSFSVALTWDGLVFWWG---------LGLRSSSISF-------HTPVLVTGLSSHQIV 475
             G  F++ L  +G V+ +G         +G +     +        TP ++    + ++ 
Sbjct: 1218 CGYEFTIVLNAEGTVYQFGKKISQGPDFIGTKQEIQDYVTKDSQNVTPQIMYEFGNIRVQ 1277

Query: 476  DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV-GLEDVCVRQICAGS 534
             ++ G +H+  +++  E+Y WG N   +    +  +  ++P K+  G+ ++   Q+  G 
Sbjct: 1278 QIAAGKNHIAIITENGELYTWGKNFYDKLDMGDDKHESNKPVKLFEGINNLQCIQVSCGE 1337

Query: 535  LFSI 538
              S+
Sbjct: 1338 FHSV 1341



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 50/261 (19%)

Query: 290  VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL------- 342
             ++WG G+ G+LG G    +  P +    L  ++   +S G+ H+A +TE G+       
Sbjct: 914  TFAWGSGKDGRLGLGTDRGESNPTM----LNSQQFIYLSCGYYHTAGITEKGIYNQYYLQ 969

Query: 343  ---------------LYTWGEGDHGRLGHGDLKSRHTPTL--VTELSDVGAVSCGESHTL 385
                           LY WG+G+ G+LG+    S   P L  + +   +  V CG  H++
Sbjct: 970  TDKVKNILYFIQTGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSM 1029

Query: 386  VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL--RKFRVRKVCAGTSFSVALTWD 443
             LS  G  V+S G G  G+LGH D   + TPK+IE    +  +++ +  G S S A++ +
Sbjct: 1030 ALSSSGQ-VYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEE 1088

Query: 444  GLVFWWGLG-----LRSSSISFHTPVLV-----------TGLSSHQIVD---VSIGDSHV 484
            G ++ WG       + + + + + PVL            +G    Q  +   VS+G +H 
Sbjct: 1089 GDLYTWGCNYDYRLMINENKNQYKPVLTQLHYLKEIYQKSGQDISQKFNVQLVSLGVNHT 1148

Query: 485  LALSQYNEVYAWGSNTMGQCG 505
              ++    VY  G    G+ G
Sbjct: 1149 AVITVDGSVYTAGLGNHGELG 1169



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 24/193 (12%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGL-YGKRVTQVSAGHSHSAAVT 338
            ++L     GE+Y WG G  G+LG+ +  S + P  I+  +     + QV  G  HS A++
Sbjct: 975  NILYFIQTGELYLWGKGNSGQLGNSSFNSSKVP--ILANIPQTIPIVQVVCGWQHSMALS 1032

Query: 339  EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS----DVGAVSCGESHTLVLSQDGHTV 394
              G +Y+WG G+ G+LGH D+++ +TP ++   S     +  +SCG SH+  +S++G  +
Sbjct: 1033 SSGQVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEG-DL 1091

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEAL---------------RKFRVRKVCAGTSFSVA 439
            ++ G     +L   +      P V+  L               +KF V+ V  G + +  
Sbjct: 1092 YTWGCNYDYRLMINENKNQYKP-VLTQLHYLKEIYQKSGQDISQKFNVQLVSLGVNHTAV 1150

Query: 440  LTWDGLVFWWGLG 452
            +T DG V+  GLG
Sbjct: 1151 ITVDGSVYTAGLG 1163



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 29/186 (15%)

Query: 342  LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG---------- 391
            + + WG G  GRLG G  +    PT++     +  +SCG  HT  +++ G          
Sbjct: 913  ITFAWGSGKDGRLGLGTDRGESNPTMLNSQQFI-YLSCGYYHTAGITEKGIYNQYYLQTD 971

Query: 392  -----------HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                         ++  G GN G+LG+        P +    +   + +V  G   S+AL
Sbjct: 972  KVKNILYFIQTGELYLWGKGNSGQLGNSSFNSSKVPILANIPQTIPIVQVVCGWQHSMAL 1031

Query: 441  TWDGLVFWWGLGLR-----SSSISFHTPVLVTGLS--SHQIVDVSIGDSHVLALSQYNEV 493
            +  G V+ WGLG       +   + +TP ++   S  + QI  +S G SH  A+S+  ++
Sbjct: 1032 SSSGQVYSWGLGEEGQLGHNDMETLNTPKMIEYFSQQAKQIKYISCGHSHSAAISEEGDL 1091

Query: 494  YAWGSN 499
            Y WG N
Sbjct: 1092 YTWGCN 1097



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 14/128 (10%)

Query: 276  CSEAHVLTVTSEGEVYSWG---------VGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVT 325
            C     + + +EG VY +G         +G   ++    T  SQ     IM      RV 
Sbjct: 1218 CGYEFTIVLNAEGTVYQFGKKISQGPDFIGTKQEIQDYVTKDSQNVTPQIMYEFGNIRVQ 1277

Query: 326  QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK--SRHTPTLVTELSDVG--AVSCGE 381
            Q++AG +H A +TE+G LYTWG+  + +L  GD K  S     L   ++++    VSCGE
Sbjct: 1278 QIAAGKNHIAIITENGELYTWGKNFYDKLDMGDDKHESNKPVKLFEGINNLQCIQVSCGE 1337

Query: 382  SHTLVLSQ 389
             H++ L++
Sbjct: 1338 FHSVCLNK 1345


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 146/285 (51%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+  V  +CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  + ++P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  F  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  T     +P+ +     I  + ++ C   H L ++   EV+SWG  +HG+LG G 
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIA-CGYYHSLALSKGSEVFSWGQNKHGQLGLGF 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L ++    ++  L G   TQV+AG +HS  +T  G ++ WG    G+LG  D   R  P
Sbjct: 174 ELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 121/264 (45%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + + G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ ++  G   S+AL+    VF WG      LGL    
Sbjct: 118 LPGTEEYIRV--PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L       V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRFVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +      P  +  L+  QIV ++ G  H LALS+ +EV++WG N  GQ G        
Sbjct: 119 PGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 SSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207



 Score = 49.3 bits (116), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  123 bits (308), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 163/351 (46%), Gaps = 29/351 (8%)

Query: 213 RLQSLPSNIRHIEAGQ-FCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAI 268
           R ++ P  +  I AG  + + ++ + G +  +G    G LG+        P RV  ++  
Sbjct: 48  RHRNAPHPVWGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGA 107

Query: 269 VSLSVSKCS--EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG--KRV 324
               V K +  E H L +T++GEV++WG    G+LG G    +R P  +        + +
Sbjct: 108 PLNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENI 167

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE----LSDVGAVSCG 380
              + G  HS AV  DG ++ WG    G++G G LK+R  P  V      L+ V AV+ G
Sbjct: 168 VGAACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAG 227

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRK--FRVRKVCAGTSFS 437
            +H+L LS DG TVW+ G    G+LG   D  +    +V+ ++ +    V  + AG +FS
Sbjct: 228 FAHSLALSVDG-TVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFS 286

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLV---TGLSSHQIVDVSIGDSHVLALS 488
           +ALT DG V+ WG      LG+   +     P+ V    G+    +  ++    H LAL 
Sbjct: 287 LALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALM 346

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               V AWG+   GQ GQ    N  D P+       +C   + AG   S+A
Sbjct: 347 NDGSVLAWGAGDRGQLGQ-GAQNHEDHPTLASLHSVIC---LAAGRYHSLA 393



 Score =  120 bits (300), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 120/425 (28%), Positives = 192/425 (45%), Gaps = 49/425 (11%)

Query: 117 LLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTY 176
           +L+ +L      +  LI +  +  L+L  LA  + +P   R S  + T     + P   +
Sbjct: 1   MLKSMLSSEHSLKPVLIPAIVVTILLLGCLACTSSQP---RPSEEARTSARHRNAPHPVW 57

Query: 177 NI----GDTDISVAHS-KVYTWGCNLHHQI-LDEVRGKCSRPRL---QSLPSN-IRHIEA 226
            I    G   + V +   V+ WG N   Q+ +   +   S  R+      P N +  + A
Sbjct: 58  GIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAA 117

Query: 227 GQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRV------PLEAAIVSLSVSKCS 277
           G+  +  L + G +  +G   KG LG      +  P +V      PLE    ++  + C 
Sbjct: 118 GERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLE----NIVGAACG 173

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHS 334
             H L V S+G V++WG    G++G G   +++ P+ +M   +GK    V  V+AG +HS
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVM--RFGKPLAGVKAVAAGFAHS 231

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE-----LSDVGAVSCGESHTLVLSQ 389
            A++ DG ++ WG+ + G+LG      R  P  V       L +V A++ G + +L L++
Sbjct: 232 LALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTR 291

Query: 390 DGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFR---VRKVCAGTSFSVALTWDGL 445
           DG  VW+ G+  +G+LG     G V  P  + A        VR + A    S+AL  DG 
Sbjct: 292 DGE-VWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGS 350

Query: 446 VFWWGLGLR---SSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           V  WG G R         H   P L    S H ++ ++ G  H LA+++   V AWG N 
Sbjct: 351 VLAWGAGDRGQLGQGAQNHEDHPTLA---SLHSVICLAAGRYHSLAVAENGAVLAWGDNQ 407

Query: 501 MGQCG 505
            GQ G
Sbjct: 408 KGQLG 412



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 25/184 (13%)

Query: 190 VYTWGCNLHHQILDEVRGKCS----RPRLQSLPS------NIRHIEAGQFCTFLLDSTGG 239
           V+ WG N   Q+     G CS    +  +Q + S      N+  I AG+  +  L   G 
Sbjct: 240 VWAWGDNEFGQL-----GDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGE 294

Query: 240 LLVYGK---GWLGLA--NTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           +  +G    G LG+   N  ++ PLP R      +  +     +  H L + ++G V +W
Sbjct: 295 VWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAW 354

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G G+ G+LG G    +  P L    L+   V  ++AG  HS AV E+G +  WG+   G+
Sbjct: 355 GAGDRGQLGQGAQNHEDHPTL--ASLHS--VICLAAGRYHSLAVAENGAVLAWGDNQKGQ 410

Query: 354 LGHG 357
           LG G
Sbjct: 411 LGIG 414


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 152/317 (47%), Gaps = 28/317 (8%)

Query: 234  LDSTGGLLVYGK------GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
            LD++ GL+ +G       G+   A    QP P+R+P    I  +        +   +T  
Sbjct: 709  LDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLP-NFNIPDICSISSGSYYSSVLTEN 767

Query: 288  GEVYSWGVGEHGK-----LGHGNTLSQRRPKLIMGGLYG-KRVTQVSAGHSHSAAVTEDG 341
            G+VY WG G         LG    + Q   +L+   L     V  VS G  H AAV  +G
Sbjct: 768  GDVYLWGRGAVKTPAVPILG----IPQIEDQLLPFKLESLSDVVSVSIGFCHGAAVRANG 823

Query: 342  LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
             L TWG G++G+LGHGD  ++  P ++  L+   +  V CGE HT+ L+++G  V+S G+
Sbjct: 824  ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGK-VYSWGA 882

Query: 400  GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW--DGLVFWWGLGLRSSS 457
               G+LG  D  + ++P  + AL K+ V ++ +G++    LT   + LVF  G  + ++S
Sbjct: 883  SEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAAS 942

Query: 458  ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS-NTMGQCGQDNFSNPVDQP 516
            +    P LV  L    I  +  G     A+++  +VY WG+   +G  G    ++    P
Sbjct: 943  V-VSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTETS----P 997

Query: 517  SKVVGLEDVCVRQICAG 533
              +  L +  +RQI  G
Sbjct: 998  KLIEALRNQSIRQISCG 1014



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 192/422 (45%), Gaps = 77/422 (18%)

Query: 146  LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSK-VYTWGCNLHHQILDE 204
            LAD++    G   +   ++   +  +P L+     + I +  S+ + TWG   + ++  +
Sbjct: 670  LADNSGSSTGTTPTDGFSSSPPNGQSPSLSSTAHRSAIHLDTSRGLMTWGSASNCKLGFK 729

Query: 205  VRGK-CSRPRLQSLPS-NIRHI---EAGQFCTFLLDSTGGLLVYGKGW--------LGLA 251
            V  K  S+P  + LP+ NI  I    +G + + +L   G + ++G+G         LG+ 
Sbjct: 730  VTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIP 789

Query: 252  NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
                Q LP ++   + +VS+S+  C   H   V + GE+ +WGVGE+G+LGHG+T +Q  
Sbjct: 790  QIEDQLLPFKLESLSDVVSVSIGFC---HGAAVRANGELLTWGVGENGQLGHGDTNNQIE 846

Query: 312  PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL 371
            PK+I   L    +TQV  G  H+  +T++G +Y+WG  ++G+LG GD+    +P  V+ L
Sbjct: 847  PKIIQS-LTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSAL 905

Query: 372  S--DVGAVSCGESHTLVLSQD-------------------------------------GH 392
               +V  ++ G +H  VL+                                       GH
Sbjct: 906  EKYNVLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGH 965

Query: 393  ----------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                       V++ G+G   +LGH      T+PK+IEALR   +R++  G   +  LT 
Sbjct: 966  YSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTD 1023

Query: 443  DGLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL----SQYNEVY 494
             G +F  G      L   S   + P  +  L+    + VS G+++ +AL      + + +
Sbjct: 1024 SGRIFTCGKDSFGQLGQMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTRSFRDKF 1083

Query: 495  AW 496
             W
Sbjct: 1084 CW 1085


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                   C     S  +   G ++ +GLG
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 146/285 (51%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+  V  +CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  + ++P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  F  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  T     +P+ +     I  + ++ C   H L ++   EV+SWG  +HG+LG G 
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIA-CGYYHSLALSKGSEVFSWGQNKHGQLGLGF 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L ++    ++  L G   TQV+AG +HS  +T  G ++ WG    G+LG  D   R  P
Sbjct: 174 ELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 121/264 (45%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + + G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ ++  G   S+AL+    VF WG      LGL    
Sbjct: 118 LPGTEEYIRV--PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L       V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRFVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 90.5 bits (223), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +      P  +  L+  QIV ++ G  H LALS+ +EV++WG N  GQ G        
Sbjct: 119 PGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 SSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207



 Score = 48.9 bits (115), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 68/368 (18%)

Query: 214 LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI----------QPLP 259
           ++SL S  ++ + AG+F +  L   G +  +G   +G  G   T I          +P P
Sbjct: 594 IESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRP 653

Query: 260 KRVP---LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH---------GNTL 307
             +P    +  +VS++       H   VT++GE+Y++G G   +LGH         GN L
Sbjct: 654 IVLPDDLRKKTVVSIAAGG---YHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNAL 710

Query: 308 SQR---------RPK-LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
             R         +PK   +  L G+ V QV+ G  HSA VTE+G LYTWG G +G+LGHG
Sbjct: 711 HYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHG 770

Query: 358 DLKSRHTPTLVTE-LSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED----- 409
           D+  + TP  V   + D  +  V+CGE+H+  +   G  +++ G    G+LG  D     
Sbjct: 771 DMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAG-VIYTTGGDESGQLGKGDEWICA 829

Query: 410 ------TG-------KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LG 452
                 TG       ++ T   I ++R  +   +  G  F  A+T  GL++ WG    LG
Sbjct: 830 THGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALG 889

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  ++ +    +V V+ GD H  AL+   ++Y WGS+  G+ G    +  
Sbjct: 890 LGPSG-DVSEPTHLSSIDG--VVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEG 946

Query: 513 VDQPSKVV 520
           V +  K+V
Sbjct: 947 VTRTPKLV 954



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 161/369 (43%), Gaps = 68/369 (18%)

Query: 233 LLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEG 288
           + + TG +L +G    G LG      Q  P  + +E+ + V + +    E H L +T  G
Sbjct: 562 IKEQTGLILSWGANSDGVLGHTGGIEQLWP--LAIESLSSVQVKMVAAGEFHSLCLTENG 619

Query: 289 EVYSWGVGEHGKLGHGNT----------LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           EV S+G+ + G+ G   T          +++ RP ++   L  K V  ++AG  HSA VT
Sbjct: 620 EVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVT 679

Query: 339 EDGLLYTWGEGDHGRLGHGDLKS--------------------RHTPTLVTELSD--VGA 376
            DG LYT+G G   +LGH  + +                    +  PT ++ L+   V  
Sbjct: 680 ADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQ 739

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR-KVCAGTS 435
           V+CG  H+  ++++G  +++ G G  G+LGH D     TPK +EA  K ++  KV  G +
Sbjct: 740 VACGRFHSACVTEEG-ALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGEN 798

Query: 436 FSVALTWDGLVF---------------W----WGLGLRSSSISFHT--PVLVTGLSSH-- 472
            S A+   G+++               W     G G   S  S     P  ++ LS    
Sbjct: 799 HSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHV 858

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           Q VD++ G     A++    +Y WG  T    G    S  V +P+ +  ++ V    +  
Sbjct: 859 QFVDIACGHGFCAAITNRGLLYTWGKGTALGLGP---SGDVSEPTHLSSIDGVV--SVAC 913

Query: 533 GSLFSIAYT 541
           G + + A T
Sbjct: 914 GDIHAAALT 922



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 125/304 (41%), Gaps = 57/304 (18%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G + SWG    G LGH   + Q  P L +  L   +V  V+AG  HS  +TE+G + ++G
Sbjct: 567 GLILSWGANSDGVLGHTGGIEQLWP-LAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFG 625

Query: 348 EGDHGRLGH--------GDLKSRHTPTLVTELSD-----VGAVSCGESHTLVLSQDGHTV 394
             D G+ G          DL +   P  +    D     V +++ G  H+ +++ DG  +
Sbjct: 626 LNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGE-L 684

Query: 395 WSMGSGNLGKLGHE----------------DTGKVT----TPKVIEALRKFRVRKVCAGT 434
           ++ G G   +LGH+                ++ + +     P  + AL    V++V  G 
Sbjct: 685 YTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGR 744

Query: 435 SFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLV-TGLSSHQIVDVSIGDSHVLALS 488
             S  +T +G ++ WG G              TP  V  G+    +V V+ G++H  A+ 
Sbjct: 745 FHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVD 804

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR--QICAGSLFSIAYTVPPSN 546
               +Y  G +  GQ G+              G E +C    + C GS +S    +P   
Sbjct: 805 SAGVIYTTGGDESGQLGK--------------GDEWICATHGEGCTGSGWSCQERIPTFL 850

Query: 547 SALS 550
           S LS
Sbjct: 851 SILS 854


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   +  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 46/373 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
               Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 ECQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +             W S   GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAF 553
              P +      F
Sbjct: 378 YSSPQSCGPPDDF 390



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                   C     S  +   G ++ +GLG
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 157/332 (47%), Gaps = 48/332 (14%)

Query: 240 LLVYGKGW---LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           LL +G G    LG  N T+    P P +V  +  I+ ++ S    A    VTS+G++Y+W
Sbjct: 99  LLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISA---AVTSQGQIYTW 155

Query: 294 GVGEHGKLGHGNTLSQRR----PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           G    G L    +LS+      P LI+      +  QV+ G +H A VT+DG L TWG  
Sbjct: 156 GKTRGGSLSQQKSLSRATNLLLPTLIVAPEV--QFVQVACGKTHLAGVTKDGKLITWGNP 213

Query: 350 DHGRLGHG---DLKSRHTPTLVTELSDVGAV---------------SCGESHTLVLSQDG 391
           D G+LGH      +S++        +D  A+               SCG  HT  L+QDG
Sbjct: 214 DQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDG 273

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             V++ G G  G LGH +  +V  PK +E L    + K+  G  ++ AL  DG ++ WG 
Sbjct: 274 E-VYTWGFGKNGALGHGNWDQVDLPKKVEGLS--NIVKIDCGMDYTFALDKDGNIYSWGS 330

Query: 451 -----LGLRSSSISFHTPVLVTGL---SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
                LG   S+I+ H   +   L   SSH +VD+S G+ H   L+   E + WG    G
Sbjct: 331 NRYGQLGTTQSNINKHNVPIQLQLPHGSSH-VVDISCGEEHSAFLNDKGEAFIWGYGNDG 389

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           Q G    +N ++QP K+   E +  R +C G 
Sbjct: 390 QLGHKEKTN-LNQPKKLEFTEPL-RRVVCGGG 419



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 26/237 (10%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           + C   H   +T +GEVY+WG G++G LGHGN      PK + G      + ++  G  +
Sbjct: 259 ASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEG---LSNIVKIDCGMDY 315

Query: 334 SAAVTEDGLLYTWGEGDHGRLG--HGDLKSRHTP---TLVTELSDVGAVSCGESHTLVLS 388
           + A+ +DG +Y+WG   +G+LG    ++   + P    L    S V  +SCGE H+  L+
Sbjct: 316 TFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLN 375

Query: 389 QDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
             G   +W  G GN G+LGH++   +  PK +E     R R VC G    V +T  G +F
Sbjct: 376 DKGEAFIW--GYGNDGQLGHKEKTNLNQPKKLEFTEPLR-RVVCGGGHTGV-ITTAGKLF 431

Query: 448 WWGLG---------LRSSSISFH-TPVLVTGLS---SHQIVDVSIGDSHVLALSQYN 491
            +G G         +  S  +F   P  V  +S     +++++++G +H LA++  N
Sbjct: 432 LFGRGRDGQLGRGDVNESMAAFRIEPKEVVNISQTLKAEVLEIALGSNHCLAIAAKN 488



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 89/213 (41%), Gaps = 33/213 (15%)

Query: 342 LLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD---VGAVSCGESHTLVLSQDGHTVWSM 397
           LL +WG G +G+LG+G+   S   P+ V  LSD   +   + G+    V SQ     W  
Sbjct: 98  LLLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGK 157

Query: 398 GSGNLGKLGHEDTGKVTT----PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
             G  G L  + +    T    P +I A     V+  C  T  +  +T DG +  WG   
Sbjct: 158 TRG--GSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLA-GVTKDGKLITWGNPD 214

Query: 451 ---LGLRS--------------SSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNE 492
              LG  +              S   ++    V G L S +I+  S G  H   L+Q  E
Sbjct: 215 QGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGE 274

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           VY WG    G  G  N+ + VD P KV GL ++
Sbjct: 275 VYTWGFGKNGALGHGNW-DQVDLPKKVEGLSNI 306


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 154/331 (46%), Gaps = 31/331 (9%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGL 240
           I     +VY WG     ++   +    S P++    S+IR   +  G++ T  L  +G +
Sbjct: 318 IVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACGEYHTCALTDSGDV 377

Query: 241 LVYGKG----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK      +       Q L  +  L    +S+S   C E H   V+S G ++++G G
Sbjct: 378 YTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAIVSSCGRLFTYGDG 437

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLYT 345
             G LGHGN  S   PK +   L G  V  V+ G  H+AA+ E            G L+T
Sbjct: 438 TFGVLGHGNYHSFSSPKEVES-LKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKLFT 496

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+ D GRLGH D  ++  PT V++L D     VSCG   TL L+  G  V++MGS   G
Sbjct: 497 WGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGK-VFAMGSAKYG 555

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA-LTWDGLVFWWG------LGLRSS 456
           +LG+          V+E + K    K+ +  S+ VA LT  G V+ WG      LGL  +
Sbjct: 556 QLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDT 613

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             + +TP  V  L   Q+  ++ G S  +A+
Sbjct: 614 E-NRYTPCFVEALRDRQVDTITCGPSFTVAI 643



 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 125/247 (50%), Gaps = 24/247 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H   VT +GEVY WG G+ G+LG    +    PK I+  L   RV +V+ G  H+ A+T+
Sbjct: 315 HAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPK-IVDSLSDIRVKKVACGEYHTCALTD 373

Query: 340 DGLLYTWGEGDHGRL-GHGDLKSR---HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
            G +YTWG+     L   G ++S+   H  +L  E   + +++CGE HT ++S  G  ++
Sbjct: 374 SGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAIVSSCGR-LF 432

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL-----------TWDG 444
           + G G  G LGH +    ++PK +E+L+   VR V  GT  + A+           T  G
Sbjct: 433 TYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAERFKYNTSTG 492

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            +F WG      LG  + +++   P  V+ L  +  V VS G    LAL+   +V+A GS
Sbjct: 493 KLFTWGDADEGRLG-HADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFAMGS 551

Query: 499 NTMGQCG 505
              GQ G
Sbjct: 552 AKYGQLG 558



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 142/339 (41%), Gaps = 20/339 (5%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CS 277
           +++++  G     ++   G +  +G+G  G     I        +  ++  + V K  C 
Sbjct: 305 DVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVACG 364

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKL-GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           E H   +T  G+VY+WG      L   G   SQ         + G  ++ ++ G  H+A 
Sbjct: 365 EYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTAI 424

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL------- 387
           V+  G L+T+G+G  G LGHG+  S  +P  V  L    V +V+CG  HT  +       
Sbjct: 425 VSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEVSAER 484

Query: 388 ---SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
              +     +++ G  + G+LGH D      P  +  L  +   +V  G   ++ALT  G
Sbjct: 485 FKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMG 544

Query: 445 LVFWWGLGLRSSSISFHT---PVLVTGLSSHQIVD-VSIGDSHVLALSQYNEVYAWGSNT 500
            VF  G        + H     V+V G+   + V  +S G  HV  L+    VY WG   
Sbjct: 545 KVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGE 604

Query: 501 MGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            G+ G  +  N    P  V  L D  V  I  G  F++A
Sbjct: 605 NGELGLGDTENRYT-PCFVEALRDRQVDTITCGPSFTVA 642



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 15/181 (8%)

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           T + DV  V+ G +H  ++++ G  V+  G G  G+LG      +++PK++++L   RV+
Sbjct: 301 TAMLDVQNVALGGNHAAIVTKQGE-VYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVK 359

Query: 429 KVCAGTSFSVALTWDGLVFWWGLG----------LRSSSISFHTPVLVTGLSSHQIVDVS 478
           KV  G   + ALT  G V+ WG            +RS  ++    + V G+S   I  ++
Sbjct: 360 KVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGIS---ISSIA 416

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            G+ H   +S    ++ +G  T G  G  N+ +    P +V  L+ +CVR +  G+  + 
Sbjct: 417 CGEWHTAIVSSCGRLFTYGDGTFGVLGHGNY-HSFSSPKEVESLKGLCVRSVACGTWHTA 475

Query: 539 A 539
           A
Sbjct: 476 A 476



 Score = 47.4 bits (111), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           PK++E+     V+ V  G + +  +T  G V+ WG G      +   +   +P +V  LS
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLS 354

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
             ++  V+ G+ H  AL+   +VY WG ++
Sbjct: 355 DIRVKKVACGEYHTCALTDSGDVYTWGKDS 384



 Score = 40.8 bits (94), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
           +SI    P L+   +   + +V++G +H   +++  EVY WG    G+ GQ      +  
Sbjct: 288 NSIYSLVPKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQ-RIDMDISS 346

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYT 541
           P  V  L D+ V+++  G   + A T
Sbjct: 347 PKIVDSLSDIRVKKVACGEYHTCALT 372


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 145/318 (45%), Gaps = 23/318 (7%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           S I+ I  G+  T ++   G +   G    G LG          KR+ L   + +    K
Sbjct: 66  SEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGR-----KRLQLILGLDAFVFKK 120

Query: 276 --CSEAHVLTVTSEGEVYSWGVGEHGKLG-HGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
             C   H + V   G+++SWG    G+LG +     +  P+++   L    + QV+ G  
Sbjct: 121 VACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKT-LGTSIIVQVACGMK 179

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQ 389
           H+ A+T +G LY+WG    G+LG G D++S   P L+  L+ V    ++CG  H++ +S+
Sbjct: 180 HALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK 239

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            G  ++  G    G+LG  DT     P  ++ LR  ++     G  FSV LT DG VF  
Sbjct: 240 SG-AIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTC 298

Query: 450 GLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQ 503
           G G+       S+ +   P  V  L    +  +S G  H LAL      VYAWG    GQ
Sbjct: 299 GAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQ 358

Query: 504 CGQDNFSNPVDQPSKVVG 521
            G +N +  +  P  V G
Sbjct: 359 LG-NNSTRSIPTPQVVHG 375



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 150/298 (50%), Gaps = 24/298 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSL----PSNIRHIEAGQFCTFLLDSTGGLLVY 243
            K+Y+ G N + Q+  E RG   R RLQ +        + +  G + T  ++  G L  +
Sbjct: 85  GKIYSCGNNDYGQLGHE-RG---RKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSW 140

Query: 244 G---KGWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LGL +   ++  P+ V      + + V+ C   H L +T+ GE+YSWG    G
Sbjct: 141 GSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVA-CGMKHALALTNNGELYSWGSNSEG 199

Query: 300 KLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +LG G +  S+ +PKLI   L G  +  ++ G  HS A+++ G ++ WG+   G+LG  D
Sbjct: 200 QLGLGVDIRSEVKPKLI-NTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND 258

Query: 359 LKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            ++R+ P  +  L  + +   +CGE  ++ L+ DG  V++ G+G  G+LGH        P
Sbjct: 259 TQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDG-GVFTCGAGMYGQLGHGSNNNEILP 317

Query: 417 KVIEALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLG-----LRSSSISFHTPVLVTG 468
           + +  L    V ++  G   ++AL    G V+ WGLG       +S+ S  TP +V G
Sbjct: 318 RQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHG 375



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 136/270 (50%), Gaps = 14/270 (5%)

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTE 339
           ++  +G+++ WG   HG+LG G    +    L+   +  K+   + Q++ G +++  +T 
Sbjct: 26  SLLKKGDMFCWGNTRHGELGLGGI--EDEIILVPCQVDFKKASEIQQIACGENYTVVITH 83

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG +Y+ G  D+G+LGH   + R    L  +      V+CG  HT+ +++ G  ++S GS
Sbjct: 84  DGKIYSCGNNDYGQLGHERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQ-LFSWGS 142

Query: 400 GNLGKLGHEDTGKV-TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LG      +  +P++++ L    + +V  G   ++ALT +G ++ WG      LG
Sbjct: 143 NSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L     S   P L+  L+   I  ++ G  H +A+S+   ++ WG NT GQ G ++  N 
Sbjct: 203 LGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNR 262

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            + P ++  L +  +     G  FS+  TV
Sbjct: 263 -NLPHQLQTLRNAKICYAACGEEFSVFLTV 291


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 155/327 (47%), Gaps = 29/327 (8%)

Query: 240 LLVYGKGWLGLANTTIQPLPKRVPLEAAIVS---LSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +L +GK   G     ++  P   P    + +   L    C   H + +  +G VY+ G  
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 297 EHGKLGHGNTLSQRRPKL---IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
             G+LGH       +P +    +G L  +++T VS G +HS AV E G ++ WG G+ G+
Sbjct: 61  SCGQLGH------NKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQ 114

Query: 354 LGHGDLKSR-HTPTLVTELSD--VGAVSCGESHTLVLSQDGHT-VWSMG-SGNLGKLGHE 408
           LG G  ++    P L+  L D  +  V CG  H + LS+DG    W    SG LG LG  
Sbjct: 115 LGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLG-LGKG 173

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
           +  K+  P+ +++L    + K+ AG   S AL+  G VF WG      LGL         
Sbjct: 174 EPSKL-FPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQ-DRAV 231

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           P  +  L S ++V +S G+ H  AL++   ++ +G  + GQ G  + +N +  P +V+ L
Sbjct: 232 PCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANEL-LPRRVLEL 290

Query: 523 EDVCVRQICAGSLFSIAYTVPPSNSAL 549
               V QI  G   ++A+   PS+  +
Sbjct: 291 MGTEVSQITCGRHHTLAFA--PSSGGV 315



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 10/244 (4%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +++  C +AH L V  +G+V++WG GE G+LG G T +  R   ++  L   R+ QV  G
Sbjct: 85  ITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCG 144

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDV--GAVSCGESHTLVL 387
           + H  A+++DG L+TWG+   G+LG G  + S+  P  +  L+ +    ++ G  H+  L
Sbjct: 145 NQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFAL 204

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           S  G  V+  G    G+LG  D      P  I+ LR  +V  +  G   + ALT DG +F
Sbjct: 205 SLSG-AVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLF 263

Query: 448 W-----WGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS-QYNEVYAWGSNTM 501
                 WG     S+ +   P  V  L   ++  ++ G  H LA +     VYA+G N+ 
Sbjct: 264 TFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH 323

Query: 502 GQCG 505
           GQ G
Sbjct: 324 GQLG 327



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 18/214 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +++TWG N   Q L   +G+ S+   Q L S     +  I AG   +F L  +G +  +G
Sbjct: 156 QLFTWGQNTSGQ-LGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWG 214

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           K   G LGL +   + +P  +    +   + +S C E H   +T +G ++++G G  G+L
Sbjct: 215 KNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHIS-CGEEHTAALTKDGGLFTFGDGSWGQL 273

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT-EDGLLYTWGEGDHGRLGHGDLK 360
           GHG+T ++  P+ ++  L G  V+Q++ G  H+ A     G +Y +G   HG+LG G L 
Sbjct: 274 GHGSTANELLPRRVLE-LMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLS 332

Query: 361 SRHTP-TLVTEL------SDVGAVSCGESHTLVL 387
           +  +P  L T          V  ++CG  H+ +L
Sbjct: 333 ADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLL 366



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 14/168 (8%)

Query: 179 GDTDISVAHS-KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLD 235
           GD   +++ S  V+ WG N   Q+ L++++ +     ++ L S  + HI  G+  T  L 
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALT 257

Query: 236 STGGLLVYGKG-W--LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT-SEGEVY 291
             GGL  +G G W  LG  +T  + LP+RV LE     +S   C   H L    S G VY
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRV-LELMGTEVSQITCGRHHTLAFAPSSGGVY 316

Query: 292 SWGVGEHGKLGHGNTLSQRRP-----KLIMGGLYGKRVTQVSAGHSHS 334
           ++G   HG+LG G   + + P       + G ++G  VT+++ G  HS
Sbjct: 317 AFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGT-VTKITCGGDHS 363


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  122 bits (307), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 53/368 (14%)

Query: 187 HSKVYTWGCNLHHQ----ILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           H+ +  WG     Q    I +E    C    L+  P  +R + AG   +  +   G L  
Sbjct: 4   HTSLIAWGAGEDGQLGIGINEEKEWVCVVNALE--PYKVRSVVAGSRNSLAICDDGKLFT 61

Query: 243 YG---KGWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVG 296
           +G   +G LG  A T  + +P +V    A+ ++++ + +    H L V  +G  Y+WG  
Sbjct: 62  WGWNQRGTLGHPAETKTENIPSQV---KALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 297 EHGKLGH--------GNTLS------QR-RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           E+G+ G         G TL       QR  PKL+        V QV+AG +HS  +T +G
Sbjct: 119 EYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLV--------VRQVAAGGTHSVVLTREG 170

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
            ++TWG+        GD+K    P  V  L  V  ++ G  H L L +DG T+W+ G+  
Sbjct: 171 HVWTWGQ----PWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDG-TLWAWGNNE 225

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR------- 454
            G+LG  DT   + P  ++ L    +  + AG   S ALT DG V+ WG G         
Sbjct: 226 YGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 285

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG---QDNFSN 511
           +   S   P  V  L+   IV +S G +H +AL+Q   ++++G    G+ G   +     
Sbjct: 286 NDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQ 345

Query: 512 PVDQPSKV 519
           PV+ P+ +
Sbjct: 346 PVEVPTDI 353



 Score =  113 bits (282), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 22/262 (8%)

Query: 187 HSKVYTWGCNLHHQILDEVR-----GKCSR-----PRLQSLPSNIRHIEAGQFCTFLLDS 236
             + Y WG N + Q  +E       GK  R     P+  +    +R + AG   + +L  
Sbjct: 109 QGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTR 168

Query: 237 TGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
            G +  +G+ W       I  +P RV     +  + +      H L +  +G +++WG  
Sbjct: 169 EGHVWTWGQPWPPGDIKQIS-VPVRV---QGLEKVKLIAVGAFHNLALQEDGTLWAWGNN 224

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           E+G+LG G+T  + +P + + GL G  +  ++AG  HS A+T+DG +Y WG G+HGRLG 
Sbjct: 225 EYGQLGTGDTQPRSQP-IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGF 283

Query: 357 G--DLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G  D  S+  P  V  L+  D+  +SCG +H++ L+QDG  ++S G G+ G+LG+    K
Sbjct: 284 GDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQDGR-MFSFGRGDHGRLGYGK--K 340

Query: 413 VTTPKVIEALRKFRVRKVCAGT 434
           VTT + +E        K  +GT
Sbjct: 341 VTTGQPVEVPTDIPPPKSLSGT 362


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 178/397 (44%), Gaps = 43/397 (10%)

Query: 189 KVYTWGCNLHHQI-LDEVRGK--CSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++Y WG   H Q+ L  +  +   +  ++   P + ++ +  G   T  L + G +   G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 245 KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
                 LG    T +PL   +P     V + +S C   H L ++  G+V SWG  + G+L
Sbjct: 66  SNDHSQLGHELPTKRPL--LIPELQDYVVIQIS-CGSRHSLALSEWGQVLSWGDNDCGQL 122

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG---D 358
           GH       +   ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG     D
Sbjct: 123 GHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182

Query: 359 LKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           L   + P  +T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D      P
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDEANRAYP 241

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSS 471
             ++ LR   VR V  G  FSV LT +G VF  G G         S +   P +V  L  
Sbjct: 242 TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMG 301

Query: 472 HQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSN---------PVDQPSKVVG 521
             I  V+ G+ H LAL      VYA+G  + GQ G  +  +         P   PS    
Sbjct: 302 STITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSAL 361

Query: 522 LE------DVCVRQICAGSLFSIAYT------VPPSN 546
           L+       V +RQI +G   SI  T      VPP +
Sbjct: 362 LQSNDAKVSVVIRQIFSGGDQSIVTTTLFMEKVPPED 398



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 136/271 (50%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P  I        V QV+ GH H+  +T +G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTANG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  DH +LGH +L ++  P L+ EL D  V  +SCG  H+L LS+ G  V S G 
Sbjct: 60  KVYACGSNDHSQLGH-ELPTKR-PLLIPELQDYVVIQISCGSRHSLALSEWGQ-VLSWGD 116

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LGH  D   V  PKV+  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + S     H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G ++ +
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA 236

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N    P+++  L  + VR +  G  FS+  T
Sbjct: 237 NRA-YPTQLKTLRTLGVRFVACGDEFSVFLT 266



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 19/280 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSR--PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           A+ KVY  G N H Q+  E+  K     P LQ     +  I  G   +  L   G +L +
Sbjct: 57  ANGKVYACGSNDHSQLGHELPTKRPLLIPELQDYV--VIQISCGSRHSLALSEWGQVLSW 114

Query: 244 GK---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGE 297
           G    G LG A +  I  LPK V     +VS +V +  C   H L +TS GE+YSWG   
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVV---RQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 HGKLGHGN--TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           +G+LG  +   L+     L +  L G  +  ++ G +HS  +++ G ++ WG  + G+LG
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231

Query: 356 HGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
             D  +R  PT +  L  +G   V+CG+  ++ L+ +G  V++ G+G  G+LGH  +   
Sbjct: 232 LNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEG-GVFTCGAGAYGQLGHGFSSNE 290

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWGLG 452
             P+++  L    + +V  G   ++AL    G V+ +GLG
Sbjct: 291 MLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG 330


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 167/393 (42%), Gaps = 44/393 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                   C     S  +   G ++ +GLG            L TG +S++    ++  +
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                      YA+     GQC  D     +D        E  CV++I +G   S ++  
Sbjct: 345 W----------YAYN----GQCLPD-----IDSE------EYFCVKRIFSGGDQSFSHYS 379

Query: 543 PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
            P N      F   C D     +T+    ++++
Sbjct: 380 SPQNCGPPDDFR--CPDPTKQIWTVNEALIQKW 410



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KR+  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 2063

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 27/296 (9%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           + +S   C  +H   ++++G +++WG+G +G+LGHG+   Q  P+L+ G L    +  V+
Sbjct: 9   IKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLV-GELLNTNIVGVA 67

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS-----RHTPTLVTELS-----DVGAVS 378
            G  H+AA +E G LY+WG+ + G LGHG+L+      + TP L+  LS      V  V+
Sbjct: 68  LGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVA 127

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TPKVIEALRKFRVRKVCAGTSF 436
           CG  HTL  + D  T      G+       D G+    TP+ I AL    V+++  G + 
Sbjct: 128 CGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGVQQIACGWAH 187

Query: 437 SVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
              L   G ++ WG G               P  V  L   +IV ++ G +H+ ALS   
Sbjct: 188 CAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSDKG 247

Query: 492 EVYAWGS--NTMGQCGQDNFSNP-----VDQ--PSKVVGLEDVCVRQICAGSLFSI 538
           EV+  G+    +G  G+   SNP      +Q  P +V  L  + + Q+  G + +I
Sbjct: 248 EVFVCGTGCGRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMISTI 303



 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 29/282 (10%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           A   ++TWG   + ++        + PRL  + L +NI  +  G+  T     TG L  +
Sbjct: 26  AKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVALGERHTAAFSETGELYSW 85

Query: 244 GKGWLGL--------ANTTIQPLPKRVPLEAAIVSLSVS--KCSEAHVLTVTSEGEVYSW 293
           G    G+         +  IQ  PK +   + ++   V+   C   H L  T++   Y W
Sbjct: 86  GDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIW 145

Query: 294 G----VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           G             G T+ +  P+ I G L G+ V Q++ G +H A + + G LYTWGEG
Sbjct: 146 GDGGHGVLGQGGDFGRTI-EWTPQSI-GALAGRGVQQIACGWAHCAVLMDTGDLYTWGEG 203

Query: 350 DHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLG 406
             GRLGHGD +    P  V  L  + +  ++CG +H   LS  G   V   G G LG  G
Sbjct: 204 AGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSDKGEVFVCGTGCGRLGLDG 263

Query: 407 --------HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                   H +      P+ +E LR  ++ +V  G   ++ L
Sbjct: 264 EQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMISTIVL 305



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQ 473
           + +LR+ ++ +V  G S + A++  GL+F WG+G             + P LV  L +  
Sbjct: 3   VASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTN 62

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           IV V++G+ H  A S+  E+Y+WG    G  G
Sbjct: 63  IVGVALGERHTAAFSETGELYSWGDANFGVLG 94


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 125/241 (51%), Gaps = 24/241 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHG--NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H   +  EG++Y+WG  E+ +LGHG  N   Q  P+++   L G ++  +S G  H+ AV
Sbjct: 57  HSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVV-DALRGIKIVDISCGEYHTGAV 115

Query: 338 TEDGLLYTWGEGDH-----GRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLS 388
            E+G L+TWG G       G LGH   +    P LV  L D G    +V CGE HT+ L+
Sbjct: 116 DEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALT 175

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           +DG  +W+ G+G  G+LG+  +     P+ +E      +  + AG  F+ A+T  G V+ 
Sbjct: 176 KDGE-IWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYS 234

Query: 449 WG------LGLRSS-SISFHT----PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           WG      LGL    ++ ++     PV+V  LS+  +  VS G  H  A++   +++ WG
Sbjct: 235 WGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG 294

Query: 498 S 498
           +
Sbjct: 295 A 295



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 33/288 (11%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGN--------TLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           ++++  V++WG G  G+LGHG+        +  +  P+ I+    GK + ++  G +HSA
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPR-ILETFEGKNIAKLDFGATHSA 59

Query: 336 AVTEDGLLYTWGEGDHGRLGHG----DLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ 389
           A+ ++G LYTWG  ++ +LGHG    D++S   P +V  L  +  V  SCGE HT  + +
Sbjct: 60  AIDKEGKLYTWGSNEYHQLGHGSSNQDIQS--IPRVVDALRGIKIVDISCGEYHTGAVDE 117

Query: 390 DGHT-VWSMGSGNL---GKLGHEDTGKVTTPKVIEAL--RKFRVRKVCAGTSFSVALTWD 443
           +G    W  G   +   G LGH      + P+++  L  +   V+ V  G   +VALT D
Sbjct: 118 EGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKD 177

Query: 444 GLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
           G ++ WG G        +S +F  P  V   +   I  +S G     A++++ EVY+WG 
Sbjct: 178 GEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGI 237

Query: 499 NTMGQCGQD-----NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N+  Q G       ++ N    P  V  L +V V Q+ AG   + A T
Sbjct: 238 NSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVT 285



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 162/355 (45%), Gaps = 64/355 (18%)

Query: 177 NIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--------NI 221
           NI   D    HS       K+YTWG N +HQ+        S   +QS+P          I
Sbjct: 47  NIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGH----GSSNQDIQSIPRVVDALRGIKI 102

Query: 222 RHIEAGQFCTFLLDSTGGLLVYG--------KGWLGLANTTIQPLPK--RVPLEAAIVSL 271
             I  G++ T  +D  G L  +G         G LG A    + +P+  R  ++  +   
Sbjct: 103 VDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVK 162

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
           SV +C E H + +T +GE+++WG GE+G+LG+G + +   P+ +      + +  +SAG 
Sbjct: 163 SV-ECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVE-YFADENIASISAGR 220

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHG-----DLKSRHT-PTLVTELS--DVGAVSCGESH 383
             + A+TE G +Y+WG   H +LG G     D  +  T P +V  LS  +V  VS G  H
Sbjct: 221 DFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDH 280

Query: 384 TLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
              ++ DG   +W        KL  E       P  +  L+   +  V  G  ++ AL+ 
Sbjct: 281 AAAVTNDGKMFMWGA------KLWLE-------PHEMTILKDETIISVQCGRYYTAALSA 327

Query: 443 DGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            G +F +G         G R + +    P+LV  L+ + +V ++ G SH+ AL++
Sbjct: 328 SGNLFTFGKGHSNCLGHGERKTQLQ---PLLVESLNRYNVVSMTCGYSHMGALTK 379


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 20/292 (6%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTT--IQPLPKRVPLEAAIVSLSVSK 275
           +  I  G+  T L+   G +   G    G LG    T  +Q +P    L+A I     + 
Sbjct: 63  VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIPG---LDAFI--FKQAA 117

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C  +H + V + G+++ WG    G+LG G  L+      ++  L    V Q++ G  H+ 
Sbjct: 118 CGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTL 177

Query: 336 AVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           A+T +G LY WG    G+LG G D+K    P L+T L+ +    ++CG  H++V+S+ G 
Sbjct: 178 ALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSG- 236

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V+  G    G+LG  D      P +++ LR  +V+ V  G  FSV LT DG VF  G G
Sbjct: 237 AVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAG 296

Query: 453 L-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGS 498
           +       ++ +   P  +  L    +  +S G  H LAL     +VYAWG 
Sbjct: 297 MYGQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGL 348



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 15/213 (7%)

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-----SDVGAVSCGESHTLVLSQDG 391
           +  D  +Y WG   +G LG G ++  +   +  EL     + V  ++CGE+HT+++++DG
Sbjct: 22  IPNDNNMYCWGSTVYGELGLGGIEDENI-LMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             V+S G+ + G+LGHE   K    ++I  L  F  ++   G S SVA+   G +F WG 
Sbjct: 81  E-VFSCGNNDSGQLGHEKPTKRL--QMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGS 137

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL +     HTP +V  L +  +V ++ G  H LAL+   E+YAWGSN+ GQ G
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLG 197

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
                    +P  + GL  + +  I  G   SI
Sbjct: 198 LGQDVKIETRPKLITGLATIPIAFIACGGYHSI 230



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 19/273 (6%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +V++ G N   Q+  E   K    RLQ +P       +    G   +  +++ G L  +G
Sbjct: 81  EVFSCGNNDSGQLGHEKPTK----RLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWG 136

Query: 245 K---GWLGLANT-TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
               G LGL    TI   P+ V      + + ++ C + H L +T+ GE+Y+WG    G+
Sbjct: 137 SNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIA-CGKKHTLALTNNGELYAWGSNSDGQ 195

Query: 301 LGHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G  +  + RPKLI  GL    +  ++ G  HS  V++ G ++ WG    G+LG  D+
Sbjct: 196 LGLGQDVKIETRPKLIT-GLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254

Query: 360 KSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
             ++ P L+  L  + V  V+CGE  ++ L+ DG  V++ G+G  G+LGH        P+
Sbjct: 255 SDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDG-GVFTCGAGMYGQLGHGANSNEILPR 313

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWD-GLVFWW 449
            I  L    V ++  G   ++AL    G V+ W
Sbjct: 314 QIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 26/296 (8%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-----NTLSQRRPK 313
           PKR+ ++A    L +          + ++  +Y WG   +G+LG G     N L  R   
Sbjct: 5   PKRLCIKADTFHLPLK--------LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRE-- 54

Query: 314 LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD 373
             +       V Q++ G +H+  +T+DG +++ G  D G+LGH     R       +   
Sbjct: 55  --LDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIPGLDAFI 112

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCA 432
               +CG SH++ ++  G  ++  GS   G+LG      +  TP++++AL    V ++  
Sbjct: 113 FKQAACGASHSVAVNNWGQ-LFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIAC 171

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G   ++ALT +G ++ WG      LGL         P L+TGL++  I  ++ G  H + 
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIV 231

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           +S+   V+ WG NT GQ G ++ S+    P  +  L +  V+ +  G  FS+  T+
Sbjct: 232 VSKSGAVFGWGRNTFGQLGMNDISDKY-VPCLLKTLRNAKVKYVACGEEFSVFLTM 286



 Score = 40.8 bits (94), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 7/168 (4%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG N   Q+ ++++  K     L++L  + ++++  G+  +  L   GG+   G G 
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGM 297

Query: 248 ---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
              LG    + + LP+++      V   +S C + H L  V S G+VY+WG+G  G+LG 
Sbjct: 298 YGQLGHGANSNEILPRQIIELMGSVVTQIS-CGKRHTLALVPSRGKVYAWGLGGSGQLGS 356

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
               S   P++++G    K  +      S S+   +  + + +  GDH
Sbjct: 357 QTARSVATPQMVLGPWSSKNRSLAMEVDSASSTSEDCVVKHIFSGGDH 404


>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1294

 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 23/289 (7%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + I  LS+S C ++H + V   GEVY WG G +G+LG+G+  S+  P  I+         
Sbjct: 110 SKIKCLSLS-CGQSHTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSE--NNEFI 166

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESH 383
           QV  G  H+  +      Y  G  ++G+LG   L+S      + +L + G +  +CG+ H
Sbjct: 167 QVQCGSRHTILLDLKKKAYVCGSNENGQLG---LRSTKIELFIKKLDNKGFIEAACGQFH 223

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L+L + G  V+S G+ + G+LG            I +L   ++ K+ AG S S AL   
Sbjct: 224 SLLLDEQGR-VYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAG-SHSAALNKK 281

Query: 444 GLVFWWGLGLRSSSISFHTPVLVTGLSSHQ----IVDVSIGDSHVLALSQYNEVYAWGSN 499
           G ++ WG G+      F   +    ++ H       D+S+G+    A+     V+ WG+N
Sbjct: 282 GEMYIWGTGV------FGEYLFPNKINRHSSGTTFSDISVGNFFAAAVDINGAVWTWGAN 335

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA--YTVPPSN 546
           + G+ GQ ++  P   P  +  L+   V++IC G  F++A  Y +P  N
Sbjct: 336 SNGELGQGDYE-PKTLPQTLQALKGRHVQKICCGGGFAMALGYKLPKEN 383



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           + + +VY WG   + Q+ +  +     P R+ S  +    ++ G   T LLD      V 
Sbjct: 128 MQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSENNEFIQVQCGSRHTILLDLKKKAYVC 187

Query: 244 G---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G LGL +T I+   K++  +  I +     C + H L +  +G VYS G    G+
Sbjct: 188 GSNENGQLGLRSTKIELFIKKLDNKGFIEAA----CGQFHSLLLDEQGRVYSTGANSFGQ 243

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G   +Q     I   L G+++ +++AG SHSAA+ + G +Y WG G  G     +  
Sbjct: 244 LGIGTKNNQYEFTQI-NSLEGEQIVKIAAG-SHSAALNKKGEMYIWGTGVFGEYLFPNKI 301

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           +RH+    T  SD+   S G      +  +G  VW+ G+ + G+LG  D    T P+ ++
Sbjct: 302 NRHSSG--TTFSDI---SVGNFFAAAVDING-AVWTWGANSNGELGQGDYEPKTLPQTLQ 355

Query: 421 ALRKFRVRKVCAGTSFSVALTW 442
           AL+   V+K+C G  F++AL +
Sbjct: 356 ALKGRHVQKICCGGGFAMALGY 377



 Score = 87.0 bits (214), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLG--HGDLKSRHTPTLVTELSDVG--AVSCGES 382
           VS G  HSA +T+ G +YT G  + G+LG     + S  TP LV +LS +   ++SCG+S
Sbjct: 63  VSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKSITSSSTPCLVEDLSKIKCLSLSCGQS 122

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           HT+ + Q+G  V+  G G+ G+LG+        P  I +     ++  C G+  ++ L  
Sbjct: 123 HTIAVMQNGE-VYGWGDGSYGQLGNGSQESRFAPTRIVSENNEFIQVQC-GSRHTILLDL 180

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
               +  G      LGLRS+ I     + +  L +   ++ + G  H L L +   VY+ 
Sbjct: 181 KKKAYVCGSNENGQLGLRSTKI----ELFIKKLDNKGFIEAACGQFHSLLLDEQGRVYST 236

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           G+N+ GQ G    +N  +  +++  LE   + +I AGS
Sbjct: 237 GANSFGQLGIGTKNNQYE-FTQINSLEGEQIVKIAAGS 273


>gi|147919953|ref|YP_686293.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
 gi|110621689|emb|CAJ36967.1| predicted regulator of chromosome condensation [Methanocella
           arvoryzae MRE50]
          Length = 439

 Score =  122 bits (307), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 95/295 (32%), Positives = 140/295 (47%), Gaps = 23/295 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           I  I+ G   T +L + G +   G    G LG  N     +  ++P  + +  +      
Sbjct: 90  ISSIDGGYGYTVILRNDGTVWTSGNNDAGQLGQRNRADNAVFTQIPNMSNVARIDAG--- 146

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E HVL +  +G V+SWG    G+LG+G+      P  +MG + G R   ++AG  HS A 
Sbjct: 147 EGHVLALKVDGTVWSWGDNSFGQLGNGSKALTGEPARVMG-VQGIR--SIAAGGRHSIA- 202

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           T     Y WG+   G+LG G   S +TP  V  +++V  V+ GE H+L L +DG TVW+ 
Sbjct: 203 TYGMEAYAWGDNLFGQLGDGTYNSSNTPVKV-RINEVTDVAAGEYHSLALLEDG-TVWAW 260

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G  + G+LG         P     LR   V+ + A   +S+AL +DG V+ WG      L
Sbjct: 261 GGNDYGQLGDGIPNNSLVPVKCGNLRN--VKTIAASDRYSLALKYDGTVWAWGYNGNGVL 318

Query: 452 GLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           G  S+    H  PV V GL  + I  +    +  +A+  Y  V+ WG N  GQ G
Sbjct: 319 GTGSADNERHPEPVQVKGL--YDIKKIYAAPTGCMAIDTYGNVWVWGMNQFGQLG 371



 Score =  111 bits (277), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 24/268 (8%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM-------GGLYGKRVTQVSAGHSHSAA 336
           + ++G +++WG   +G+LG G  +++  P LI        G L G  ++ +  G+ ++  
Sbjct: 45  IKNDGSLWAWGNNNNGQLGDGTYINRLVPVLIKDYTDLLGGNLIG--ISSIDGGYGYTVI 102

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  DG ++T G  D G+LG  +       T +  +S+V  +  GE H L L  DG TVWS
Sbjct: 103 LRNDGTVWTSGNNDAGQLGQRNRADNAVFTQIPNMSNVARIDAGEGHVLALKVDG-TVWS 161

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
            G  + G+LG+        P  +  ++   +R + AG   S+A T+    + WG  L   
Sbjct: 162 WGDNSFGQLGNGSKALTGEPARVMGVQG--IRSIAAGGRHSIA-TYGMEAYAWGDNLFGQ 218

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
               +  S +TPV V     +++ DV+ G+ H LAL +   V+AWG N  GQ G D   N
Sbjct: 219 LGDGTYNSSNTPVKV---RINEVTDVAAGEYHSLALLEDGTVWAWGGNDYGQLG-DGIPN 274

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               P K   L +  V+ I A   +S+A
Sbjct: 275 NSLVPVKCGNLRN--VKTIAASDRYSLA 300



 Score = 61.2 bits (147), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 6/189 (3%)

Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           G   I+    + Y WG NL  Q+ D      + P ++   + +  + AG++ +  L   G
Sbjct: 197 GRHSIATYGMEAYAWGDNLFGQLGDGTYNSSNTP-VKVRINEVTDVAAGEYHSLALLEDG 255

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAA-IVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            +  +G    G     I P    VP++   + ++     S+ + L +  +G V++WG   
Sbjct: 256 TVWAWGGNDYGQLGDGI-PNNSLVPVKCGNLRNVKTIAASDRYSLALKYDGTVWAWGYNG 314

Query: 298 HGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +G LG G+  ++R P+ + + GLY   + ++ A  +   A+   G ++ WG    G+LG 
Sbjct: 315 NGVLGTGSADNERHPEPVQVKGLYD--IKKIYAAPTGCMAIDTYGNVWVWGMNQFGQLGD 372

Query: 357 GDLKSRHTP 365
           G    R++P
Sbjct: 373 GTKTDRYSP 381


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 173/384 (45%), Gaps = 29/384 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLV 242
           VA   V TWG N   Q+ D      S P    LP+   I  I      +F L STG +L 
Sbjct: 51  VASDTVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLA 110

Query: 243 YGK---GWLGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           +G    G LG    T    P+  ++P    + +++V      H L +TS G + +WG   
Sbjct: 111 WGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTF---HTLALTSTGALLAWGGNG 167

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G+LG G T ++  P + +    G  +T ++ G  HS A+T  G +  WG+ + G+LG G
Sbjct: 168 FGELGDGTTTARNEP-VPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDG 226

Query: 358 DLKSRHTPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
              +  TP  V     + V A++ G S++  L+  G TV + G  + G++G   T   +T
Sbjct: 227 TNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAG-TVLAWGLNSSGQVGDGTTTDRST 285

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLS 470
           P  ++      V  +  G   SVALT  G V  WGL         ++    TPV V    
Sbjct: 286 PVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVNLPP 345

Query: 471 SHQIVDVSIGD-SHVLALSQYNEVYAWGSNTMGQCGQD---NFSNPVDQPSKVVGL-EDV 525
              I  ++  D SH LAL+    + AWG N+ G+ G     N S PVD     V L    
Sbjct: 346 DTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRSTPVD-----VNLPPGT 400

Query: 526 CVRQICAGSLFSIAYTVPPSNSAL 549
            V  I  G   S+A T PP+++ L
Sbjct: 401 TVTAIDNGDDHSMALTAPPTSTTL 424



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 13/199 (6%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV--TELSDVGAVSCGESHT 384
            +A H+ S +      + TWGE D G+LG G      TP  V     + + A++  ++++
Sbjct: 40  AAAQHAPSPSGVASDTVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANS 99

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
             L+  G  V + G+   G+LG       TTP  ++      V  +  GT  ++ALT  G
Sbjct: 100 FALTSTGA-VLAWGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTG 158

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            +  WG      LG   ++ + + PV V   +   I  ++ G  H LAL+    V AWG 
Sbjct: 159 ALLAWGGNGFGELG-DGTTTARNEPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGK 217

Query: 499 NTMGQCGQD---NFSNPVD 514
           N  GQ G     N + PVD
Sbjct: 218 NNEGQLGDGTNANSTTPVD 236



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 83/195 (42%), Gaps = 11/195 (5%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNI--GDTDISVA---HSKVYTWGCNLHHQILDEVRGK 208
           LGD  ++NS T +D    P  T     G    S A      V  WG N   Q+ D     
Sbjct: 223 LGDGTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGTTTD 282

Query: 209 CSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP 263
            S P    LP  + +  I  G+  +  L S G +L +G    G LG   TT    P  V 
Sbjct: 283 RSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVN 342

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           L       +++    +H L +TS G + +WG+   G+LG G T ++  P + +    G  
Sbjct: 343 LPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRSTP-VDVNLPPGTT 401

Query: 324 VTQVSAGHSHSAAVT 338
           VT +  G  HS A+T
Sbjct: 402 VTAIDNGDDHSMALT 416


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 124/245 (50%), Gaps = 20/245 (8%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQ---RRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           + V S G+VY+WG GE G+LG G    +   R P+ + G L    V  V+ G  H  A+T
Sbjct: 98  VVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKG-LGNAFVISVACGTRHCLALT 156

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG-HTVWSM 397
            DG +++WGEG  G+LG G   SRH+P ++ +L   G VS     T  L+  G   V++ 
Sbjct: 157 RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAF 216

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           GS + G+LG  DT     P ++  L   +V  V AG   ++A T  G ++ WG      L
Sbjct: 217 GSNSKGQLGVGDTTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQL 276

Query: 452 GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLAL--------SQYNEVYAWGSNTMG 502
           GL S + S   P  +T  L   ++++VS G  H +AL        +Q     A+G+N  G
Sbjct: 277 GLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTG 336

Query: 503 QCGQD 507
           Q G D
Sbjct: 337 QLGLD 341



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 139/276 (50%), Gaps = 25/276 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEH---GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           H L +T  G VY+ G  +    G+ G  +  ++  P   +  + G      + G   S  
Sbjct: 46  HSLAITRSGTVYTTGKNDRRQLGRSGDEHKWARVTPLETITAVAG------AVGLDFSVV 99

Query: 337 VTEDGLLYTWGEGDHGRLGHG----DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQD 390
           V   G +YTWG G+ G+LG G    +  SR  P  V  L +  V +V+CG  H L L++D
Sbjct: 100 VDSTGKVYTWGGGERGQLGLGREAMETGSR-VPRPVKGLGNAFVISVACGTRHCLALTRD 158

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  V+S G G  G+LG        +P+VI  LR   V  V AG+++S+A+T    V+ +G
Sbjct: 159 GR-VFSWGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFG 217

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                 LG+  ++  F  P LV  L   Q+  V+ GD H LA ++   +YAWGSN  GQ 
Sbjct: 218 SNSKGQLGVGDTTARFR-PTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQL 276

Query: 505 GQDNFSNPVDQPSKVVGLEDVC-VRQICAGSLFSIA 539
           G  + ++ V  P+++  + ++  V ++ AG   ++A
Sbjct: 277 GLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVA 312



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 18/264 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V  WG    G+LG G+     + ++ +     + +  V+ G+ HS A+T  G +YT G+ 
Sbjct: 3   VAVWGATGAGQLGIGDADGTGKTRVTLVPSLEQELAFVATGYYHSLAITRSGTVYTTGKN 62

Query: 350 DHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           D  +LG  GD    H    VT L  + AV  + G   ++V+   G  V++ G G  G+LG
Sbjct: 63  DRRQLGRSGD---EHKWARVTPLETITAVAGAVGLDFSVVVDSTGK-VYTWGGGERGQLG 118

Query: 407 ----HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSS 457
                 +TG    P+ ++ L    V  V  GT   +ALT DG VF WG G          
Sbjct: 119 LGREAMETGS-RVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQF 177

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
           +S H+P ++  L    +V V+ G ++ LA++  ++VYA+GSN+ GQ G  + +    +P+
Sbjct: 178 VSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTTARF-RPT 236

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            V  L+   V  + AG   ++A T
Sbjct: 237 LVRFLDGKQVCHVTAGDFHTLART 260


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 210/477 (44%), Gaps = 50/477 (10%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQIL 202
           LV    +N++   D +S+ +  D      PKL  + G    + +   ++ WG ++  ++ 
Sbjct: 155 LVNRVKNNLR---DIRSAETIKDQRIIQMPKLKQSEGSNAATDSLKDIFVWG-DVLGRMS 210

Query: 203 DEVR---GKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTT 254
           D         S PRL   S   N++ I  G+    ++   G +  +G+   G LG   + 
Sbjct: 211 DHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSD 270

Query: 255 IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-- 312
               PK +   A+    +++  ++ +   V+  GE+Y WG G H  LG G    QR P  
Sbjct: 271 SVSDPKIIDSLASTPVKTIAFGAK-YTCAVSVSGELYEWGEGIHS-LGFGKNQCQRSPWF 328

Query: 313 --KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
             KLI     G  V +++ G  H+A ++  G LYT+G G  G LGHGD  S   P  V  
Sbjct: 329 PHKLISTS-DGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVES 387

Query: 371 L--SDVGAVSCGESHTLVL---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           L  S   +V+CG  HT  +         S  G  +++ G    GKLGH +      P  +
Sbjct: 388 LRGSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRV 447

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---GLRSSSISFHTPV-LVTG-LSSHQI 474
           E+L      +V  G S +  LT  G+VF  G    G   +S S +T + +V G L +  +
Sbjct: 448 ESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFV 507

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICA 532
            D+S G SHV  L+   +V+ WG  T GQ G  ++   VD+  P+ V  LED  V  I  
Sbjct: 508 KDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDY---VDRSSPTLVEALEDKQVDSIAC 564

Query: 533 GSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCS 589
            S F+    V   +  +SS    +C   R     L   F  +   C+  G    FC+
Sbjct: 565 SSNFTAVTCV---HREISSKDQSVCSSCR-----LAFRFTRKKHNCYNCGSM--FCN 611


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 150/327 (45%), Gaps = 42/327 (12%)

Query: 258 LPKRVPL------EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
           LP + PL      +  I+ +S   C   H L ++  G+V SWG  + G+LGH       +
Sbjct: 76  LPTKRPLLIPELQDYVIIQIS---CGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQ 132

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG---DLKSRHTPTLV 368
              ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG     DL   + P  +
Sbjct: 133 LPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRL 192

Query: 369 TELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D      P  ++ LR   
Sbjct: 193 TTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGD 481
           VR V  G  FSV LT +G VF  G G         S +   P +V  L    I  V+ G+
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGN 311

Query: 482 SHVLAL-SQYNEVYAWGSNTMGQCGQDNFSN---------PVDQPSKVVGLE------DV 525
            H LAL      VYA+G  + GQ G  +  +         P   PS    L+       V
Sbjct: 312 RHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGPWVSPSGSALLQSKDAKVSV 371

Query: 526 CVRQICAGSLFSIAYT------VPPSN 546
            +RQI +G   SI  T      VPP +
Sbjct: 372 VIRQIFSGGDQSIVTTTLFMEKVPPED 398



 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 135/271 (49%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P  I        V QV+ GH H+  +T +G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVEQVACGHRHTLFLTANG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  DH +LGH DL ++  P L+ EL D  +  +SCG  H+L LS  G  V S G 
Sbjct: 60  KVYACGSNDHSQLGH-DLPTKR-PLLIPELQDYVIIQISCGSRHSLALSDWGQ-VLSWGD 116

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LGH  D   +  PKV+  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + S     H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G ++ +
Sbjct: 177 VNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N    P+++  L  + VR +  G  FS+  T
Sbjct: 237 NRA-YPTQLKTLRTLGVRFVACGDEFSVFLT 266


>gi|428671737|gb|EKX72652.1| Regulator of chromosome condensation RCC1 domain containing protein
           [Babesia equi]
          Length = 1655

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 168/358 (46%), Gaps = 53/358 (14%)

Query: 190 VYTWGCNLH-HQILDEVRGKCSR-PRL-QSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +Y WG ++   Q  D +    S  P++ + L S   +I +G +   ++++ G LL +G G
Sbjct: 346 IYQWGYSIGLSQTHDGLSSNVSYIPQIIKELGSKNVYITSGPYSCAVVNAFGDLLTWGIG 405

Query: 247 W---LGLANTTIQPLPKRVP-----LEAAIVSLSVSKCSE-------------------- 278
               LG  NT     PK VP     +   ++S   +K  E                    
Sbjct: 406 QNFRLGHGNTNDYAKPKFVPELRNGVNIDMISEESAKLEEEAEESTKKRNLYDERRIQQI 465

Query: 279 ----AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
               AH + VT  G VY+WGV             +   +  +   +  ++ +++ G +H+
Sbjct: 466 SVGDAHGVFVTCNGTVYTWGVNNGTGYNTSKDPLENYTEPCLLNSFSSKIKRIACGSNHT 525

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH-- 392
            AVT +GLL++WG  D+G+LG GDL+SR  P  VT + +   V  G  ++  +S   H  
Sbjct: 526 LAVTVNGLLFSWGCNDNGQLGLGDLRSRVFPEHVTSIENAINVYAGVDNSCCISSSSHEE 585

Query: 393 -------TVWSMGSGNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
                  T+W  GS   GKLG  +  +  V TP+ I ++    + KV  G+  ++ALT D
Sbjct: 586 FINDEYGTMWMFGSSCGGKLGLGEGFSSSVMTPREIRSISG--ILKVALGSIHTIALTHD 643

Query: 444 GLVFWWGLG----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           GL++  G G    L + SIS ++ V     +  + +DV++G SH LA+S  N +Y WG
Sbjct: 644 GLLYSCGAGTSGRLGTGSIS-NSLVFTLVQTDVKFIDVAVGSSHSLAISLDNNLYGWG 700



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 146/332 (43%), Gaps = 51/332 (15%)

Query: 258 LPKRVPLEAAIV---SLSVSKCSEAHVLT------------VTSEGEVYSWGVGEHGKLG 302
           +  RVP   A+    SL +S+ S  H L+              S   V SWG      LG
Sbjct: 9   IASRVPEIVALGLNHSLCISRGSATHSLSKNKDYSSKFNNSTGSYKNVLSWGKISFNCLG 68

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT--------EDGLLYTWGEGDHGRL 354
            G  ++      ++    GK V QVS G  HSA +           G ++T+G G++GRL
Sbjct: 69  QGVNVATSESPGVVPFFTGKNVVQVSCGDYHSAVLVVPNNRDHKSPGTVFTFGLGNNGRL 128

Query: 355 GH---GDLKSRHTPTLVTELS-----------------DVGAVSCGESHTLVLSQDGHTV 394
           G+    D + R   +   E S                  V +VSCG +HTL+ + +G ++
Sbjct: 129 GYYIDDDSERRKEKSDTDEPSWCTPVPQPVGLSIGLKNAVTSVSCGANHTLITTSNG-SL 187

Query: 395 WSMGSGNLGKLGHEDTGKVTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +S G G  G LG  +     TP   V  +  +  +    AG+  SVAL  DG V+ WG G
Sbjct: 188 YSWGIGAFGVLGTGNINNNFTPSKVVFNSNAEVFITTCVAGSRHSVALDRDGRVWSWGYG 247

Query: 453 LRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                    + S+++P ++     ++I  +S GDSH   + ++  VY WGS   GQ G  
Sbjct: 248 GNGRLGLGNTKSYYSPAMIKIFGGYEISFISCGDSHTACIDRFGSVYTWGSAKSGQLGLG 307

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              + V +P+ V  L    + Q+  G+ +++A
Sbjct: 308 KILSDVLEPTIVESLSGTPITQVSCGTGYTLA 339



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 43/294 (14%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +S   C ++H   +   G VY+WG  + G+LG G  LS      I+  L G  +TQVS G
Sbjct: 274 ISFISCGDSHTACIDRFGSVYTWGSAKSGQLGLGKILSDVLEPTIVESLSGTPITQVSCG 333

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR--HTPTLVTELSDVGA-VSCGESHTLVL 387
             ++ A++  G +Y WG        H  L S   + P ++ EL      ++ G     V+
Sbjct: 334 TGYTLALSSSGSIYQWGYSIGLSQTHDGLSSNVSYIPQIIKELGSKNVYITSGPYSCAVV 393

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR------------------------ 423
           +  G  + + G G   +LGH +T     PK +  LR                        
Sbjct: 394 NAFGD-LLTWGIGQNFRLGHGNTNDYAKPKFVPELRNGVNIDMISEESAKLEEEAEESTK 452

Query: 424 ------KFRVRKVCAGTSFSVALTWDGLVFWWGL----GLRSSSI---SFHTPVLVTGLS 470
                 + R++++  G +  V +T +G V+ WG+    G  +S     ++  P L+   S
Sbjct: 453 KRNLYDERRIQQISVGDAHGVFVTCNGTVYTWGVNNGTGYNTSKDPLENYTEPCLLNSFS 512

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
           S +I  ++ G +H LA++    +++WG N  GQ G  +  + V  P  V  +E+
Sbjct: 513 S-KIKRIACGSNHTLAVTVNGLLFSWGCNDNGQLGLGDLRSRV-FPEHVTSIEN 564



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 68/381 (17%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKG 246
           VYTWG     Q+ L ++      P + +SL    I  +  G   T  L S+G +  +G  
Sbjct: 293 VYTWGSAKSGQLGLGKILSDVLEPTIVESLSGTPITQVSCGTGYTLALSSSGSIYQWGYS 352

Query: 247 WLGLANT------TIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
            +GL+ T       +  +P+ +  L +  V ++    S A    V + G++ +WG+G++ 
Sbjct: 353 -IGLSQTHDGLSSNVSYIPQIIKELGSKNVYITSGPYSCA---VVNAFGDLLTWGIGQNF 408

Query: 300 KLGHGNTLSQRRPKLI----------------------------MGGLYG-KRVTQVSAG 330
           +LGHGNT    +PK +                               LY  +R+ Q+S G
Sbjct: 409 RLGHGNTNDYAKPKFVPELRNGVNIDMISEESAKLEEEAEESTKKRNLYDERRIQQISVG 468

Query: 331 HSHSAAVTEDGLLYTWG--EGDHGRLGHGDLKSRHTPTLVTELSD-VGAVSCGESHTLVL 387
            +H   VT +G +YTWG   G         L++   P L+   S  +  ++CG +HTL +
Sbjct: 469 DAHGVFVTCNGTVYTWGVNNGTGYNTSKDPLENYTEPCLLNSFSSKIKRIACGSNHTLAV 528

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD---- 443
           + +G  ++S G  + G+LG  D      P+ + ++       V AG   S  ++      
Sbjct: 529 TVNG-LLFSWGCNDNGQLGLGDLRSRVFPEHVTSIEN--AINVYAGVDNSCCISSSSHEE 585

Query: 444 ------GLVFWWG------LGL-RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
                 G ++ +G      LGL    S S  TP  +  +S   I+ V++G  H +AL+  
Sbjct: 586 FINDEYGTMWMFGSSCGGKLGLGEGFSSSVMTPREIRSISG--ILKVALGSIHTIALTHD 643

Query: 491 NEVYAWGSNTMGQCGQDNFSN 511
             +Y+ G+ T G+ G  + SN
Sbjct: 644 GLLYSCGAGTSGRLGTGSISN 664



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 41/291 (14%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIR---------HIEAGQFCTFLLDSTGG 239
           +++WGCN + Q+ L ++R +     + S+ + I           I +     F+ D  G 
Sbjct: 534 LFSWGCNDNGQLGLGDLRSRVFPEHVTSIENAINVYAGVDNSCCISSSSHEEFINDEYGT 593

Query: 240 LLVYGK---GWLGLANTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           + ++G    G LGL       +  P+ +   + I+ +++      H + +T +G +YS G
Sbjct: 594 MWMFGSSCGGKLGLGEGFSSSVMTPREIRSISGILKVALG---SIHTIALTHDGLLYSCG 650

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G  G+LG G+  +     L+   +   +   V+ G SHS A++ D  LY WGEG +  +
Sbjct: 651 AGTSGRLGTGSISNSLVFTLVQTDV---KFIDVAVGSSHSLAISLDNNLYGWGEGKYLPI 707

Query: 355 GHGD-------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG- 406
             GD       + +  +P+ V ++S V A SC  +HTLVL++ G+ V + G    G+LG 
Sbjct: 708 -DGDEILVPTMISTLPSPSGVCKVSSVVA-SC--NHTLVLARSGYIV-AWGDNKFGQLGI 762

Query: 407 -----HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                H  T  +T P ++  L +     +     FSV     G  F WGL 
Sbjct: 763 KTASNHSATDFITVPSIV--LLEDSAVSIATSKYFSVCYNSKGDAFAWGLA 811


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 146/285 (51%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+  V  +CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +  + ++P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  F  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  T     +P+ +     I  + ++ C   H L ++   EV+SWG  +HG+LG G 
Sbjct: 115 QLGLPGTEEYIRVPRNIKSLTDIQIVQIA-CGYYHSLALSKGSEVFSWGQNKHGQLGLGF 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L ++    ++  L G   TQV+AG +HS  +T  G ++ WG    G+LG  D   R  P
Sbjct: 174 ELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +  C     S  +   G ++ +GLG
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 121/264 (45%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + + G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  +V  P+ I++L   ++ ++  G   S+AL+    VF WG      LGL    
Sbjct: 118 LPGTEEYIRV--PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L       V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRFVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  +      P  +  L+  QIV ++ G  H LALS+ +EV++WG N  GQ G       
Sbjct: 118 LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKR 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QSSPQLIKSLLGIPFTQVAAGGAHSFVLTL 207



 Score = 48.9 bits (115), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 88.2 bits (217), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 48.1 bits (113), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 146/283 (51%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +   GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           HS A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ 
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 125/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT +G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGA 268

Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score = 99.0 bits (245), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 109/224 (48%), Gaps = 15/224 (6%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + E G +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LGH   +  + P  +  L+D  +  V+CGESH+L LS  G  ++S G+G+ G+LG  
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQ-LFSWGAGSDGQLGLT 119

Query: 409 DT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
            T   V  P++I+ L +  + +V  G    +AL  DG  F WG      LGL     S  
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L + G  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEGGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
           T  DS + P+L   +    I              A  + +TWG N H Q  +  E   + 
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179

Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           S  R++SL    +  + AG   +F L  +G +  +G    G LGL++   +  P  V L 
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
                + +S C E H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297

Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           Q++ G  H+ A V   GL+Y +G G  G+LG G   +   P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L   GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 147/333 (44%), Gaps = 20/333 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCS---RPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++ WG   HH++  E  G      +P L      S+I+ I AG+F T  L + G L   G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIV---SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              +G             P+        +LS   C   H + +   G+ +SWG    G+L
Sbjct: 61  SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQL 120

Query: 302 GHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           G    + +Q +PK+I   L  K V QV+ G  H+  +T +G LY WG   +G+ G G+  
Sbjct: 121 GSNLGSHAQDKPKIIKT-LATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRS 179

Query: 361 SRH-TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
           ++  TP  ++ +    +  ++CG +HT  LSQ G  V+  G  + G+LG +D      P 
Sbjct: 180 NKETTPQALSSILGIPIALIACGSNHTFALSQSG-AVFGWGKNSHGQLGLQDRESRCYPT 238

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT-----PVLVTGLSSH 472
            ++ LR  +V  +  G  F+  LT DG VF  G G    +   +T     P  V  L   
Sbjct: 239 HLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGS 298

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +  V+ G  H+L       + A G    GQ G
Sbjct: 299 TVTQVACGRRHMLCRVG-ERILACGYGARGQLG 330



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 13/209 (6%)

Query: 343 LYTWGEGDHGRL-----GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           ++ WG   H  L     G+ DL  + T +   E S +  +S GE HTL LS +GH +++ 
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGH-LYTC 59

Query: 398 GSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGL 453
           GS  +G+LG + ++   T+P +++  +   +  +  G   S+AL   G  F WG   +G 
Sbjct: 60  GSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQ 119

Query: 454 RSSSISFHT---PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
             S++  H    P ++  L++  ++ V+ G  H + L+   ++YAWG+N+ GQCG  N S
Sbjct: 120 LGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRS 179

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           N    P  +  +  + +  I  GS  + A
Sbjct: 180 NKETTPQALSSILGIPIALIACGSNHTFA 208


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 160/368 (43%), Gaps = 33/368 (8%)

Query: 193 WGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGK---GW 247
           WG N   ++ D      S P   ++P+   I  +  G   +  + S G  L +G    G 
Sbjct: 65  WGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQ 124

Query: 248 LGLANT---TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           LG   T   +  P+   VP    + +LS       H L VTS G   +WG    G+LG G
Sbjct: 125 LGDGTTIPSSSTPVAVDVPAGTTVTALSGGGV---HNLAVTSAGTALAWGDNFWGQLGDG 181

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +T   R P + +    G  +T V+AG  HS AVT  G    WG+   G+LG G       
Sbjct: 182 STTRSRTP-VAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDSSI 240

Query: 365 PTL--VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P    V   + + AV+ G  H+L L+  G  V + G+   G+LG   T   +TP  ++  
Sbjct: 241 PVAADVPAGTTITAVAAGGLHSLALTSGGD-VLAWGANGSGQLGDGTTTSSSTPVAVDVP 299

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               V  V AG   S+A+T  G V  WG      LG  S++ S  TPV V   +   I  
Sbjct: 300 AGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHS-STPVAVNVPAGTTITA 358

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-----PVDQPSKVVGLEDVCVRQIC 531
           V+ G  H LA++  +   AWG NT GQ G  + ++      VD P+         V  I 
Sbjct: 359 VATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAG------TTVTAIA 412

Query: 532 AGSLFSIA 539
            GS  S+A
Sbjct: 413 GGSFHSLA 420



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 132/305 (43%), Gaps = 12/305 (3%)

Query: 245 KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG   TT    P  V + A     +V+  +  H L VTS G   +WG    G+LG G
Sbjct: 70  AGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGA-GHSLAVTSAGTALAWGDNAFGQLGDG 128

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            T+      + +    G  VT +S G  H+ AVT  G    WG+   G+LG G      T
Sbjct: 129 TTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRT 188

Query: 365 PTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P  V     + + AV+ G+ H+L ++  G T  + G  + G+LG       + P   +  
Sbjct: 189 PVAVNVPAGTTITAVAAGQGHSLAVTSAG-TALAWGDNSSGQLGDGTATDSSIPVAADVP 247

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V AG   S+ALT  G V  WG      LG   ++ S  TPV V   +   +  
Sbjct: 248 AGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLG-DGTTTSSSTPVAVDVPAGTTVTA 306

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           V+ G  H LA++   +V AWG NT GQ G D  +     P  V       +  +  GS  
Sbjct: 307 VAAGGRHSLAVTSAGDVLAWGDNTAGQLG-DGSTTHSSTPVAVNVPAGTTITAVATGSGH 365

Query: 537 SIAYT 541
           S+A T
Sbjct: 366 SLAVT 370



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 125/296 (42%), Gaps = 21/296 (7%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLT-------VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKL 314
           VPL  AIV L V+    A VL            G   +WG    G+LG G T     P +
Sbjct: 28  VPLLVAIV-LGVTSVGAARVLAQGVPSAAAGPPGTGLAWGTNSAGRLGDGTTTDSSSP-V 85

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTL--VTEL 371
            +    G  +T V+ G  HS AVT  G    WG+   G+LG G  + S  TP    V   
Sbjct: 86  SVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPVAVDVPAG 145

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           + V A+S G  H L ++  G T  + G    G+LG   T +  TP  +       +  V 
Sbjct: 146 TTVTALSGGGVHNLAVTSAG-TALAWGDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVA 204

Query: 432 AGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
           AG   S+A+T  G    WG      LG  +++ S   PV     +   I  V+ G  H L
Sbjct: 205 AGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDS-SIPVAADVPAGTTITAVAAGGLHSL 263

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AL+   +V AWG+N  GQ G D  +     P  V       V  + AG   S+A T
Sbjct: 264 ALTSGGDVLAWGANGSGQLG-DGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVT 318



 Score = 68.6 bits (166), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 112/283 (39%), Gaps = 38/283 (13%)

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDG 391
           SAA    G    WG    GRLG G      +P  V     + + AV+ G  H+L ++  G
Sbjct: 53  SAAAGPPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAG 112

Query: 392 HTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAG-------TSFSVALTWD 443
            T  + G    G+LG   T    +TP  ++      V  +  G       TS   AL W 
Sbjct: 113 -TALAWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAW- 170

Query: 444 GLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           G  FW  LG  S++ S  TPV V   +   I  V+ G  H LA++      AWG N+ GQ
Sbjct: 171 GDNFWGQLGDGSTTRS-RTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQ 229

Query: 504 CGQDNFSN---PV--DQPSKVVGLEDVCVRQICAGSLFSIAYTVPP-------------S 545
            G    ++   PV  D P+         +  + AG L S+A T                 
Sbjct: 230 LGDGTATDSSIPVAADVPAG------TTITAVAAGGLHSLALTSGGDVLAWGANGSGQLG 283

Query: 546 NSALSSAFTPLCVDVRPH-TFTLIREFLEQYSACFETGDYIPF 587
           +   +S+ TP+ VDV    T T +        A    GD + +
Sbjct: 284 DGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAW 326


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 167/393 (42%), Gaps = 44/393 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
                   C     S  +   G ++ +GLG            L TG +S++    ++  +
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                      YA+     GQC  D     +D        E  CV++I +G   S ++  
Sbjct: 345 W----------YAYN----GQCLPD-----IDSE------EYFCVKRIFSGGDQSFSHYS 379

Query: 543 PPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
            P N      F   C D     +T+    ++++
Sbjct: 380 SPQNCGPPDDFR--CPDPTKQIWTVNEALIQKW 410



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KR+  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 139/283 (49%), Gaps = 23/283 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQS----LPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++ WGC+ ++Q+          P+L S    L + I  +  G      +DSTG L  +G 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LGL +    P P RV      V + V+ C       ++ + +V++WG G  G+LG
Sbjct: 240 CDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVT-CGMYSSACISHDMKVFTWGSGSKGQLG 298

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           H     +  P+ +   L+   + QV+ G+ H AA++ DG +YTWGEG+HG+LGHGDL S 
Sbjct: 299 HVEKSDEWLPRSV-AALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSC 357

Query: 363 HTP--------TLVTELSDVGA---VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            TP            E++DVG+   ++CG S TL+L+  G  + S G    G LG  +  
Sbjct: 358 STPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLI-SFGMSEFGALGLGEKR 416

Query: 412 KVTTPKVIEA--LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
               P +I +  + K R   + AG     A+T  G V+ WG G
Sbjct: 417 LAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQG 459



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 146/346 (42%), Gaps = 38/346 (10%)

Query: 248 LGLANTTIQPLPKRVP----LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           LG      QP PK V     L   I+ +S       H   + S G++++WG+ +HG+LG 
Sbjct: 191 LGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGA---DHGAAIDSTGKLFTWGLCDHGRLGL 247

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
            +      P  +   L  + +  V+ G   SA ++ D  ++TWG G  G+LGH +     
Sbjct: 248 KSGKDVPYPTRV-DFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEW 306

Query: 364 TPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI-- 419
            P  V  L  +    V+ G  H   LS DG  V++ G G  G+LGH D    +TPK +  
Sbjct: 307 LPRSVAALHHIPIVQVALGYEHMAALSLDG-DVYTWGEGEHGQLGHGDLNSCSTPKKLLL 365

Query: 420 -------EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
                  E         +  G S ++ LT  G +  +G      LGL    ++   P L+
Sbjct: 366 ELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAAR-PHLI 424

Query: 467 TG--LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ---DNFSNPVD--QPSKV 519
           T   +   + V +S GD H  A++    VY WG    G  G+     +SNP D  +P K 
Sbjct: 425 TSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYK- 483

Query: 520 VGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
             LE    ++ CA S     YTV  S             ++RP  +
Sbjct: 484 --LELPLDKRACATSCGG-NYTVILSKDGCVLVLGDDSTEIRPMLY 526



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 99/227 (43%), Gaps = 26/227 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           KV+TWG     Q+    +     PR    L  +P  I  +  G      L   G +  +G
Sbjct: 285 KVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHIP--IVQVALGYEHMAALSLDGDVYTWG 342

Query: 245 KG---WLGLANTTIQPLPKRVPLE--------AAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           +G    LG  +      PK++ LE        A + S  +  C  +  L +T  G + S+
Sbjct: 343 EGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISF 402

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKR-VTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           G+ E G LG G      RP LI   +  KR    +SAG  H AAVT  G +YTWG+G  G
Sbjct: 403 GMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFG 462

Query: 353 RLGHGDLKSRHTP-----TLVTEL---SDVGAVSCGESHTLVLSQDG 391
            +G    ++   P         EL       A SCG ++T++LS+DG
Sbjct: 463 AVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKDG 509



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 11/187 (5%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMG 398
           L+ WG   + +LG G  +++  P LV+ L+ +G     VS G  H   +   G  +++ G
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTG-KLFTWG 238

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
             + G+LG +    V  P  ++ L+   +  V  G   S  ++ D  VF WG G +    
Sbjct: 239 LCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLG 298

Query: 459 SFHT-----PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
                    P  V  L    IV V++G  H+ ALS   +VY WG    GQ G  +  N  
Sbjct: 299 HVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDL-NSC 357

Query: 514 DQPSKVV 520
             P K++
Sbjct: 358 STPKKLL 364


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                   C     S  +   G ++ +GLG
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 19/210 (9%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV++ G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVYTCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------G 452
             +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      G
Sbjct: 60  CNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           L  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G       
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKK 177

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              P  +  L  +   Q+ AG   S   T+
Sbjct: 178 QTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 48.1 bits (113), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 143/310 (46%), Gaps = 24/310 (7%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           +G G  GL     +  P    L+AA          E H L + +   V+S G    G+LG
Sbjct: 5   WGAGSRGLQRRRTEGSPGAELLQAA--------SGERHALLLLTNSSVHSCGENSRGQLG 56

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS- 361
                    P+ +   L   +   VS G  HS AV   G ++ WG G  G+LG G+ K  
Sbjct: 57  RRGAPRGDLPEPVQ-ALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI 115

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKV 418
             TP  +T L+ +    VSCG  H+L LS+D   V+S G  + G+LG  ++     +P+ 
Sbjct: 116 NFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQ-VFSWGKNSHGQLGLGKELSSQASPQR 174

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGLS 470
           + +L    V +V AG + S AL+  G  F WG        L  R+  +  + P+ +  L 
Sbjct: 175 VRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALK 234

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
           +  ++ +S GD H   LSQ  +V+ +G N+ GQ G +    P  +  ++V   D  V QI
Sbjct: 235 NLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYN--PTPKKRGPQIVERIDGLVSQI 292

Query: 531 CAGSLFSIAY 540
             G   +IAY
Sbjct: 293 DCGGDHTIAY 302



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 25/328 (7%)

Query: 185 VAHSKVYTWGCNLHHQI--LDEVRGKCSRP--RLQSLPSNIRHIEAGQFCTFLLDSTGGL 240
           + +S V++ G N   Q+      RG    P   L++L  N+  +  G+  +  +   G +
Sbjct: 39  LTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL--VSCGKEHSLAVCHKGRV 96

Query: 241 LVYG---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +G   +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG  
Sbjct: 97  FAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVS-CGHYHSLALSKDSQVFSWGKN 155

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL-- 354
            HG+LG G  LS +     +  L G  V QV+AG +HS A++  G  + WG    G+L  
Sbjct: 156 SHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLAL 215

Query: 355 -GHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            G       + P  +  L ++G   +SCG+ HT VLSQDG  V++ G  + G+LG+  T 
Sbjct: 216 SGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDG-KVFTFGDNSSGQLGYNPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTG--- 468
           K   P+++E +     +  C G      +   G V  +G G   +S   H   L      
Sbjct: 275 KKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGHGPSDTSKPTHPEALKENFDI 334

Query: 469 ---LSSHQIVDVSIGDSHVLALSQYNEV 493
              +S+  +VDV +   H+ A    N V
Sbjct: 335 RCLISADDLVDVQV--KHIFAGKYANFV 360



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           +SWG G  G       L +RR +    G  G  + Q ++G  H+  +  +  +++ GE  
Sbjct: 3   FSWGAGSRG-------LQRRRTE----GSPGAELLQAASGERHALLLLTNSSVHSCGENS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG         P  V  L       VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  ++  TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      N     ++P  +
Sbjct: 171 SPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSI 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVIYISCG 244



 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 17/208 (8%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           + ++WG G  G      L+ R T    +  +++   + GE H L+L  +  +V S G  +
Sbjct: 1   MYFSWGAGSRG------LQRRRTEG--SPGAELLQAASGERHALLLLTNS-SVHSCGENS 51

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS------ 455
            G+LG     +   P+ ++AL+  +   V  G   S+A+   G VF WG G         
Sbjct: 52  RGQLGRRGAPRGDLPEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE 111

Query: 456 -SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
              I+F TP  +T L+  +I+ VS G  H LALS+ ++V++WG N+ GQ G     +   
Sbjct: 112 FKEINF-TPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQA 170

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P +V  LE + V Q+ AG   S A ++
Sbjct: 171 SPQRVRSLEGIPVAQVAAGGAHSFALSL 198


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 142/263 (53%), Gaps = 18/263 (6%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  ++     PK++   +    +S+S  S  HVL VT +GE+Y+WG   + +LG+G T 
Sbjct: 54  LGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P L+   L GKRVT+VS G  HS A+T +G ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           V+       +  ++CG++ ++ ++ +G  V+  G    G+LG  + G   TP  + AL+ 
Sbjct: 174 VSNCLQNKVIVNIACGQTSSMAVTDNGE-VYGWGYNGNGQLGLGNNGNQLTPCRLIALQG 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVD 476
           F V ++ +G + S+ALT +GL++ WG         G +S+ +S   PV V      +IV+
Sbjct: 233 FCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS---PVQVM-TEKERIVE 288

Query: 477 VSIGDS-HV-LALSQYNEVYAWG 497
           ++   S H   A +Q  +VY WG
Sbjct: 289 IAACHSTHTSAAKTQSGQVYMWG 311



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 14/257 (5%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           ++I    +   S    + +T + EVY  G+     LG G++ S   PK  +  L GK++ 
Sbjct: 19  SSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKK-LDCLSGKKLI 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT---ELSDVGAVSCGE 381
            +S G   H   VTEDG LY WG   + +LG+G      +P LV+   +   V  VSCG 
Sbjct: 78  SLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H+L L+ +G  V++ G  N G++G   T    TP KV   L+   +  +  G + S+A+
Sbjct: 138 HHSLALTHEGE-VFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T +G V+ WG      LGL ++     TP  +  L    ++ ++ G +H LAL+    +Y
Sbjct: 197 TDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRLIALQGFCVLQIASGYAHSLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSN 511
           AWG+NT GQ G  N SN
Sbjct: 256 AWGANTYGQLGTGNKSN 272



 Score = 68.2 bits (165), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPR-LQSLPSN--IRHIEAGQFCTFLLDSTG---GLLV 242
           +V+ WG N   Q+          PR + +   N  I +I  GQ  +  +   G   G   
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGY 207

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            G G LGL N   Q  P R+        L ++    AH L +T EG +Y+WG   +G+LG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLIALQGFCVLQIAS-GYAHSLALTDEGLLYAWGANTYGQLG 266

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            GN  +Q  P  +M     +R+ +++A HS   SAA T+ G +Y WG+
Sbjct: 267 TGNKSNQLSPVQVM--TEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 168/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +       YN          GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 NWF----PYN----------GQC-----------PPDIDSEEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 SNPQNCGPPDDFR--CPDPSKQIWTVNETLIQKW 410



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 142/314 (45%), Gaps = 31/314 (9%)

Query: 276 CSEAHVLTVTSEGEVYSWG--VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   +T  GEVY+WG  V     L  G T SQ  P+ + G L G  ++ V+ G  H
Sbjct: 363 CGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWH 422

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL---- 387
           +A V+  G L+T+G+G  G LGHGDL+S  +P  V  LS   V + +CG  HT  +    
Sbjct: 423 TAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVM 482

Query: 388 ------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                 +     +++ G G+ G+LGH D G    P  +  L  +   +V  G   +VALT
Sbjct: 483 FDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALT 542

Query: 442 WDGLVFWWG---LGLRSSSISFHTPVLVTGLSSHQIVDV-SIGDSHVLALSQYNEVYAWG 497
             G VF  G    G   +  +    V+V G    + V V S G  HV  L+    VY WG
Sbjct: 543 NMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWG 602

Query: 498 SNTMGQCG----QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF 553
               GQ G    +D ++     P  V  L D  V  I  G  F+ A ++   +  +S + 
Sbjct: 603 RGENGQLGLGDTEDRYT-----PCFVEALRDRQVNTITCGPSFTAAISL---HKPISISD 654

Query: 554 TPLCVDVR-PHTFT 566
              C   R P  FT
Sbjct: 655 QSTCTGCRLPFGFT 668


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +PK++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   A I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGL 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  PKL+   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPKLLK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  L+  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 ASPKLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  PK +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 170/400 (42%), Gaps = 34/400 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVPLEAAIVSLSVSKC 276
           ++R I  G     L+   G +  +G+G  G     +      PK V     ++  SVS C
Sbjct: 308 DVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVS-C 366

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGK--LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E     +T  GE+Y+WG    G   +G     SQ  P  + G L G  ++ V+ G  H 
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHT-------- 384
           A V+  G L+T+G+G  G LGHG L+S   P  V  LS   V A +CG  HT        
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRA 486

Query: 385 --LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
             L  +  G  +++ G G+ G+LGH D  +   P  +  L      +V  G   +V LT 
Sbjct: 487 DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTC 546

Query: 443 DGLVFWWGLG----LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G V+  G      L +      +  +V G L    + ++S G  HV AL+    +Y WG
Sbjct: 547 LGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYTWG 606

Query: 498 SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
               GQ G  + +   + P+ V  L D  V  I  GS F+ A  +   + ++SS     C
Sbjct: 607 MGANGQLGLGD-TEDRNSPAVVEALRDRQVESIACGSGFTAAICL---HKSISSTDQSAC 662

Query: 558 VDVRPHTFTLIREFLEQYSACFETGDYIPFCSKVTHAQFI 597
              R     +   F  +   C+  G  + FC   ++ + +
Sbjct: 663 SGCR-----MAFGFTRKKHNCYNCG--LLFCRACSNKKVL 695



 Score = 47.0 bits (110), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLS 470
           PK++E+     VR++  G   +  +T  G VF WG G         ++    P +V  L+
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLT 357

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
              +  VS G+    AL+   E+Y WG N  G
Sbjct: 358 GVLVKSVSCGEYQTCALTHSGELYTWGDNGSG 389


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +PK++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   A I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLADIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGL 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  PKL+   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPKLLK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  L+  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 ASPKLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 89.0 bits (219), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  PK +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 138/263 (52%), Gaps = 14/263 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LGL +T     P+R+ +      +S+S  +  HV+  T++GEVY+WG   + +LG+G 
Sbjct: 52  GCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGT 111

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P L+   L GKRVT+VS G  H+ A+T DG +Y WG  + G++G G   ++ TP
Sbjct: 112 TNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTP 171

Query: 366 TLVTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             V+       V  ++CG+  ++ +  +G T +  G    G+LG  + G   TP  I AL
Sbjct: 172 RRVSSCLQNKVVVNIACGQLCSMAVLDNGET-YGWGYNCNGQLGLGNNGNQQTPCRIAAL 230

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
           +   + +V  G + ++ALT +G V+ WG      LG  + S +   P L+  +   ++V+
Sbjct: 231 QGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKS-NQAVPTLIN-MDKERMVE 288

Query: 477 V-SIGDSHV-LALSQYNEVYAWG 497
           V +   SH   A +Q  +V  WG
Sbjct: 289 VAACHTSHTSAAKTQSGQVLMWG 311



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 121/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
            + VT   EV++ G    G LG G+T S   P+ I   L GK++  +S G   H    T 
Sbjct: 34  AIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRI-DILCGKKIISLSYGTGPHVVIATA 92

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TEL--SDVGAVSCGESHTLVLSQDGHTVWS 396
           DG +Y WG   + +LG+G      TP LV T L    V  VSCG  HT+ L+ DG  V++
Sbjct: 93  DGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGE-VYA 151

Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T    TP+ V   L+   V  +  G   S+A+  +G  + WG     
Sbjct: 152 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNG 211

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL ++  +  TP  +  L    I+ V+ G +H LAL+    VY+WG+N+ GQ G  N 
Sbjct: 212 QLGLGNNG-NQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNK 270

Query: 510 SN 511
           SN
Sbjct: 271 SN 272



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 31/284 (10%)

Query: 129 QVDLIRSACLV-----YLILVTLADDNIK---------PLGDRKSSNSNTDIDSTSTPK- 173
           ++ LIR AC+        I VT+ D+             LGD +S+     ID     K 
Sbjct: 17  ELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKI 76

Query: 174 --LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAG 227
             L+Y  G    I+ A  +VY WG N + Q+ +        P L S   +   +  +  G
Sbjct: 77  ISLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCG 136

Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVL 282
              T  L + G +  +G    G +G  +T  QP P+RV   L+  +V ++++ C +   +
Sbjct: 137 SHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV-VNIA-CGQLCSM 194

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
            V   GE Y WG   +G+LG GN  +Q+ P  I   L G  + QV+ G++H+ A+T++G 
Sbjct: 195 AVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRI-AALQGINIIQVACGYAHTLALTDEGF 253

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHT 384
           +Y+WG   +G+LG G+  ++  PTL+    +  V   +C  SHT
Sbjct: 254 VYSWGANSYGQLGTGNKSNQAVPTLINMDKERMVEVAACHTSHT 297


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 143/294 (48%), Gaps = 20/294 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           PK  P  A      VS C   H + V +EG VY+ G  ++G+LG       +RP +I   
Sbjct: 25  PKEQPFGATKAMREVS-CGRQHTVFVLAEGTVYTCGSNDYGQLGQDK--GHKRPTVIT-A 80

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH----GDLKSRHTPTLVTELS-- 372
           L  + + QVS G  H+  V +   +++WG  D G+LGH    G   SR  P +V ELS  
Sbjct: 81  LDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRR-PRMVKELSSL 139

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            +  V+CG  H+L LS DG  ++S G+ + G+LG   T     P+ + +L      ++ A
Sbjct: 140 QIVQVACGGKHSLALSNDGR-IFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVA 198

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G S S  L+  G VF +G      LGL  +    + P  V  L S ++  +S G+ H   
Sbjct: 199 GGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY-PTHVKSLRSLKVTHISCGEEHTAV 257

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           L+    V  +G+ + GQ G  N +N    P KV  L  + V Q+  G + ++AY
Sbjct: 258 LTLDGGVLTFGAGSYGQLGH-NSNNHEALPRKVFELMGLEVTQLACGRMHTMAY 310



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 147/302 (48%), Gaps = 32/302 (10%)

Query: 260 KRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGH-----GNTLSQRRP 312
           KR  +  A+ + S+ +  C + H L V  + +V+SWG  + G+LGH     GN  + RRP
Sbjct: 73  KRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGN--NSRRP 130

Query: 313 KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           +++   L   ++ QV+ G  HS A++ DG +++WG   HG+LG G  K++  P  +T L+
Sbjct: 131 RMVKE-LSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLT 189

Query: 373 DVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
            +    +  G SH+ VLS+ G  V+  G    G+LG  DTG    P  +++LR  +V  +
Sbjct: 190 GIPFCQIVAGGSHSFVLSKSG-AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHI 248

Query: 431 CAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
             G   +  LT DG V  +G G       +S+     P  V  L   ++  ++ G  H +
Sbjct: 249 SCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTM 308

Query: 486 A-LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG----------LEDVC--VRQICA 532
           A +     +Y++G    GQ G    +N  + P  V G          LE+ C  V+ I A
Sbjct: 309 AYVESSGRIYSFGLGGNGQLGSKGTTN-CNTPITVDGPFVPFAGDNSLEEQCYVVQAITA 367

Query: 533 GS 534
           G 
Sbjct: 368 GG 369



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 126/257 (49%), Gaps = 19/257 (7%)

Query: 290 VYSWGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           ++ WG   +G+LG G         PK    G   K + +VS G  H+  V  +G +YT G
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGAT-KAMREVSCGRQHTVFVLAEGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D+G+LG    K    PT++T L    +  VSCG+ H LV++ D + V+S G  + G+L
Sbjct: 60  SNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVN-DKYQVFSWGYDDCGQL 116

Query: 406 GH--EDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           GH  E  G  +  P++++ L   ++ +V  G   S+AL+ DG +F WG      LG+ S+
Sbjct: 117 GHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGST 176

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             +   P  +T L+      +  G SH   LS+   V+ +G NT GQ G  + +     P
Sbjct: 177 K-NQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD-TGDRKYP 234

Query: 517 SKVVGLEDVCVRQICAG 533
           + V  L  + V  I  G
Sbjct: 235 THVKSLRSLKVTHISCG 251



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 15/292 (5%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLT-YNIGDTDISVAHSK--VYTWG---CN 196
           + T   ++   LG  K     T I +  T  +   + GD    V + K  V++WG   C 
Sbjct: 55  VYTCGSNDYGQLGQDKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCG 114

Query: 197 LHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLA 251
                L+       RPR+ + L S  I  +  G   +  L + G +  +G    G LG+ 
Sbjct: 115 QLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIG 174

Query: 252 NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
           +T  QP P+ +     I    +     +H   ++  G V+ +G    G+LG G+T  ++ 
Sbjct: 175 STKNQPKPQELTSLTGIPFCQIV-AGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKY 233

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL 371
           P  +   L   +VT +S G  H+A +T DG + T+G G +G+LGH        P  V EL
Sbjct: 234 PTHVKS-LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRKVFEL 292

Query: 372 S--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
              +V  ++CG  HT+   +    ++S G G  G+LG + T    TP  ++ 
Sbjct: 293 MGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDG 344


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 185/405 (45%), Gaps = 48/405 (11%)

Query: 190 VYTWGCNLHHQIL-----DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +Y WG N   Q+       EV         Q   S ++ +  G+  +  L   G LL  G
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKES-VQKVSIGEKHSLYLLKDGTLLSCG 59

Query: 245 K---GWLGLA--NTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           +   G LG    N+ I+ +     LEA  IV +S   C   H + +  EG +YSWG G  
Sbjct: 60  QNPYGQLGRKGNNSRIEQISS---LEAQTIVDVS---CGTNHSVAMCDEGNIYSWGDGSE 113

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG- 357
           G+LG G   S+      + GL  +++ Q+S G+ HS A+ EDG +++WG+   G+LG G 
Sbjct: 114 GQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGS 173

Query: 358 DLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            + ++ TP LV  L  +    V+ G S T  LS  G TV++ G  N G+LG ++  K  T
Sbjct: 174 QIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSG-TVFAWGRNNAGQLGFKNDAKKGT 232

Query: 416 --PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVT 467
             P  +++LR   V  +  G   +  L  DG+V+ +G      LG +S + +   P  + 
Sbjct: 233 FKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQT-SVPQKIE 291

Query: 468 GLSSHQIVDVSIGDSH-VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ---PSK----- 518
              S Q+  V+ G  H +L +   N + ++G  +  Q G D  S+  +    PS      
Sbjct: 292 EY-SRQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISS 350

Query: 519 ---VVGLEDVCVRQICAGSLFSIAYTVPPSNSA----LSSAFTPL 556
                 L+DV V+ I AG+    A +     +     LS  F P+
Sbjct: 351 LVPANDLKDVNVKWIFAGNNVGFAVSFSQQETTERILLSDTFKPI 395


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 158/350 (45%), Gaps = 21/350 (6%)

Query: 189 KVYTWGCNLHHQ-----ILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           ++Y WG   H Q     I DE     S+   Q   S +  I  G   T  L ++G +   
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQP-DSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 244 GKG-WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G   +  L +      P ++P E     ++   C   H + +T  G+V SWG  E G+LG
Sbjct: 61  GSNDYAQLGHELSSKRPLQIP-ELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLG 119

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HGDL 359
           H +     +    +  L  K V Q++ G++HS A+T  G LY WG   +G+LG     +L
Sbjct: 120 HASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPSEL 179

Query: 360 KSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
              + P L+T L    V A++CG +H+ ++S+    V+  G  N G+LG  D      P 
Sbjct: 180 GQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSS-AVFGWGRNNCGQLGLNDETNRAYPT 238

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSH 472
            ++ LR   VR V  G  FSV LT +G VF  G G           +   P +V  L   
Sbjct: 239 QLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGS 298

Query: 473 QIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            I  V+ G+ H LA+      +Y +G  + GQ G  N +  ++ P  V+G
Sbjct: 299 TISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRN-TKSLNLPQMVIG 347



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 5/151 (3%)

Query: 395 WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           W   S G LG  G ED  ++ TP  +       V ++  G   ++ LT  G V+  G   
Sbjct: 6   WGNASHGQLGLGGIEDE-QILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSND 64

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
                  +S   P+ +  L    I  ++ G  H +AL+++ +V +WG N  GQ G  +  
Sbjct: 65  YAQLGHELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQ 124

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + V  P  V  L    V QI  G+  S+A T
Sbjct: 125 DVVQLPKTVRALVSKTVVQIACGNNHSLALT 155


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 155/322 (48%), Gaps = 36/322 (11%)

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS------KCSEAHVLTVTSEGEV 290
           +  +GK   G LGL       + +   L+A  V L+ +       C   H + +  +G++
Sbjct: 1   MFAWGKAIEGQLGLGG-----IDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQI 55

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSA-GHSHSAAVTEDGLLYTWG 347
           YS G  ++G+ G      QR  K    +      R+T VS+ G +H+ A+ +   +Y WG
Sbjct: 56  YSCGSNDYGQTGR-----QRNNKRFARIDAFESMRITNVSSNGANHNLAINDKNCIYAWG 110

Query: 348 EGDHGRLGHGD--LKSRH-TPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNL 402
           +   G+LG  D  LK  + TP  +  LS    V  +CG+SH+L +  DG TV+S GS   
Sbjct: 111 DNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDG-TVFSWGSNRY 169

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G+LG +       PK I  L  F + ++ AG + S+A+T  G +  WG      LGL ++
Sbjct: 170 GQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTN 229

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                +P  V+ L S  I   + G+ H   L++   V+ +G+ + GQ G ++ S+    P
Sbjct: 230 D-GVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHC-SP 287

Query: 517 SKVVGLEDVCVRQICAGSLFSI 538
             VV L  + V QI  G  +++
Sbjct: 288 QMVVDLMGIVVTQITCGRFYAL 309



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 21/214 (9%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           ++ WG+   G+LG G       LK+ H    +T    +  +SCG +HT++L QDG  ++S
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVD--LTTNHTIKLISCGLNHTILLLQDGQ-IYS 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA-GTSFSVALTWDGLVFWWG----- 450
            GS + G+ G +   K      I+A    R+  V + G + ++A+     ++ WG     
Sbjct: 58  CGSNDYGQTGRQRNNKRFAR--IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDG 115

Query: 451 -LGLRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
            LG+   ++   + TP  +  LS   +V V+ G SH LA+     V++WGSN  GQ G D
Sbjct: 116 QLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGID 175

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +  + V +P +++ L    + QI AG   S+A T
Sbjct: 176 SNVSSV-EPKQILKLSGFYIVQIAAGGAHSLAIT 208



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)

Query: 190 VYTWGCNLHHQ--ILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +Y WG N   Q  + D+   +  R PR ++SL    +  +  GQ  +  + + G +  +G
Sbjct: 106 IYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWG 165

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG+ +      PK++   +    + ++    AH L +T+ G + +WG    G+L
Sbjct: 166 SNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIA-AGGAHSLAITNSGALLTWGKNSFGQL 224

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G       P  +   L  + +   + G  H+A +T++G ++T+G G  G+LGH  L  
Sbjct: 225 GLGTNDGVLSPTCV-SSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSH 283

Query: 362 RHTPTLVTELSD--VGAVSCGESHTL 385
             +P +V +L    V  ++CG  + L
Sbjct: 284 HCSPQMVVDLMGIVVTQITCGRFYAL 309



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR--LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V++WG N + Q+  +       P+  L+     I  I AG   +  + ++G LL +GK  
Sbjct: 161 VFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNS 220

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVS--LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            G LGL        P  V   +++ S  ++ + C E H   +T EG V+++G G  G+LG
Sbjct: 221 FGQLGLGTNDGVLSPTCV---SSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLG 277

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           H N+LS      ++  L G  VTQ++ G  ++    E  L YT
Sbjct: 278 H-NSLSHHCSPQMVVDLMGIVVTQITCGRFYALQQDEVSLDYT 319


>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
           CCMP2712]
          Length = 240

 Score =  121 bits (304), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 124/235 (52%), Gaps = 27/235 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS-----NIRHIEA--GQFCTFLLDSTGGLLV 242
           VYTWG N   Q+     G+    RL SLPS     N+  + A  G   T LL   G +  
Sbjct: 14  VYTWGANFFGQL-----GR-DYSRLWSLPSELHLPNVFVVSASCGGMHTLLLSKEGKVFS 67

Query: 243 YG---KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           +G    G LG  N     LP+ +  LE+  ++   +  +  H + +  +G++++WG G  
Sbjct: 68  FGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWT--HSMAIDDDGKLFTWGCGNA 125

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQV--SAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           G+LGHGN L   RP+ +   LY  R+  +  S  + HSA   E+G ++TWG G+HG+LG 
Sbjct: 126 GRLGHGNVLDVWRPRFV-DRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGV 184

Query: 357 GDLKSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           G  +S   P LV  ++D    +  VSCG +HT  ++ DG T+ + G G+ G+LGH
Sbjct: 185 GSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDG-TLLTWGRGDWGQLGH 238



 Score =  116 bits (291), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 13/235 (5%)

Query: 227 GQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT 283
           G +   L+   G +  +G    G LG   + +  LP  + L    V +S S C   H L 
Sbjct: 1   GPYHAALVSGLGDVYTWGANFFGQLGRDYSRLWSLPSELHLPNVFV-VSAS-CGGMHTLL 58

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           ++ EG+V+S+G G +G+LGHGN  +   P+ I   L  KR+T ++AG +HS A+ +DG L
Sbjct: 59  LSKEGKVFSFGDGANGRLGHGNCRNYSLPQPI-ASLESKRITFIAAGWTHSMAIDDDGKL 117

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGS 399
           +TWG G+ GRLGHG++     P  V  L  +       S    H+ V  ++G TVW+ G 
Sbjct: 118 FTWGCGNAGRLGHGNVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENG-TVWTWGL 176

Query: 400 GNLGKLGHEDTGKVTTPKVIEAL--RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           G  G+LG   T     P +++++      + +V  G + + A+T DG +  WG G
Sbjct: 177 GEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRG 231



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 81/170 (47%), Gaps = 26/170 (15%)

Query: 207 GKCSRPRLQSLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           G C   R  SLP  I  +E        AG   +  +D  G L  +G    G LG  N   
Sbjct: 79  GNC---RNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCGNAGRLGHGNVLD 135

Query: 256 QPLPK------RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
              P+      R+ ++A + S S       H       G V++WG+GEHG+LG G+T S 
Sbjct: 136 VWRPRFVDRLYRIRMKAMMASGSYD-----HSAVCCENGTVWTWGLGEHGQLGVGSTESH 190

Query: 310 RRPKLIMGGLYGK-RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
             P L+         + +VS G +H+AAVT DG L TWG GD G+LGHG+
Sbjct: 191 LEPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 47.8 bits (112), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (275), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + ++ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   V +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   QI AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNL-LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 48.1 bits (113), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 168/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +       YN          GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 NWF----PYN----------GQC-----------PPDIDSEEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 SNPQNCGPPDDFR--CPDPSKQIWTVNETLIQKW 410



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 189/404 (46%), Gaps = 49/404 (12%)

Query: 190 VYTWGCNLHHQIL-----DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           +Y WG N   Q+       EV         QS    ++ +  G+  T  L   G LL  G
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQEC-VQKVSCGEKHTLYLLEDGTLLSCG 59

Query: 245 K---GWLGLA--NTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           +   G LG    N++I+ +     LEA  IV +S   C   H + V+ EG +YSWG G  
Sbjct: 60  QNPYGQLGRKSNNSSIEQISS---LEAQTIVDIS---CGTNHSVAVSDEGSIYSWGDGSE 113

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG- 357
           G+LG GN  S+      + GL+  ++ Q+S G+ HS A++EDG +++WG+   G+LG G 
Sbjct: 114 GQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGS 173

Query: 358 DLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVT 414
            + ++ TP LV  L  +    V+ G S +  LS  G TV++ G  N G+LG + D  K T
Sbjct: 174 QIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSG-TVFAWGKNNAGQLGFKSDPMKGT 232

Query: 415 -TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVT 467
             P  + +LR   V  +  G   +  L+ DG V+ +G      LG  S + +   P  + 
Sbjct: 233 FKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQT-SVPQKIE 291

Query: 468 GLSSHQIVDVSIGDSH-VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV------- 519
             +  Q+  V+ G  H +L +   N + ++G  ++        S+  + PS+        
Sbjct: 292 DYAG-QVSQVACGRYHTLLYVFSCNRIVSFGKGSLRPQDNTECSDEAELPSEFDISSLVP 350

Query: 520 -VGLEDVCVRQICAGSLFSIAYTVPPSN------SALSSAFTPL 556
              L DV V+ I AG+  ++ + VP S       + LS  F P+
Sbjct: 351 TNDLRDVYVKWIFAGN--NVGFAVPFSQQEATKRTLLSDTFKPI 392


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+  V  +CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +    + P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  F  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  T     +P+ +     I  + ++ C   H L ++   EV+SWG  +HG+LG G 
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIA-CGYYHSLALSKGSEVFSWGQNKHGQLGLGF 173

Query: 306 TL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            L SQ  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R  
Sbjct: 174 ELKSQSAPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + + G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  KV  P+ I++L   ++ ++  G   S+AL+    VF WG      LGL    
Sbjct: 118 LPGTEEYIKV--PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            S   P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRFVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +      P  +  L+  QIV ++ G  H LALS+ +EV++WG N  GQ G        
Sbjct: 119 PGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 SAPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 49.3 bits (116), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  121 bits (304), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 91/268 (33%), Positives = 131/268 (48%), Gaps = 23/268 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           V +WG GE G+LG G    +     +   G Y   VT V AG  +S A+ EDG L+TWG 
Sbjct: 10  VLAWGSGEDGQLGMGGNEEKDWAHCVEALGSYA--VTAVVAGSRNSLAICEDGRLFTWGW 67

Query: 349 GDHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              G LGH    K+  +P  V  L+ +  V  + G  H L +  +GH  ++ G    G+ 
Sbjct: 68  NQRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHA-YAWGGNEYGQC 126

Query: 406 GHEDTGK----------VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
           G E   K          + TP+      K +VR+V AG + SV LT +G V+ WG     
Sbjct: 127 GEEPERKEDGTRALRRDIPTPQ--RCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPP 184

Query: 456 SSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             I    TPV V GL   ++  +++G  H LAL++   ++AWG+N  GQ G  + + P  
Sbjct: 185 GDIKQISTPVRVQGLEKVRV--IAVGAFHNLALTEDGILWAWGNNEYGQLGTGD-TQPRS 241

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P +V GL D+ +  I AG   S A T+
Sbjct: 242 HPIRVEGLSDLSLVDIAAGGWHSTALTI 269



 Score =  115 bits (289), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 117/247 (47%), Gaps = 34/247 (13%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLG------HGNTLSQRR---------PKLIMGGLYGKRV 324
           H L V   G  Y+WG  E+G+ G         T + RR         PKL        +V
Sbjct: 105 HCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKL--------KV 156

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHT 384
            QV+AG +HS  +T++G ++TWG+        GD+K   TP  V  L  V  ++ G  H 
Sbjct: 157 RQVAAGGTHSVVLTQEGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVRVIAVGAFHN 212

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L L++DG  +W+ G+   G+LG  DT   + P  +E L    +  + AG   S ALT  G
Sbjct: 213 LALTEDG-ILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQG 271

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            V+ WG      LG      S   P+ V  L+   IV VS G +H +AL++   ++++G 
Sbjct: 272 EVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGR 331

Query: 499 NTMGQCG 505
              G+ G
Sbjct: 332 GDHGRLG 338



 Score =  114 bits (286), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 30/279 (10%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           L +  +G +++WG  + G LGH   T ++  P  +   L G ++ Q + G  H  AV ++
Sbjct: 54  LAICEDGRLFTWGWNQRGTLGHPPKTKTESSPGPVHA-LAGLKIVQAAIGGWHCLAVDDN 112

Query: 341 GLLYTWGEGDHGRLGH-------GDLKSRH---TPTLVTELSDVGAVSCGESHTLVLSQD 390
           G  Y WG  ++G+ G        G    R    TP        V  V+ G +H++VL+Q+
Sbjct: 113 GHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQE 172

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           GH VW+ G          D  +++TP  ++ L K RV  +  G   ++ALT DG+++ WG
Sbjct: 173 GH-VWTWGQ----PWPPGDIKQISTPVRVQGLEKVRV--IAVGAFHNLALTEDGILWAWG 225

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                 LG   +    H P+ V GLS   +VD++ G  H  AL+   EVYAWG    G+ 
Sbjct: 226 NNEYGQLGTGDTQPRSH-PIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRL 284

Query: 505 --GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             G D  S  V    +++  ED+   Q+  G   S+A T
Sbjct: 285 GFGDDKSSRMVPLKVELLAGEDIV--QVSCGGTHSVALT 321



 Score =  101 bits (251), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 109/226 (48%), Gaps = 32/226 (14%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG       + ++    S P R+Q L   +R I  G F    L   G L  +G    
Sbjct: 175 VWTWGQPWPPGDIKQI----STPVRVQGL-EKVRVIAVGAFHNLALTEDGILWAWGNNEY 229

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG  +T  +  P RV     +  LS+   +    H   +T +GEVY+WG GEHG+LG 
Sbjct: 230 GQLGTGDTQPRSHPIRV---EGLSDLSLVDIAAGGWHSTALTIQGEVYAWGRGEHGRLGF 286

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+  S R   L +  L G+ + QVS G +HS A+T DG ++++G GDHGRLG+G   +  
Sbjct: 287 GDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKLTTG 346

Query: 364 TPTLV--------TELSDVGA-----VSCGESHTLVLSQDGHTVWS 396
            P  V        T  S  G      V+CG  HTL +      VW+
Sbjct: 347 QPMGVDIDLPPPKTRSSRDGQWQAKYVACGGRHTLAI-----VVWA 387


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 151/318 (47%), Gaps = 21/318 (6%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVS 274
           S +  +  G   T  L ++G +   G      LG    T +PL  ++P LE  +++    
Sbjct: 36  SAVNQVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPL--QIPELEDYVITQIA- 92

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            C   H + +T  G+V SWG  E G+LGH +     +   I+  L  K V Q++ G++HS
Sbjct: 93  -CGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHS 151

Query: 335 AAVTEDGLLYTWGEGDHGRLG---HGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQ 389
            A+T  G LY+WG   +G+LG     +L   + P  +T L  +   A++CG +HT ++S+
Sbjct: 152 LALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISK 211

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
               V+  G  N G+LG  D      P  ++ LR   VR V  G  FSV LT +G VF  
Sbjct: 212 SS-AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 270

Query: 450 GLGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQ 503
           G G         S +   P +V  L    I  V+ G+ H LAL      +Y +G  + GQ
Sbjct: 271 GAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQ 330

Query: 504 CGQDNFSNPVDQPSKVVG 521
            G  N +  ++ P  V+G
Sbjct: 331 LGTRN-TKSLNLPQVVIG 347



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 133/266 (50%), Gaps = 18/266 (6%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           E+Y WG   HG+LG G    ++   P  I        V QV+ GH H+  +T  G +Y  
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKP-DSAVNQVACGHRHTLFLTASGKVYAC 60

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G  D+ +LGH +L ++  P  + EL D  +  ++CG  H++ L++ G  V S G    G+
Sbjct: 61  GSNDYSQLGH-ELPTKR-PLQIPELEDYVITQIACGSRHSMALTEWGQ-VLSWGDNECGQ 117

Query: 405 LGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           LGH  D   +  PK++  L    V ++  G + S+ALT  G ++ WG      LG++S S
Sbjct: 118 LGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPS 177

Query: 458 --ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
                + P+ +T L       ++ G +H   +S+ + V+ WG N  GQ G ++ +N    
Sbjct: 178 ELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRA-Y 236

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYT 541
           P+++  L  + VR +  G  FS+  T
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLT 262



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 27/228 (11%)

Query: 164 TDIDSTSTPKLT-YNIGDTDISVA----HS-------KVYTWGCNLHHQI---LDEVRGK 208
           +D D    PK+  Y +  T + +A    HS       ++Y+WG N++ Q+         +
Sbjct: 122 SDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQ 181

Query: 209 CSRP-RLQSL---PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKR 261
           C+ P RL +L   P+    I  G   TFL+  +  +  +G+   G LGL + T +  P +
Sbjct: 182 CNYPMRLTTLLGIPAAA--IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQ 239

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           +      + +    C +   + +T+EG V++ G G +G+LGHG + ++  P+++M  L G
Sbjct: 240 LK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVM-ELMG 297

Query: 322 KRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
             ++QV+ G+ H+ A V   G +Y +G G  G+LG  + KS + P +V
Sbjct: 298 STISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 30/346 (8%)

Query: 189  KVYTWGCNLHHQI---LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
            +++TWG N   Q+   L+  + + +  R+++  S+ I  I  G   +  +D +  +  +G
Sbjct: 1052 ELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWG 1111

Query: 245  K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
                G LG    T Q LPK++        +       AH + +   G+++++G  + G+L
Sbjct: 1112 SSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQL 1171

Query: 302  GHGNTLSQRRPKLI----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
            G GN  ++  P  I    + G++G+R+T ++AGHSHS    ++G +Y+WG    G+LGHG
Sbjct: 1172 GLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHG 1231

Query: 358  DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            +++    P  + EL    +  +SCG  HT+ +S+  ++V+  G G    LG+       +
Sbjct: 1232 NIEKSLRPKQIDELKGKPIIKISCGHFHTVAISEL-NSVYCWGQGEHMCLGNGSNKNELS 1290

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTW------DGLVFWWGLG----------LRSSSIS 459
            PK+IE     ++ KV  G   +  +T        G V+  G G          L++    
Sbjct: 1291 PKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFD 1350

Query: 460  FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
               P ++  L+S  IV  S G      ++    +Y WG    GQ G
Sbjct: 1351 KPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNFGQIG 1396



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 22/259 (8%)

Query: 255  IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS--QRRP 312
            + P+P  V  E   VS++   C   H+  ++S+GE+++WG    G+LGHG  +   Q  P
Sbjct: 1021 LNPMPPLVKNEKKAVSVA---CGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTP 1077

Query: 313  KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
            + +        +  +S G  HS AV +   +Y+WG   +G+LGHG L  ++ P  + + +
Sbjct: 1078 RRVE-TFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFT 1136

Query: 373  ---DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE-----ALRK 424
                V A++ G +HT+VL + G  +++ G  + G+LG  +      P  IE      +  
Sbjct: 1137 GGQKVLAIATGYAHTMVLKKSG-DLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHG 1195

Query: 425  FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             R+  + AG S S+    +G ++ WG      LG  +   S   P  +  L    I+ +S
Sbjct: 1196 ERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLR-PKQIDELKGKPIIKIS 1254

Query: 479  IGDSHVLALSQYNEVYAWG 497
             G  H +A+S+ N VY WG
Sbjct: 1255 CGHFHTVAISELNSVYCWG 1273



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 36/346 (10%)

Query: 233  LLDSTGGLLVYG---KGWLG--LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
            ++ S G L  +G   +G LG  L     Q  P+RV    +   + +S C   H + V   
Sbjct: 1046 VISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS-CGGEHSVAVDQS 1104

Query: 288  GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
             ++YSWG   +G+LGHG    Q  PK I     G++V  ++ G++H+  + + G L+T+G
Sbjct: 1105 FQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFG 1164

Query: 348  EGDHGRLGHGDLKSRHTPTLVTELSDVG-------AVSCGESHTLVLSQDGHTVWSMGSG 400
              D G+LG G+ K+R  P  +     VG       A++ G SH+++   +G  ++S G+ 
Sbjct: 1165 WNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNG-DIYSWGAN 1223

Query: 401  NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RS 455
            + G+LGH +  K   PK I+ L+   + K+  G   +VA++    V+ WG G        
Sbjct: 1224 SKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNG 1283

Query: 456  SSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL------SQYNEVYAWGSNTMGQCGQDN- 508
            S+ +  +P ++    + +I  V  G  H   +      S    VY  G    G+ G    
Sbjct: 1284 SNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLGTGGD 1343

Query: 509  -----FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
                 F  P   P+ +  L  + +    +GS FS   T   +N AL
Sbjct: 1344 LKTPFFDKP--HPAVIPSLNSMNIVGFSSGSEFSAIIT---NNGAL 1384



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 19/234 (8%)

Query: 322  KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTEL--SDVGAV 377
            K+   V+ G  H A ++ DG L+TWG    G+LGHG    K + TP  V     S +  +
Sbjct: 1032 KKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMI 1091

Query: 378  SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF-RVRKVCAGTSF 436
            SCG  H++ + Q    ++S GS   G+LGH        PK IE      +V  +  G + 
Sbjct: 1092 SCGGEHSVAVDQS-FQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAH 1150

Query: 437  SVALTWDGLVFWWG------LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
            ++ L   G +F +G      LGL     R+  +   T  +V G+   +I  ++ G SH +
Sbjct: 1151 TMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIV-GIHGERITAIAAGHSHSI 1209

Query: 486  ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                  ++Y+WG+N+ GQ G  N    + +P ++  L+   + +I  G   ++A
Sbjct: 1210 MCLDNGDIYSWGANSKGQLGHGNIEKSL-RPKQIDELKGKPIIKISCGHFHTVA 1262



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 24/199 (12%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
            +Y+WG N   Q+      K  RP+    L+  P  I  I  G F T  +     +  +G+
Sbjct: 1217 IYSWGANSKGQLGHGNIEKSLRPKQIDELKGKP--IIKISCGHFHTVAISELNSVYCWGQ 1274

Query: 246  G---WLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTS------EGEVYSWG 294
            G    LG  +   +  PK +      ++  + K  C   H  TVT+       G VY  G
Sbjct: 1275 GEHMCLGNGSNKNELSPKMIEF---FINKKIEKVVCGLYHTATVTAAENGSDRGNVYICG 1331

Query: 295  VGEHGKLGHGNTLS----QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
             GEHGKLG G  L      +    ++  L    +   S+G   SA +T +G LYTWG G+
Sbjct: 1332 GGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGN 1391

Query: 351  HGRLGHGDLKSRHTPTLVT 369
             G++G+G  +    PT ++
Sbjct: 1392 FGQIGNGKTEDMWLPTKIS 1410



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 15/194 (7%)

Query: 358  DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKV-TT 415
            DL     P LV       +V+CG  H  V+S DG  +++ G+ + G+LGH  + GK  +T
Sbjct: 1018 DLLLNPMPPLVKNEKKAVSVACGWEHIAVISSDGE-LFTWGNNSQGQLGHGLNVGKYQST 1076

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISF------HTPVLVTGL 469
            P+ +E  +   +  +  G   SVA+     ++ WG   R   +        + P  +   
Sbjct: 1077 PRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWG-SSRYGQLGHGVLTPQNLPKKIEDF 1135

Query: 470  SSHQ-IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVD-QPSKVVGLED 524
            +  Q ++ ++ G +H + L +  +++ +G N  GQ G  NF N   P+  + S++VG+  
Sbjct: 1136 TGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHG 1195

Query: 525  VCVRQICAGSLFSI 538
              +  I AG   SI
Sbjct: 1196 ERITAIAAGHSHSI 1209


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  L+D+  V  +CG  H+L LS+ G 
Sbjct: 98  ALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSK-GS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+S G    G+LG   +    + P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  F  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRF-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  T     +P+ +     I  + ++ C   H L ++   EV+SWG  +HG+LG G 
Sbjct: 115 QLGLPGTEEYIKVPRNIKSLTDIQIVQIA-CGYYHSLALSKGSEVFSWGQNKHGQLGLGF 173

Query: 306 TL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            L SQ  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R  
Sbjct: 174 ELKSQSAPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + + G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+  KV  P+ I++L   ++ ++  G   S+AL+    VF WG      LGL    
Sbjct: 118 LPGTEEYIKV--PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFEL 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            S   P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRFVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVQDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +      P  +  L+  QIV ++ G  H LALS+ +EV++WG N  GQ G        
Sbjct: 119 PGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   Q+ AG   S   T+
Sbjct: 179 SAPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 49.3 bits (116), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 145/301 (48%), Gaps = 17/301 (5%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           V L  +   E H L + S G+V+S G    G+LG        + K I   L    V  VS
Sbjct: 23  VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIR-ALETLHVDLVS 81

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELSD--VGAVSCGESHTL 385
            G  HS AV   G ++ WG G  G+LG G+ K  +  P  +  L+D  +  VSCG  H+L
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSL 141

Query: 386 VLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            LS+ G  V+S GS + G+LG  +      +P+ + +L    + +V AG + S AL+  G
Sbjct: 142 ALSEGGQ-VFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSG 200

Query: 445 LVFWWG------LGLRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             F WG      L L  +++S   + P  ++ L +  ++ +S G  H + L+Q  +V+ +
Sbjct: 201 TSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTF 260

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G NT GQ G    +     P  V G+ D  V QI  GS  ++AY V  +   +S    P 
Sbjct: 261 GDNTYGQLGHSPTAEK-SGPQLVEGI-DGLVSQIDCGSYHTLAY-VYTTGKVVSFGREPT 317

Query: 557 C 557
           C
Sbjct: 318 C 318



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 23/261 (8%)

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           SWG G  G       +S+RR      GL G  + Q ++G  HS  +  +G +++ G+   
Sbjct: 4   SWGPGPRG------PVSRRRV-----GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGR 52

Query: 352 GRLGH--GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           G+LG       ++       E   V  VSCG+ H+L +   G  V++ G+G+ G+LG  +
Sbjct: 53  GQLGQRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGTGE 111

Query: 410 TGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
             +    P  I+ L   ++++V  G   S+AL+  G VF WG      LGL     S  +
Sbjct: 112 FKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQAS 171

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVV 520
           P  V  L    +  V+ G +H  ALS     + WG N  GQ    ++N S    +P  + 
Sbjct: 172 PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSIS 231

Query: 521 GLEDVCVRQICAGSLFSIAYT 541
            L+++ V  I  G   ++  T
Sbjct: 232 ALKNLGVIYISCGYEHTVVLT 252



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 25/331 (7%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSR--PRLQSLPS-NIRHIEAGQFCTFLLDSTGGLL 241
           +++ +V++ G N   Q L +    CS    R+++L + ++  +  G+  +  +   G + 
Sbjct: 39  LSNGQVHSCGDNGRGQ-LGQRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVF 97

Query: 242 VYGKGWLGLANTTIQPLPKRVPLEAAI---VSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G  G   T        +P++      + +    C   H L ++  G+V+SWG    
Sbjct: 98  AWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSD 157

Query: 299 GKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-H 356
           G+LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG  + G+L  H
Sbjct: 158 GQLGLGKKFPSQASPQRVR-SLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALH 216

Query: 357 GDLKS--RHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
            +  S   + P  ++ L ++G   +SCG  HT+VL+Q+G  V++ G    G+LGH  T +
Sbjct: 217 KNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNG-KVFTFGDNTYGQLGHSPTAE 275

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG--- 468
            + P+++E +    V ++  G+  ++A  +  G V  +G      S   H   L      
Sbjct: 276 KSGPQLVEGIDGL-VSQIDCGSYHTLAYVYTTGKVVSFGREPTCKSSPTHPEALTENVDF 334

Query: 469 ---LSSHQIVDVSIGDSHVLALSQYNEVYAW 496
              +S+  +VD  +   H+ A +  N V  +
Sbjct: 335 TCLISADDLVDFQV--KHIFAGTYANFVTTY 363



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 91/209 (43%), Gaps = 25/209 (11%)

Query: 345 TWGEGDHG-----RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           +WG G  G     R+G G ++ R   +             GE H+L+L  +G  V S G 
Sbjct: 4   SWGPGPRGPVSRRRVGLGGVELRQAAS-------------GERHSLLLLSNGQ-VHSCGD 49

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG          K I AL    V  V  G   S+A+   G VF WG      LG 
Sbjct: 50  NGRGQLGQRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGT 109

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
                +   P+ +  L+  +I  VS G  H LALS+  +V++WGSN+ GQ G        
Sbjct: 110 GEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQ 169

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P +V  L+ + + Q+ AG   S A ++
Sbjct: 170 ASPQRVRSLDGIPLAQVAAGGAHSFALSL 198


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + ++ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   QI AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 47.8 bits (112), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + ++ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   QI AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 47.8 bits (112), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 18/333 (5%)

Query: 189 KVYTWGCNLHHQI-LDEVRGK--CSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++Y WG   H Q+ L  +  +   +  ++   P + ++ +  G   T  L +TG +   G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 245 KG-WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              +  L +      P  +P     V + +  C   H L ++  G+V SWG  + G+LGH
Sbjct: 66  SNDYSQLGHDLPTKRPLLIPELQDYVIIQIC-CGSRHSLALSDWGQVLSWGDNDCGQLGH 124

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HGDLK 360
                  +   ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG     DL 
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184

Query: 361 SRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             + P  +T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D    + P  
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDETNRSYPTQ 243

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQ 473
           ++ LR   VR V  G  FSV LT +G VF  G G         S +   P +V  L    
Sbjct: 244 LKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST 303

Query: 474 IVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           I  V+ G+ H LAL      VYA+G  + GQ G
Sbjct: 304 ITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P  I        V QV+ GH H+  +T  G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  D+ +LGH DL ++  P L+ EL D  +  + CG  H+L LS  G  V S G 
Sbjct: 60  KVYACGSNDYSQLGH-DLPTKR-PLLIPELQDYVIIQICCGSRHSLALSDWGQ-VLSWGD 116

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LGH  D   V  PKV+  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + S +   H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G ++ +
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N    P+++  L  + VR +  G  FS+  T
Sbjct: 237 NR-SYPTQLKTLRTLGVRFVACGDEFSVFLT 266



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 23/247 (9%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +V +WG N   Q+     G  +   +  LP  +R         I  G   +  L S G L
Sbjct: 110 QVLSWGDNDCGQL-----GHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGEL 164

Query: 241 LVYGK---GWLGLA---NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
             +G    G LG+    + T    P R+     I  L+   C   H   ++  G V+ WG
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWG 223

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
               G+LG  +  ++  P   +  L    V  V+ G   S  +T +G ++T G G +G+L
Sbjct: 224 RNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG   +   P +V EL  S +  V+CG  HTL L      V++ G G+ G+LG   T  
Sbjct: 283 GHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKS 342

Query: 413 VTTPKVI 419
           +  P+V+
Sbjct: 343 LMLPQVV 349



 Score = 49.3 bits (116), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           V+ WG N   Q+ L++   +    +L++L +  +R +  G   +  L + GG+   G G 
Sbjct: 219 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
              LG   ++ + LP+ V +E    +++   C   H L  V S G VY++G+G  G+LG 
Sbjct: 279 YGQLGHGFSSNEMLPRMV-MELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337

Query: 304 GNTLSQRRPKLIMG 317
            +T S   P++++G
Sbjct: 338 RSTKSLMLPQVVIG 351


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K T+P+++++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V +I  G   +  + VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSTF-VPSSGRIYS 318



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 9/270 (3%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
              ++    ++  L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233

Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
            L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                   C     S  +   G ++ +GLG
Sbjct: 293 GSIVTEIACGRQHTSTFVPSSGRIYSFGLG 322



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     KRV  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            +G E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL +  
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
           +  WG    G+LG G       L+ R +   + + + DVG   CG  HT+ +  DG TV+
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVY 56

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
           + G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL    
Sbjct: 57  TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G    
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                 P  +  L  +   Q+ AG   S   T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H  T V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  Y
Sbjct: 331 STSNRKSPFTVKGNWY 346


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + ++ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 95.1 bits (235), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   V +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   QI AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 47.8 bits (112), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 18/333 (5%)

Query: 189 KVYTWGCNLHHQI-LDEVRGK--CSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++Y WG   H Q+ L  +  +   +  ++   P + ++ +  G   T  L +TG +   G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 245 KG-WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
              +  L +      P  +P     V + +  C   H L ++  G+V SWG  + G+LGH
Sbjct: 66  SNDYSQLGHDLPTKRPLLIPELQDYVIIQIC-CGSRHSLALSDWGQVLSWGDNDCGQLGH 124

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG---HGDLK 360
                  +   ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG     DL 
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184

Query: 361 SRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
             + P  +T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D    + P  
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDETNRSYPTQ 243

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLSSHQ 473
           ++ LR   VR V  G  FSV LT +G VF  G G         S +   P +V  L    
Sbjct: 244 LKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST 303

Query: 474 IVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           I  V+ G+ H LAL      VYA+G  + GQ G
Sbjct: 304 ITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P  I        V QV+ GH H+  +T  G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  D+ +LGH DL ++  P L+ EL D  +  + CG  H+L LS  G  V S G 
Sbjct: 60  KVYACGSNDYSQLGH-DLPTKR-PLLIPELQDYVIIQICCGSRHSLALSDWGQ-VLSWGD 116

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LGH  D   V  PKV+  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + S +   H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G ++ +
Sbjct: 177 VNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDET 236

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           N    P+++  L  + VR +  G  FS+  T
Sbjct: 237 NR-SYPTQLKTLRTLGVRFVACGDEFSVFLT 266



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 23/247 (9%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +V +WG N   Q+     G  +   +  LP  +R         I  G   +  L S G L
Sbjct: 110 QVLSWGDNDCGQL-----GHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGEL 164

Query: 241 LVYGK---GWLGLA---NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
             +G    G LG+    + T    P R+     I  L+   C   H   ++  G V+ WG
Sbjct: 165 YSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWG 223

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
               G+LG  +  ++  P   +  L    V  V+ G   S  +T +G ++T G G +G+L
Sbjct: 224 RNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG   +   P +V EL  S +  V+CG  HTL L      V++ G G+ G+LG   T  
Sbjct: 283 GHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKS 342

Query: 413 VTTPKVI 419
           +  P+V+
Sbjct: 343 LMLPQVV 349



 Score = 49.3 bits (116), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           V+ WG N   Q+ L++   +    +L++L +  +R +  G   +  L + GG+   G G 
Sbjct: 219 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
              LG   ++ + LP+ V +E    +++   C   H L  V S G VY++G+G  G+LG 
Sbjct: 279 YGQLGHGFSSNEMLPRMV-MELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337

Query: 304 GNTLSQRRPKLIMG 317
            +T S   P++++G
Sbjct: 338 RSTKSLMLPQVVIG 351


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 28/260 (10%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP-------KLIMG-GLYGKRVTQV 327
            C   H   +T +  +Y++G GE G+LGHG       P        LI   G+    V  V
Sbjct: 1251 CGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGVVDV 1310

Query: 328  SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
            S G  H+  VT +G LY +G G+ GRLG G+  S   P+ V +L ++ AV+CG  HTL L
Sbjct: 1311 SCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRV-DLRNIAAVACGREHTLAL 1369

Query: 388  SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
            +  G  V++ G+G  G+LG+        P ++E L ++ +  + AG   S AL+ DG V 
Sbjct: 1370 TSKGR-VFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGEVL 1428

Query: 448  WWGLGLRSSSISFHT------PVLVTGLSSHQIVD-----------VSIGDSHVLALSQY 490
             WG G  S ++   T      P LV G  ++  V+           V+ G  H LA +  
Sbjct: 1429 TWGFG-SSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATND 1487

Query: 491  NEVYAWGSNTMGQCGQDNFS 510
              +Y WG    GQ G ++ S
Sbjct: 1488 GVLYGWGDAAAGQLGAEHLS 1507



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 28/236 (11%)

Query: 237  TGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
            TG   +YG GW     LG   T     P RV L     +++   C   H L +TS+G V+
Sbjct: 1321 TGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLR----NIAAVACGREHTLALTSKGRVF 1376

Query: 292  SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            ++G G  G+LG+G+   +  P L+ G L    +  ++AG  HS A++ DG + TWG G  
Sbjct: 1377 AFGAGFGGRLGNGSETDEELPFLVEG-LEEYSIVAIAAGECHSCALSRDGEVLTWGFGSS 1435

Query: 352  GRLGHGDLKSRHTPTLVT-------------ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            G LGHG   +   PTLV              ++S V +V+CG  HTL  + DG  ++  G
Sbjct: 1436 GALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAATNDG-VLYGWG 1494

Query: 399  SGNLGKLGHEDTGK----VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
                G+LG E        V +PK I       +R +  GT  S   +  G +F WG
Sbjct: 1495 DAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGTFTSAVCSTQGQLFMWG 1550



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 117/246 (47%), Gaps = 30/246 (12%)

Query: 322  KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV-----------TE 370
            +RV Q++ G+ H+A +T+D  LYT+G G+ GRLGHG  +    P  V            E
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVE 1303

Query: 371  LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
               V  VSCG  HT+V++ +G  ++  G G  G+LG  +TG    P  ++ LR   +  V
Sbjct: 1304 FGGVVDVSCGREHTMVVTGNGD-LYGFGWGEAGRLGTGETGSSLYPSRVD-LRN--IAAV 1359

Query: 431  CAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
              G   ++ALT  G VF +G G        S      P LV GL  + IV ++ G+ H  
Sbjct: 1360 ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSC 1419

Query: 486  ALSQYNEVYAWG---SNTMGQCGQDN------FSNPVDQPSKVVGLEDV-CVRQICAGSL 535
            ALS+  EV  WG   S  +G   +DN         P   P+    + D+  V  +  GS 
Sbjct: 1420 ALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSY 1479

Query: 536  FSIAYT 541
             ++A T
Sbjct: 1480 HTLAAT 1485



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 13/198 (6%)

Query: 353  RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH---ED 409
            RL   +L +    +    L  V  ++CG  HT +++ D H +++ G G  G+LGH   ED
Sbjct: 1225 RLSTENLSAVRMVSFPPPLRRVVQIACGYRHTALITDDRH-LYTFGHGECGRLGHGTEED 1283

Query: 410  ------TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV--FWWGLGLRSSSISFH 461
                   G  T+    E +    V  V  G   ++ +T +G +  F WG   R  +    
Sbjct: 1284 CTDPIPVGYFTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETG 1343

Query: 462  TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            + +  + +    I  V+ G  H LAL+    V+A+G+   G+ G  + ++  + P  V G
Sbjct: 1344 SSLYPSRVDLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDE-ELPFLVEG 1402

Query: 522  LEDVCVRQICAGSLFSIA 539
            LE+  +  I AG   S A
Sbjct: 1403 LEEYSIVAIAAGECHSCA 1420


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 156/334 (46%), Gaps = 21/334 (6%)

Query: 246 GWLGLANTTIQPLP-KRVP--LEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           GWLG+A       P +R P  LEA   + L  +   E H L + S   VYS G    G+L
Sbjct: 1   GWLGIAGMYFTWAPGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQL 60

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +  S +RP+ I   L    +  VS G  HS AV   G ++TWG G  G+LG G+ K 
Sbjct: 61  GQKSPQSTKRPEPIQ-ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKE 119

Query: 362 -RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPK 417
               PT +  L+ +    VSCG  H+L LS+DG  V+S GS   G+LG   +     +P+
Sbjct: 120 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQ-VFSWGSNRQGQLGLGNNLCSQASPQ 178

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGL 469
            +++L    + +V AG + S AL+  G  F WG        L   S+    + P  +  L
Sbjct: 179 KVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGAL 238

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            +  +V +S G  H   L++  +V+ +G ++  Q  Q +  +    P  + G+    V Q
Sbjct: 239 KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-QHSPRSGRGGPQLIEGIGGH-VSQ 296

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
           I  GS  +IAY V  +   +S    P C     H
Sbjct: 297 IECGSYHTIAY-VYTTGQVVSLGRGPSCTSNATH 329



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 21/313 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           ++ +VY+ G N   Q+  +      RP  +Q+L + +I  +  G+  +  +   G +  +
Sbjct: 45  SNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTW 104

Query: 244 G---KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LG+  +  I  +P ++   A I  + VS C   H L ++ +G+V+SWG    G
Sbjct: 105 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVS-CGHYHSLALSEDGQVFSWGSNRQG 163

Query: 300 KLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---G 355
           +LG GN L SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L   G
Sbjct: 164 QLGLGNNLCSQASPQKVK-SLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSG 222

Query: 356 HGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           +   +  + P  +  L   +V  +SCG  HT VL++DG  V++ G  +  +L H      
Sbjct: 223 NSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQ-VFTFGGSSSEQLQHSPRSGR 281

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG---- 468
             P++IE +    V ++  G+  ++A  +  G V   G G   +S + H     +     
Sbjct: 282 GGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCL 340

Query: 469 LSSHQIVDVSIGD 481
           LS+  +VD+ + D
Sbjct: 341 LSAKDLVDIEVKD 353


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 134/276 (48%), Gaps = 29/276 (10%)

Query: 245 KGWLGLANTTIQPLPKRV---PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +G+L   +  I   P+ V   P     VS+      E H L +  +G+V+S G  E+G+L
Sbjct: 41  RGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLADDGKVWSCGSNENGEL 100

Query: 302 GHGNTLSQR---RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HG 357
           G G          P L+ GG+    + Q++AG +H+ AV +DG L+ WG   HG+L    
Sbjct: 101 GRGGCQEGSFTIYPVLLSGGV---NIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPS 157

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVT-T 415
           ++ S   P  V  L++   V+CG  HT+ + + G   VW          G +  G+V   
Sbjct: 158 NITSTDIPKRVVSLTETVQVACGTDHTIAIVESGRIFVW----------GLQPDGRVLYA 207

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           PK IE      V +V AG+ + VALT  G +F WG      LG  S +    TP  VT L
Sbjct: 208 PKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLG-TSDNKERTTPAEVTTL 266

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            S  +V V+ G SH +AL+    ++  GS++ GQ G
Sbjct: 267 HSLNVVHVACGHSHTVALTHEGRLFVCGSDSCGQLG 302



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 147/349 (42%), Gaps = 75/349 (21%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSR------PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           KV++ G N + ++    RG C        P L S   NI  I AG+     +   G L  
Sbjct: 88  KVWSCGSNENGEL---GRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFA 144

Query: 243 YGK---GWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           +G    G L L +N T   +PKRV      V ++   C   H + +   G ++ WG+   
Sbjct: 145 WGSNSHGQLALPSNITSTDIPKRVVSLTETVQVA---CGTDHTIAIVESGRIFVWGLQPD 201

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G++ +        PK I        V QV+AG  +  A+T  G ++ WG  ++G+LG  D
Sbjct: 202 GRVLYA-------PKEIEF-FMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSD 253

Query: 359 LKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            K R TP  VT L   +V  V+CG SHT+ L+ +G  ++  GS + G+LG          
Sbjct: 254 NKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGR-LFVCGSDSCGQLGSG-------- 304

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVD 476
                      RKV                            S +T + VT +    +  
Sbjct: 305 -----------RKVP---------------------------SQNTMLAVTEMLGTHVTR 326

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
           V+ G  H LAL+   ++YA+G N+ GQ G  N  + V  P  +  L DV
Sbjct: 327 VACGRCHTLALAG-GKMYAFGLNSSGQLGSGNVRSQV-TPRPIDALTDV 373



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQ------RRPKLIMGGLY---GKRVTQVSAGHSHSAAVTE 339
           ++Y++G G  G+LG+   L+       + P++++G      G  V  ++ G  H+  + +
Sbjct: 26  QLYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLAD 85

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRH---TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           DG +++ G  ++G LG G  +       P L++   ++  ++ G +H + ++ DG  +++
Sbjct: 86  DGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGR-LFA 144

Query: 397 MGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            GS + G+L    +      PK + +L +    +V  GT  ++A+   G +F W  GL+ 
Sbjct: 145 WGSNSHGQLALPSNITSTDIPKRVVSLTE--TVQVACGTDHTIAIVESGRIFVW--GLQP 200

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
                + P  +    +  +V V+ G  + +AL+    ++ WGSN  GQ G  + +     
Sbjct: 201 DGRVLYAPKEIEFFMALPVVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSD-NKERTT 259

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYT 541
           P++V  L  + V  +  G   ++A T
Sbjct: 260 PAEVTTLHSLNVVHVACGHSHTVALT 285



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 37/279 (13%)

Query: 164 TDIDSTSTPKLTYNIGDT---------DISVAHS-KVYTWGCNLHHQIL---DEVRGKCS 210
           ++I ST  PK   ++ +T          I++  S +++ WG     ++L    E+    +
Sbjct: 157 SNITSTDIPKRVVSLTETVQVACGTDHTIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMA 216

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
            P +Q        + AG      L  +G + V+G    G LG ++   +  P  V    +
Sbjct: 217 LPVVQ--------VNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHS 268

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           +  + V+ C  +H + +T EG ++  G    G+LG G  +  +   L +  + G  VT+V
Sbjct: 269 LNVVHVA-CGHSHTVALTHEGRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLGTHVTRV 327

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           + G  H+ A+   G +Y +G    G+LG G+++S+ TP  +  L+DV +V  G   +  +
Sbjct: 328 ACGRCHTLALA-GGKMYAFGLNSSGQLGSGNVRSQVTPRPIDALTDVVSVFAGWDQSFCI 386

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
                      S N  +L    +  + TPK + +LR+ +
Sbjct: 387 Q----------SKNEEELSSATSYALQTPKFL-SLRRLQ 414


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 167/374 (44%), Gaps = 31/374 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSK 275
           ++  I  G     L    G +  +G+   G LG    T    PK V  L   IV      
Sbjct: 257 DVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFI--S 314

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   +++ G++++WG G +  G LG+    S   PK + G L G +V  V+ G  H
Sbjct: 315 CGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWH 374

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVL---- 387
           SA +T  G LYT+G+G  G LGHG+ +S   P  V  L+      V+CG  H+  +    
Sbjct: 375 SALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAIVEAS 434

Query: 388 SQDGHTV-----WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
            Q G  V     ++ G G+  +LG  D      P  ++AL +    ++  G + +VAL  
Sbjct: 435 VQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALAT 494

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            G V+  G      LG    S   H  ++   L++  + ++S G +HV  L+  +EVY W
Sbjct: 495 SGHVYTMGSSDNGQLG-NPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSRSEVYTW 553

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    G+ G  +  N    P+ V  L+D  V+ I  GS F+    +   +  +S A   +
Sbjct: 554 GLGANGRLGHGDL-NDKKTPTIVEALKDRHVKSISCGSNFTTCICI---HRWVSGADQSV 609

Query: 557 CVDVRPHTFTLIRE 570
           C   R   F   R+
Sbjct: 610 CTGCR-QAFGFTRK 622



 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 147/331 (44%), Gaps = 77/331 (23%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSNI-RHIEAGQFCTFLLDSTGGL 240
           ++    +V+TWG  L  ++        SRP+L +SL   I   I  G+F T  + ++G L
Sbjct: 270 LTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFISCGEFHTCAISASGDL 329

Query: 241 LVYGKG-----WLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
             +G G      LG        LPKRV  PLE   V LSV+ C   H   +TS G +Y++
Sbjct: 330 FNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQV-LSVA-CGSWHSALITSTGRLYTF 387

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL----------L 343
           G G+ G LGHGN  S   PK +   L G R  +V+ G  HSAA+ E  +          L
Sbjct: 388 GDGKFGALGHGNRESAAYPKEVEA-LNGFRTVKVACGVWHSAAIVEASVQTGMNVVSKKL 446

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGS-- 399
           YTWG+GD  RLG GD ++R  PT +  L   +   + CG++ T+ L+  GH V++MGS  
Sbjct: 447 YTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALATSGH-VYTMGSSD 505

Query: 400 --------------------------------------------------GNLGKLGHED 409
                                                             G  G+LGH D
Sbjct: 506 NGQLGNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSRSEVYTWGLGANGRLGHGD 565

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                TP ++EAL+   V+ +  G++F+  +
Sbjct: 566 LNDKKTPTIVEALKDRHVKSISCGSNFTTCI 596


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  120 bits (302), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 64/175 (36%), Positives = 102/175 (58%), Gaps = 5/175 (2%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLS-QRRPKLIMG-GLYGKRVTQVSAGHSHSAAV 337
           + +++ ++G V+SWG GE G+LG+   +  Q+ PK+I    +    VT+++ G  HSAA 
Sbjct: 69  YSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAAC 128

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVW 395
           T  G LYTWG+G +G+LGHG  ++   P  V E  D+    ++CG+SHT+ +   G+ V+
Sbjct: 129 TNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIIS-GNLVY 187

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
             G    G+LG +D  +V  PK I    +  V ++  G   S+ALT +G V+ WG
Sbjct: 188 GWGFNQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWG 242



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 22/248 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGK---CSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGL 240
           +K++ WGC+   Q+  E   K    S P +Q  P      +  I A    +  +D+ G +
Sbjct: 21  NKLFVWGCSDDWQLGIETGPKNYQISDP-VQITPDYWQGKLEKIYAQSNYSMSIDTKGNV 79

Query: 241 LVYGKGWLGL----ANTTIQPLPKRVPLEAAIVSLSVSKCS--EAHVLTVTSEGEVYSWG 294
             +G G  G      +   Q  PK +    +I ++ V+K +    H    T++G++Y+WG
Sbjct: 80  FSWGSGEFGRLGYEKDVKYQKYPKIIE-TFSIQNIIVTKIALGTHHSAACTNQGKLYTWG 138

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G +G+LGHG+  ++  PK +       RV +++ G SH+ A+    L+Y WG    G+L
Sbjct: 139 QGVNGQLGHGSNQNEEIPKKVK-EFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQL 197

Query: 355 GHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HED 409
           G  DL   + P  +   +  +V  + CG+ H++ L+ +G  V+S GS   G+LG    + 
Sbjct: 198 GFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQ-VYSWGSNEYGQLGIQLGKQ 256

Query: 410 TGKVTTPK 417
           +GK+T P+
Sbjct: 257 SGKMTCPE 264



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 16/231 (6%)

Query: 289 EVYSWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           +++ WG  +  +LG            P  I    +  ++ ++ A  ++S ++   G +++
Sbjct: 22  KLFVWGCSDDWQLGIETGPKNYQISDPVQITPDYWQGKLEKIYAQSNYSMSIDTKGNVFS 81

Query: 346 WGEGDHGRLGH-GDLKSRHTPTLVTELSD----VGAVSCGESHTLVLSQDGHTVWSMGSG 400
           WG G+ GRLG+  D+K +  P ++   S     V  ++ G  H+   +  G  +++ G G
Sbjct: 82  WGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQG-KLYTWGQG 140

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
             G+LGH        PK ++  +  RV ++  G S ++A+    LV+ WG      LG +
Sbjct: 141 VNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQ 200

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             S   + P  +   +  ++V +  G  H +AL+   +VY+WGSN  GQ G
Sbjct: 201 DLS-RVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 9/157 (5%)

Query: 394 VWSMGSGNLGKLGHE-DTGKVTTPKVIE--ALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           V+S GSG  G+LG+E D      PK+IE  +++   V K+  GT  S A T  G ++ WG
Sbjct: 79  VFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWG 138

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G+       S+ +   P  V      ++++++ GDSH +A+   N VY WG N  GQ G
Sbjct: 139 QGVNGQLGHGSNQNEEIPKKVKEFQDIRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLG 198

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             + S  V+ P K++      V QI  G   SIA TV
Sbjct: 199 FQDLSR-VNLPKKIMFFNQKEVVQIQCGKKHSIALTV 234


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 168/342 (49%), Gaps = 26/342 (7%)

Query: 193 WGCNLHHQILDEVRGKCSRP---RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           WG N + Q+ D        P   ++Q L +    + A  + T  L   G +  +G    G
Sbjct: 465 WGHNGYGQLGDGTSVDRFLPGPVQVQGL-TGATALSATAYHTLALAQDGTVWGWGYNDSG 523

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG     ++  P  +P    + +L+       H L +  +G V++WG+   G+LG G T
Sbjct: 524 QLGDTVDMVRVTPAPLPGLTGVTALA---SGTYHSLALKQDGTVWAWGLNNLGQLGDGTT 580

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           +S R  ++ + GL    VT ++A   HS A+ +DG ++TWG    G+LG G   SR TP 
Sbjct: 581 VS-RTEQMPVPGL--TDVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPA 637

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L+ V A++ G  H+L L QDG TVW+ G    G+LG+     V +P  ++      
Sbjct: 638 QVPGLTGVSAIAAGLVHSLALKQDG-TVWAWGRNTDGQLGNG--AAVNSPVPVQVQGLTG 694

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           V  + AG+  S+AL  DG  + WG      LG  + + S  TPV V GL++  +  ++ G
Sbjct: 695 VSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSL-TPVQVQGLTA--VTALAGG 751

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           D+H +AL +   V+ WG N  G+ G D  +     P +V GL
Sbjct: 752 DAHSMALLRDGTVWTWGYNAEGELG-DGTTLDRTAPVRVQGL 792



 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/297 (36%), Positives = 145/297 (48%), Gaps = 29/297 (9%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
             T   P P+RV   AA           AH L V  +G   +WG   +G+LG G ++ + 
Sbjct: 432 GGTPCAPSPRRVTWIAA---------GGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRF 482

Query: 311 RPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
            P  + + GL G   T +SA   H+ A+ +DG ++ WG  D G+LG      R TP  + 
Sbjct: 483 LPGPVQVQGLTG--ATALSATAYHTLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAPLP 540

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
            L+ V A++ G  H+L L QDG TVW+ G  NLG+LG   T   T    +  L    V  
Sbjct: 541 GLTGVTALASGTYHSLALKQDG-TVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTD--VTA 597

Query: 430 VCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
           + A T  S+AL  DG V+ WG      LG   ++ S  TP  V GL+   +  ++ G  H
Sbjct: 598 LAASTYHSLALKQDGTVWTWGYNSSGQLG-DGTTASRLTPAQVPGLTG--VSAIAAGLVH 654

Query: 484 VLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            LAL Q   V+AWG NT GQ G     N PV  P +V GL  V    I AGS  S+A
Sbjct: 655 SLALKQDGTVWAWGRNTDGQLGNGAAVNSPV--PVQVQGLTGVSA--IAAGSYHSLA 707



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 13/187 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+TWG N   Q+ D      SR     +P  + +  I AG   +  L   G +  +G+  
Sbjct: 614 VWTWGYNSSGQLGDGT--TASRLTPAQVPGLTGVSAIAAGLVHSLALKQDGTVWAWGRNT 671

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG       P+P +V     +  +S       H L +  +G  +SWG    G+LG+ 
Sbjct: 672 DGQLGNGAAVNSPVPVQV---QGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNE 728

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
                  P  + G      VT ++ G +HS A+  DG ++TWG    G LG G    R  
Sbjct: 729 TITGSLTPVQVQG---LTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTA 785

Query: 365 PTLVTEL 371
           P  V  L
Sbjct: 786 PVRVQGL 792


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + ++ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 346 WGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           WG    G+LG G       L+ R +   V +   V  V CG  HT+ +  DG TV++ G 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNK--KVRDVGCGLRHTVFVLDDG-TVYTCGC 60

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL------GL 453
            +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL      GL
Sbjct: 61  NDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G        
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQ 178

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
             P  +  L  +   QI AG   S   T+
Sbjct: 179 ASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 47.8 bits (112), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
 gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
          Length = 386

 Score =  120 bits (302), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 36/315 (11%)

Query: 219 SNIRHIEAG------QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIV 269
           +++RH+ AG       F   LL+  G +  +G    G LG  +T  +  P      AA+ 
Sbjct: 64  ADVRHLAAGGDSDTRSFAVALLND-GTVQSWGGNAAGQLGDGSTVGRSFP------AAVT 116

Query: 270 SLS-VSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            LS VSK +   +       G V +WG   +G+LG+G   +  RP  +       +V  +
Sbjct: 117 GLSGVSKTAAGVNSAYAVRGGRVLAWGDNTYGQLGNGTAGASPRPVAVQSL---NKVEDI 173

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           +AG  H+ A+ EDG ++TWG   +G+LG G    R+TP  V +L+DV  VS G  H+L  
Sbjct: 174 AAGCFHAIALREDGTVWTWGRNHYGQLGLGTTTDRNTPQRVPDLTDVVEVSAGCHHSLAR 233

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           + DG TV + G    G+LG+  T   + P  +  L    V ++ A    S A+  DG + 
Sbjct: 234 TADG-TVKAWGYNASGQLGNGSTAHASAPVDVAHLAD--VSRIFAAGYHSFAVLDDGQLR 290

Query: 448 WWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            WG      LG   S++S  TPV V GL+   +  ++ G +H +A+     V AWG NT+
Sbjct: 291 AWGWNSAGHLG-DGSTVSRTTPVPVPGLTD--VTALAGGYNHTVAVLADGSVLAWGENTL 347

Query: 502 GQCGQ---DNFSNPV 513
           GQ G     N S PV
Sbjct: 348 GQLGDGTTTNSSTPV 362



 Score =  115 bits (288), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 83/237 (35%), Positives = 121/237 (51%), Gaps = 12/237 (5%)

Query: 184 SVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           +V   +V  WG N + Q+ +   G   RP  +QSL + +  I AG F    L   G +  
Sbjct: 133 AVRGGRVLAWGDNTYGQLGNGTAGASPRPVAVQSL-NKVEDIAAGCFHAIALREDGTVWT 191

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G+   G LGL  TT +  P+RVP    +V +S + C   H L  T++G V +WG    G
Sbjct: 192 WGRNHYGQLGLGTTTDRNTPQRVPDLTDVVEVS-AGCH--HSLARTADGTVKAWGYNASG 248

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG+G+T     P  +    +   V+++ A   HS AV +DG L  WG    G LG G  
Sbjct: 249 QLGNGSTAHASAPVDVA---HLADVSRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGST 305

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            SR TP  V  L+DV A++ G +HT+ +  DG +V + G   LG+LG   T   +TP
Sbjct: 306 VSRTTPVPVPGLTDVTALAGGYNHTVAVLADG-SVLAWGENTLGQLGDGTTTNSSTP 361



 Score =  101 bits (251), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 20/247 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG-----HSHSAAVTEDGLLY 344
           V +WG    G+LG+G TL+Q+ P  +  GL    V  ++AG      S + A+  DG + 
Sbjct: 33  VRAWGGNGAGQLGNGTTLAQQTPAGVR-GLNRADVRHLAAGGDSDTRSFAVALLNDGTVQ 91

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           +WG    G+LG G    R  P  VT LS V   + G +    +   G  V + G    G+
Sbjct: 92  SWGGNAAGQLGDGSTVGRSFPAAVTGLSGVSKTAAGVNSAYAVR--GGRVLAWGDNTYGQ 149

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           LG+   G    P  +++L K  V  + AG   ++AL  DG V+ WG      LGL +++ 
Sbjct: 150 LGNGTAGASPRPVAVQSLNK--VEDIAAGCFHAIALREDGTVWTWGRNHYGQLGLGTTT- 206

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
             +TP  V  L+   +V+VS G  H LA +    V AWG N  GQ G  + ++    P  
Sbjct: 207 DRNTPQRVPDLTD--VVEVSAGCHHSLARTADGTVKAWGYNASGQLGNGSTAH-ASAPVD 263

Query: 519 VVGLEDV 525
           V  L DV
Sbjct: 264 VAHLADV 270



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 17/212 (8%)

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCG-----ESHTLVLSQDGH 392
           D  +  WG    G+LG+G   ++ TP  V  L  +DV  ++ G      S  + L  DG 
Sbjct: 30  DPWVRAWGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDG- 88

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TV S G    G+LG   T   + P  +  L    V K  AG + + A+   G V  WG  
Sbjct: 89  TVQSWGGNAAGQLGDGSTVGRSFPAAVTGLSG--VSKTAAGVNSAYAVR-GGRVLAWGDN 145

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
             G   +  +  +P  V   S +++ D++ G  H +AL +   V+ WG N  GQ G    
Sbjct: 146 TYGQLGNGTAGASPRPVAVQSLNKVEDIAAGCFHAIALREDGTVWTWGRNHYGQLGLGTT 205

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++  + P +V  L DV   ++ AG   S+A T
Sbjct: 206 TDR-NTPQRVPDLTDVV--EVSAGCHHSLART 234


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLHDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 169/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DYKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYF 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +       YN          GQC           P+ +   E  CV++I +G   S A+ 
Sbjct: 344 NWF----PYN----------GQC-----------PTDIDSEEYFCVKRIFSGGDQSFAHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 SNPQNCRPPDDFR--CTDPSKQIWTVNEALIQKW 410



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V  DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLHDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDY 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYFPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258


>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
 gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
          Length = 387

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 134/249 (53%), Gaps = 11/249 (4%)

Query: 246 GWLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTS-EGEVYSWGVGEHGKLGH 303
           G LG      + LP+ +   + ++  +S   C  AHV+ + S +G+V +WG G  G+LGH
Sbjct: 31  GQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGGAHVIALNSGDGKVLTWGRGTSGQLGH 90

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           GN LS   P+ +   L    +T +SAG SHS  V++ G ++T G+G  G+LGHGD  S  
Sbjct: 91  GNMLSSVHPQPVTF-LDSFVITHISAGWSHSGFVSDKGCVFTCGDGSFGQLGHGDNNSHA 149

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKVI 419
           TP  V+  ++  V  ++CG  H+LVL + G+ V+  GSG  G+LG   +    ++ P V 
Sbjct: 150 TPVQVSYFANRHVHQIACGMRHSLVLLK-GNQVYGFGSGKRGQLGISKDKIKSISLPLVT 208

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
                 ++  +      S AL+ DG ++ WG G   +S  F    LV+ L   Q + V++
Sbjct: 209 CGFEDIKINSIITNGDHSAALSVDGHLYTWGRGFPGTSDVFTPRHLVSSL---QFIKVAL 265

Query: 480 GDSHVLALS 488
           G +H LAL+
Sbjct: 266 GWNHALALT 274



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 22/264 (8%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVT----ELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           +++WG G  G+LG G L+  H P L+      +  + +++CG +H + L+     V + G
Sbjct: 22  VWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGGAHVIALNSGDGKVLTWG 81

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL----- 453
            G  G+LGH +      P+ +  L  F +  + AG S S  ++  G VF  G G      
Sbjct: 82  RGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVSDKGCVFTCGDGSFGQLG 141

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSN 511
              + S  TPV V+  ++  +  ++ G  H L L + N+VY +GS   GQ G  +D   +
Sbjct: 142 HGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLKGNQVYGFGSGKRGQLGISKDKIKS 201

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIA-------YTVPPSNSALSSAFTPLCVDVRPHT 564
            +  P    G ED+ +  I      S A       YT        S  FTP  +     +
Sbjct: 202 -ISLPLVTCGFEDIKINSIITNGDHSAALSVDGHLYTWGRGFPGTSDVFTPRHL---VSS 257

Query: 565 FTLIREFLEQYSACFETGDYIPFC 588
              I+  L    A   TG++  FC
Sbjct: 258 LQFIKVALGWNHALALTGNFFFFC 281



 Score = 43.9 bits (102), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 319 LYGKRVTQVSAGHSHSAAVTE--DGLLYTWGEGDHGRLGHGDLKSRHTPTLVT-----EL 371
           L G +V  ++AG  HSA +T   DG + TWG G+HG+LG G  K +  P  V+     E 
Sbjct: 303 LDGMKVVDIAAGSEHSALLTGKMDGTIKTWGWGEHGQLGLGSTKDQTNPQSVSLDHEAEN 362

Query: 372 SDVG-AVSCGESHTLVL 387
            ++   V CG   T V+
Sbjct: 363 QEINLKVYCGSGFTFVV 379


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 148/283 (52%), Gaps = 23/283 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           C   H + +  +GEVY+ G+   G+LGH   GN   Q      +G L  + +  V+ G S
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIVHVACGES 94

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
           H+ A+++ G L++WG G  G+LG    + +   P ++ +L+   +  VSCG  H+L L+ 
Sbjct: 95  HNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAA 154

Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           DG   ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF 
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
           Q G D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 122/255 (47%), Gaps = 11/255 (4%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E+H L ++  G+++SWG G  G+LG   T        ++  L  + + QVS G+ HS 
Sbjct: 91  CGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSL 150

Query: 336 AVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G 
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG- 209

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G G
Sbjct: 210 AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 453 ----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQ 506
               L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G 
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 507 DNFSNPVDQPSKVVG 521
            +  N V  PS V G
Sbjct: 330 GHTCN-VKCPSPVKG 343



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 107/225 (47%), Gaps = 17/225 (7%)

Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+ G    L      P+ + G +  + V +V+ G +HS  + EDG +YT G   
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
            G+LGH   +  + P  +  L+D  +  V+CGESH L LS  G    W  GS G LG + 
Sbjct: 63  KGQLGHE--REGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMT 120

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED   V  P+VI+ L +  + +V  G   S+AL  DG  F WG      LGL     S 
Sbjct: 121 TEDA--VAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +P  V  L    +  V+ G +H  ALS    V+ WG N  GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S ++AL+  G +F WG      LGL ++  +   P ++  L+   I+ 
Sbjct: 82  ADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 185 VAHSKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLL 241
            A  + +TWG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G + 
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 242 VYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G    G LGL++   +  P  V L      + +S C E H   +T  G V+++G G  
Sbjct: 213 GWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSC 271

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHG 357
           G+LGH +   +  P+ ++  L G  VTQ++ G  H+ A V   GL+Y +G G  G+LG G
Sbjct: 272 GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 330

Query: 358 DLKSRHTPTLV 368
              +   P+ V
Sbjct: 331 HTCNVKCPSPV 341



 Score = 46.6 bits (109), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 8/146 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L +   + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
           G+T + + P  +  G +     Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLHDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 169/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DYKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYF 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +       YN          GQC           P+ +   E  CV++I +G   S A+ 
Sbjct: 344 NWF----PYN----------GQC-----------PTDIDSEEYFCVKRIFSGGDQSFAHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 SNPQNCRPPDDFR--CTDPSKQIWTVNEALIQKW 410



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V  DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLHDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDY 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYFPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 18/297 (6%)

Query: 254 TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
           ++   P   P    +VS   S     H + + +   + SWG GE G+LGHG+   +  P 
Sbjct: 3   SVMAAPDSPPQTVVLVSAGAS-----HSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPT 57

Query: 314 LIMGGLYGKRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
            ++ G     +T V  G  H+ A +ED L +Y+WG GD GRLGHG+     TP  V  L 
Sbjct: 58  -VLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQ 116

Query: 373 D--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
              +  ++CG+SH L ++  G  V S G    G+LG   T     P+ I+A     V+ +
Sbjct: 117 GLKIKQIACGDSHCLAVTMAGE-VQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMI 175

Query: 431 CAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHV 484
            AG   + A+T DG ++ WG G R  ++          P  V+ +   ++V V+ G  H 
Sbjct: 176 AAGAEHTAAVTEDGDLYGWGWG-RYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHT 234

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + +S    +Y +G +  GQ G  +F + +  P KV  L+D  + QI  G   ++A T
Sbjct: 235 ITVSDSGNLYTYGWSKYGQLGHGDFEDHL-VPHKVEALKDSTISQISGGWRHTMALT 290



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 115/220 (52%), Gaps = 14/220 (6%)

Query: 240 LLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYS 292
           L VY  GW     LG  N++    P+ V    A+  L + +  C ++H L VT  GEV S
Sbjct: 85  LQVYSWGWGDFGRLGHGNSSDVFTPQPV---KALQGLKIKQIACGDSHCLAVTMAGEVQS 141

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG  ++G+LG G T     P+ I        V  ++AG  H+AAVTEDG LY WG G +G
Sbjct: 142 WGRNQNGQLGLGTTEDSLLPQKIQA-FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYG 200

Query: 353 RLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            LG GD   R  P  V+  E   +  V+CG  HT+ +S  G+ +++ G    G+LGH D 
Sbjct: 201 NLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN-LYTYGWSKYGQLGHGDF 259

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
                P  +EAL+   + ++  G   ++ALT +G ++ WG
Sbjct: 260 EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWG 299



 Score = 87.4 bits (215), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 24/281 (8%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS----KVYTWGCN----LHHQILDEVR 206
           GD +     T +     P +T  I   D + A+S    +VY+WG      L H    +V 
Sbjct: 48  GDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVF 107

Query: 207 GKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP 263
                  LQ L   I+ I  G      +   G +  +G+   G LGL  T    LP+++ 
Sbjct: 108 TPQPVKALQGL--KIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQ 165

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
              ++    ++  +E H   VT +G++Y WG G +G LG G+   +  P+ +   + G++
Sbjct: 166 AFESVCVKMIAAGAE-HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSS-VEGEK 223

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE 381
           +  V+ G  H+  V++ G LYT+G   +G+LGHGD +    P  V  L D  +  +S G 
Sbjct: 224 MVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGW 283

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLG------HEDTGKVTTP 416
            HT+ L+ +G  ++  G    G++G      H   G+V+ P
Sbjct: 284 RHTMALTSEG-KLYGWGWNKFGQVGVGNNDDHSSPGQVSFP 323


>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
          Length = 441

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 163/359 (45%), Gaps = 41/359 (11%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE------------------ 287
           G LG      + LP+ + L  ++ S+S+  C  AHV+ +TS                   
Sbjct: 26  GQLGTTKLQDELLPQLLSL-TSLPSISMLACGGAHVIALTSGKPPKISLIKGMLLVLVQV 84

Query: 288 ---------GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV-TQVSAGHSHSAAV 337
                    G+V++WG G  G+LGHG+ L+   PKL+    +   V TQ +AG SHS  V
Sbjct: 85  NILIMLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVS--FFDDSVITQAAAGWSHSGFV 142

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
           ++ G ++T G G  G+LGHGD  S  TP  V+  ++  V  V+CG  H+LVL   G+ V 
Sbjct: 143 SDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFA-GNQVC 201

Query: 396 SMGSGNLGKLGH--EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
             GSG  G+LG   +    V  P V+  L+   V ++ A    S A++ DG  F WG G 
Sbjct: 202 GFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGF 261

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
                  H P  +   S     +V++G +H L L+   EV+  GS    Q  +       
Sbjct: 262 -CGGPDVHAPQSLP--SPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDS 318

Query: 514 DQP--SKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
            +    KV   + V V QI AG+  S A T     + L    +    +++  TF  + E
Sbjct: 319 SEALFEKVPDFDGVKVMQIAAGAEHSAAVTGKRGGAILLFLSSLHSANIKQTTFECLAE 377



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 120/266 (45%), Gaps = 43/266 (16%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTE-------- 339
           +V+SWG G  G+LG      +  P+L+ +  L    ++ ++ G +H  A+T         
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSL--PSISMLACGGAHVIALTSGKPPKISL 73

Query: 340 -------------------DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVS 378
                               G ++TWG G  G+LGHGD+ +   P LV+   D  +   +
Sbjct: 74  IKGMLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAA 133

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
            G SH+  +S  G  +++ G+G+ G+LGH DT  ++TP  +       V+ V  G   S+
Sbjct: 134 AGWSHSGFVSDSG-CIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSL 192

Query: 439 ALTWDGLVFWWG------LGLRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
            L     V  +G      LG  S  I S + P +V+GL   ++V +S    H  A+S   
Sbjct: 193 VLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADG 252

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPS 517
           + ++WG    G CG  +   P   PS
Sbjct: 253 QFFSWG---RGFCGGPDVHAPQSLPS 275



 Score = 70.5 bits (171), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 34/234 (14%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLV--TELSDVGAVSCGESHTLVLSQD---------- 390
           +++WG G  G+LG   L+    P L+  T L  +  ++CG +H + L+            
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGKPPKISLIKG 76

Query: 391 ----------------GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
                           G  V++ G G+ G+LGH D   +T PK++       + +  AG 
Sbjct: 77  MLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGW 136

Query: 435 SFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S S  ++  G +F  G G         ++S  TP  V+  ++  +  V+ G  H L L  
Sbjct: 137 SHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFA 196

Query: 490 YNEVYAWGSNTMGQCG-QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            N+V  +GS   GQ G   +    V+ P  V GL+DV V +I A    S A + 
Sbjct: 197 GNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISA 250



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 20/223 (8%)

Query: 233 LLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPL-EAAIVSLSVSKCSEAHVLTVTSEG 288
           +L + G +  +G+G    LG  +     LPK V   + ++++ + +  S  H   V+  G
Sbjct: 89  MLFAGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWS--HSGFVSDSG 146

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            +++ G G  G+LGHG+TLS   P  +        V  V+ G  HS  +     +  +G 
Sbjct: 147 CIFTCGNGSFGQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGS 205

Query: 349 GDHGRLGHGD--LKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G  G+LG     +KS + P +V+ L DV  V  S    H+  +S DG   +S G G  G 
Sbjct: 206 GKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQ-FFSWGRGFCGG 264

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
                   V  P+ + +   F  R+V  G + ++ LT DG VF
Sbjct: 265 P------DVHAPQSLPSPLSF--REVAVGWNHALLLTVDGEVF 299



 Score = 44.3 bits (103), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 49/236 (20%)

Query: 126 THYQVDLIRS-ACLVYLILVTLADDNIKPLGDRKSSN---SNTDIDSTSTPKLTYNIGDT 181
           +H+  D ++  AC +   LV  A + +   G  K      S+  I S + P +   + D 
Sbjct: 174 SHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV 233

Query: 182 DI-SVAHSKVYTWGCNLHHQILDEVRGKCSRPRL---QSLPS--NIRHIEAGQFCTFLLD 235
           ++  ++ +  ++   +   Q     RG C  P +   QSLPS  + R +  G     LL 
Sbjct: 234 EVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWNHALLLT 293

Query: 236 STGGLLVYG--------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
             G +   G        K  L + ++  + L ++VP    +  + ++  +E H   VT +
Sbjct: 294 VDGEVFKLGSTLNKQPEKQQLQIDSS--EALFEKVPDFDGVKVMQIAAGAE-HSAAVTGK 350

Query: 288 ----------------------------GEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
                                       GEV +WG GEHG+LG GNT  Q  P+L+
Sbjct: 351 RGGAILLFLSSLHSANIKQTTFECLAENGEVKTWGWGEHGQLGLGNTNDQTSPELV 406



 Score = 43.1 bits (100), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 48/172 (27%)

Query: 234 LDSTGGLLVYGKGWLGLANT-TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
           + + G    +G+G+ G  +    Q LP  +      V  +       H L +T +GEV+ 
Sbjct: 248 ISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAVGWN-------HALLLTVDGEVFK 300

Query: 293 WGV-------GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT------- 338
            G         +  ++     L ++ P        G +V Q++AG  HSAAVT       
Sbjct: 301 LGSTLNKQPEKQQLQIDSSEALFEKVPDF-----DGVKVMQIAAGAEHSAAVTGKRGGAI 355

Query: 339 ---------------------EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
                                E+G + TWG G+HG+LG G+   + +P LV+
Sbjct: 356 LLFLSSLHSANIKQTTFECLAENGEVKTWGWGEHGQLGLGNTNDQTSPELVS 407


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV----------T 325
            C   H   +T +  +Y++G GE G+LGHGN      P  +  G +   +           
Sbjct: 1750 CGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSV--GYFTSLIEAEGVDVGGVV 1807

Query: 326  QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
            +VS G  H+ AVT  G L+ +G G+ GRLG G+  S   PT VT+L ++ AV+CG  HTL
Sbjct: 1808 EVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIAAVACGREHTL 1867

Query: 386  VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
             L++ G  V++ G+G  G+LG+        P  ++ L  +R+  + AG   S AL+ +G 
Sbjct: 1868 ALTRKGR-VFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALSTEGD 1926

Query: 446  VFWWGLGLRSSSISFH-------TPVLVTGLSSHQIVD--------------VSIGDSHV 484
            V  WG G  SS    H        P  + G  +   +D              ++ G  H 
Sbjct: 1927 VLTWGFG--SSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT 1984

Query: 485  LALSQYNEVYAWGSNTMGQCGQDNFSNP---VDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            LA +    +Y WG    GQ   +  + P   V  P ++    +  +R +  G+  S   T
Sbjct: 1985 LAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRSVACGTFTSAVCT 2044



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 20/216 (9%)

Query: 322  KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV------- 374
            +RV Q++ G+ H+A +T+D  LYT+G G+ GRLGHG+ +    P  V   + +       
Sbjct: 1743 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVD 1802

Query: 375  ----GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
                  VSCG  HT+ ++  G  ++  G G  G+LG  +TG    P  +  L+   +  V
Sbjct: 1803 VGGVVEVSCGREHTMAVTASGD-LFGFGWGEAGRLGTGETGSSLYPTRVTDLQN--IAAV 1859

Query: 431  CAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
              G   ++ALT  G VF +G G        S      P  V GL  ++I  +  G+ H  
Sbjct: 1860 ACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSC 1919

Query: 486  ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            ALS   +V  WG  + G  G  +  N + +P ++ G
Sbjct: 1920 ALSTEGDVLTWGFGSSGALGHGDRDNCL-EPRRIEG 1954



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 28/247 (11%)

Query: 227  GQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT 283
            G+  T  + ++G L  +G    G LG   T     P RV     + +++   C   H L 
Sbjct: 1812 GREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRV---TDLQNIAAVACGREHTLA 1868

Query: 284  VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
            +T +G V+++G G  G+LG+G+   +  P   + GL   R+  + AG  HS A++ +G +
Sbjct: 1869 LTRKGRVFAFGAGFGGRLGNGSETDEELP-FAVQGLEDYRIAAIDAGECHSCALSTEGDV 1927

Query: 344  YTWGEGDHGRLGHGDLKSRHTPTLV----------------TELSDVGAVSCGESHTLVL 387
             TWG G  G LGHGD  +   P  +                +E S V A++CG  HTL  
Sbjct: 1928 LTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAA 1987

Query: 388  SQDGHTVWSMGSGNLGKLGHEDTGK----VTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            + DG  ++  G    G+L  E        V TP+ I       +R V  GT  S   T  
Sbjct: 1988 TSDG-ALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRSVACGTFTSAVCTNQ 2046

Query: 444  GLVFWWG 450
            G +F WG
Sbjct: 2047 GHLFLWG 2053



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 20/184 (10%)

Query: 371  LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-------KVIEA-- 421
            L  V  ++CG  HT +++ D H +++ G G  G+LGH +    T P        +IEA  
Sbjct: 1742 LRRVVQIACGYRHTALITDDRH-LYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLIEAEG 1800

Query: 422  LRKFRVRKVCAGTSFSVALTWDG--LVFWWG----LGLRSSSISFHTPVLVTGLSSHQIV 475
            +    V +V  G   ++A+T  G    F WG    LG   +  S + P  VT L    I 
Sbjct: 1801 VDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLY-PTRVTDL--QNIA 1857

Query: 476  DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
             V+ G  H LAL++   V+A+G+   G+ G  + ++  + P  V GLED  +  I AG  
Sbjct: 1858 AVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDE-ELPFAVQGLEDYRIAAIDAGEC 1916

Query: 536  FSIA 539
             S A
Sbjct: 1917 HSCA 1920


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 161/345 (46%), Gaps = 38/345 (11%)

Query: 185 VAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +A   V+ WG N    + L +  G    P      + +R + AG+  +  + + G ++ +
Sbjct: 493 LADGTVWAWGDNSFSALGLGDEPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAW 552

Query: 244 GKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G G    LG  + +I  +P+ +   + I ++++      + L +  +G V+SWG    G+
Sbjct: 553 GYGLFGQLGSESASIFQIPEPIFGLSGITAVAMGHW---YSLALREDGTVWSWGYNASGQ 609

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G T  + RP  + G     +VT ++AG SH+ A+  DG ++ WG    G LG G   
Sbjct: 610 LGDGTTDERPRPGQVAGL---TQVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQT 666

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           SR TP  V  L+ V AV+ GE H+L L +DG TVWS G+ N G+LG        +P  + 
Sbjct: 667 SRSTPVQVQGLTGVIAVAAGEYHSLALREDG-TVWSWGNNNEGQLGDVTASSRQSPGQVP 725

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL--------RSSSISFHTPVLV 466
            L    V+++ AG   ++A    G +  +G      LGL        R    S   P   
Sbjct: 726 GLAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIASLRNP--- 780

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
                     ++ G +H LA++    V+AWG+N  GQ G    +N
Sbjct: 781 --------RGIAAGIAHTLAVAADGTVWAWGANATGQLGNGEAAN 817



 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 110/223 (49%), Gaps = 15/223 (6%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           V  VSAG+ H+ A+  DG ++ WG    G+LG G   SR TP  V  L++V AVS     
Sbjct: 177 VRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAGYS 236

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +L L +DG TVW+ G    G+LG        TP  ++ L   RV  + AG   S+A+  D
Sbjct: 237 SLALRKDG-TVWAWGDNESGQLGDGTMEGRLTP--VQVLDLVRVTGLAAGRGHSLAVLAD 293

Query: 444 GLVFWWG------LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           G V  WG      LG    S+  +  PV V+ L+   +V V+   S   A+     V +W
Sbjct: 294 GTVRAWGANIYGQLGDGGFSLEGNPRPVAVSKLT--DVVSVAASTSLSFAVHSDGTVSSW 351

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           GSN  G  G +  SN    PSKV GL DV    +  G  +++A
Sbjct: 352 GSNVDGALGVEQRSNS-RVPSKVFGLTDVAT--VSVGGYYAVA 391



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 158/358 (44%), Gaps = 19/358 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N   Q+ D  +   S P      + +  + A  + +  L   G +  +G    G
Sbjct: 196 VWAWGSNFAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAGYSSLALRKDGTVWAWGDNESG 255

Query: 250 -LANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            L + T++   +  P++   +V ++       H L V ++G V +WG   +G+LG G   
Sbjct: 256 QLGDGTMEG--RLTPVQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFS 313

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
            +  P+ +        V  V+A  S S AV  DG + +WG    G LG     +   P+ 
Sbjct: 314 LEGNPRPVAVSKL-TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSK 372

Query: 368 VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
           V  L+DV  VS G  + + L  DG TV S G+ + G+LG + T    TP  +  L    V
Sbjct: 373 VFGLTDVATVSVGGYYAVALMGDG-TVRSWGNNDSGQLG-DGTYIRHTPTPVPGLTG--V 428

Query: 428 RKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
             V AG    VA+  DG    WG      LG    S++   PV V GL+   +  V+ G 
Sbjct: 429 TAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEASL--VAAGK 486

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +H LAL     V+AWG N+    G  +   P   P+ V   +   VR + AG   S+A
Sbjct: 487 THSLALLADGTVWAWGDNSFSALGLGD--EPGASPTPVQVPKLAGVRSLAAGENSSLA 542



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 10/234 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V++WG N   Q+ D    +  RP   +  + +  I AG      L + G +  +G    G
Sbjct: 599 VWSWGYNASGQLGDGTTDERPRPGQVAGLTQVTAIAAGASHALALRADGTVWAWGSNALG 658

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG    T +  P +V     +++++     E H L +  +G V+SWG    G+LG    
Sbjct: 659 TLGDGTQTSRSTPVQVQGLTGVIAVA---AGEYHSLALREDGTVWSWGNNNEGQLGDVTA 715

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            S++ P  + G L G  V +++AG  H+ A  E G L  +G+   G+LG G+ K   +  
Sbjct: 716 SSRQSPGQVPG-LAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRG 772

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            +  L +   ++ G +HTL ++ DG TVW+ G+   G+LG+ +      P  ++
Sbjct: 773 EIASLRNPRGIAAGIAHTLAVAADG-TVWAWGANATGQLGNGEAANSPQPITVK 825



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 13/188 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A   V+ WG N    + D  +   S P ++Q L + +  + AG++ +  L   G +  +G
Sbjct: 645 ADGTVWAWGSNALGTLGDGTQTSRSTPVQVQGL-TGVIAVAAGEYHSLALREDGTVWSWG 703

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              +G LG    + +  P +VP  A +  ++     E H L     G + ++G    G+L
Sbjct: 704 NNNEGQLGDVTASSRQSPGQVPGLAGVQRIA---AGEKHALAAVEGGPLVAFGKNTSGQL 760

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQ-VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           G    L +R+     G +   R  + ++AG +H+ AV  DG ++ WG    G+LG+G+  
Sbjct: 761 G----LGERKENQSRGEIASLRNPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNGEAA 816

Query: 361 SRHTPTLV 368
           +   P  V
Sbjct: 817 NSPQPITV 824


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 14/263 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +      P+R+ + +    +S+S  S  HV+ VTS+GEVYSWG   + +LG+G+
Sbjct: 51  GCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGS 110

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P  +   L  K+   V+ G  HS  +T DG +Y WG  + G++G G   ++  P
Sbjct: 111 TNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIP 170

Query: 366 TLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             VT       V  ++CG+  ++ +  +G  V++ G    G+LG   +G   TP  I AL
Sbjct: 171 RKVTSCLQNKTVIGIACGQMSSMAVVDNGE-VYAWGYNGNGQLGLGSSGNQPTPCRIAAL 229

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
           +  RV +V  G + ++ALT +G+++ WG      LG  + S   + PV V  +   +IV+
Sbjct: 230 QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSY-PVQVI-VDKERIVE 287

Query: 477 V-SIGDSHV-LALSQYNEVYAWG 497
           + +   SH   A SQ  +VY WG
Sbjct: 288 IAACHSSHTSAAKSQSGQVYMWG 310



 Score =  113 bits (283), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           VL +T   EV+  G    G LG G+  S   P+ I   L GKR+  +S G   H   VT 
Sbjct: 33  VLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI-DMLSGKRIVSLSYGSGPHVVIVTS 91

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TELSDVGAVS--CGESHTLVLSQDGHTVWS 396
           DG +Y+WG   + +LG+G      +P  V T L +  A+S  CG  H++VL+ DG  V++
Sbjct: 92  DGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGE-VYA 150

Query: 397 MGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T     P KV   L+   V  +  G   S+A+  +G V+ WG     
Sbjct: 151 WGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNG 210

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL SS  +  TP  +  L   ++  V  G +H LAL+    +YAWG+N+ GQ G  N 
Sbjct: 211 QLGLGSSG-NQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNK 269

Query: 510 SN 511
           SN
Sbjct: 270 SN 271



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 15/260 (5%)

Query: 155 GDRKSSNSNTDIDSTSTPK---LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCS 210
           GD +S      ID  S  +   L+Y  G    I  +  +VY+WG N + Q+ +    +  
Sbjct: 56  GDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQAL 115

Query: 211 RPRLQS---LPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPL 264
            P   S   +      +  G   + +L   G +  +G    G +G  +T  QP+P++V  
Sbjct: 116 SPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTS 175

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
                ++    C +   + V   GEVY+WG   +G+LG G++ +Q  P  I   L G RV
Sbjct: 176 CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRV 234

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP--TLVTELSDVGAVSCGES 382
            QV  G++H+ A+T++G++Y WG   +G+LG G+  ++  P   +V +   V   +C  S
Sbjct: 235 EQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294

Query: 383 HT-LVLSQDGHT-VWSMGSG 400
           HT    SQ G   +W    G
Sbjct: 295 HTSAAKSQSGQVYMWGQCRG 314


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 165/341 (48%), Gaps = 22/341 (6%)

Query: 190 VYTWGCNLHHQILDEV-RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N   Q+ D   R K S  ++  L + +  + AG   +  LD+ G +  +G    
Sbjct: 71  VFAWGFNRLGQLGDGTSRDKASPVQVAGL-TQVTSVAAGDQYSLALDADGAVWAWGDNAS 129

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG    T + LP+RV   + +VSL+      AHVL + ++G V++WG   + +LG G 
Sbjct: 130 GQLGDGTLTSRLLPQRVSALSNVVSLA---SGFAHVLALRADGTVWAWGDNRNNQLGDG- 185

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           TL++    L + GL G  V  V AG S S A+  DG L+ WG+  +G+LG G    R TP
Sbjct: 186 TLTRSSVPLQVPGLSG--VVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITP 243

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  L  V +VS G  H L L  DG TVW+ G    G+LG     + T P  +      
Sbjct: 244 VQVASLDSVVSVSVGAYHALALRADG-TVWAWGHNAYGQLGDGTNTQRTQPVSVSLT--- 299

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
            VR + AG   S+A+  DG V+ WG      L + +++     L  G++    V +  G 
Sbjct: 300 DVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSPLPLQAGMTGG--VTLVAGY 357

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            H +AL      ++WG N  GQ G   F  P   P +V GL
Sbjct: 358 RHSVALGADGTAWSWGDNVFGQLGDTTF-EPRMAPVQVSGL 397



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 182/412 (44%), Gaps = 74/412 (17%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+ WG N + Q+ D    + ++P   SL +++R + AG + +  + + G +  +G 
Sbjct: 267 ADGTVWAWGHNAYGQLGDGTNTQRTQPVSVSL-TDVRTLVAGNYHSLAVRTDGAVWAWGD 325

Query: 246 G---WLGLANTTIQPLP------------------------------------------- 259
                LG  N T  PLP                                           
Sbjct: 326 NRYRQLGTGNLTSSPLPLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTF 385

Query: 260 --KRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
             +  P++ + ++L  +  +    H + + + G +++WG  + G+LG+G       P  +
Sbjct: 386 EPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPV 445

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
                   V  V++G+ H+AA+  DG ++TWG    G+LG G +  R TP  V  L  V 
Sbjct: 446 ----NLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVGLGGVT 501

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           A++ G++H+L L  +G TVW+ G    G+LG  D   V   + ++A     +  + AG S
Sbjct: 502 AIATGDNHSLALRSNG-TVWAWGFNRYGQLG--DGTAVDRRQPVQASGLSNIVAIAAGGS 558

Query: 436 FSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S+AL  DG V+ +G         G R+ ++    PV   GLSS  +V ++ G  + LAL
Sbjct: 559 HSLALRSDGTVWAFGYNFDGQLGNGTRTWTL---VPVQAVGLSS--VVSLAAGSLYSLAL 613

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                V+AWG N  GQ G         QP +V GL  +    I AGS  S+A
Sbjct: 614 RADGTVWAWGYNASGQLGVGTTQGSA-QPLQVPGLSGIT--SIAAGSYHSLA 662



 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 157/331 (47%), Gaps = 26/331 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHI---EAGQFCTFLLDSTGGLLV 242
           A+ +++ WG N   Q+ +  +   S P    LP N+  +    +G   T  L S G +  
Sbjct: 416 ANGRLWAWGDNQQGQLGNGTQQDSSLP----LPVNLTDVISVASGYRHTAALRSDGTVWT 471

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G    G LG    T +P P +V     + +++     + H L + S G V++WG   +G
Sbjct: 472 WGMNRFGQLGEGTVTDRPTPVQVVGLGGVTAIA---TGDNHSLALRSNGTVWAWGFNRYG 528

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           +LG G  + +R+P +   GL    +  ++AG SHS A+  DG ++ +G    G+LG+G  
Sbjct: 529 QLGDGTAVDRRQP-VQASGL--SNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTR 585

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
                P     LS V +++ G  ++L L  DG TVW+ G    G+LG   T     P  +
Sbjct: 586 TWTLVPVQAVGLSSVVSLAAGSLYSLALRADG-TVWAWGYNASGQLGVGTTQGSAQPLQV 644

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQI 474
             L    +  + AG+  S+AL  DG V+ WG          +S    +P LV G+S+   
Sbjct: 645 PGLSG--ITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPGLVAGMSN--A 700

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           V +  GD H LA+     V+AWG N  GQ G
Sbjct: 701 VAIIAGDQHSLAMKADGTVWAWGLNIKGQLG 731



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 98/266 (36%), Positives = 136/266 (51%), Gaps = 19/266 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L V S+G V++WG    G+LG G +  +  P  + G     +VT V+AG  +S A+  
Sbjct: 61  HSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL---TQVTSVAAGDQYSLALDA 117

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG+   G+LG G L SR  P  V+ LS+V +++ G +H L L  DG TVW+ G 
Sbjct: 118 DGAVWAWGDNASGQLGDGTLTSRLLPQRVSALSNVVSLASGFAHVLALRADG-TVWAWGD 176

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
               +LG     + + P  +  L    V  V AG S S+AL  DG ++ WG      LG 
Sbjct: 177 NRNNQLGDGTLTRSSVPLQVPGLSG--VVAVVAGGSSSLALRADGTLWAWGDNRYGQLG- 233

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
             +++   TPV V  L S     VS+G  H LAL     V+AWG N  GQ G D  +   
Sbjct: 234 DGTTVRRITPVQVASLDSVVS--VSVGAYHALALRADGTVWAWGHNAYGQLG-DGTNTQR 290

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIA 539
            QP  V  L D  VR + AG+  S+A
Sbjct: 291 TQPVSVS-LTD--VRTLVAGNYHSLA 313



 Score =  100 bits (250), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 10/240 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           ++  V+ WG N + Q+ D       +P   S  SNI  I AG   +  L S G +  +G 
Sbjct: 515 SNGTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGY 574

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG    T   +P +    +++VSL+       + L + ++G V++WG    G+LG
Sbjct: 575 NFDGQLGNGTRTWTLVPVQAVGLSSVVSLAAGSL---YSLALRADGTVWAWGYNASGQLG 631

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G T    +P L + GL G  +T ++AG  HS A+  DG ++ WG    G+LG+G    R
Sbjct: 632 VGTTQGSAQP-LQVPGLSG--ITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPR 688

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            +P LV  +S+  A+  G+ H+L +  DG TVW+ G    G+LG  DT +   P  ++ +
Sbjct: 689 LSPGLVAGMSNAVAIIAGDQHSLAMKADG-TVWAWGLNIKGQLGTGDTTEAWFPVQVQGI 747



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 165/413 (39%), Gaps = 76/413 (18%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+ WG N ++Q+ D    + S P      S +  + AG   +  L + G L  +G 
Sbjct: 167 ADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGVVAVVAGGSSSLALRADGTLWAWGD 226

Query: 246 ---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG   T  +  P +V   A++ S+        H L + ++G V++WG   +G+LG
Sbjct: 227 NRYGQLGDGTTVRRITPVQV---ASLDSVVSVSVGAYHALALRADGTVWAWGHNAYGQLG 283

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVS---AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
            G    + +P  +        +T V    AG+ HS AV  DG ++ WG+  + +LG G+L
Sbjct: 284 DGTNTQRTQPVSV-------SLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNL 336

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            S   P        V  V  G  H++ L  DG T WS G    G+LG         P  +
Sbjct: 337 TSSPLPLQAGMTGGVTLV-AGYRHSVALGADG-TAWSWGDNVFGQLGDTTFEPRMAPVQV 394

Query: 420 EALRKFR------------------------------------------------VRKVC 431
             L   R                                                V  V 
Sbjct: 395 SGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLPVNLTDVISVA 454

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLA 486
           +G   + AL  DG V+ WG+     L   +++   TPV V GL    +  ++ GD+H LA
Sbjct: 455 SGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVGLGG--VTAIATGDNHSLA 512

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           L     V+AWG N  GQ G D  +    QP +  GL ++    I AG   S+A
Sbjct: 513 LRSNGTVWAWGFNRYGQLG-DGTAVDRRQPVQASGLSNIVA--IAAGGSHSLA 562



 Score = 77.0 bits (188), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 91/185 (49%), Gaps = 18/185 (9%)

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQ 389
           G  HS AV  DG ++ WG    G+LG G  + + +P  V  L+ V +V+ G+ ++L L  
Sbjct: 58  GQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQVTSVAAGDQYSLALDA 117

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           DG  VW+ G    G+LG         P+ + AL    V  + +G +  +AL  DG V+ W
Sbjct: 118 DG-AVWAWGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALRADGTVWAW 174

Query: 450 G------LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           G      LG   L  SS+    P+ V GLS   +V V  G S  LAL     ++AWG N 
Sbjct: 175 GDNRNNQLGDGTLTRSSV----PLQVPGLSG--VVAVVAGGSSSLALRADGTLWAWGDNR 228

Query: 501 MGQCG 505
            GQ G
Sbjct: 229 YGQLG 233


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 156/334 (46%), Gaps = 21/334 (6%)

Query: 246 GWLGLANTTIQPLP-KRVP--LEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           GWLG+A       P +R P  LEA   + L  +   E H L + S   VYS G    G+L
Sbjct: 152 GWLGIAGMYFTWAPGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQL 211

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +  S +RP+ I   L    +  VS G  HS AV   G ++TWG G  G+LG G+ K 
Sbjct: 212 GQKSPQSTKRPEPIQ-ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKE 270

Query: 362 -RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPK 417
               PT +  L+ +    VSCG  H+L LS+DG  V+S GS   G+LG   +     +P+
Sbjct: 271 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQ-VFSWGSNRQGQLGLGNNLCSQASPQ 329

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGL 469
            +++L    + +V AG + S AL+  G  F WG        L   S+    + P  +  L
Sbjct: 330 KVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGAL 389

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            +  +V +S G  H   L++  +V+ +G ++  Q  Q +  +    P  + G+    V Q
Sbjct: 390 KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-QHSPRSGRGGPQLIEGIGG-HVSQ 447

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
           I  GS  +IAY V  +   +S    P C     H
Sbjct: 448 IECGSYHTIAY-VYTTGQVVSLGRGPSCTSNATH 480



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 21/313 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           ++ +VY+ G N   Q+  +      RP  +Q+L + +I  +  G+  +  +   G +  +
Sbjct: 196 SNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTW 255

Query: 244 G---KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LG+  +  I  +P ++   A I  + VS C   H L ++ +G+V+SWG    G
Sbjct: 256 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVS-CGHYHSLALSEDGQVFSWGSNRQG 314

Query: 300 KLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---G 355
           +LG GN L SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L   G
Sbjct: 315 QLGLGNNLCSQASPQKVK-SLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSG 373

Query: 356 HGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           +   +  + P  +  L   +V  +SCG  HT VL++DG  V++ G  +  +L H      
Sbjct: 374 NSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQ-VFTFGGSSSEQLQHSPRSGR 432

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG---- 468
             P++IE +    V ++  G+  ++A  +  G V   G G   +S + H     +     
Sbjct: 433 GGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCL 491

Query: 469 LSSHQIVDVSIGD 481
           LS+  +VD+ + D
Sbjct: 492 LSAKDLVDIEVKD 504


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  120 bits (301), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 92/269 (34%), Positives = 131/269 (48%), Gaps = 25/269 (9%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           V +WG GE G+LG G    +  P  +   G Y   VT V AG  +S A+ +DG L+TWG 
Sbjct: 10  VLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYA--VTAVVAGSRNSLAICDDGRLFTWGW 67

Query: 349 GDHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              G LGH  + K+  +P  V  L+    V  + G  H L +   G   ++ G    G+ 
Sbjct: 68  NQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRA-YAWGGNEYGQC 126

Query: 406 GHEDTGKVTTPKVIEALR-----------KFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           G E   K    +   ALR           K +VR+V AG + SV LT +G V+ WG    
Sbjct: 127 GEEPERKEDGTR---ALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWP 183

Query: 455 SSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
              I    TPV V GL   ++  +++G  H LAL++   ++AWG+N  GQ G  + + P 
Sbjct: 184 PGDIKQISTPVRVQGLEKVRV--IAVGAFHNLALTEDVILWAWGNNEYGQLGTGD-TQPR 240

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            QP +V GL D+ +  I AG   S A T+
Sbjct: 241 SQPIRVEGLSDLSLVDIAAGGWHSTALTI 269



 Score =  115 bits (288), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 18/239 (7%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLG------HGNTLSQRRPKLIMGGLYGK-RVTQVSAGHS 332
           H L V  +G  Y+WG  E+G+ G         T + RR   I      K +V QV+AG +
Sbjct: 105 HCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGT 164

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           HS  +T++G ++TWG+        GD+K   TP  V  L  V  ++ G  H L L++D  
Sbjct: 165 HSVVLTQEGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVRVIAVGAFHNLALTED-V 219

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
            +W+ G+   G+LG  DT   + P  +E L    +  + AG   S ALT DG V+ WG  
Sbjct: 220 ILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRG 279

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
               LG      S   P+ V  L+   IV VS G +H +AL++   ++++G    G+ G
Sbjct: 280 EHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLG 338



 Score =  104 bits (259), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 30/277 (10%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           L +  +G +++WG  + G LGH   T ++  P  +   L G ++ Q + G  H  AV + 
Sbjct: 54  LAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPV-DALAGFKIVQAAIGGWHCLAVDDK 112

Query: 341 GLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELS---------DVGAVSCGESHTLVLSQD 390
           G  Y WG  ++G+ G   + K   T  L  ++           V  V+ G +H++VL+Q+
Sbjct: 113 GRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGGTHSVVLTQE 172

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           GH VW+ G          D  +++TP  ++ L K RV  +  G   ++ALT D +++ WG
Sbjct: 173 GH-VWTWGQ----PWPPGDIKQISTPVRVQGLEKVRV--IAVGAFHNLALTEDVILWAWG 225

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                 LG   +      P+ V GLS   +VD++ G  H  AL+   EVYAWG    G+ 
Sbjct: 226 NNEYGQLGTGDTQPR-SQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRL 284

Query: 505 --GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             G D  S+ V    +++  ED+   Q+  G   S+A
Sbjct: 285 GFGDDKSSHMVPLKVELLAGEDIV--QVSCGGTHSVA 319



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 25/217 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG       + ++    S P R+Q L   +R I  G F    L     L  +G    
Sbjct: 175 VWTWGQPWPPGDIKQI----STPVRVQGL-EKVRVIAVGAFHNLALTEDVILWAWGNNEY 229

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG  +T  +  P RV     +  LS+   +    H   +T +GEVY+WG GEHG+LG 
Sbjct: 230 GQLGTGDTQPRSQPIRV---EGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGRLGF 286

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSR 362
           G+  S     L +  L G+ + QVS G +HS A+  DG ++++G GDHGRLG+G  + + 
Sbjct: 287 GDDKSSHMVPLKVELLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTTG 346

Query: 363 HTPTLVTELSDVGA----------VSCGESHTLVLSQ 389
           H   L   L  + +          V+CG  HTL +++
Sbjct: 347 HPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIAE 383


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      ++ AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    Q++AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +     +  C     S  +   G ++ +GLG
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+  +V  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + ++ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   QI AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343



 Score = 47.4 bits (111), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL +  I +I  G+  T  L   GG+  +G G 
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 331 STSNRKSPFTVKGNWF 346


>gi|449662010|ref|XP_002161644.2| PREDICTED: uncharacterized protein LOC100207375 [Hydra
           magnipapillata]
          Length = 677

 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 149/309 (48%), Gaps = 34/309 (11%)

Query: 255 IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKL 314
           ++ LP ++ +    V L        H+  +++E  +++WG    G+LG G+   + +P  
Sbjct: 30  VKGLPNKIQITEVSVGL-------GHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQPTE 82

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-- 372
           I   L GK V  V+ G+  +A +T++GL+ T G+G+ G LGHGD  S +TP LV EL   
Sbjct: 83  IES-LRGKCVISVACGNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTL 141

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE-ALRKFRVRKVC 431
           D+ ++  G +H  + + DG  V++ G G  G+ GH     +  PK++     K  ++ V 
Sbjct: 142 DITSLVAGSNHVAITTSDGK-VYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQ 200

Query: 432 AGTSFSVALTWDGLVFWWG------LGL----------RSSSI-----SFHTPVLVTGLS 470
             ++ +V ++  G +F  G      LGL          RS S          P LV    
Sbjct: 201 CSSNGTVFISDAGNLFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSC 260

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
            +QI  +  G SH   +S   +VY  G N  GQ G  N   P +  S V GLE+V V  I
Sbjct: 261 KYQISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNL-KPRELLSNVKGLEEVSVTTI 319

Query: 531 CAGSLFSIA 539
             GS FS+A
Sbjct: 320 ACGSSFSMA 328



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 445 LVFWWGLGLRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           L+++W        +S     LV GL +  QI +VS+G  H+  +S    ++ WG N+ GQ
Sbjct: 16  LLYYW-------DVSTMQLFLVKGLPNKIQITEVSVGLGHLAVISTERGIFTWGDNSFGQ 68

Query: 504 CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            G  + + P +QP+++  L   CV  +  G+ F+   T
Sbjct: 69  LGVGD-NEPRNQPTEIESLRGKCVISVACGNYFTAFLT 105



 Score = 45.1 bits (105), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 29/199 (14%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN---IRHIEAGQFCTFLLDSTGG 239
           I+ +  KVYTWGC L  +           P+L S  +    I++++     T  +   G 
Sbjct: 155 ITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISDAGN 214

Query: 240 LLVYGKGW---LGL-----------ANTTIQPLPK-RVPL---EAAIVSLSVSKCSEAHV 281
           L   G      LGL           + ++   + K +VP     +    +S  +   +H 
Sbjct: 215 LFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSCKYQISTMQFGTSHC 274

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED- 340
             ++ +G+VY+ G  E+G+LG GN L  R     + GL    VT ++ G S S A     
Sbjct: 275 TMMSVDGKVYTNGENEYGQLGCGN-LKPRELLSNVKGLEEVSVTTIACGSSFSMAGIHTQ 333

Query: 341 ------GLLYTWGEGDHGR 353
                  L+Y WG     R
Sbjct: 334 LKEHPLNLIYFWGTKPQKR 352


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 168/363 (46%), Gaps = 35/363 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   Q+ DE     S P +Q L  S +  + AG      L   G +  +G    
Sbjct: 69  VWAWGSNASGQLGDETTISRSTP-VQVLGLSGVLFVAAGSSHVLALRYDGTVWAWGSNSS 127

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G  G   T  + LP +    + +++++     + H L V S+G  ++WG    G+LG G 
Sbjct: 128 GQRGDGTTNNRALPVQAQGLSGVMAVA---AGDNHSLAVRSDGSAWAWGSNASGQLGEGT 184

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T ++  P  + G L G  V  V+AG +HS AV  DG ++ WG    G+LG G    R  P
Sbjct: 185 TSNRPEPVQVQG-LSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVP 241

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  LS V AV+ G  H+L +  DG TVW  G  +  +LG     ++  P  ++ L   
Sbjct: 242 VQVQGLSGVVAVAAGHHHSLAVRNDG-TVWGWGRNDSNQLGKGSM-RLLVPAQVQGLSA- 298

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLG------LRSSSISFH---TPVLVTGLSSHQIVD 476
            V  V AG + S+A+  DG V  W +G      L   + ++     PVL        +V 
Sbjct: 299 -VVAVAAGDTHSLAVGSDGTV--WAVGSNNNGQLGDGTTTYRLVPVPVL------SGVVS 349

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           V+  D H LA+     V+AWG N+ GQ G D  +     P +V GL +V    + AG   
Sbjct: 350 VAANDYHSLAVRSDGTVWAWGYNSTGQLG-DGTTTTRLVPVQVSGLSEVV--SVVAGGYH 406

Query: 537 SIA 539
           S+A
Sbjct: 407 SLA 409



 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 162/373 (43%), Gaps = 70/373 (18%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q  D      + P      S +  + AG   +  + S G    +G    G
Sbjct: 119 VWAWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDGSAWAWGSNASG 178

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   T+ +P P +V   + +V+++      AH L V S+G V++WG    G+LG G T
Sbjct: 179 QLGEGTTSNRPEPVQVQGLSGVVAVA---AGSAHSLAVRSDGTVWAWGANASGQLGDGTT 235

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
             +  P  + G L G  V  V+AGH HS AV  DG ++ WG  D  +LG G ++    P 
Sbjct: 236 TDRLVPVQVQG-LSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMR-LLVPA 291

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  LS V AV+ G++H+L +  DG TVW++GS N G+LG       TT +++       
Sbjct: 292 QVQGLSAVVAVAAGDTHSLAVGSDG-TVWAVGSNNNGQLGD----GTTTYRLVPVPVLSG 346

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSS--------- 471
           V  V A    S+A+  DG V+ WG      LG  +++     PV V+GLS          
Sbjct: 347 VVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRL-VPVQVSGLSEVVSVVAGGY 405

Query: 472 -------------------HQIVD--------------------VSIGDSHVLALSQYNE 492
                               Q+ D                    V+ G SH LAL     
Sbjct: 406 HSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGAVASGSSHSLALRSDGT 465

Query: 493 VYAWGSNTMGQCG 505
           V+ WG N+ GQ G
Sbjct: 466 VWTWGYNSFGQLG 478



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/272 (36%), Positives = 134/272 (49%), Gaps = 18/272 (6%)

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSH 333
               +H L + S+G V++WG    G+LG G T     P  + + GL    V  V AG SH
Sbjct: 2   AAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGL--SEVVAVDAGSSH 59

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           S AV  DG ++ WG    G+LG     SR TP  V  LS V  V+ G SH L L  DG T
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETTISRSTPVQVLGLSGVLFVAAGSSHVLALRYDG-T 118

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           VW+ GS + G+ G   T     P   + L    V  V AG + S+A+  DG  + WG   
Sbjct: 119 VWAWGSNSSGQRGDGTTNNRALPVQAQGLSG--VMAVAAGDNHSLAVRSDGSAWAWGSNA 176

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
              LG  ++S +   PV V GLS   +V V+ G +H LA+     V+AWG+N  GQ G  
Sbjct: 177 SGQLGEGTTS-NRPEPVQVQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDG 233

Query: 508 NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             ++ +  P +V GL  V    + AG   S+A
Sbjct: 234 TTTDRL-VPVQVQGLSGVVA--VAAGHHHSLA 262



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 116/220 (52%), Gaps = 15/220 (6%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR--HTPTLVTELSDVGAVSCGESHT 384
           ++AG SHS A+  DG ++ WG    G+LG G         P  V  LS+V AV  G SH+
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHS 60

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           L +  DG TVW+ GS   G+LG E T   +TP  ++ L    V  V AG+S  +AL +DG
Sbjct: 61  LAVRSDG-TVWAWGSNASGQLGDETTISRSTP--VQVLGLSGVLFVAAGSSHVLALRYDG 117

Query: 445 LVFWWG---LGLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            V+ WG    G R    + +   PV   GLS   ++ V+ GD+H LA+      +AWGSN
Sbjct: 118 TVWAWGSNSSGQRGDGTTNNRALPVQAQGLSG--VMAVAAGDNHSLAVRSDGSAWAWGSN 175

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             GQ G+   SN   +P +V GL  V    + AGS  S+A
Sbjct: 176 ASGQLGEGTTSNR-PEPVQVQGLSGVVA--VAAGSAHSLA 212



 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 122/241 (50%), Gaps = 25/241 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSR-----PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           V+ WG N  +Q+     GK S       ++Q L S +  + AG   +  + S G +   G
Sbjct: 269 VWGWGRNDSNQL-----GKGSMRLLVPAQVQGL-SAVVAVAAGDTHSLAVGSDGTVWAVG 322

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
               G LG   TT + +P  VP+ + +VS++    ++ H L V S+G V++WG    G+L
Sbjct: 323 SNNNGQLGDGTTTYRLVP--VPVLSGVVSVA---ANDYHSLAVRSDGTVWAWGYNSTGQL 377

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G T ++  P  + G L    V  V AG  HS AV  DG  + WG   +G+LG G    
Sbjct: 378 GDGTTTTRLVPVQVSG-L--SEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTY 434

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
              P  V +LS VGAV+ G SH+L L  DG TVW+ G  + G+LG+     + T  VI +
Sbjct: 435 LPVPVRVQQLSGVGAVASGSSHSLALRSDG-TVWTWGYNSFGQLGNGP--PLNTATVIRS 491

Query: 422 L 422
           L
Sbjct: 492 L 492


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 14/263 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +      P+R+ + +    +S+S  S  HV+ VTS+GEVYSWG   + +LG+G+
Sbjct: 51  GCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGS 110

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P  +   L  K+   V+ G  HS  +T DG +Y WG  + G++G G   ++  P
Sbjct: 111 TNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIP 170

Query: 366 TLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             VT       V  ++CG+  ++ +  +G  V++ G    G+LG   +G   TP  I AL
Sbjct: 171 RKVTSCLQNKTVIGIACGQMSSMAVVDNGE-VYAWGYNGNGQLGLGSSGNQPTPCRIAAL 229

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
           +  RV +V  G + ++ALT +G+++ WG      LG  + S   + PV V  +   +IV+
Sbjct: 230 QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSY-PVQVI-VDKERIVE 287

Query: 477 V-SIGDSHV-LALSQYNEVYAWG 497
           + +   SH   A SQ  +VY WG
Sbjct: 288 IAACHSSHTSAAKSQSGQVYMWG 310



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           VL +T   EV+  G    G LG G+  S   P+ I   L GKR+  +S G   H   VT 
Sbjct: 33  VLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRI-DMLSGKRIVSLSYGSGPHVVIVTS 91

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TELSDVGAVS--CGESHTLVLSQDGHTVWS 396
           DG +Y+WG   + +LG+G      +P  V T L +  A+S  CG  H++VL+ DG  V++
Sbjct: 92  DGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGE-VYA 150

Query: 397 MGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T     P KV   L+   V  +  G   S+A+  +G V+ WG     
Sbjct: 151 WGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNG 210

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL SS  +  TP  +  L   ++  V  G +H LAL+    +YAWG+N+ GQ G  N 
Sbjct: 211 QLGLGSSG-NQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNK 269

Query: 510 SN 511
           SN
Sbjct: 270 SN 271



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 11/228 (4%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAGQFCTFLLDSTGG 239
           I  +  +VY+WG N + Q+ +    +   P   S   +      +  G   + +L   G 
Sbjct: 88  IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGE 147

Query: 240 LLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +  +G    G +G  +T  QP+P++V       ++    C +   + V   GEVY+WG  
Sbjct: 148 VYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYN 207

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            +G+LG G++ +Q  P  I   L G RV QV  G++H+ A+T++G++Y WG   +G+LG 
Sbjct: 208 GNGQLGLGSSGNQPTPCRI-AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGT 266

Query: 357 GDLKSRHTP--TLVTELSDVGAVSCGESHT-LVLSQDGHT-VWSMGSG 400
           G+  ++  P   +V +   V   +C  SHT    SQ G   +W    G
Sbjct: 267 GNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCRG 314


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 136/287 (47%), Gaps = 25/287 (8%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            +Y+WG   + Q+   V    + P R++      I  I  G + T +L S G L  +G   
Sbjct: 1269 IYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNE 1328

Query: 246  -GWLGLANTTIQ-PLPKRV---PLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEH 298
             G LGL +     P+P RV    +  A     V+   C  +H +  TS G+VYS+G    
Sbjct: 1329 HGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAK 1388

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
            G+LGHG+T S R PKLI  GL GK + +++ G  H+   T+   +Y WG+G+H  LG G 
Sbjct: 1389 GQLGHGSTESCRYPKLIQ-GLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGS 1447

Query: 359  LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQ------DGHTVWSMGSGNLGKLG---- 406
             K+   P LV    +  V  V CG  HT  L+Q       G  V+  GS   GKLG    
Sbjct: 1448 NKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGD 1507

Query: 407  -HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
                +     P +I ++    V  + +G  F+  +T +G ++ WG G
Sbjct: 1508 PRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAG 1554



 Score =  110 bits (275), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 158/350 (45%), Gaps = 36/350 (10%)

Query: 189  KVYTWGCNLHHQI---LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
            +++TWG N   Q+   L   + + +  R++SL    I  +  G   T ++D +  +  +G
Sbjct: 1214 ELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWG 1273

Query: 245  KG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             G    LG   +T   LPKR+  E A   +S       H L + S G+++++G  EHG+L
Sbjct: 1274 NGKYGQLGHGVSTPHNLPKRIE-EFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQL 1332

Query: 302  GHGNTLSQRRP-------KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G  N L    P         I       RVT +  GHSHS   T  G +Y++G    G+L
Sbjct: 1333 GL-NDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQL 1391

Query: 355  GHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
            GHG  +S   P L+  L   ++  ++CG  HT+V + D  +V+  G G    LG      
Sbjct: 1392 GHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTT-DLDSVYCWGQGEHMCLGTGSNKN 1450

Query: 413  VTTPKVIEALRKFRVRKVCAGTSFSVALTW-------DGLVFWWG------LGL----RS 455
               PK++E     RV +V  G   +  LT         G V+  G      LG+    RS
Sbjct: 1451 ELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRS 1510

Query: 456  SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             S+    P ++  ++S  +VD++ G      ++    +Y WG+ T GQ G
Sbjct: 1511 PSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQIG 1560



 Score =  104 bits (260), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 31/326 (9%)

Query: 249  GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            GLA    Q  P RV        + +S   E H + +     +YSWG G++G+LGHG +  
Sbjct: 1229 GLAAGKHQSTPMRVESLKQTPIMMMSLGGE-HTVVIDRSFHIYSWGNGKYGQLGHGVSTP 1287

Query: 309  QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTL 367
               PK I     G++++ ++ G+ H+  +   G L+ +G  +HG+LG  DLK     PT 
Sbjct: 1288 HNLPKRIE-EFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTR 1346

Query: 368  VT--------ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
            V         + + V  + CG SH+++ +  G  V+S G+   G+LGH  T     PK+I
Sbjct: 1347 VNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGD-VYSFGANAKGQLGHGSTESCRYPKLI 1405

Query: 420  EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQI 474
            + L+   ++++  G   +V  T    V+ WG G        S+ +   P LV    + ++
Sbjct: 1406 QGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRV 1465

Query: 475  VDVSIGDSHVLALSQ-------YNEVYAWGSNTMGQ--CGQDNFSNPVDQ--PSKVVGLE 523
              V  G  H   L+Q          VY  GS+  G+   G D  S  +D+  P+ +  + 
Sbjct: 1466 ERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSIN 1525

Query: 524  DVCVRQICAGSLFSIAYTVPPSNSAL 549
               V  + +G+ F+   T   SN AL
Sbjct: 1526 SANVVDLASGAEFNALIT---SNGAL 1548



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 108/236 (45%), Gaps = 18/236 (7%)

Query: 322  KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVTELSD--VGAV 377
            K    VS G  H+A +T DG L+TWG    G+LGHG    +H  TP  V  L    +  +
Sbjct: 1194 KHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMM 1253

Query: 378  SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
            S G  HT+V+ +  H ++S G+G  G+LGH  +     PK IE     ++  +  G   +
Sbjct: 1254 SLGGEHTVVIDRSFH-IYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHT 1312

Query: 438  VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH------QIVDVSIGDSHVL 485
            + L   G +F +G      LGL         P  V     H      ++  +  G SH +
Sbjct: 1313 LVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSV 1372

Query: 486  ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              + + +VY++G+N  GQ G  + +     P  + GL+   +++I  G   ++  T
Sbjct: 1373 LRTSHGDVYSFGANAKGQLGHGS-TESCRYPKLIQGLKGKNIKRITCGPYHTVVTT 1427



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)

Query: 183  ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLP-SNIRHIEAGQFCTFLLDSTGGL 240
            +  +H  VY++G N   Q+       C  P+L Q L   NI+ I  G + T +      +
Sbjct: 1373 LRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSV 1432

Query: 241  LVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVT-------SEG 288
              +G+G    LG  +   + +PK V L    V+  V +  C   H  T+T       + G
Sbjct: 1433 YCWGQGEHMCLGTGSNKNELVPKLVEL---FVNKRVERVVCGLYHTATLTQPMGDSNTGG 1489

Query: 289  EVYSWGVGEHGKLGHGNTLSQRRPKL------IMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
             VY  G  EHGKLG G     R P L      I+  +    V  +++G   +A +T +G 
Sbjct: 1490 NVYICGSSEHGKLGIGG--DPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGA 1547

Query: 343  LYTWGEGDHGRLGHGDLKSRHTPTLVT 369
            LY WG G HG++G+G  +    PT V+
Sbjct: 1548 LYMWGAGTHGQIGNGKNQDTWIPTRVS 1574



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%)

Query: 358  DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGK-VTT 415
            DL     P L        +VSCG  H  V++ DG  +++ G+   G+LGH    GK  +T
Sbjct: 1180 DLLVHPMPALRFNEKHAKSVSCGWEHAAVITVDGE-LFTWGNNTSGQLGHGLAAGKHQST 1238

Query: 416  PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTGLS 470
            P  +E+L++  +  +  G   +V +     ++ WG G         S   + P  +   +
Sbjct: 1239 PMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFA 1298

Query: 471  SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              +I  ++ G  H L L    +++A+GSN  GQ G ++  + +  P++V
Sbjct: 1299 GQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRV 1347


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  120 bits (301), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 14/263 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +      P+R+ + +    +S+S  S  HV+ VTS+GEVYSWG   + +LG+G+
Sbjct: 51  GCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGS 110

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P  +   L  K+   V+ G  HS  +T DG +Y WG  + G++G G   ++  P
Sbjct: 111 TNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIP 170

Query: 366 TLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             VT       V  ++CG+  ++ +  +G  V++ G    G+LG   +G   TP  I AL
Sbjct: 171 RKVTSCLQNKTVIGIACGQMSSMAVVDNGE-VYAWGYNGNGQLGLGSSGNQPTPCRIAAL 229

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
           +  RV +V  G + ++ALT +G+++ WG      LG  + S   + PV V  +   +IV+
Sbjct: 230 QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSY-PVQVI-VDKERIVE 287

Query: 477 V-SIGDSHV-LALSQYNEVYAWG 497
           + +   SH   A SQ  +VY WG
Sbjct: 288 IAACHSSHTSAAKSQSGQVYMWG 310



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           VL +T   EV+  G    G LG G+  S   P+ I   L GKR+  +S G   H   VT 
Sbjct: 33  VLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI-DMLSGKRIVSLSYGSGPHVVIVTS 91

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TELSDVGA--VSCGESHTLVLSQDGHTVWS 396
           DG +Y+WG   + +LG+G      +P  V T L +  A  V+CG  H++VL+ DG  V++
Sbjct: 92  DGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGE-VYA 150

Query: 397 MGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T     P KV   L+   V  +  G   S+A+  +G V+ WG     
Sbjct: 151 WGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNG 210

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL SS  +  TP  +  L   ++  V  G +H LAL+    +YAWG+N+ GQ G  N 
Sbjct: 211 QLGLGSSG-NQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNK 269

Query: 510 SN 511
           SN
Sbjct: 270 SN 271



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 15/260 (5%)

Query: 155 GDRKSSNSNTDIDSTSTPK---LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCS 210
           GD +S      ID  S  +   L+Y  G    I  +  +VY+WG N + Q+ +    +  
Sbjct: 56  GDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQAL 115

Query: 211 RPRLQS---LPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPL 264
            P   S   +      +  G   + +L   G +  +G    G +G  +T  QP+P++V  
Sbjct: 116 SPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTS 175

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
                ++    C +   + V   GEVY+WG   +G+LG G++ +Q  P  I   L G RV
Sbjct: 176 CLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRV 234

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP--TLVTELSDVGAVSCGES 382
            QV  G++H+ A+T++G++Y WG   +G+LG G+  ++  P   +V +   V   +C  S
Sbjct: 235 EQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSS 294

Query: 383 HT-LVLSQDGHT-VWSMGSG 400
           HT    SQ G   +W    G
Sbjct: 295 HTSAAKSQSGQVYMWGQCRG 314


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  120 bits (300), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 150/317 (47%), Gaps = 15/317 (4%)

Query: 236 STGGLLVYGKGWLGLANTTIQPLPKRVPLEAAI---VSLSVSKCSEAHVLTVTSEGEVYS 292
           ++  +L +G  + G          + VP+   +     ++ +   +AH L VTS G V +
Sbjct: 60  ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLA 119

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG    G+LG G T+++  P  +     G  VT V+AG +HS A+T  G ++ WG+   G
Sbjct: 120 WGRNAVGQLGDGTTINRSTPVDVRLPP-GTTVTAVAAGFNHSLALTSAGTVFAWGDNSTG 178

Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           +LG G   +R TP  V+  S   + AV+ G  H+L L+  G TV++ G  + G+LG    
Sbjct: 179 QLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAG-TVFAWGDNSTGQLGDGTR 237

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPV 464
              +TP V+       V  +  G S S+A+T  G    WG      LG   S+I+    V
Sbjct: 238 TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLG-DGSNINRDASV 296

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
            V       +  V+ G +H LAL+    V +WGSN  GQ G D  +   + P  V     
Sbjct: 297 HVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLG-DGTARDRNTPGSVSLPPG 355

Query: 525 VCVRQICAGSLFSIAYT 541
           V +  + AG LF +A T
Sbjct: 356 VTITAVAAGDLFGLALT 372



 Score =  106 bits (265), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 152/340 (44%), Gaps = 26/340 (7%)

Query: 184 SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP------SNIRHIEAGQFCTFLLDST 237
           +VA   V  WG N + Q+ D   G  +  R   +P      + +     G   +  + S 
Sbjct: 58  TVASDAVLAWGDNYYGQLGD---GTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSA 114

Query: 238 GGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           G +L +G+   G LG   T  +  P  V L       +V+     H L +TS G V++WG
Sbjct: 115 GTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVA-AGFNHSLALTSAGTVFAWG 173

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
               G+LG G T + R   + +    G  +T V+AG  HS A+T  G ++ WG+   G+L
Sbjct: 174 DNSTGQLGDG-TRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQL 232

Query: 355 GHGDLKSRHTPTLV--TELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTG 411
           G G   +R TP +V     + V A++ G SH+L ++  G+   W  G+  +G+LG     
Sbjct: 233 GDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAW--GNNFVGQLGDGSNI 290

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
                  +       V  V  G + S+ALT  G V  WG      LG   ++   +TP  
Sbjct: 291 NRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLG-DGTARDRNTPGS 349

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           V+      I  V+ GD   LAL+    V AWG N +GQ G
Sbjct: 350 VSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLG 389



 Score =  104 bits (260), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 81/232 (34%), Positives = 115/232 (49%), Gaps = 12/232 (5%)

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
           T  +   V +WG   +G+LG G T + R   + +G   G  VT  + G +HS AVT  G 
Sbjct: 57  TTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGT 116

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +  WG    G+LG G   +R TP  V     + V AV+ G +H+L L+  G TV++ G  
Sbjct: 117 VLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAG-TVFAWGDN 175

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
           + G+LG       +TP  +       +  V AG   S+ALT  G VF WG      LG  
Sbjct: 176 STGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLG-D 234

Query: 455 SSSISFHTPVLVTGLSSHQIVD-VSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +  +  TPV+V GL    IV  ++ G SH LA++      AWG+N +GQ G
Sbjct: 235 GTRTNRSTPVVV-GLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLG 285



 Score =  103 bits (256), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 111/360 (30%), Positives = 158/360 (43%), Gaps = 23/360 (6%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPK---LTYNIGDTDISVAHSK---VYTWGCNLHHQ 200
            D+    LGD  ++N  T       PK   +T   G    S+A +    V  WG N   Q
Sbjct: 68  GDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQ 127

Query: 201 ILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           + D      S P    LP  + +  + AG   +  L S G +  +G    G LG    T 
Sbjct: 128 LGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTN 187

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           +  P  V   +  V  +V+     H L +TS G V++WG    G+LG G T + R   ++
Sbjct: 188 RSTPVAVSFPSGTVITAVA-AGGMHSLALTSAGTVFAWGDNSTGQLGDG-TRTNRSTPVV 245

Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV--TELSD 373
           +G   G  VT ++ G SHS AVT  G    WG    G+LG G   +R     V     + 
Sbjct: 246 VGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTT 305

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V AV+ G +H+L L+  G TV S GS N G+LG        TP  +       +  V AG
Sbjct: 306 VTAVAGGLTHSLALTSVG-TVLSWGSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAG 364

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             F +ALT  G V  WG      LG  ++++   TPV  +  ++  I  ++ G  H LAL
Sbjct: 365 DLFGLALTSAGTVLAWGGNIVGQLGDGTTTVR-RTPVAASLPTATTITAIATGSGHSLAL 423



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 92/290 (31%), Positives = 129/290 (44%), Gaps = 42/290 (14%)

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLY--GKRVTQVSAGHSHSA---------------A 336
           GVG+    G G     RR   ++ G +     VT V AG   SA                
Sbjct: 3   GVGQRPGRGVG----ARRAARVIAGWFCLAVVVTAVQAGGVSSAIAQHTSVAQHRPSPTT 58

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHT---PTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           V  D +L  WG+  +G+LG G   +  T   P  + + ++V A + G++H+L ++  G T
Sbjct: 59  VASDAVL-AWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAG-T 116

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V + G   +G+LG   T   +TP  +       V  V AG + S+ALT  G VF WG   
Sbjct: 117 VLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNS 176

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-- 505
              LG   +  +  TPV V+  S   I  V+ G  H LAL+    V+AWG N+ GQ G  
Sbjct: 177 TGQLG-DGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDG 235

Query: 506 -QDNFSNPVDQPSKVVGLE-DVCVRQICAGSLFSIAYTVPPSNSALSSAF 553
            + N S PV     VVGL     V  I  G   S+A T   +  A  + F
Sbjct: 236 TRTNRSTPV-----VVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNF 280


>gi|111220790|ref|YP_711584.1| hypothetical protein FRAAL1334 [Frankia alni ACN14a]
 gi|111148322|emb|CAJ59994.1| hypothetical protein; putative signal peptide [Frankia alni ACN14a]
          Length = 408

 Score =  120 bits (300), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 26/348 (7%)

Query: 191 YTWGCNLHHQILDEVRGKCSRP-RLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           ++WG N   Q+ +      + P R+  L   +++  + AG++  + +   G    +G   
Sbjct: 49  WSWGYNGLGQLGNGTITNSAVPVRVSGLTGLTDVVGVAAGRYAAYAVRRDGTAWSWGYNA 108

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG    T   +P RV     +V+L+       +   +  +G V++WG   +G+LG+G
Sbjct: 109 YGQLGNGRITNSTVPVRVSGLTRVVALA---GGAVNGYALRQDGTVWAWGYNNYGQLGNG 165

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
              + R P  ++G     RV  ++ G + + AV +DG ++ WG+ D G+LG+G   +   
Sbjct: 166 TITNSRVPVRVLGL---SRVVAIAGGGTTAYAVRQDGTVWAWGDNDEGQLGNGTTANSPF 222

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  VT LS V A++ G+     L +DG TVW+ G+ + G+LG+  T   T P  I  L  
Sbjct: 223 PVRVTGLSAVIAIAGGQETGYALRRDG-TVWAWGANDEGQLGNGTTVSSTVPVAIRNLTG 281

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSH-QIV 475
                  +  +   AL  DG  + WGL        G   +S+    PV V+G +    + 
Sbjct: 282 VTAIAASSEGNSGYALRGDGTAWAWGLNNTGQLGNGTDDTSL---VPVQVSGSTGLVGVT 338

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGL 522
            +S G     AL +   V+AWGSN  GQ G    +     +P +V G+
Sbjct: 339 AISAGSFSGYALRRDGTVWAWGSNFFGQLGNGTTTPAFSLRPVQVSGI 386



 Score =  110 bits (275), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 77/231 (33%), Positives = 118/231 (51%), Gaps = 14/231 (6%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           L V   G  +SWG    G+LG+G   +   P  + G      V  V+AG   + AV  DG
Sbjct: 40  LAVAGSGTEWSWGYNGLGQLGNGTITNSAVPVRVSGLTGLTDVVGVAAGRYAAYAVRRDG 99

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
             ++WG   +G+LG+G + +   P  V+ L+ V A++ G  +   L QDG TVW+ G  N
Sbjct: 100 TAWSWGYNAYGQLGNGRITNSTVPVRVSGLTRVVALAGGAVNGYALRQDG-TVWAWGYNN 158

Query: 402 LGKLGHEDTGKVTTPKV-IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
            G+LG+   G +T  +V +  L   RV  +  G + + A+  DG V+ WG      LG  
Sbjct: 159 YGQLGN---GTITNSRVPVRVLGLSRVVAIAGGGTTAYAVRQDGTVWAWGDNDEGQLG-N 214

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            ++ +   PV VTGLS+  ++ ++ G     AL +   V+AWG+N  GQ G
Sbjct: 215 GTTANSPFPVRVTGLSA--VIAIAGGQETGYALRRDGTVWAWGANDEGQLG 263



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 24/260 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           V+ WG N + Q+ +        P R+  L S +  I  G    + +   G +  +G   +
Sbjct: 151 VWAWGYNNYGQLGNGTITNSRVPVRVLGL-SRVVAIAGGGTTAYAVRQDGTVWAWGDNDE 209

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   T   P P RV   +A+++++  + +      +  +G V++WG  + G+LG+G 
Sbjct: 210 GQLGNGTTANSPFPVRVTGLSAVIAIAGGQETG---YALRRDGTVWAWGANDEGQLGNGT 266

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T+S   P  I   L G      S+  +   A+  DG  + WG  + G+LG+G   +   P
Sbjct: 267 TVSSTVPVAIRN-LTGVTAIAASSEGNSGYALRGDGTAWAWGLNNTGQLGNGTDDTSLVP 325

Query: 366 TLV---TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             V   T L  V A+S G      L +DG TVW+ GS   G+LG+      TTP    +L
Sbjct: 326 VQVSGSTGLVGVTAISAGSFSGYALRRDG-TVWAWGSNFFGQLGN----GTTTPAF--SL 378

Query: 423 RKFRVRKVC-----AGTSFS 437
           R  +V  +      AG  FS
Sbjct: 379 RPVQVSGIARADAIAGGGFS 398



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 66/199 (33%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV---TELSDVGAVSCGESHTLVLSQDGH 392
           AV   G  ++WG    G+LG+G + +   P  V   T L+DV  V+ G      + +DG 
Sbjct: 41  AVAGSGTEWSWGYNGLGQLGNGTITNSAVPVRVSGLTGLTDVVGVAAGRYAAYAVRRDG- 99

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           T WS G    G+LG+      T P  +  L   RV  +  G     AL  DG V+ WG  
Sbjct: 100 TAWSWGYNAYGQLGNGRITNSTVPVRVSGLT--RVVALAGGAVNGYALRQDGTVWAWGYN 157

Query: 453 ----LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
               L + +I+    PV V GLS  ++V ++ G +   A+ Q   V+AWG N  GQ G  
Sbjct: 158 NYGQLGNGTITNSRVPVRVLGLS--RVVAIAGGGTTAYAVRQDGTVWAWGDNDEGQLGNG 215

Query: 508 NFSN-PVDQPSKVVGLEDV 525
             +N P   P +V GL  V
Sbjct: 216 TTANSPF--PVRVTGLSAV 232



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 14/207 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N   Q+ +        P   +  S +  I  GQ   + L   G +  +G   +G
Sbjct: 201 VWAWGDNDEGQLGNGTTANSPFPVRVTGLSAVIAIAGGQETGYALRRDGTVWAWGANDEG 260

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV-LTVTSEGEVYSWGVGEHGKLGHGN 305
            LG   T    +P  +     + +++ S  SE +    +  +G  ++WG+   G+LG+G 
Sbjct: 261 QLGNGTTVSSTVPVAIRNLTGVTAIAAS--SEGNSGYALRGDGTAWAWGLNNTGQLGNGT 318

Query: 306 TLSQRRPKLIMG--GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
             +   P  + G  GL G  VT +SAG     A+  DG ++ WG    G+LG+G      
Sbjct: 319 DDTSLVPVQVSGSTGLVG--VTAISAGSFSGYALRRDGTVWAWGSNFFGQLGNGTTTPAF 376

Query: 364 T--PTLVTELSDVGAVSCG--ESHTLV 386
           +  P  V+ ++   A++ G    +TLV
Sbjct: 377 SLRPVQVSGIARADAIAGGGFSGYTLV 403


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  120 bits (300), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 30/338 (8%)

Query: 262 VPLEAA-IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
           V L+A  IV++S   C +AH L +  +G+VY+WG+   G+LG   T    R    +  L 
Sbjct: 28  VALDAQNIVAVS---CGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLS 84

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVG--AV 377
             ++ QVS G+ HS A+++   +++WG+  +G+LG G + K + +P L+  L  +    +
Sbjct: 85  DIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQI 144

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           + G +H+ VL+  G  ++  G    G+LG  D      P ++++LR  ++  +C G   +
Sbjct: 145 AAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 203

Query: 438 VALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLAL-SQYN 491
            ALT +G VF +G G    L  +S S    P  V  L    +  V+ G  H  A      
Sbjct: 204 AALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSG 263

Query: 492 EVYAWGSNTMGQCGQDNFSN------------PVDQ--PSKVVGLEDVCVRQICAGSLFS 537
            +Y++G    GQ G  + SN            P  +  PS + G +  CV++I +G   S
Sbjct: 264 RIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQDPSNIDGEQYYCVKRIFSGGDQS 323

Query: 538 IAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
            ++   P N   S  F   C D     +T+    ++++
Sbjct: 324 FSHYCSPQNLGPSDDFR--CPDPSKQIWTVNEALIQRW 359



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 128/253 (50%), Gaps = 16/253 (6%)

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPT 366
           SQ R +++   L  + +  VS G +H+ A+ + G +Y WG    G+LG  G  +    P 
Sbjct: 21  SQEREQVV--ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPR 78

Query: 367 LVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALR 423
            +  LSD+    VSCG  H+L LS+ G  V+S G    G+LG   +  K T+P++I++L 
Sbjct: 79  NIKSLSDIQIVQVSCGYYHSLALSK-GSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLL 137

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
                ++ AG + S  LT  G +F WG      LGL   +  +  P L+  L S +IV +
Sbjct: 138 GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQKIVYI 196

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
             G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  G   +
Sbjct: 197 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVACGRQHT 255

Query: 538 IAYTVPPSNSALS 550
            A+ VP S    S
Sbjct: 256 SAF-VPSSGRIYS 267



 Score = 87.0 bits (214), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 52  GQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWG 111

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL      Q  P+ +     I  + ++    AH   +T  G ++ WG  + G+
Sbjct: 112 QNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIA-AGGAHSFVLTLSGAIFGWGRNKFGQ 170

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 171 LGLNDENDRYVPNL-LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 229

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  V+CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 230 HEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 289

Query: 419 IEA 421
           ++ 
Sbjct: 290 VKG 292



 Score = 48.9 bits (115), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           ++ WG N   Q+ L++   +     L+SL S  I +I  G+  T  L   GG+  +G G 
Sbjct: 160 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 219

Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
            G    N+T   +  R   E     ++   C   H    V S G +YS+G+G +G+LG G
Sbjct: 220 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 279

Query: 305 NTLSQRRPKLIMGGLY 320
           +T +++ P  + G  +
Sbjct: 280 STSNRKSPFTVKGNWF 295


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  120 bits (300), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 156/334 (46%), Gaps = 21/334 (6%)

Query: 246 GWLGLANTTIQPLP-KRVP--LEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           GWLG+A       P +R P  LEA   + L  +   E H L + S   VYS G    G+L
Sbjct: 152 GWLGIAGMYFTWAPGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQL 211

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +  S +RP+ I   L    +  VS G  HS AV   G ++TWG G  G+LG G+ K 
Sbjct: 212 GQKSPQSTKRPEPIQ-ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKE 270

Query: 362 -RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPK 417
               PT +  L+ +    VSCG  H+L LS+DG  V+S GS   G+LG   +     +P+
Sbjct: 271 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQ-VFSWGSNRQGQLGLGNNLCSQASPQ 329

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGL 469
            +++L    + +V AG + S AL+  G  F WG        L   S+    + P  +  L
Sbjct: 330 KVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGAL 389

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
            +  +V +S G  H   L++  +V+ +G ++  Q  Q +  +    P  + G+    V Q
Sbjct: 390 KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-QHSPRSGRGGPQLIEGIGG-HVSQ 447

Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
           I  GS  +IAY V  +   +S    P C     H
Sbjct: 448 IECGSYHTIAY-VYTTGQVVSLGRGPSCTSNATH 480



 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 21/313 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           ++ +VY+ G N   Q+  +      RP  +Q+L + +I  +  G+  +  +   G +  +
Sbjct: 196 SNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTW 255

Query: 244 G---KGWLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LG+  +  I  +P ++   A I  + VS C   H L ++ +G+V+SWG    G
Sbjct: 256 GAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVS-CGHYHSLALSEDGQVFSWGSNRQG 314

Query: 300 KLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---G 355
           +LG GN L SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L   G
Sbjct: 315 QLGLGNNLCSQASPQKVK-SLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSG 373

Query: 356 HGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           +   +  + P  +  L   +V  +SCG  HT VL++DG  V++ G  +  +L H      
Sbjct: 374 NSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQ-VFTFGGSSSEQLQHSPRSGR 432

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG---- 468
             P++IE +    V ++  G+  ++A  +  G V   G G   +S + H     +     
Sbjct: 433 GGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCL 491

Query: 469 LSSHQIVDVSIGD 481
           LS+  +VD+ + D
Sbjct: 492 LSAKDLVDIEVKD 504


>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
 gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
          Length = 391

 Score =  120 bits (300), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 90/265 (33%), Positives = 129/265 (48%), Gaps = 18/265 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V +WG GE G+LG GN L  +    ++  L    V  V AG  +S A+ EDG L+TWG  
Sbjct: 7   VLAWGAGEDGQLGLGN-LQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWN 65

Query: 350 DHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             G LGH  + K+  TP+ V  L++V  V  + G  H L + ++G T ++ G    G+  
Sbjct: 66  QRGTLGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRT-YAWGGNEYGQCA 124

Query: 407 HEDTGKVTTPKVIEAL--RKFRVRKVC-------AGTSFSVALTWDGLVFWWGLGLRSSS 457
            E   K    K    +  R   + + C       AG + SV LT +G V+ WG       
Sbjct: 125 EEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWGQPWPPGD 184

Query: 458 I-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           I     PV V GL +  +  +++G  H LAL Q+ EV+AWG+N  GQ G  + + P   P
Sbjct: 185 IKQISVPVRVQGLEN--VTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGD-TQPRSSP 241

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
             V GL  + +  I AG   S+A T
Sbjct: 242 VPVKGLTGLVLVDIAAGGWHSMALT 266



 Score =  104 bits (260), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 142/319 (44%), Gaps = 29/319 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLA-NTTIQPLPKRVPLEAAIVSLSVSK 275
           N+  + AG   +  +   G L  +G   +G LG    T  +  P +V    A V +  + 
Sbjct: 39  NVVSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVK-ALANVKIVQAA 97

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK---------LIMGGLYGKRVTQ 326
               H L V  EG  Y+WG  E+G+        +++ K         + +      R+  
Sbjct: 98  IGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLC- 156

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           V+AG +HS  +TE+G ++TWG+        GD+K    P  V  L +V  ++ G  H L 
Sbjct: 157 VAAGGTHSVVLTEEGHVWTWGQ----PWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLA 212

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L Q G  VW+ G+   G+LG  DT   ++P  ++ L    +  + AG   S+ALT DG V
Sbjct: 213 LVQHGE-VWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAV 271

Query: 447 FWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           + WG      LG      S   P  V  L+   +V VS G +H +A +    ++++G   
Sbjct: 272 YGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFGRGD 331

Query: 501 MGQCGQD---NFSNPVDQP 516
            G+ G        +PV+ P
Sbjct: 332 HGRLGYGGAVTTGHPVEVP 350



 Score =  101 bits (252), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 78/246 (31%), Positives = 125/246 (50%), Gaps = 22/246 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQS--------LPSNIRH---IEAGQFCTFLLDST 237
           + Y WG N + Q  +E + K  + + +S        +P        + AG   + +L   
Sbjct: 111 RTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEE 170

Query: 238 GGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           G +  +G+ W       I  +P RV     + ++++      H L +   GEV++WG  E
Sbjct: 171 GHVWTWGQPWPPGDIKQIS-VPVRV---QGLENVTMIAVGAFHNLALVQHGEVWAWGNNE 226

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +G+LG G+T  +  P + + GL G  +  ++AG  HS A+T DG +Y WG G+HGRLG G
Sbjct: 227 YGQLGTGDTQPRSSP-VPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFG 285

Query: 358 DLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           D K S+  P  V  L+   V  VSCG +H++  +  G  ++S G G+ G+LG+   G VT
Sbjct: 286 DDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATISGR-MFSFGRGDHGRLGY--GGAVT 342

Query: 415 TPKVIE 420
           T   +E
Sbjct: 343 TGHPVE 348



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 27/279 (9%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           L +  +G +++WG  + G LGH   T ++  P  +   L   ++ Q + G  H  AV E+
Sbjct: 51  LAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKA-LANVKIVQAAIGGWHCLAVDEE 109

Query: 341 GLLYTWGEGDHGRLGH----------GDLKSRHTP-TLVTELSDVGAVSCGESHTLVLSQ 389
           G  Y WG  ++G+             G+ K  H   T+    +    V+ G +H++VL++
Sbjct: 110 GRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTE 169

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           +GH VW+ G          D  +++ P  ++ L    V  +  G   ++AL   G V+ W
Sbjct: 170 EGH-VWTWGQ----PWPPGDIKQISVPVRVQGLEN--VTMIAVGAFHNLALVQHGEVWAW 222

Query: 450 G------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           G      LG   +     +PV V GL+   +VD++ G  H +AL+    VY WG    G+
Sbjct: 223 GNNEYGQLGTGDTQPR-SSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGR 281

Query: 504 CGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            G  +  +    P KV  L    V Q+  G   S+A T+
Sbjct: 282 LGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHSVAATI 320



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 14/210 (6%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTD--ISVAHSKVYTWGCNLHHQILDEVRGKCSRP 212
           G+ K  + +  I     P+L    G T   +      V+TWG       + ++    S P
Sbjct: 136 GESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWGQPWPPGDIKQI----SVP 191

Query: 213 -RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAI 268
            R+Q L  N+  I  G F    L   G +  +G    G LG  +T  QP    VP++   
Sbjct: 192 VRVQGL-ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDT--QPRSSPVPVKGLT 248

Query: 269 VSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
             + V   +   H + +T +G VY WG GEHG+LG G+  S +     +  L G+ V QV
Sbjct: 249 GLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQV 308

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           S G +HS A T  G ++++G GDHGRLG+G
Sbjct: 309 SCGGTHSVAATISGRMFSFGRGDHGRLGYG 338


>gi|399056402|ref|ZP_10743734.1| Regulator of chromosome condensation (RCC1) repeat containing
           protein [Brevibacillus sp. CF112]
 gi|398046143|gb|EJL38781.1| Regulator of chromosome condensation (RCC1) repeat containing
           protein [Brevibacillus sp. CF112]
          Length = 326

 Score =  120 bits (300), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 88/278 (31%), Positives = 142/278 (51%), Gaps = 27/278 (9%)

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           P+ AA  ++S S     H L +  +G V+SWG   +G+LG G T+ Q  P  + G     
Sbjct: 28  PVSAAENAVS-SAAGSRHSLVLKGDGTVWSWGDNSYGQLGDGTTIQQNVPVQVKGL---T 83

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
            VT+++AG   S A+  DG +++WG   +G+LG G   + +TP     L+DV  ++ G +
Sbjct: 84  NVTRIAAGSDFSLALKADGTVWSWGNNSYGQLGDGKTSASYTPVQAVGLTDVIEIAAGTN 143

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H L L +DG TVW  G+              + P  +  +    V+++ AG+ F++A+  
Sbjct: 144 HGLALKKDG-TVWLWGNFL--------NSSYSKPFQVGGIAD--VKEIAAGSGFNLAVKK 192

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           DG V+ WG      LG  +++ +  +P  +  L++  IV V+ G     AL    +VYAW
Sbjct: 193 DGTVWAWGYNDSGQLGNNNTNNT-SSPTKIGTLAN--IVSVATGYESGYALDVDGKVYAW 249

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           G N  GQ G    +N + QP +V  L D  + +I +GS
Sbjct: 250 GYNGYGQLGDGTSTNRL-QPVQVTDLTD--IEEISSGS 284



 Score = 85.1 bits (209), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 17/275 (6%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQILD 203
            D++   LGD  +   N  +       +T     +D S+A      V++WG N + Q+ D
Sbjct: 58  GDNSYGQLGDGTTIQQNVPVQVKGLTNVTRIAAGSDFSLALKADGTVWSWGNNSYGQLGD 117

Query: 204 EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP 263
                   P      +++  I AG      L   G + ++G       N++    P +V 
Sbjct: 118 GKTSASYTPVQAVGLTDVIEIAAGTNHGLALKKDGTVWLWGN----FLNSSYSK-PFQV- 171

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               I  +          L V  +G V++WG  + G+LG+ NT +   P  I G L    
Sbjct: 172 --GGIADVKEIAAGSGFNLAVKKDGTVWAWGYNDSGQLGNNNTNNTSSPTKI-GTL--AN 226

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE-- 381
           +  V+ G+    A+  DG +Y WG   +G+LG G   +R  P  VT+L+D+  +S G   
Sbjct: 227 IVSVATGYESGYALDVDGKVYAWGYNGYGQLGDGTSTNRLQPVQVTDLTDIEEISSGSYA 286

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            H L   +DG T+++ G GN G++G+  T   + P
Sbjct: 287 YHVLARKKDG-TIYAWGRGNYGQVGNGTTSNSSRP 320



 Score = 65.9 bits (159), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 22/224 (9%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSK---VYTWGCNLHHQILDEVRGKCS 210
           LGD K+S S T + +     +      T+  +A  K   V+ WG  L+           S
Sbjct: 115 LGDGKTSASYTPVQAVGLTDVIEIAAGTNHGLALKKDGTVWLWGNFLNSSY--------S 166

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAA 267
           +P      ++++ I AG      +   G +  +G    G LG  NT     P ++   A 
Sbjct: 167 KPFQVGGIADVKEIAAGSGFNLAVKKDGTVWAWGYNDSGQLGNNNTNNTSSPTKIGTLAN 226

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           IVS++    S  + L V  +G+VY+WG   +G+LG G + ++ +P  +        + ++
Sbjct: 227 IVSVATGYES-GYALDV--DGKVYAWGYNGYGQLGDGTSTNRLQPVQVTDL---TDIEEI 280

Query: 328 SAGHS--HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
           S+G    H  A  +DG +Y WG G++G++G+G   +   P  +T
Sbjct: 281 SSGSYAYHVLARKKDGTIYAWGRGNYGQVGNGTTSNSSRPVKIT 324


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 162/338 (47%), Gaps = 23/338 (6%)

Query: 182  DISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
            D S    +++ WG +   Q   +       P   ++P  I  I  G   T  L++ G +L
Sbjct: 1677 DPSGGDMQLFCWGDSSSGQFGPQA---APSPVSWTVPGVITKICCGDRHTLFLNADGNVL 1733

Query: 242  VYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
              G   +G LG        +  +V    ++V+++   C + H L V++ G V+SWG GE 
Sbjct: 1734 SCGHNSQGQLGRQKKKNGKIIAQVEALGSVVAMA---CGQDHCLAVSASGHVFSWGAGED 1790

Query: 299  GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG- 357
            G+LG   T S       +       + QV+ G+SHS A+T+ G +++WG   HG+LG G 
Sbjct: 1791 GQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGK 1850

Query: 358  DLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGK 412
            ++  +HTP ++  L+ V    ++ G +H+L L+     V+  G+   G+LG    ++ G+
Sbjct: 1851 EVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTL-ADLVYCCGANKCGQLGVNRVDEKGR 1909

Query: 413  VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVT 467
                 ++ ALR   V  +  G S S  LT DG V+ +G G +     S+S +   P LV 
Sbjct: 1910 FNIC-MVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVA 1968

Query: 468  GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            GL       ++ G  H L L    +++A+GS   GQ G
Sbjct: 1969 GLDG-PASQIACGRHHTLVLGSSGQLWAFGSGAKGQTG 2005



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 16/256 (6%)

Query: 224  IEAGQFCTFLLDSTGGLLVYG---KGWLGLANT-TIQPLPKRVPLEAAIVSLSVSKCSEA 279
            +  GQ     + ++G +  +G    G LGL  T +    P +VP+   I  + V+ C  +
Sbjct: 1766 MACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVA-CGNS 1824

Query: 280  HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            H L +T  G+V+SWG+  HG+LG G  +  +   +I+  L G  VTQ++AG +HS  +T 
Sbjct: 1825 HSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTL 1884

Query: 340  DGLLYTWGEGDHGRLG--HGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
              L+Y  G    G+LG    D K R    +V  L    V  +SCGESH+ VL++DG  V+
Sbjct: 1885 ADLVYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDG-KVY 1943

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            + G G+ G+LGH  +     PK++  L     +  C G   ++ L   G ++ +G G + 
Sbjct: 1944 TFGDGSQGQLGHSTSANEVKPKLVAGLDGPASQIAC-GRHHTLVLGSSGQLWAFGSGAKG 2002

Query: 456  SSISFH-----TPVLV 466
             + + H     TP LV
Sbjct: 2003 QTGNGHNDSCLTPTLV 2018



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 139/313 (44%), Gaps = 23/313 (7%)

Query: 235  DSTGG---LLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
            D +GG   L  +G    G       P P    +   I  +    C + H L + ++G V 
Sbjct: 1677 DPSGGDMQLFCWGDSSSGQFGPQAAPSPVSWTVPGVITKIC---CGDRHTLFLNADGNVL 1733

Query: 292  SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
            S G    G+LG      ++  K+I        V  ++ G  H  AV+  G +++WG G+ 
Sbjct: 1734 SCGHNSQGQLGRQK---KKNGKIIAQVEALGSVVAMACGQDHCLAVSASGHVFSWGAGED 1790

Query: 352  GRLGH-GDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG      S H P+ V     +    V+CG SH+L L++ G  V+S G  + G+LG  
Sbjct: 1791 GQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKGG-DVFSWGLNSHGQLGLG 1849

Query: 409  DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-RSSSISF 460
                V  TP +I AL    V ++ AG + S+ LT   LV+  G      LG+ R      
Sbjct: 1850 KEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEKGR 1909

Query: 461  HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
                +V  L    +  +S G+SH   L++  +VY +G  + GQ G    +N V +P  V 
Sbjct: 1910 FNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANEV-KPKLVA 1968

Query: 521  GLEDVCVRQICAG 533
            GL D    QI  G
Sbjct: 1969 GL-DGPASQIACG 1980



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 23/250 (9%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDST 237
            A   V++WG     Q+     G    P     PS +          +  G   +  L   
Sbjct: 1778 ASGHVFSWGAGEDGQL-----GLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKG 1832

Query: 238  GGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYS 292
            G +  +G    G LGL      P+     +  A+  ++V++ +    H L +T    VY 
Sbjct: 1833 GDVFSWGLNSHGQLGLGKEV--PVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYC 1890

Query: 293  WGVGEHGKLGHGNTLSQRRPKLIM-GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
             G  + G+LG      + R  + M   L    V+ +S G SHSA +T+DG +YT+G+G  
Sbjct: 1891 CGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGDGSQ 1950

Query: 352  GRLGHGDLKSRHTPTLVTELSDVGA-VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
            G+LGH    +   P LV  L    + ++CG  HTLVL   G  +W+ GSG  G+ G+   
Sbjct: 1951 GQLGHSTSANEVKPKLVAGLDGPASQIACGRHHTLVLGSSGQ-LWAFGSGAKGQTGNGHN 2009

Query: 411  GKVTTPKVIE 420
                TP +++
Sbjct: 2010 DSCLTPTLVQ 2019



 Score = 44.7 bits (104), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 77/202 (38%), Gaps = 53/202 (26%)

Query: 340  DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            D  L+ WG+   G+ G    ++  +P   T    +  + CG+ HTL L+ DG        
Sbjct: 1682 DMQLFCWGDSSSGQFGP---QAAPSPVSWTVPGVITKICCGDRHTLFLNADG-------- 1730

Query: 400  GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSIS 459
             N+   GH   G++         +K +  K+ A                           
Sbjct: 1731 -NVLSCGHNSQGQL-------GRQKKKNGKIIAQ-------------------------- 1756

Query: 460  FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
                  V  L S  +V ++ G  H LA+S    V++WG+   GQ G     +   +PSKV
Sbjct: 1757 ------VEALGS--VVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKV 1808

Query: 520  VGLEDVCVRQICAGSLFSIAYT 541
                 + + Q+  G+  S+A T
Sbjct: 1809 PIPLPIPIIQVACGNSHSLALT 1830


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  119 bits (299), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 89/289 (30%), Positives = 136/289 (47%), Gaps = 25/289 (8%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           VYTWG N   Q+  D    +   P   ++P  +  + AG + T  +  +G +  +G   K
Sbjct: 58  VYTWGLNDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGK 117

Query: 246 GWLGLANTTI---QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G LGL    +   +P   +   +  +V+++       H L +T+ GEVYSWG   +G+LG
Sbjct: 118 GQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGM---EHSLALTAGGEVYSWGNAANGRLG 174

Query: 303 HGNTLSQRR--------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           HG+   +R         P+L+       RV QVSAG  HSAAV+  G  + WG G   +L
Sbjct: 175 HGSATPRRLFGSSIEFLPRLVRA-FEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQL 233

Query: 355 GHGDLKSRHTPTLVTELS-DVGAVSCGESHTLVLSQDGHTV-WSMGSGNLGKLGHEDTGK 412
           G G  +    PT++  L     AV+CG  H+L L   GH + W      +   GHE   K
Sbjct: 234 GFGSDEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHE---K 290

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL-GLRSSSISF 460
              PK    +      ++ AG   S A+T  G ++ WG  G + +++SF
Sbjct: 291 QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSF 339



 Score =  116 bits (291), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 152/332 (45%), Gaps = 47/332 (14%)

Query: 240 LLVYGKGWLGLANTTIQPLPKRVP--LEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           L  +G G  G    +++   + +P  + A + V L    C  AH   V   G VY+WG+ 
Sbjct: 5   LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLN 64

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYG-----KRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           + G+LGH +  S+        GL G     +RV  +SAG+ H+  V E G ++++G    
Sbjct: 65  DKGQLGHDSEDSEV-------GLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGK 117

Query: 352 GRLGHG-DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
           G+LG G D+     P LV  L D  V AV+ G  H+L L+  G  V+S G+   G+LGH 
Sbjct: 118 GQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGE-VYSWGNAANGRLGH- 175

Query: 409 DTGKVTT-----------PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS 457
             G  T            P+++ A    RV +V AG   S A++  G  F WG G +   
Sbjct: 176 --GSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYG-KFHQ 232

Query: 458 ISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ--DNF 509
           + F +      P ++  L       V+ G  H LAL     V AWG+N  G  GQ  +  
Sbjct: 233 LGFGSDEDLAGPTVLPPLKG-STAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQ 291

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             P  +PSKV G   V   QI AG   S A T
Sbjct: 292 QQP-KRPSKVPG---VSAEQIAAGWKHSAAVT 319



 Score = 98.2 bits (243), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 88/299 (29%), Positives = 130/299 (43%), Gaps = 31/299 (10%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQ-PLPKRVPLEAAIVSLSVSKC 276
           ++ +  G   T  +D +G +  +G   KG LG  +   +  LP  V +   +V+LS    
Sbjct: 39  LKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGY- 97

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
              H L V   G V+S+G    G+LG G  +   R   ++  L   +V  V+AG  HS A
Sbjct: 98  --YHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLA 155

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRH--------TPTLVT--ELSDVGAVSCGESHTLV 386
           +T  G +Y+WG   +GRLGHG    R          P LV   E   V  VS G+ H+  
Sbjct: 156 LTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAA 215

Query: 387 LSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
           +S  G   +W  G G   +LG      +  P V+  L+       C G+  S+AL + G 
Sbjct: 216 VSTAGDAFLW--GYGKFHQLGFGSDEDLAGPTVLPPLKGSTAAVAC-GSLHSLALQYGGH 272

Query: 446 VFWWGLGLRSSSISFHT-------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           V  WG          H        P  V G+S+ QI   + G  H  A++   ++Y WG
Sbjct: 273 VLAWGTNQNGVLGQGHEKQQQPKRPSKVPGVSAEQI---AAGWKHSAAVTGSGKLYTWG 328



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 74/218 (33%), Positives = 107/218 (49%), Gaps = 22/218 (10%)

Query: 342 LLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMG 398
           +L T+G GD GRLGH  +  S   P +V  L  V   AV+CG +HT  +   G TV++ G
Sbjct: 4   VLATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSG-TVYTWG 62

Query: 399 SGNLGKLGH--EDT-----GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWG 450
             + G+LGH  ED+     G+V  P+ + AL       +C G S SV   W  G      
Sbjct: 63  LNDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSV---WSFGCNGKGQ 119

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-- 508
           LGL    +    P LV  L  +++V V+ G  H LAL+   EVY+WG+   G+ G  +  
Sbjct: 120 LGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSAT 179

Query: 509 ----FSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
               F + ++  P  V   E + V Q+ AG + S A +
Sbjct: 180 PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVS 217



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 55/244 (22%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRL-----QSLPSNIRHIEA--------GQFCTF 232
           A  +VY+WG   + ++     G  +  RL     + LP  +R  EA        GQ  + 
Sbjct: 158 AGGEVYSWGNAANGRL---GHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSA 214

Query: 233 LLDSTGGLLVYGKG---WLG------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT 283
            + + G   ++G G    LG      LA  T+ P     PL+ +  +++   C   H L 
Sbjct: 215 AVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLP-----PLKGSTAAVA---CGSLHSLA 266

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           +   G V +WG  ++G LG G+   Q  +RP  + G        Q++AG  HSAAVT  G
Sbjct: 267 LQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVPG----VSAEQIAAGWKHSAAVTGSG 322

Query: 342 LLYTWG--------------EGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTL 385
            LYTWG               G  G+LGHG+     +P  V    L++   V+CG +HT 
Sbjct: 323 KLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTA 382

Query: 386 VLSQ 389
            + +
Sbjct: 383 AIVE 386


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 129/255 (50%), Gaps = 10/255 (3%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGL-YGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           +Y WG   HG+LG G     +    I     Y   V+QV+ G +H+  +T+ G +++ G 
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            D  +LGH   +++       +   +  +SCG +HTL  ++ G  ++  GS + G+LG  
Sbjct: 61  NDLDQLGHKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQ-LFGWGSDSHGQLGFN 119

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT 462
            T +   PK+I++L  F + ++  G + S+ALT +G ++ WG      LGL   S     
Sbjct: 120 GTTQ-PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQ 178

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
           P L+  L    I  ++ G +H  ALS+   +Y WG NT GQ G ++  N +  P+++  L
Sbjct: 179 PTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKL-HPTQLKTL 237

Query: 523 EDVCVRQICAGSLFS 537
             + V+ I  G  FS
Sbjct: 238 RSIRVKYIACGEDFS 252



 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 23/314 (7%)

Query: 190 VYTWGCNLHHQI------LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +Y WG  +H ++       D++             SN+  +  G+  T +L  +G +   
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTF--KYASNVSQVTMGENHTVMLTKSGEVFSC 58

Query: 244 GKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G   L  L +   +  P++V        ++   C   H L     G+++ WG   HG+LG
Sbjct: 59  GNNDLDQLGHKKQRTKPEKVE-GLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              T +Q  PK+I   L    + Q+S G +HS A+T +G LY+WG    G+LG G ++S 
Sbjct: 118 FNGT-TQPLPKIIKS-LATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG-MRSE 174

Query: 363 H--TPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
           +   PTL+  L  +    ++CG +H+  LS+ G  ++  G    G+LG  D      P  
Sbjct: 175 YEKQPTLIKSLLGIPIAFIACGSNHSFALSKSG-AIYGWGKNTYGQLGLNDEENKLHPTQ 233

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQ 473
           ++ LR  RV+ +  G  FS  L+ DG VF  G G+       S+ +   P  +  L    
Sbjct: 234 LKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGST 293

Query: 474 IVDVSIGDSHVLAL 487
           +  VS G  H LAL
Sbjct: 294 VTQVSCGKRHTLAL 307



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 15/207 (7%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTE----LSDVGAVSCGESHTLVLSQDGHTVWSMG 398
           +Y WG   HG LG G ++       +       S+V  V+ GE+HT++L++ G  V+S G
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGE-VFSCG 59

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           + +L +LGH+   + T P+ +E L  +R+ K+  G + ++A    G +F WG      LG
Sbjct: 60  NNDLDQLGHKK--QRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
              ++     P ++  L++  IV +S G +H LAL+   E+Y+WG N  GQ G    S  
Sbjct: 118 FNGTTQPL--PKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY 175

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
             QP+ +  L  + +  I  GS  S A
Sbjct: 176 EKQPTLIKSLLGIPIAFIACGSNHSFA 202



 Score = 44.3 bits (103), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           +Y WG N + Q+ L++   K    +L++L S  +++I  G+  +  L + GG+   G G 
Sbjct: 209 IYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGM 268

Query: 248 ---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSW 293
              LG  +T+ + LP+++ +E    +++   C + H L  V S G VYS+
Sbjct: 269 YGQLGHGSTSNEILPRKI-MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 166/357 (46%), Gaps = 44/357 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           V+ WG N +  +     G  +   + ++P  +  +  G   T +  S+  L V   G   
Sbjct: 317 VWAWGGNSYGAL-----GNDTIETMSTVPVQVPGLSGG--VTVVAASSHALAVRSDGTVW 369

Query: 247 -WLG-----LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            W G     L + T       VP++     ++V+   E H L V S+  V++WG    G+
Sbjct: 370 AWGGNHYGQLGDGTTSERLVAVPVQGLSGVMAVAARQE-HSLAVRSDATVWAWGRNYEGQ 428

Query: 301 LGHGNTLSQRR------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           LG G T  +RR      PKL         V  V+AG  HS AV  DG ++ WG+ ++G++
Sbjct: 429 LGDGTT--RRREVPVPVPKL-------SSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQV 479

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           G G   SR  P  V  L    AV+ GE+H+LVL  DG TVW+ G  + G+LG+  T    
Sbjct: 480 GDGTETSRKAPVRVPNLGGGVAVAAGENHSLVLRSDG-TVWAWGGNHYGQLGNGITSDSP 538

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---GLRSSSISFHTP----VLVT 467
            P  ++ L       V AG  +S+A+  DG V+ WGL   G      +  +P    V V 
Sbjct: 539 VPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVP 596

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
           GLS    V V+ G SH L +     V+AWGSN  GQ G+      V  P +V GL +
Sbjct: 597 GLSGG--VAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSE 651



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 155/336 (46%), Gaps = 32/336 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+  G N+  Q+ D    +   P ++Q L S +  +  G + +  L S G +   G+   
Sbjct: 67  VWAVGENVFGQLGDGTTSERRVPVQVQGL-SGVVAVAVGAYHSLALRSDGTVWAVGRAAC 125

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G  G A+    P P  VP  +  V+++       H L + S+G V++WG    G+LG G
Sbjct: 126 QGGDGTASDCTVPAP--VPGLSGGVAVAAGGL---HSLALRSDGTVWAWGSNFEGQLGDG 180

Query: 305 NT---LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            T   L   R K + G      V  V+AG  HS AV  DG ++TWG   +G LG G   S
Sbjct: 181 TTNVSLVPVRVKKLTG------VVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSS 234

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED-TGKVTTPKVIE 420
           R  P  V  LS   AV+ G  H+L +  DG TVW  G+  +G+LG      +V  P   +
Sbjct: 235 RKVPVQVQGLSGGVAVAGGVYHSLAVRSDG-TVWGWGANGVGQLGDGTPMRRVLVPVQAQ 293

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  V AG S S+A+ +DG V+ WG      LG  +       PV V GLS    
Sbjct: 294 GLSG--VEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSGG-- 349

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           V V    SH LA+     V+AWG N  GQ G    S
Sbjct: 350 VTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTS 385



 Score =  105 bits (261), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 162/347 (46%), Gaps = 32/347 (9%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVY 243
           + V+ WG N   Q+ D      +R R   +P    S++  + AG++ +  +   G +  +
Sbjct: 416 ATVWAWGRNYEGQLGD----GTTRRREVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAW 471

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G +G    T +  P RVP     V+++     E H L + S+G V++WG   +G+
Sbjct: 472 GDNEYGQVGDGTETSRKAPVRVPNLGGGVAVA---AGENHSLVLRSDGTVWAWGGNHYGQ 528

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG+G T     P  + G L G     V+AG  +S AV  DG ++ WG    G+LG G   
Sbjct: 529 LGNGITSDSPVPVQVQG-LSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTAS 585

Query: 361 SRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPK 417
               P  V    LS   AV+ G SH LV+  DG TVW+ GS   G++G      +V  P 
Sbjct: 586 DSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDG-TVWAWGSNYDGQVGEGAPRRRVLMPV 644

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSS 471
            ++ L +     V AG + S+A+  DG V+ WG G  +  +   T      PV   GL+ 
Sbjct: 645 QVQGLSEGM--AVAAGYNHSLAVRSDGSVWAWG-GNTAGVLGDGTTDRRTVPVQAQGLTG 701

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
            + V  + G+SH L L      +A GSN  GQ G    +  V  P++
Sbjct: 702 ARAV--AAGESHSLVLRSDGTGWAMGSNASGQIGDGGPTQQVSTPTR 746



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 129/288 (44%), Gaps = 20/288 (6%)

Query: 242 VYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           V+G+  LG   T+ + +P +V   + +V+++V      H L + S+G V  W VG     
Sbjct: 74  VFGQ--LGDGTTSERRVPVQVQGLSGVVAVAVGAY---HSLALRSDGTV--WAVGRAACQ 126

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G   T S       + GL G     V+AG  HS A+  DG ++ WG    G+LG G    
Sbjct: 127 GGDGTASDCTVPAPVPGLSGG--VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNV 184

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
              P  V +L+ V AV+ GE H+L +  DG TVW+ G    G LG   T     P  ++ 
Sbjct: 185 SLVPVRVKKLTGVVAVAAGEKHSLAVRSDG-TVWTWGFNGYGALGDGTTSSRKVPVQVQG 243

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L       V  G   S+A+  DG V+ WG      LG  +       PV   GLS   + 
Sbjct: 244 LSGGV--AVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSG--VE 299

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            V+ G S  LA+     V+AWG N+ G  G D        P +V GL 
Sbjct: 300 AVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLS 347



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 126/268 (47%), Gaps = 22/268 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H   V  +G V  W VGE+  G+LG G T S+RR  + + GL G  V  V+ G  HS A+
Sbjct: 57  HSWAVRPDGTV--WAVGENVFGQLGDGTT-SERRVPVQVQGLSG--VVAVAVGAYHSLAL 111

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
             DG ++  G     + G G       P  V  LS   AV+ G  H+L L  DG TVW+ 
Sbjct: 112 RSDGTVWAVGRAAC-QGGDGTASDCTVPAPVPGLSGGVAVAAGGLHSLALRSDG-TVWAW 169

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           GS   G+LG   T     P  ++ L    V  V AG   S+A+  DG V+ WG      L
Sbjct: 170 GSNFEGQLGDGTTNVSLVPVRVKKLTG--VVAVAAGEKHSLAVRSDGTVWTWGFNGYGAL 227

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  ++S S   PV V GLS    V V+ G  H LA+     V+ WG+N +GQ G      
Sbjct: 228 GDGTTS-SRKVPVQVQGLSGG--VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMR 284

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            V  P +  GL    V  + AG   S+A
Sbjct: 285 RVLVPVQAQGLSG--VEAVAAGHSLSLA 310



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 101/212 (47%), Gaps = 15/212 (7%)

Query: 319 LYGKRV-TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
           L G R   +++ G +HS AV  DG ++  GE   G+LG G    R  P  V  LS V AV
Sbjct: 42  LGGARARARIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQGLSGVVAV 101

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           + G  H+L L  DG TVW++G     + G       T P  +  L       V AG   S
Sbjct: 102 AVGAYHSLALRSDG-TVWAVGRAAC-QGGDGTASDCTVPAPVPGLSGG--VAVAAGGLHS 157

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL  DG V+ WG      LG  ++++S   PV V  L+   +V V+ G+ H LA+    
Sbjct: 158 LALRSDGTVWAWGSNFEGQLGDGTTNVSL-VPVRVKKLTG--VVAVAAGEKHSLAVRSDG 214

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            V+ WG N  G  G D  ++    P +V GL 
Sbjct: 215 TVWTWGFNGYGALG-DGTTSSRKVPVQVQGLS 245


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  119 bits (299), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 23/267 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V +WG GE G+LG G    +   + +   L    V+ V AG  +S A+  DG L+TWG  
Sbjct: 13  VLAWGSGEDGQLGMGGYEEEDWARGV-AALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71

Query: 350 DHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             G LGH  + K+  +P  V  L+ V  V  + G  H L +   G   ++ G    G+ G
Sbjct: 72  QRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRA-YAWGGNEYGQCG 130

Query: 407 HEDTGKVTTPKVIEALR-----------KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            E   K    +   ALR           K +VR+V AG + SV LT DG V+ WG     
Sbjct: 131 EEAERKEDGTR---ALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPP 187

Query: 456 SSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             I    TPV V GL + ++  +++G  H LAL++   ++AWG+N  GQ G  + + P  
Sbjct: 188 GDIKQISTPVRVQGLENVKV--IAVGAFHNLALTEDGILWAWGNNEYGQLGTGD-TQPRS 244

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
           QP +V GL D+ +  I AG   S A T
Sbjct: 245 QPIRVEGLSDLSLVDIAAGGWHSTALT 271



 Score =  116 bits (290), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 30/296 (10%)

Query: 266 AAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           AA+ +L+VS       + L + ++G +++WG  + G LGH            +  L G  
Sbjct: 39  AALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVS 98

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELS---------D 373
           + Q + G  H  AV + G  Y WG  ++G+ G   + K   T  L  ++           
Sbjct: 99  IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLK 158

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V  V+ G +H++VL+QDGH VW+ G          D  +++TP  ++ L   +V  +  G
Sbjct: 159 VRQVAAGGTHSVVLTQDGH-VWTWGQ----PWPPGDIKQISTPVRVQGLENVKV--IAVG 211

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              ++ALT DG+++ WG      LG   +      P+ V GLS   +VD++ G  H  AL
Sbjct: 212 AFHNLALTEDGILWAWGNNEYGQLGTGDTQPR-SQPIRVEGLSDLSLVDIAAGGWHSTAL 270

Query: 488 SQYNEVYAWGSNTMGQC--GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++  EVYAWG    G+   G D  S+ V Q  +++  ED+   Q+  G   S+A T
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDII--QVSCGGTHSVALT 324



 Score =  113 bits (283), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 21/245 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGK--CSRPRLQSLPS--------NIRHIEAGQFCTFLLDSTG 238
           + Y WG N + Q  +E   K   +R   + +P          +R + AG   + +L   G
Sbjct: 117 RAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDG 176

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +  +G+ W       I   P RV     + ++ V      H L +T +G +++WG  E+
Sbjct: 177 HVWTWGQPWPPGDIKQIST-PVRV---QGLENVKVIAVGAFHNLALTEDGILWAWGNNEY 232

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LG G+T  + +P + + GL    +  ++AG  HS A+T++G +Y WG G+HGRLG GD
Sbjct: 233 GQLGTGDTQPRSQP-IRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGD 291

Query: 359 LKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            KS H      EL    D+  VSCG +H++ L++DG  ++S G G+ G+LG+    KVTT
Sbjct: 292 DKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGR-MFSYGRGDHGRLGYGR--KVTT 348

Query: 416 PKVIE 420
              +E
Sbjct: 349 GHPME 353



 Score =  101 bits (251), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 28/219 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG       + ++    S P R+Q L  N++ I  G F    L   G L  +G    
Sbjct: 178 VWTWGQPWPPGDIKQI----STPVRVQGL-ENVKVIAVGAFHNLALTEDGILWAWGNNEY 232

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG  +T  +  P RV     +  LS+   +    H   +T EGEVY+WG GEHG+LG 
Sbjct: 233 GQLGTGDTQPRSQPIRV---EGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF 289

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+  S       +  L G+ + QVS G +HS A+T DG ++++G GDHGRLG+G   +  
Sbjct: 290 GDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTG 349

Query: 364 TPTLV--------TELSDVGA------VSCGESHTLVLS 388
            P  V        T   D G       V+CG  HTL ++
Sbjct: 350 HPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 157/336 (46%), Gaps = 38/336 (11%)

Query: 148 DDNIKPLGDRKSSNSNTDIDSTSTPK-LTYNIGDTDISV-----------AHSKVYTWGC 195
           D  +     R+ + +  D+ +++ PK L   +G+  ++V           A   VY+WG 
Sbjct: 20  DGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGW 79

Query: 196 N----LHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWL 248
                L H  L  +         +     + ++  G   +  + + G L ++G+   G L
Sbjct: 80  GSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQL 139

Query: 249 GLAN---TTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           GL        +  P + PL   +   SV K  C   H   +T+ G VY WG G+ G+LG 
Sbjct: 140 GLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGI 199

Query: 304 GNT----------LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G+           L   RP L+ G   G++V QV+ G  HSAAVTE G +Y WG+ D+G 
Sbjct: 200 GSAWLKDTDDNGLLGVSRPHLVEG-FNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGM 258

Query: 354 LGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG G    + TP  V    D+ A  VSCG  HT+V+++ G   ++ G G  G+LG  DT 
Sbjct: 259 LGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSG-DCYAFGRGEYGRLGLGDTK 317

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
             T P +++AL+   V +   G S ++ +T DG+ +
Sbjct: 318 SRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAY 353



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 176/404 (43%), Gaps = 61/404 (15%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI------------MGGLYGKRVTQVS 328
           + T  +E  V ++G  + G+LG G   ++RRP L             +GGL G+ +  VS
Sbjct: 3   ISTGATECAVVAFGCNDDGQLGTG---AKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVS 59

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT----ELSDVGAVSCGESHT 384
            G  H+ A+T  G +Y+WG G  G+LGHGDLKS + P  +     E   V  VSCG  H+
Sbjct: 60  CGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHS 119

Query: 385 LVLSQDGHTVWSMGSGNLGKLG--------HEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
             ++ DG T++  G  + G+LG        HE    V  P ++E +    V KV  G + 
Sbjct: 120 AAVTNDG-TLYMWGETHWGQLGLPKEFEAAHESF-PVKCP-LLEGVADESVVKVSCGGTH 176

Query: 437 SVALTWDGLVFWWG------LGLRSSS---------ISFHTPVLVTGLSSHQIVDVSIGD 481
           + ALT  G V+ WG      LG+ S+          +    P LV G +  ++V V+ G 
Sbjct: 177 TAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGA 236

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            H  A+++   VY WG    G  G    S+    P +V   +D+   ++  G   ++   
Sbjct: 237 FHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQ-QTPKRVEFFDDIPALRVSCGGWHTMVVA 295

Query: 542 VPPSNSALSSA-FTPLCVD-----VRPHTFTLIREFLEQYSAC------FETGDYIPFCS 589
                 A     +  L +       RPH    ++      +AC      F T D I + +
Sbjct: 296 KSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVA 355

Query: 590 -KVTHAQFILLLLRLLS--SHLYLALIGARSSSVLGNETAALRH 630
            +  H +  +  ++ LS  + L L  I  R  S  G  + AL H
Sbjct: 356 GRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALTH 399



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 163/350 (46%), Gaps = 42/350 (12%)

Query: 248 LGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           L + + +    PK++   L   IV++S   C   H + +T+ G VYSWG G  G+LGHG+
Sbjct: 33  LAIDDVSASNFPKQLGGLLGEEIVAVS---CGSRHTMALTASGAVYSWGWGSMGQLGHGD 89

Query: 306 TLSQRRP-KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRH 363
             S   P K+      G +V  VS G  HSAAVT DG LY WGE   G+LG   + ++ H
Sbjct: 90  LKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAH 149

Query: 364 TP-----TLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--------HE 408
                   L+  ++D  V  VSCG +HT  L+  G  V+  G G+ G+LG         +
Sbjct: 150 ESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGR-VYVWGRGDSGQLGIGSAWLKDTD 208

Query: 409 DTG--KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
           D G   V+ P ++E     +V +V  G   S A+T  G V+ WG      LG+  +S   
Sbjct: 209 DNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQ- 267

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
            TP  V        + VS G  H + +++  + YA+G    G+ G  + +    +P  V 
Sbjct: 268 QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGD-TKSRTRPHLVK 326

Query: 521 GLEDVCVRQ-ICAGS--LF----SIAYTVP-PSNSALS-SAFTPLCVDVR 561
            L+   V Q  C GS  LF     IAY    P +  L  +   PL V  R
Sbjct: 327 ALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTR 376



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 16/197 (8%)

Query: 210 SRPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPL 264
           SRP L        +  +  G F +  +   G + ++GK   G LG+  T+ Q  PKRV  
Sbjct: 216 SRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEF 275

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
              I +L VS C   H + V   G+ Y++G GE+G+LG G+T S+ RP L+   L G+ V
Sbjct: 276 FDDIPALRVS-CGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKA-LKGQTV 333

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA-----VSC 379
            Q + G SH+  VT DG+ Y  G  DHGRLG  D+K    PT +    D+G      VS 
Sbjct: 334 IQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRL----DLGPIPVRQVSA 389

Query: 380 GESHTLVLSQDGHTVWS 396
           G +H++ L+     ++S
Sbjct: 390 GGAHSMALTHSSRPIFS 406


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 156/338 (46%), Gaps = 29/338 (8%)

Query: 222 RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLP----KRVPLEAAIVSLSVS 274
           + +  G   T L+  +G L  +G    G LG+    +   P    K  P +  +V+    
Sbjct: 39  KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVA---- 94

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            C   H +  T  G +Y++G    G+LG  +  S   P  +      ++   ++AG  HS
Sbjct: 95  -CGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVE--CEPRQYKALAAGADHS 151

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+T+DG LY WG G  G+LG GD+  + TPTL++  + V +V+CG  HT  ++  G  V
Sbjct: 152 VALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKVISVACGYYHTAFVTDVGE-V 210

Query: 395 WSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           ++ G G+ GKLG   D GK   PK +    K   + V  G S +V LT  G V+ +G   
Sbjct: 211 FTFGEGDGGKLGQGTDYGKAVAPKKVNIPEK--AKSVACGGSHTVVLTECGKVYTFGEGG 268

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
              LG ++      TPV +     H++  ++ G++H   +++  ++Y +G     + G D
Sbjct: 269 NGQLGHKNKYFYCETPVWLN--FKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLD 326

Query: 508 N--FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVP 543
           +  +SN    P +        V Q+  G    I    P
Sbjct: 327 HECYSNQY-FPQRSKRFSKFIVTQVSCGGCHMIVLAYP 363



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 12/223 (5%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGA 376
           + G +   V+ G  H+A VTE G L+T+G  D G+LG  ++K    P  V +L    V  
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           V+CG  HT+V ++ G  +++ G+   G+LG ED      P  +E   + + + + AG   
Sbjct: 93  VACGRIHTIVATESG-CLYTFGANGDGQLGVEDIPSSNCPVKVECEPR-QYKALAAGADH 150

Query: 437 SVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           SVALT DG ++ WG G    L    I    TP L++  + ++++ V+ G  H   ++   
Sbjct: 151 SVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLS--TDNKVISVACGYYHTAFVTDVG 208

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           EV+ +G    G+ GQ         P K V + +      C GS
Sbjct: 209 EVFTFGEGDGGKLGQGTDYGKAVAPKK-VNIPEKAKSVACGGS 250



 Score = 41.2 bits (95), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 29/190 (15%)

Query: 165 DIDSTSTPKLTYNIGDTDISVA----HS-------KVYTWGCNLHHQILDEVR-GKCSRP 212
           DID  STP L  +  +  ISVA    H+       +V+T+G     ++      GK   P
Sbjct: 175 DIDDKSTPTL-LSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAP 233

Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQ-PLPKRVPLEAAI 268
           +  ++P   + +  G   T +L   G +  +G+G    LG  N       P  +  +  +
Sbjct: 234 KKVNIPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKV 293

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-----HGNTLSQRRPKLIMGGLYGKR 323
             ++     E H   VT +G++Y++G G H KLG     + N    +R K     +    
Sbjct: 294 TQIAA---GENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSKFI---- 346

Query: 324 VTQVSAGHSH 333
           VTQVS G  H
Sbjct: 347 VTQVSCGGCH 356


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 126/238 (52%), Gaps = 17/238 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDG 341
           +T++G+VY+ G   HG+LGHG+T+ +  PK++    GL    V QV+AG S++ AVT+DG
Sbjct: 223 LTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGL--APVVQVAAGASYTFAVTDDG 280

Query: 342 LLYTWGEGDHGRLGHGD----LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
            +Y++G   +  LGHGD    L+ R   +       V  VS G+ H + L   G+ V++ 
Sbjct: 281 TVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGY-VYTW 339

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL- 453
           G G  G LGH D    T+P++I +L+     +VCA    +  LT +G VF   W G G  
Sbjct: 340 GRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSL 399

Query: 454 ----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
               R SS     P ++  L  H +  +S G  H +A++    V+ +G N   Q GQ+
Sbjct: 400 GFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQE 457



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           + + +  G   T +L + G +   G    G LG  +T  +  PK V L   +  +     
Sbjct: 209 SCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAA 268

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSH 333
             ++   VT +G VYS+G   +  LGHG+   + RP+ I    + +R   V +VSAG  H
Sbjct: 269 GASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQS--FKRRNIHVVRVSAGDEH 326

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH-TLVLSQDG 391
           + A+   G +YTWG G  G LGHGD   + +P L++ L S V    C     T VL+ +G
Sbjct: 327 AVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEG 386

Query: 392 HTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            +V++ G    G LG  D G   KV  P+V+++LR   V ++  G   +VA+T  G+VF 
Sbjct: 387 -SVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFG 445

Query: 449 WG 450
           +G
Sbjct: 446 FG 447



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 137/310 (44%), Gaps = 17/310 (5%)

Query: 246 GWLGLANTTIQPLP-KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G LG    T Q     RVP  +    +++S  S  H   VT  GEV++ G       GHG
Sbjct: 132 GVLGHGPDTTQCAAFSRVPFPSLSRVVNISA-SHNHAAFVTELGEVFTCGDNSSLCCGHG 190

Query: 305 NT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               +  RP  I   L G    QV+ G S +  +T DG +YT G   HG+LGHGD   R 
Sbjct: 191 EVGRTIFRPTEIKA-LKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRA 249

Query: 364 TPTLV---TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           TP +V     L+ V  V+ G S+T  ++ DG TV+S GS     LGH D      P+ I+
Sbjct: 250 TPKIVELFEGLAPVVQVAAGASYTFAVTDDG-TVYSFGSCTNFCLGHGDQHDELRPRAIQ 308

Query: 421 AL--RKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQ 473
           +   R   V +V AG   +VAL   G V+ WG G              +P L++ L S  
Sbjct: 309 SFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQV 368

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQIC 531
            V V         L+    V+A+G    G  G      S+ V +P  +  L D  V QI 
Sbjct: 369 AVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQIS 428

Query: 532 AGSLFSIAYT 541
            G   ++A T
Sbjct: 429 TGLYHTVAVT 438



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 125/264 (47%), Gaps = 33/264 (12%)

Query: 290 VYSWGVGEHGKLGHGNTLSQ-----RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           VYS G    G LGHG   +Q     R P   +      RV  +SA H+H+A VTE G ++
Sbjct: 123 VYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSL-----SRVVNISASHNHAAFVTELGEVF 177

Query: 345 TWGEGDHGRLGHGDL-KSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGN 401
           T G+      GHG++ ++   PT +  L  +    V+ G S T++L+ DG  V++ GS  
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQ-VYTCGSNT 236

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISF 460
            G+LGH DT    TPK++E       V +V AG S++ A+T DG V+ +G     S  +F
Sbjct: 237 HGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFG-----SCTNF 291

Query: 461 -------HTPVLVTGLSSHQ-----IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  H  +    + S +     +V VS GD H +AL     VY WG    G  G  +
Sbjct: 292 CLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGD 351

Query: 509 FSNPVDQPSKVVGLEDVCVRQICA 532
             N    P  +  L+     Q+CA
Sbjct: 352 -ENDKTSPELISSLKSQVAVQVCA 374



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 22/194 (11%)

Query: 190 VYTWG-----CNLHHQILDEVRGKCSRPR-LQSLPSNIRHI---EAGQFCTFLLDSTGGL 240
           VY++G     C  H    DE+R     PR +QS      H+    AG      LD+ G +
Sbjct: 282 VYSFGSCTNFCLGHGDQHDELR-----PRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336

Query: 241 LVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G+G+   LG  +   +  P+ +    + V++ V    +     +T EG V+++G   
Sbjct: 337 YTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCA-RKRKTFVLTDEGSVFAFGWMG 395

Query: 298 HGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G LG    G++    RP+ ++  L    V+Q+S G  H+ AVT  G+++ +G+ +  +L
Sbjct: 396 FGSLGFPDRGSSDKVMRPR-VLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQL 454

Query: 355 GHGDLKSRHTPTLV 368
           G   ++    PT +
Sbjct: 455 GQEYIRGCLKPTEI 468


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 140/293 (47%), Gaps = 40/293 (13%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +Y  GW     LG+ N+  Q  P+ VP++  +     S  S A    +   G++Y+WG  
Sbjct: 32  LYAWGWNNFGQLGIGNSISQYSPQLVPIQNVLFVACKSSVSAA----IDKSGKLYTWGRS 87

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           + G LG+G   +   P L+   L       V+ G+ H AA+T DG LYTWG  DHG+LGH
Sbjct: 88  KFGLLGNGQVENINIPTLVEC-LKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGH 146

Query: 357 G-----------------DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
                             +L S   P LV     V  VS G+  TL+LS DG+ V+S+G 
Sbjct: 147 SFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDDGN-VYSVGL 205

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
              G LG+E    +  + K I  L+   + ++ +GT FSVAL  DG +F WG      LG
Sbjct: 206 NKKGILGYETKNAEELSFKQISNLK--NIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLG 263

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             S S+   TP  + GL   +I   S G+  + ALS    +Y WG    GQ G
Sbjct: 264 TPSPSV-IQTPQQIKGLP--KIKQFSCGEQFIGALSADGVLYTWGFGGDGQLG 313



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 37/278 (13%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           V S+ ++Y+WG    G+LG GN++SQ  P+L+      + V  V+   S SAA+ + G L
Sbjct: 26  VFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVP----IQNVLFVACKSSVSAAIDKSGKL 81

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           YTWG    G LG+G +++ + PTLV  L   D   V+CG  H   +++DG  +++ G+ +
Sbjct: 82  YTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRDGQ-LYTWGNQD 140

Query: 402 LGKLGH-----------------EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
            GKLGH                 ++ G    P++++    F+V +V  G  F++ L+ DG
Sbjct: 141 HGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKL--NFKVHQVSLGDQFTLILSDDG 198

Query: 445 LVFWWGLGLRSSSISFHTPVLVTGLSSHQ------IVDVSIGDSHVLALSQYNEVYAWGS 498
            V+   +GL    I  +       LS  Q      I+ +  G    +AL     ++AWGS
Sbjct: 199 NVY--SVGLNKKGILGYETKNAEELSFKQISNLKNIIQIDSGTDFSVALDSDGNMFAWGS 256

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           N  GQ G  + S  +  P ++ GL    ++Q   G  F
Sbjct: 257 NYFGQLGTPSPS-VIQTPQQIKGLPK--IKQFSCGEQF 291



 Score = 70.9 bits (172), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)

Query: 188 SKVYTWGCNLHHQI---LDEVR--------------GKCSRPRLQSLPSNIRHIEAGQFC 230
            ++YTWG   H ++    D +               G    P L  L   +  +  G   
Sbjct: 131 GQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQF 190

Query: 231 TFLLDSTGGLLVYG---KGWLGLANTTIQPLP-KRVPLEAAIVSLSVSKCSEAHVLTVTS 286
           T +L   G +   G   KG LG      + L  K++     I+ +          + + S
Sbjct: 191 TLILSDDGNVYSVGLNKKGILGYETKNAEELSFKQISNLKNIIQID---SGTDFSVALDS 247

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           +G +++WG    G+LG  +    + P+ I G     ++ Q S G     A++ DG+LYTW
Sbjct: 248 DGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGL---PKIKQFSCGEQFIGALSADGVLYTW 304

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G G  G+LG    +   TP  ++   ++  VSCG++H  ++S +   ++  G G  G+LG
Sbjct: 305 GFGGDGQLGTPSKQDIPTPHKISFDHNIDKVSCGQAHVGIISNN--KLYMHGRGKEGQLG 362

Query: 407 H-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              +T    + +    L    V K+  G S S A+
Sbjct: 363 RGSETESPNSSRYSPLLVLENVLKIACGGSHSFAI 397



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 30/220 (13%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           LY WG  + G+LG G+  S+++P LV  + +V  V+C  S +  + + G  +++ G    
Sbjct: 32  LYAWGWNNFGQLGIGNSISQYSPQLVP-IQNVLFVACKSSVSAAIDKSG-KLYTWGRSKF 89

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G LG+     +  P ++E L+    + V  G     A+T DG ++ WG      LG    
Sbjct: 90  GLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFD 149

Query: 457 SI----------------SFHTPVLVT-GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           ++                S   P LV      HQ   VS+GD   L LS    VY+ G N
Sbjct: 150 NLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQ---VSLGDQFTLILSDDGNVYSVGLN 206

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             G  G +  +       ++  L+++   QI +G+ FS+A
Sbjct: 207 KKGILGYETKNAEELSFKQISNLKNII--QIDSGTDFSVA 244


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 142/290 (48%), Gaps = 32/290 (11%)

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK--RVTQVSAGH 331
           + C + H + +T EG VYSWG   +G LGHGN+ SQ  PK +   L      +T ++ G 
Sbjct: 3   AACGKLHTVALTEEGRVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGE 61

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ 389
            H+ AV +DG L+TWG   +G+LGHGD K+   P  V  L     +  + G  H+LVL+ 
Sbjct: 62  FHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLT- 120

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           + + V++ GS   G+LG E   K +  P ++  LR+  V  +  G S S+AL     ++ 
Sbjct: 121 EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYS 180

Query: 449 WG------LGL---RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQY-------- 490
           WG      LGL   RSS +  H    +T     Q+  +S G  H +A  S+Y        
Sbjct: 181 WGRNDCGQLGLGHYRSSPVPEH----LTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPL 236

Query: 491 NEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +VY WG    GQ G D  +S  V  P  V  L    +R + AG   S A
Sbjct: 237 EKVYTWGRGEEGQLGHDELYSRCV--PKVVQTLLARGIRAVAAGGFSSAA 284



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 23/237 (9%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT-----LVTELSDVGAVSCGE 381
            + G  H+ A+TE+G +Y+WG  + G LGHG+ KS+  P      L+  +  +  ++CGE
Sbjct: 3   AACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMPSITTIACGE 61

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            HTL + QDG T+W+ G    G+LGH D      P+ +EAL K    K  AG   S+ LT
Sbjct: 62  FHTLAVGQDG-TLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLT 120

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
               V+ +G      LGL S       P +V+ L    +  ++ G SH +AL +  ++Y+
Sbjct: 121 EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYS 180

Query: 496 WGSNTMGQCGQDNF-SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT-------VPP 544
           WG N  GQ G  ++ S+PV  P  +   +   V+QI  G   +IA+        VPP
Sbjct: 181 WGRNDCGQLGLGHYRSSPV--PEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPP 235



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 26/284 (9%)

Query: 188 SKVYTWGC--------NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
            +VY+WGC        N   Q+L +      RP + S+PS I  I  G+F T  +   G 
Sbjct: 17  GRVYSWGCANGALGHGNSKSQLLPKA---LDRPLIYSMPS-ITTIACGEFHTLAVGQDGT 72

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           L  +G+   G LG  +     LP+RV      + +  +   + H L +T   +VY++G  
Sbjct: 73  LWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQ-HSLVLTEANKVYAFGSN 131

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
             G+LG  + +       I+  L    V  ++ G+SHS A+ +   LY+WG  D G+LG 
Sbjct: 132 VFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGL 191

Query: 357 GDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDG--------HTVWSMGSGNLGKLG 406
           G  +S   P  +T  + S V  +SCG  H +    +           V++ G G  G+LG
Sbjct: 192 GHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLG 251

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           H++      PKV++ L    +R V AG   S A+     ++ WG
Sbjct: 252 HDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 21/188 (11%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-----RLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           +KVY +G N+  Q+  E + K S       RL+   S + HI  G   +  L  +  L  
Sbjct: 123 NKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRR--SGVCHITCGYSHSMALLKSEQLYS 180

Query: 243 YGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE---------GEV 290
           +G+   G LGL +    P+P+ + +        +S C   H +   SE          +V
Sbjct: 181 WGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQIS-CGYDHNIAFVSEYAGPGVPPLEKV 239

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           Y+WG GE G+LGH    S+  PK++   L  + +  V+AG   SAA+ E   LYTWG   
Sbjct: 240 YTWGRGEEGQLGHDELYSRCVPKVVQT-LLARGIRAVAAGGFSSAAIDEAKQLYTWGCSR 298

Query: 351 HGRLGHGD 358
            G+LGHGD
Sbjct: 299 EGQLGHGD 306


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 155/332 (46%), Gaps = 32/332 (9%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGL 240
           I     +VY WG     ++   +    S P++    S+IR  ++  G++ T  L  +G +
Sbjct: 318 IVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEYHTCALTDSGEV 377

Query: 241 LVYGKG-----WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
             +G        +       Q L  ++ L    +S+S   C E H   V+S G ++++G 
Sbjct: 378 YAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIVSSCGRLFTYGD 437

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE-----------DGLLY 344
           G  G LGHG+  S   PK +   L G  V  V+ G  H+AA+ E            G L+
Sbjct: 438 GTFGVLGHGSYHSFSSPKEVES-LKGLCVRSVACGTWHTAAIIEISAERFKYNTSTGKLF 496

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG+ D GRLGH D  ++  PT V++L D     VSCG   TL L+  G  V++MGS   
Sbjct: 497 TWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGK-VFAMGSAKY 555

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA-LTWDGLVFWWG------LGLRS 455
           G+LG+          V+E + K    K+ +  S+ VA LT  G V+ WG      LGL  
Sbjct: 556 GQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGD 613

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           +  + +TP  V  L   Q+  ++ G S  +A+
Sbjct: 614 TE-NRYTPCFVEALRDRQVDTITCGPSFTVAI 644



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 120/250 (48%), Gaps = 29/250 (11%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H   VT +GEVY WG G+ G+LG    +    PK I+  L   RV  V+ G  H+ A+T+
Sbjct: 315 HAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPK-IVDTLSDIRVKNVACGEYHTCALTD 373

Query: 340 DGLLYTWGEG-------DHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
            G +Y WG         D GR+    L   H  +L  E   + +++CGE HT ++S  G 
Sbjct: 374 SGEVYAWGNDVSCSDLVDEGRIRSQWLT--HKLSLPVEGISISSIACGEWHTAIVSSCGR 431

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL-----------T 441
            +++ G G  G LGH      ++PK +E+L+   VR V  GT  + A+           T
Sbjct: 432 -LFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEISAERFKYNT 490

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
             G +F WG      LG  + +++   P  V+ L  +  V VS G    LAL+   +V+A
Sbjct: 491 STGKLFTWGDADEGRLG-HADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKVFA 549

Query: 496 WGSNTMGQCG 505
            GS   GQ G
Sbjct: 550 MGSAKYGQLG 559



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 145/341 (42%), Gaps = 23/341 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVPLEAAIVSLSVSKC 276
           +++++  G     ++   G +  +G+G  G     I      PK V   + I   +V+ C
Sbjct: 305 DVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVA-C 363

Query: 277 SEAHVLTVTSEGEVYSWG--VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E H   +T  GEVY+WG  V     +  G   SQ     +   + G  ++ ++ G  H+
Sbjct: 364 GEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHT 423

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL----- 387
           A V+  G L+T+G+G  G LGHG   S  +P  V  L    V +V+CG  HT  +     
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEISA 483

Query: 388 -----SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
                +     +++ G  + G+LGH D      P  +  L  +   +V  G   ++ALT 
Sbjct: 484 ERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTN 543

Query: 443 DGLVFWWGLGLRSSSISFHT---PVLVTGLSSHQIVD-VSIGDSHVLALSQYNEVYAWGS 498
            G VF  G        + H     V+V G+   + V  +S G  HV  L+    VY WG 
Sbjct: 544 MGKVFAMGSAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGK 603

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              G+ G  +  N    P  V  L D  V  I  G  F++A
Sbjct: 604 GENGELGLGDTENRYT-PCFVEALRDRQVDTITCGPSFTVA 643



 Score = 73.6 bits (179), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 16/182 (8%)

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           T + DV  V+ G +H  ++++ G  V+  G G  G+LG      +++PK+++ L   RV+
Sbjct: 301 TAMLDVQNVALGGNHAAIVTKQGE-VYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVK 359

Query: 429 KVCAGTSFSVALTWDGLVFWWGLG-----------LRSSSISFHTPVLVTGLSSHQIVDV 477
            V  G   + ALT  G V+ WG             +RS  ++    + V G+S   I  +
Sbjct: 360 NVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGIS---ISSI 416

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           + G+ H   +S    ++ +G  T G  G  ++ +    P +V  L+ +CVR +  G+  +
Sbjct: 417 ACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSY-HSFSSPKEVESLKGLCVRSVACGTWHT 475

Query: 538 IA 539
            A
Sbjct: 476 AA 477



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           PK++E+     V+ V  G + +  +T  G V+ WG G      +   +   +P +V  LS
Sbjct: 295 PKLLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLS 354

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
             ++ +V+ G+ H  AL+   EVYAWG++
Sbjct: 355 DIRVKNVACGEYHTCALTDSGEVYAWGND 383


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 13/250 (5%)

Query: 211 RPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           +PRL      I  + + AG   T  L   G +   G    G LG  +T  +P PK + + 
Sbjct: 206 KPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRV 324
           +++V ++      +++L+VT  G VYS+G G +  LGHG    + +P+ I      G  +
Sbjct: 266 SSVVQIAAGP---SYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHI 322

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            +VSAG  H+ A+  +G +YTWG+G  G LGHGD   + TP L+T L +  V  V   + 
Sbjct: 323 VRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKR 382

Query: 383 HTLVLSQDG--HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            T VL   G  +   SMG G+LG L    +GKV  P++++ LR   V ++  G   +V +
Sbjct: 383 KTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVI 442

Query: 441 TWDGLVFWWG 450
           T  G +F +G
Sbjct: 443 TSRGQIFGFG 452



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 121/236 (51%), Gaps = 16/236 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +T +G VY+ G   HG+LGHG+T  +  PK+I        V Q++AG S+  +VTE+G +
Sbjct: 231 LTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIE---VLSSVVQIAAGPSYILSVTENGTV 287

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGS 399
           Y++G G +  LGHG+      P  + +    G     VS G+ H + L  +G+ V++ G 
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGY-VYTWGK 346

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
           G  G LGH D  + TTP+++ +L+   V +VCA    +  L   G V+ +G      LG 
Sbjct: 347 GYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGF 406

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
             R  S     P ++  L +H +  +S G  H + ++   +++ +G N   Q G D
Sbjct: 407 LDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHD 462



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 142/309 (45%), Gaps = 18/309 (5%)

Query: 246 GWLGLANTTIQPLP-KRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G LG  + T Q +   R+  P  A +V +S S     H   V   GEV++ G       G
Sbjct: 140 GVLGQGSETTQCVAFTRIDFPPLARVVHVSASF---NHAAFVMQSGEVFTCGDNSSSCCG 196

Query: 303 HGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           H +T     +P+L+   L G    QV+AG + +  +T  G +YT G   HG+LGHGD + 
Sbjct: 197 HRDTTRPIFKPRLVES-LKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQD 255

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R TP ++  LS V  ++ G S+ L ++++G TV+S GSG    LGH +      P+ I+ 
Sbjct: 256 RPTPKMIEVLSSVVQIAAGPSYILSVTENG-TVYSFGSGANFCLGHGEQHDELQPRAIQK 314

Query: 422 LRK--FRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQI 474
            R+    + +V AG   +VAL  +G V+ WG G          I   TP L+T L +  +
Sbjct: 315 FRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLV 374

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQICA 532
           V V         L     VY +GS   G  G      S  V +P  +  L    V QI  
Sbjct: 375 VQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQIST 434

Query: 533 GSLFSIAYT 541
           G   ++  T
Sbjct: 435 GLYHTVVIT 443



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 60/236 (25%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           VYT G N H Q+          P++  + S++  I AG      +   G +  +G G   
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANF 296

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
               G  +  +QP   +      I  + VS   E H + + S G VY+WG G  G LGHG
Sbjct: 297 CLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDE-HAVALDSNGYVYTWGKGYCGALGHG 355

Query: 305 NTLSQRRPKLIM-----------------------GGLYG-------------------- 321
           + + +  P+L+                        G +YG                    
Sbjct: 356 DEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKV 415

Query: 322 -----------KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                        V+Q+S G  H+  +T  G ++ +G+ +  +LGH  L+S   PT
Sbjct: 416 LKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPT 471


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 105/197 (53%), Gaps = 6/197 (3%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
             I  I  G + +  L   G L  +G+   G LG+  T       ++    A V L+   
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQIS 196

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             EAH + ++  G +YSWG  E G+LG G+T S+  P LI   L  ++V  ++ G SHSA
Sbjct: 197 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI-EALDNQKVEFLACGGSHSA 255

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT 393
            +T+DGLL+T+G G HG+LGH   ++   P LV EL  + V  ++CG  HTL    D   
Sbjct: 256 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGK 315

Query: 394 VWSMGSGNLGKLGHEDT 410
           V+S GSG  G+LG+  T
Sbjct: 316 VFSFGSGKDGQLGNGGT 332



 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 17/259 (6%)

Query: 199 HQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ 256
           HQ+L    G    P+   L  N++   ++ G     +L S G    Y      L + +I 
Sbjct: 76  HQVL-AGSGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESIL 134

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
                   E  I+ ++   C + H L ++  GE+++WG   HG+LG G T        I+
Sbjct: 135 Q-------EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIV 184

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--V 374
             L G  + Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+ +P+L+  L +  V
Sbjct: 185 EHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             ++CG SH+ +L+QDG  +++ G+G  G+LGH  T     P ++  L   RV ++  G 
Sbjct: 245 EFLACGGSHSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGR 303

Query: 435 SFSVALTWD-GLVFWWGLG 452
             ++A   D G VF +G G
Sbjct: 304 WHTLAYVSDFGKVFSFGSG 322



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 15/179 (8%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +++ WG NLH Q+ +       + P+    L  +P  +  I AG+  +  L  +G +  +
Sbjct: 157 ELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP--LAQISAGEAHSMALSMSGNIYSW 214

Query: 244 GK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G+HG
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA--CGGSHSALLTQDGLLFTFGAGKHG 272

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLGHG 357
           +LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG+G
Sbjct: 273 QLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 330



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---LRSSSISFHTPVLV 466
           +G   TPK I+  +  ++  V  G    + L+ DG  F +      LRS SI        
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESI-------- 133

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             L   +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V 
Sbjct: 134 --LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP 191

Query: 527 VRQICAGSLFSIAYTV 542
           + QI AG   S+A ++
Sbjct: 192 LAQISAGEAHSMALSM 207



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 21/168 (12%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG               ++ + K    + I  L++ ++ ++  G
Sbjct: 99  IHSVDQGADHMLILSSDGKP-----------FEYDYSMKHLRSESI--LQEKKIIQITCG 145

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+  +  S  TP +V  L+   +  +S G++H +AL
Sbjct: 146 DYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 205

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS +  L++  V  + C GS
Sbjct: 206 SMSGNIYSWGKNEFGQLGLGH-TESKDSPSLIEALDNQKVEFLACGGS 252



 Score = 47.8 bits (112), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K S   +
Sbjct: 177 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI 236

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           ++L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGN 294

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G TL Q  P
Sbjct: 295 RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP 338


>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 775

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 166/357 (46%), Gaps = 44/357 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           V+ WG N +  +     G  +   + ++P  +  +  G   T +  S+  L V   G   
Sbjct: 342 VWAWGGNSYGAL-----GNDTIETMSTVPVQVPGLSGG--VTVVAASSHALAVRSDGTVW 394

Query: 247 -WLG-----LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            W G     L + T       VP++     ++V+   E H L V S+  V++WG    G+
Sbjct: 395 AWGGNHYGQLGDGTTSERLVAVPVQGLSGVMAVAARQE-HSLAVRSDATVWAWGRNYEGQ 453

Query: 301 LGHGNTLSQRR------PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           LG G T  +RR      PKL         V  V+AG  HS AV  DG ++ WG+ ++G++
Sbjct: 454 LGDGTT--RRREVPVPVPKL-------SSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQV 504

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           G G   SR  P  V  L    AV+ GE+H+LVL  DG TVW+ G  + G+LG+  T    
Sbjct: 505 GDGTETSRKAPVRVPNLGGGVAVAAGENHSLVLRSDG-TVWAWGGNHYGQLGNGITSDSP 563

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---GLRSSSISFHTP----VLVT 467
            P  ++ L       V AG  +S+A+  DG V+ WGL   G      +  +P    V V 
Sbjct: 564 VPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVP 621

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED 524
           GLS    V V+ G SH L +     V+AWGSN  GQ G+      V  P +V GL +
Sbjct: 622 GLSGG--VAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSE 676



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 155/336 (46%), Gaps = 32/336 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+  G N+  Q+ D    +   P ++Q L S +  +  G + +  L S G +   G+   
Sbjct: 92  VWAVGENVFGQLGDGTTSERRVPVQVQGL-SGVVAVAVGAYHSLALRSDGTVWAVGRAAC 150

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G  G A+    P P  VP  +  V+++       H L + S+G V++WG    G+LG G
Sbjct: 151 QGGDGTASDCTVPAP--VPGLSGGVAVAAGGL---HSLALRSDGTVWAWGSNFEGQLGDG 205

Query: 305 NT---LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            T   L   R K + G      V  V+AG  HS AV  DG ++TWG   +G LG G   S
Sbjct: 206 TTNVSLVPVRVKKLTG------VVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSS 259

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED-TGKVTTPKVIE 420
           R  P  V  LS   AV+ G  H+L +  DG TVW  G+  +G+LG      +V  P   +
Sbjct: 260 RKVPVQVQGLSGGVAVAGGVYHSLAVRSDG-TVWGWGANGVGQLGDGTPMRRVLVPVQAQ 318

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    V  V AG S S+A+ +DG V+ WG      LG  +       PV V GLS    
Sbjct: 319 GLSG--VEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSGG-- 374

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           V V    SH LA+     V+AWG N  GQ G    S
Sbjct: 375 VTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTS 410



 Score =  104 bits (259), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 162/347 (46%), Gaps = 32/347 (9%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLP----SNIRHIEAGQFCTFLLDSTGGLLVY 243
           + V+ WG N   Q+ D      +R R   +P    S++  + AG++ +  +   G +  +
Sbjct: 441 ATVWAWGRNYEGQLGD----GTTRRREVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAW 496

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G +G    T +  P RVP     V+++     E H L + S+G V++WG   +G+
Sbjct: 497 GDNEYGQVGDGTETSRKAPVRVPNLGGGVAVA---AGENHSLVLRSDGTVWAWGGNHYGQ 553

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG+G T     P  + G L G     V+AG  +S AV  DG ++ WG    G+LG G   
Sbjct: 554 LGNGITSDSPVPVQVQG-LSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTAS 610

Query: 361 SRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPK 417
               P  V    LS   AV+ G SH LV+  DG TVW+ GS   G++G      +V  P 
Sbjct: 611 DSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDG-TVWAWGSNYDGQVGEGAPRRRVLMPV 669

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSS 471
            ++ L +     V AG + S+A+  DG V+ WG G  +  +   T      PV   GL+ 
Sbjct: 670 QVQGLSEGM--AVAAGYNHSLAVRSDGSVWAWG-GNTAGVLGDGTTDRRTVPVQAQGLTG 726

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
            + V  + G+SH L L      +A GSN  GQ G    +  V  P++
Sbjct: 727 ARAV--AAGESHSLVLRSDGTGWAMGSNASGQIGDGGPTQQVSTPTR 771



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 129/288 (44%), Gaps = 20/288 (6%)

Query: 242 VYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           V+G+  LG   T+ + +P +V   + +V+++V      H L + S+G V  W VG     
Sbjct: 99  VFGQ--LGDGTTSERRVPVQVQGLSGVVAVAVGAY---HSLALRSDGTV--WAVGRAACQ 151

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G   T S       + GL G     V+AG  HS A+  DG ++ WG    G+LG G    
Sbjct: 152 GGDGTASDCTVPAPVPGLSGG--VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTNV 209

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
              P  V +L+ V AV+ GE H+L +  DG TVW+ G    G LG   T     P  ++ 
Sbjct: 210 SLVPVRVKKLTGVVAVAAGEKHSLAVRSDG-TVWTWGFNGYGALGDGTTSSRKVPVQVQG 268

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L       V  G   S+A+  DG V+ WG      LG  +       PV   GLS   + 
Sbjct: 269 LSGGV--AVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSG--VE 324

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            V+ G S  LA+     V+AWG N+ G  G D        P +V GL 
Sbjct: 325 AVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLS 372



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 126/268 (47%), Gaps = 22/268 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H   V  +G V  W VGE+  G+LG G T S+RR  + + GL G  V  V+ G  HS A+
Sbjct: 82  HSWAVRPDGTV--WAVGENVFGQLGDGTT-SERRVPVQVQGLSG--VVAVAVGAYHSLAL 136

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
             DG ++  G     + G G       P  V  LS   AV+ G  H+L L  DG TVW+ 
Sbjct: 137 RSDGTVWAVGRAAC-QGGDGTASDCTVPAPVPGLSGGVAVAAGGLHSLALRSDG-TVWAW 194

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           GS   G+LG   T     P  ++ L    V  V AG   S+A+  DG V+ WG      L
Sbjct: 195 GSNFEGQLGDGTTNVSLVPVRVKKLTG--VVAVAAGEKHSLAVRSDGTVWTWGFNGYGAL 252

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  ++S S   PV V GLS    V V+ G  H LA+     V+ WG+N +GQ G      
Sbjct: 253 GDGTTS-SRKVPVQVQGLSGG--VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMR 309

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            V  P +  GL    V  + AG   S+A
Sbjct: 310 RVLVPVQAQGLSG--VEAVAAGHSLSLA 335



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 101/212 (47%), Gaps = 15/212 (7%)

Query: 319 LYGKRV-TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
           L G R   +++ G +HS AV  DG ++  GE   G+LG G    R  P  V  LS V AV
Sbjct: 67  LGGARARARIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQGLSGVVAV 126

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           + G  H+L L  DG TVW++G     + G       T P  +  L       V AG   S
Sbjct: 127 AVGAYHSLALRSDG-TVWAVGRAAC-QGGDGTASDCTVPAPVPGLSGG--VAVAAGGLHS 182

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL  DG V+ WG      LG  ++++S   PV V  L+   +V V+ G+ H LA+    
Sbjct: 183 LALRSDGTVWAWGSNFEGQLGDGTTNVSL-VPVRVKKLTG--VVAVAAGEKHSLAVRSDG 239

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
            V+ WG N  G  G D  ++    P +V GL 
Sbjct: 240 TVWTWGFNGYGALG-DGTTSSRKVPVQVQGLS 270


>gi|444912395|ref|ZP_21232559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716977|gb|ELW57814.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 391

 Score =  119 bits (298), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 158/341 (46%), Gaps = 18/341 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N + ++ D      S P      S +  + AG+  + +L   G +  +G    G
Sbjct: 59  VWAWGENGNGELGDGTTLSRSTPAQVPGLSGVLAVAAGRNHSLVLRVDGTVWAWGGNSSG 118

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT   +P +VP    + +++    S   +L   S+G V +WG    G LG G T
Sbjct: 119 QLGNGTTTSSLVPLQVPGLGGVKAIAAVAYSSFALL---SDGTVRAWGRNGFGVLGDGTT 175

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
             +  P  +   L   +   ++AG  H+ AV  +G +  WG    G++G G   SR  P 
Sbjct: 176 SDRYTPVPV---LNLSQAVSIAAGGDHAFAVLANGTVMGWGYNYFGQVGDGTTISRTAPV 232

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V  L+ V AVS   S++ V  +   TVWS G   +G+LG   +   T+P  ++      
Sbjct: 233 PVKNLTGVSAVSVMGSNSSVARKSDGTVWSWGDNWVGQLG-VGSAVSTSPTPVQVPGITT 291

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGD 481
              + +G    +AL  DG +  WG  L       ++ + +TPVLV GL+  Q+V ++ G 
Sbjct: 292 AVAIQSGVGHGMALLADGTLKGWGYNLYGQLGDGTTRTRYTPVLVPGLA--QVVHLAAGT 349

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            H LA++   +V+AWG N  G  G D  +     P  VVGL
Sbjct: 350 LHSLAVTADGKVWAWGDNAQGTLG-DGTTTQRLAPVTVVGL 389



 Score =  101 bits (252), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/251 (30%), Positives = 117/251 (46%), Gaps = 12/251 (4%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           ++ H L +  +G V++WG   +G+LG G TLS+  P  +  GL G  V  V+AG +HS  
Sbjct: 46  ADDHTLALRYDGTVWAWGENGNGELGDGTTLSRSTPAQV-PGLSG--VLAVAAGRNHSLV 102

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  DG ++ WG    G+LG+G   S   P  V  L  V A++     +  L  DG TV +
Sbjct: 103 LRVDGTVWAWGGNSSGQLGNGTTTSSLVPLQVPGLGGVKAIAAVAYSSFALLSDG-TVRA 161

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
            G    G LG   T    TP  +  L   +   + AG   + A+  +G V  WG      
Sbjct: 162 WGRNGFGVLGDGTTSDRYTP--VPVLNLSQAVSIAAGGDHAFAVLANGTVMGWGYNYFGQ 219

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
               ++IS   PV V  L+    V V +G +  +A      V++WG N +GQ G  +  +
Sbjct: 220 VGDGTTISRTAPVPVKNLTGVSAVSV-MGSNSSVARKSDGTVWSWGDNWVGQLGVGSAVS 278

Query: 512 PVDQPSKVVGL 522
               P +V G+
Sbjct: 279 TSPTPVQVPGI 289



 Score =  100 bits (248), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 70/183 (38%), Positives = 91/183 (49%), Gaps = 12/183 (6%)

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLS 388
           A   H+ A+  DG ++ WGE  +G LG G   SR TP  V  LS V AV+ G +H+LVL 
Sbjct: 45  AADDHTLALRYDGTVWAWGENGNGELGDGTTLSRSTPAQVPGLSGVLAVAAGRNHSLVLR 104

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            DG TVW+ G  + G+LG+  T     P  +  L   +     A +SF  AL  DG V  
Sbjct: 105 VDG-TVWAWGGNSSGQLGNGTTTSSLVPLQVPGLGGVKAIAAVAYSSF--ALLSDGTVRA 161

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LG  ++S  + TPV V  LS  Q V ++ G  H  A+     V  WG N  G
Sbjct: 162 WGRNGFGVLGDGTTSDRY-TPVPVLNLS--QAVSIAAGGDHAFAVLANGTVMGWGYNYFG 218

Query: 503 QCG 505
           Q G
Sbjct: 219 QVG 221


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  119 bits (298), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 23/267 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V +WG GE G+LG G    +   + +   L    V+ V AG  +S A+  DG L+TWG  
Sbjct: 13  VLAWGSGEDGQLGMGGYEEEDWARGV-AALDALAVSAVVAGSRNSLAICADGRLFTWGWN 71

Query: 350 DHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             G LGH  + K+  +P  V  L+ V  V  + G  H L +   G   ++ G    G+ G
Sbjct: 72  QRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRA-YAWGGNEYGQCG 130

Query: 407 HEDTGKVTTPKVIEALR-----------KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            E   K    +   ALR           K +VR+V AG + SV LT DG V+ WG     
Sbjct: 131 EEAERKEDGTR---ALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPP 187

Query: 456 SSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             I    TPV V GL + ++  +++G  H LAL++   ++AWG+N  GQ G  + + P  
Sbjct: 188 GDIKQISTPVRVQGLENVKV--IAVGAFHNLALTEDGILWAWGNNEYGQLGTGD-TQPRS 244

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
           QP +V GL D+ +  I AG   S A T
Sbjct: 245 QPIRVEGLSDLSLVDIAAGGWHSTALT 271



 Score =  115 bits (289), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 30/296 (10%)

Query: 266 AAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           AA+ +L+VS       + L + ++G +++WG  + G LGH            +  L G  
Sbjct: 39  AALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVS 98

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELS---------D 373
           + Q + G  H  AV + G  Y WG  ++G+ G   + K   T  L  ++           
Sbjct: 99  IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLK 158

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V  V+ G +H++VL+QDGH VW+ G          D  +++TP  ++ L   +V  +  G
Sbjct: 159 VRQVAAGGTHSVVLTQDGH-VWTWGQ----PWPPGDIKQISTPVRVQGLENVKV--IAVG 211

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              ++ALT DG+++ WG      LG   +      P+ V GLS   +VD++ G  H  AL
Sbjct: 212 AFHNLALTEDGILWAWGNNEYGQLGTGDTQPR-SQPIRVEGLSDLSLVDIAAGGWHSTAL 270

Query: 488 SQYNEVYAWGSNTMGQC--GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++  EVYAWG    G+   G D  S+ V Q  +++  ED+   Q+  G   S+A T
Sbjct: 271 TKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDII--QVSCGGTHSVALT 324



 Score =  113 bits (282), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 21/245 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGK--CSRPRLQSLPS--------NIRHIEAGQFCTFLLDSTG 238
           + Y WG N + Q  +E   K   +R   + +P          +R + AG   + +L   G
Sbjct: 117 RAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDG 176

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +  +G+ W       I   P RV     + ++ V      H L +T +G +++WG  E+
Sbjct: 177 HVWTWGQPWPPGDIKQIST-PVRV---QGLENVKVIAVGAFHNLALTEDGILWAWGNNEY 232

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           G+LG G+T  + +P + + GL    +  ++AG  HS A+T++G +Y WG G+HGRLG GD
Sbjct: 233 GQLGTGDTQPRSQP-IRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGD 291

Query: 359 LKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            KS H      EL    D+  VSCG +H++ L++DG  ++S G G+ G+LG+    KVTT
Sbjct: 292 DKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGR-MFSYGRGDHGRLGYGR--KVTT 348

Query: 416 PKVIE 420
              +E
Sbjct: 349 GHPME 353



 Score =  101 bits (251), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 28/219 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG       + ++    S P R+Q L  N++ I  G F    L   G L  +G    
Sbjct: 178 VWTWGQPWPPGDIKQI----STPVRVQGL-ENVKVIAVGAFHNLALTEDGILWAWGNNEY 232

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG  +T  +  P RV     +  LS+   +    H   +T EGEVY+WG GEHG+LG 
Sbjct: 233 GQLGTGDTQPRSQPIRV---EGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGF 289

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+  S       +  L G+ + QVS G +HS A+T DG ++++G GDHGRLG+G   +  
Sbjct: 290 GDDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTG 349

Query: 364 TPTLV--------TELSDVGA------VSCGESHTLVLS 388
            P  V        T   D G       V+CG  HTL ++
Sbjct: 350 HPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 105/197 (53%), Gaps = 6/197 (3%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
             I  I  G + +  L   G L  +G+   G LG+  T       ++    A V L+   
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQIS 196

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             EAH + ++  G +YSWG  E G+LG G+T S+  P LI   L  ++V  ++ G SHSA
Sbjct: 197 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI-EALDNQKVEFLACGGSHSA 255

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT 393
            +T+DGLL+T+G G HG+LGH   ++   P LV EL  + V  ++CG  HTL    D   
Sbjct: 256 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDFGK 315

Query: 394 VWSMGSGNLGKLGHEDT 410
           V+S GSG  G+LG+  T
Sbjct: 316 VFSFGSGKDGQLGNGGT 332



 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 17/259 (6%)

Query: 199 HQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ 256
           HQ+L    G    P+   L  N++   ++ G     +L S G    Y      L + +I 
Sbjct: 76  HQVL-AGSGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESIL 134

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
                   E  I+ ++   C + H L ++  GE+++WG   HG+LG G T        I+
Sbjct: 135 Q-------EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIV 184

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--V 374
             L G  + Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+ +P+L+  L +  V
Sbjct: 185 EHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             ++CG SH+ +L+QDG  +++ G+G  G+LGH  T     P ++  L   RV ++  G 
Sbjct: 245 EFLACGGSHSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGR 303

Query: 435 SFSVALTWD-GLVFWWGLG 452
             ++A   D G VF +G G
Sbjct: 304 WHTLAYVSDFGKVFSFGSG 322



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 15/179 (8%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +++ WG NLH Q+ +       + P+    L  +P  +  I AG+  +  L  +G +  +
Sbjct: 157 ELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP--LAQISAGEAHSMALSMSGNIYSW 214

Query: 244 GK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G+HG
Sbjct: 215 GKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA--CGGSHSALLTQDGLLFTFGAGKHG 272

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLGHG 357
           +LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG+G
Sbjct: 273 QLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNG 330



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---LRSSSISFHTPVLV 466
           +G   TPK I+  +  ++  V  G    + L+ DG  F +      LRS SI        
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESI-------- 133

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             L   +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V 
Sbjct: 134 --LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP 191

Query: 527 VRQICAGSLFSIAYTV 542
           + QI AG   S+A ++
Sbjct: 192 LAQISAGEAHSMALSM 207



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 21/168 (12%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG               ++ + K    + I  L++ ++ ++  G
Sbjct: 99  IHSVDQGADHMLILSSDGKP-----------FEYDYSMKHLRSESI--LQEKKIIQITCG 145

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+  +  S  TP +V  L+   +  +S G++H +AL
Sbjct: 146 DYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 205

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS +  L++  V  + C GS
Sbjct: 206 SMSGNIYSWGKNEFGQLGLGH-TESKDSPSLIEALDNQKVEFLACGGS 252



 Score = 47.8 bits (112), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K S   +
Sbjct: 177 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLI 236

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           ++L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGN 294

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G TL Q  P
Sbjct: 295 RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIP 338


>gi|444912858|ref|ZP_21233017.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716551|gb|ELW57397.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 394

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 134/264 (50%), Gaps = 29/264 (10%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L   S+G V++WG    G+LG G T  +  P  I        + +V+AGH HS A+  
Sbjct: 67  HSLARRSDGSVWAWGENTTGQLGDGTTTLRSTPTKIA---TLSNMERVAAGHGHSLAL-R 122

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
            G ++ WG+ D G +       +  P  V  LSDV A++ G SH+L LSQ G  VWS G+
Sbjct: 123 AGKVWAWGKPDSGAI-------KTAPVEVPGLSDVVAIAAGFSHSLALSQSGQ-VWSWGN 174

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LG-LRS 455
            N G   H +     TP  +E L    ++ + AG S+S+AL  DG V+ WG   LG L S
Sbjct: 175 DNAG---HANN----TPVQVEGLPG--IKAIAAGVSYSLALGTDGSVWAWGDNTLGQLGS 225

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
            + S  TPV V  L    I  ++ G +H LAL     V+ WG+N  GQ G    S    Q
Sbjct: 226 DTPSSATPVKVAELP--MITFIAAGSTHALALDTAGGVWTWGANDHGQLGDGTTSTKRSQ 283

Query: 516 PSKVVGLEDVCVRQICAGSLFSIA 539
           P +V GL +  ++ +  G+  S+A
Sbjct: 284 PQQVSGLAN--IQALAGGNGHSLA 305



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 166/365 (45%), Gaps = 50/365 (13%)

Query: 193 WGCNLHHQILDEVRGKCSR---------PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           WGC        +V   C R         P   S P+ I H+ +    +    S G +  +
Sbjct: 24  WGC---VDFDKDVEAYCQRNPSVCLTSLPDGGSQPAPITHVSSRGQHSLARRSDGSVWAW 80

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G+   G LG   TT++  P ++   A + ++        H L + + G+V++WG  + G 
Sbjct: 81  GENTTGQLGDGTTTLRSTPTKI---ATLSNMERVAAGHGHSLALRA-GKVWAWGKPDSGA 136

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +    T     P L         V  ++AG SHS A+++ G +++WG  + G        
Sbjct: 137 I---KTAPVEVPGL-------SDVVAIAAGFSHSLALSQSGQVWSWGNDNAGH------- 179

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           + +TP  V  L  + A++ G S++L L  DG +VW+ G   LG+LG  DT    TP  + 
Sbjct: 180 ANNTPVQVEGLPGIKAIAAGVSYSLALGTDG-SVWAWGDNTLGQLG-SDTPSSATPVKVA 237

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L       + AG++ ++AL   G V+ WG      LG  ++S     P  V+GL++ Q 
Sbjct: 238 ELPMITF--IAAGSTHALALDTAGGVWTWGANDHGQLGDGTTSTKRSQPQQVSGLANIQA 295

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           +  + G+ H LAL+  N+V AWG ++ GQ G D       +P K   L +     I AG 
Sbjct: 296 L--AGGNGHSLALNSANDVMAWGRDSAGQLGDDLSLKDQSRPVKTSSLTNATA--ISAGH 351

Query: 535 LFSIA 539
             S+A
Sbjct: 352 SHSLA 356



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 31/323 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ WG N   Q+ D      S P   +  SN+  + AG   +  L + G +  +GK    
Sbjct: 77  VWAWGENTTGQLGDGTTTLRSTPTKIATLSNMERVAAGHGHSLALRA-GKVWAWGK---- 131

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
             +  I+  P  VP  + +V+++      +H L ++  G+V+SWG   +   GH N    
Sbjct: 132 PDSGAIKTAPVEVPGLSDVVAIA---AGFSHSLALSQSGQVWSWG---NDNAGHANNT-- 183

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
               + + GL G  +  ++AG S+S A+  DG ++ WG+   G+LG  D  S  TP  V 
Sbjct: 184 ---PVQVEGLPG--IKAIAAGVSYSLALGTDGSVWAWGDNTLGQLGS-DTPSSATPVKVA 237

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVR 428
           EL  +  ++ G +H L L   G  VW+ G+ + G+LG   T  K + P+ +  L    ++
Sbjct: 238 ELPMITFIAAGSTHALALDTAGG-VWTWGANDHGQLGDGTTSTKRSQPQQVSGLAN--IQ 294

Query: 429 KVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
            +  G   S+AL     V  WG      LG   S      PV  + L+      +S G S
Sbjct: 295 ALAGGNGHSLALNSANDVMAWGRDSAGQLGDDLSLKDQSRPVKTSSLT--NATAISAGHS 352

Query: 483 HVLALSQYNEVYAWGSNTMGQCG 505
           H LA+     ++AWGSN  G+ G
Sbjct: 353 HSLAVLSDGSLFAWGSNENGRLG 375


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           YG+  LG  +  I   P+R           V  C   H + V  +G VY+ G  + G+LG
Sbjct: 9   YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
           H    S+++P+ ++  L  + +  V+ G +H+ A+ + G +Y WG    G+LG  G  + 
Sbjct: 68  H--EKSRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124

Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
              P  +  LSD+    V+CG  H+L LS+    V+  G    G+LG   D  K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           I++L      +V AG + S  LT  G +F WG      LGL   +  +  P L+  L S 
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +IV +  G+ H  AL++   V+ +G+   GQ G ++ S+ ++ P KV  L    V Q+  
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301

Query: 533 GSLFSIAYTVPPSNSALS 550
           G   + A+ VP S    S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +       YN          GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 NWF----SYN----------GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
              P N      F   C D     +T+    ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410



 Score =  104 bits (260), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  RR    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AV+CGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+   +  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEEC--IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 157/340 (46%), Gaps = 27/340 (7%)

Query: 189 KVYTWGCNLHHQI-LDEVRGK--CSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYG 244
           ++Y WG   H Q+ L  +  +   +  ++   P + ++ +  G   T  L +TG +   G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 245 KG-WLGLANTTIQPLPKRVPL-------EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
              +  L +      P+  P        +  I+ +    C   H L ++  G+V SWG  
Sbjct: 66  SNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQIC---CGSRHSLALSDWGQVLSWGDN 122

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG- 355
           + G+LGH       +   ++  L  K V Q++ G++HS A+T  G LY+WG   +G+LG 
Sbjct: 123 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 182

Query: 356 --HGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
               DL   + P  +T L  +   A++CG +H+ ++S+ G  V+  G  N G+LG  D  
Sbjct: 183 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSG-AVFGWGRNNCGQLGLNDET 241

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLV 466
             + P  ++ LR   VR V  G  FSV LT +G VF  G G         S +   P +V
Sbjct: 242 NRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV 301

Query: 467 TGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
             L    I  V+ G+ H LAL      VYA+G  + GQ G
Sbjct: 302 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 341



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 135/275 (49%), Gaps = 21/275 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + S  E+Y WG   HG+LG G    ++   P  I        V QV+ GH H+  +T  G
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATG 59

Query: 342 LLYTWGEGDHGRLGHGDL---KSRHTP-TLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
            +Y  G  D+ +LGH DL   + R +P  L+ EL D  +  + CG  H+L LS  G  V 
Sbjct: 60  KVYACGSNDYSQLGH-DLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQ-VL 117

Query: 396 SMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           S G  + G+LGH  D   V  PKV+  L    V ++  G + S+ALT  G ++ WG    
Sbjct: 118 SWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 177

Query: 451 --LGLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             LG+ S +   H   P+ +T L    +  ++ G +H   +S+   V+ WG N  GQ G 
Sbjct: 178 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 237

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           ++ +N    P+++  L  + VR +  G  FS+  T
Sbjct: 238 NDETNR-SYPTQLKTLRTLGVRFVACGDEFSVFLT 271



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 23/247 (9%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +V +WG N   Q+     G  +   +  LP  +R         I  G   +  L S G L
Sbjct: 115 QVLSWGDNDCGQL-----GHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGEL 169

Query: 241 LVYGK---GWLGLA---NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
             +G    G LG+    + T    P R+     I  L+   C   H   ++  G V+ WG
Sbjct: 170 YSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWG 228

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
               G+LG  +  ++  P   +  L    V  V+ G   S  +T +G ++T G G +G+L
Sbjct: 229 RNNCGQLGLNDETNRSYPTQ-LKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 287

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG   +   P +V EL  S +  V+CG  HTL L      V++ G G+ G+LG   T  
Sbjct: 288 GHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKS 347

Query: 413 VTTPKVI 419
           +  P+V+
Sbjct: 348 LMLPQVV 354



 Score = 49.3 bits (116), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           V+ WG N   Q+ L++   +    +L++L +  +R +  G   +  L + GG+   G G 
Sbjct: 224 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 283

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
              LG   ++ + LP+ V +E    +++   C   H L  V S G VY++G+G  G+LG 
Sbjct: 284 YGQLGHGFSSNEMLPRMV-MELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 342

Query: 304 GNTLSQRRPKLIMG 317
            +T S   P++++G
Sbjct: 343 RSTKSLMLPQVVIG 356


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG+ +T     P+R+          +S  S  HV+  T+EGEVY+WG   + +LG+G 
Sbjct: 52  GCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGT 111

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T +   P  I   L  K+VT+V+ G  HS  +T DG +YTWG  + G++G G   ++  P
Sbjct: 112 TNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIP 171

Query: 366 TLVTE-LSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             VT  L +  AV  +CG+  ++ + ++G  V+  G    G+LG  ++G   TP  I AL
Sbjct: 172 RRVTSCLQNKIAVNIACGQMCSMAVVENGE-VYVWGYNGNGQLGLGNSGNQPTPCRIAAL 230

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQI 474
           +  RV++V  G + ++ LT +G ++ WG         G RS+  S+  P+ V      ++
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQ-SYPVPITV---DKDRV 286

Query: 475 VDVSIGDSH--VLALSQYNEVYAWG 497
           ++++   S     A +Q ++VY WG
Sbjct: 287 IEIAACHSAHTSAAKTQGSQVYMWG 311



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 126/242 (52%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           VL VT   EV++ G    G LG G+T +   P+  +  L GK++T +S G   H    T 
Sbjct: 34  VLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRR-LDTLCGKKITCLSYGSGPHVVVATA 92

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TELSD--VGAVSCGESHTLVLSQDGHTVWS 396
           +G +YTWG   + +LG+G   +   P  + T L +  V  V+CG  H+++L+ DG  V++
Sbjct: 93  EGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGE-VYT 151

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR-KVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T     P+ + +  + ++   +  G   S+A+  +G V+ WG     
Sbjct: 152 WGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNG 211

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL +S  +  TP  +  L   ++  V+ G +H L L+   ++YAWG+N+ GQ G  N 
Sbjct: 212 QLGLGNSG-NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNR 270

Query: 510 SN 511
           SN
Sbjct: 271 SN 272



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 17/259 (6%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLT---YNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKC 209
           +GD ++S     +D+    K+T   Y  G    ++ A  +VYTWG N + Q+ +      
Sbjct: 56  VGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNS 115

Query: 210 SRPRLQS---LPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP 263
             P   S   +   +  +  G   + +L S G +  +G    G +G  +T  Q +P+RV 
Sbjct: 116 LLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVT 175

Query: 264 --LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
             L+  I +++++ C +   + V   GEVY WG   +G+LG GN+ +Q  P  I   L G
Sbjct: 176 SCLQNKI-AVNIA-CGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRI-AALQG 232

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC 379
            RV +V+ G++H+  +T++G +Y WG   +G+LG G+  ++  P  +T   D  +   +C
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAAC 292

Query: 380 GESHTLVLSQDGHTVWSMG 398
             +HT      G  V+  G
Sbjct: 293 HSAHTSAAKTQGSQVYMWG 311



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 7/157 (4%)

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL-TWDGLVFW 448
           + + V+++G+   G LG  DT     P+ ++ L   ++  +  G+   V + T +G V+ 
Sbjct: 39  ENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYT 98

Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           WG      LG  +++ S     + T L + ++ +V+ G  H + L+   EVY WG N  G
Sbjct: 99  WGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSG 158

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           Q G  + +N          L++     I  G + S+A
Sbjct: 159 QVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMA 195


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 19/303 (6%)

Query: 227 GQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVL 282
           G   + ++  +G L V+G    G LGL +T     P  V PL+   V      C   H +
Sbjct: 46  GDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVA--CGRNHTI 103

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
             +  G+++S+G  E G+LGH +  ++  PK I   +    + Q++ G  HS  ++EDG 
Sbjct: 104 VYSESGKLFSFGCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSIILSEDGD 162

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           +Y WG  + G+LG G+      P  +    +V +VSCG  HT ++++DG  +++ G   L
Sbjct: 163 VYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVSCGYYHTALVTRDGF-LYTFGENEL 221

Query: 403 GKLGHEDT--GKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
           GKLG   +     T P+ V           V  G   +VA+T  G  + WG      LG 
Sbjct: 222 GKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGH 281

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ--DNFSN 511
            +  +  + P  +  LS  + + VS G+SH   +++  +V+ +G    G+ GQ  D+FSN
Sbjct: 282 GTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSN 341

Query: 512 PVD 514
             D
Sbjct: 342 SFD 344



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 139/274 (50%), Gaps = 15/274 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C + H   VT  G +Y +G  + G+LG G+T S  +P  +   L  ++V +V+ G +H+ 
Sbjct: 45  CGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKP-LKPEKVRKVACGRNHTI 103

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT 393
             +E G L+++G  + G+LGH D ++   P  +  +   ++  ++CG  H+++LS+DG  
Sbjct: 104 VYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDG-D 162

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           V+  G+ N G+LG  +  + + PK ++   K  V  V  G   +  +T DG ++ +G   
Sbjct: 163 VYVWGNNNEGQLGLGEEVENSLPKKLKF--KKEVVSVSCGYYHTALVTRDGFLYTFGENE 220

Query: 451 ---LGLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              LGL SS +S  T    +     + + + VS G  H +A+++    YAWG  + GQ G
Sbjct: 221 LGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLG 280

Query: 506 QDNFSNPVDQPSKVVGLE-DVCVRQICAGSLFSI 538
                  V++P ++  L    C+   C  S  ++
Sbjct: 281 HGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAV 314



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 21/214 (9%)

Query: 190 VYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           VY WG N   Q+   +EV    S P+       +  +  G + T L+   G L  +G+  
Sbjct: 163 VYVWGNNNEGQLGLGEEVEN--SLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENE 220

Query: 248 LG--------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           LG        L+NTT+   P+ V + A         C   H + +T +G  Y+WG G  G
Sbjct: 221 LGKLGLSSSQLSNTTV---PQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQG 277

Query: 300 KLGHGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +LGHG  L +   PK I   L G++   VS G SH+A VTE G ++T+G+G HG+LG G+
Sbjct: 278 QLGHGTKLLEVNEPKQIK-KLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGE 336

Query: 359 --LKSRHTPTLVTELS--DVGAVSCGESHTLVLS 388
               +   P  ++  +  +V  VSCG  HTLVL+
Sbjct: 337 DSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLA 370


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 105/203 (51%), Gaps = 6/203 (2%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
             I  I  G + +  L   G L  +G+   G LG+          ++    A V L+   
Sbjct: 138 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 197

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             EAH + ++  G +YSWG  E G+LG G+T S+  P LI  GL  ++V  V+ G SHSA
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIE-GLDNQKVEFVACGGSHSA 256

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
            +T+DGLL+T+G G HG+LGH   ++   P LV EL    V  ++CG  HTL    D   
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGK 316

Query: 394 VWSMGSGNLGKLGHEDTGKVTTP 416
           V+S GSG  G+LG+  T     P
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+  P+L+  L +  V  V+CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+ +L+QDG  +++ G+G  G+LGH  T     P ++  L  +RV ++  G   ++A   
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 139/285 (48%), Gaps = 29/285 (10%)

Query: 236 STGGLLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE 289
           S G L V  +G  G      LA +     PK + L   +   SV + +E H+L ++S+G+
Sbjct: 59  SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAE-HMLILSSDGK 117

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            + +       L   N L +            K++ Q++ G  HS A+++ G L+ WG+ 
Sbjct: 118 PFEYDNYSMKHLRFENVLQE------------KKIIQITCGDYHSLALSKGGELFAWGQN 165

Query: 350 DHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            HG+LG G    S  TP +V  L+ V    +S GE+H++ LS  G+ ++S G    G+LG
Sbjct: 166 LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGN-IYSWGKNEFGQLG 224

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFH 461
              T     P +IE L   +V  V  G S S  LT DGL+F +G G       +S+ +  
Sbjct: 225 LGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL 284

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQCG 505
            P LV  L  +++  ++ G  H LA +S   +V+++GS   GQ G
Sbjct: 285 RPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212

Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 213 YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 271 KHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 356 HGDLKSRHTP 365
           +G  + +  P
Sbjct: 330 NGGTRDQLMP 339



 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFENVLQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS + GL++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNEFGQLGLGH-TESKDYPSLIEGLDNQKVEFVACGGS 253



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
           +G   TPK I+  +  ++  V  G    + L+ DG  F +       + S         L
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEY------DNYSMKHLRFENVL 135

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
              +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195

Query: 530 ICAGSLFSIAYTV 542
           I AG   S+A ++
Sbjct: 196 ISAGEAHSMALSM 208



 Score = 44.7 bits (104), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K     +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLI 237

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           + L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGY 295

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G T  Q  P
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339


>gi|449468281|ref|XP_004151850.1| PREDICTED: uncharacterized protein LOC101206334 [Cucumis sativus]
          Length = 1085

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 30/314 (9%)

Query: 208 KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRV-P 263
           KC  P +  L   +  +  G+ C+   +    L  +G G    LG  N  IQ LP ++  
Sbjct: 129 KCRTP-IDLLSGPVLQVVGGEPCSVATE----LFSWGSGTNYQLGTGNEHIQKLPCKIDS 183

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH------GNTLSQRRPKLIMG 317
           L  +  S+ +   S+ H + V++ G+VY+WG G  G+LGH          +   P+ ++ 
Sbjct: 184 LHGS--SIKLVSASKFHSVAVSACGQVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIF 241

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGA 376
           GL  +RV  ++A   H+   TE G ++TWG    G+LG+  + ++ TP  V+ L S +  
Sbjct: 242 GLGSRRVRAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVD 301

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TPKVIEALRKFRVRKVCAGT 434
           V+    HT V+S+ G  +++ G    G+LG+  +   +  TP+V+E L+     +V A  
Sbjct: 302 VAAANKHTAVVSESGE-IFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFARVAAAK 360

Query: 435 SFSVALTWDGLVFWWGLGL---------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
             ++ L  DG V+ WG  L         R+   S +TP+    +    +V+++ G  H +
Sbjct: 361 FHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKFHRMKRLHVVNIAAGMVHSM 420

Query: 486 ALSQYNEVYAWGSN 499
           AL+    V+ W S+
Sbjct: 421 ALTDDGAVFYWDSS 434



 Score = 81.3 bits (199), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 93/197 (47%), Gaps = 22/197 (11%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGE 381
           V QV  G   S A      L++WG G + +LG G+   +  P  +  L  S +  VS  +
Sbjct: 141 VLQVVGGEPCSVATE----LFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASK 196

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHED------TGKVTTPK-VIEALRKFRVRKVCAGT 434
            H++ +S  G  V++ G G  G+LGH D         V TP+ VI  L   RVR + A  
Sbjct: 197 FHSVAVSACGQ-VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAK 255

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             +V  T  G VF WG      LG  S      TP  V+ L S +IVDV+  + H   +S
Sbjct: 256 HHTVIATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLRS-KIVDVAAANKHTAVVS 313

Query: 489 QYNEVYAWGSNTMGQCG 505
           +  E++ WG N  GQ G
Sbjct: 314 ESGEIFTWGCNREGQLG 330



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 81/266 (30%)

Query: 186 AHSKVYTWG----CNLHHQILDEVRGKCS----RPRLQSLPSN-IRHIEAGQFCTFLLDS 236
           A  +VYTWG      L H   D   G+ +    R  +  L S  +R I A +  T +   
Sbjct: 204 ACGQVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVIATE 263

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G +  +G   +G LG  +   QP P+RV  L + IV ++    +  H   V+  GE+++
Sbjct: 264 GGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVDVA---AANKHTAVVSESGEIFT 320

Query: 293 WGVGEHGKLGHG--NTLSQRRPKL-----------------------IMGGLY--GKR-- 323
           WG    G+LG+G  N+ S   P++                       + G +Y  G R  
Sbjct: 321 WGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLV 380

Query: 324 ----------------------------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
                                       V  ++AG  HS A+T+DG ++ W   D     
Sbjct: 381 TPRRVVIARNLKKSGNTPLKFHRMKRLHVVNIAAGMVHSMALTDDGAVFYWDSSD----- 435

Query: 356 HGDLKSRHTPTLVTELSDVGAVSCGE 381
             DL+ +   +L     DV ++S G+
Sbjct: 436 -ADLRCQQLYSLCGR--DVVSISAGK 458



 Score = 47.8 bits (112), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 60/282 (21%)

Query: 181 TDISVAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           T I+    +V+TWG N   Q+    V  + +  R+ SL S I  + A    T ++  +G 
Sbjct: 258 TVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVDVAAANKHTAVVSESGE 317

Query: 240 LLVYG---KGWLGL--ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +  +G   +G LG   +N+     P+ V      V   V+  ++ H + +  +GEVY+WG
Sbjct: 318 IFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFARVA-AAKFHTICLGVDGEVYTWG 376

Query: 295 ----------VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
                     +  + K      L   R K +        V  ++AG  HS A+T+DG ++
Sbjct: 377 HRLVTPRRVVIARNLKKSGNTPLKFHRMKRL-------HVVNIAAGMVHSMALTDDGAVF 429

Query: 345 TWGEGDH-----------GR---------------LGHGDL------KSRHTPTLVTELS 372
            W   D            GR                  GD+        +  P   T L 
Sbjct: 430 YWDSSDADLRCQQLYSLCGRDVVSISAGKYWIAAVTSIGDVFMWDGKNGKDKPPAATRLH 489

Query: 373 DVG---AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            +    +VS GE+H L++    H  + +    + K  H  +G
Sbjct: 490 GIKRATSVSVGETHLLIVGSLYHPAYHVNGNKISK-NHSSSG 530


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 165/351 (47%), Gaps = 40/351 (11%)

Query: 214 LQSLPSNIR-HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIV 269
           L S P+ I   +  G   T LL   G +  +G    G LG   TT +P+P +V   + I 
Sbjct: 134 LSSSPTCIAPAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPVPVQVGGLSGIR 193

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
           +++    S  H L V  +G V++WG+   G+LG G T  +  P  + G    KRV   +A
Sbjct: 194 AVA---ASSDHSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLSSIKRV---AA 247

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSC------GESH 383
           G  +S AV  DG ++ WG    G+LG G    R TP  V  LS+V  VS       G +H
Sbjct: 248 GDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGRVKGLSEVVEVSAAKYSLLGSAH 307

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF------- 436
            L +  DG TVW+ G+   G+LG   T    TP  +  L    V+ +  G SF       
Sbjct: 308 VLAVRGDG-TVWAWGNNGSGQLGDGTTTDRLTPVQVSELDG--VKAIAVGNSFPLSNSNG 364

Query: 437 --SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             S+A+  DG V+ WG      LG   ++IS   P  V  LS   I  VS    H LA+ 
Sbjct: 365 SYSLAVRGDGTVWAWGSNSTGQLG-DGTTISRSRPAQVNALSG--ITAVSASSDHALAMR 421

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               V++WG NT G+ G +  ++ +  P +V GL    VR + AG   S++
Sbjct: 422 DDGTVWSWGKNTNGKLGDETTAHRL-IPVQVHGLS--GVRSVAAGESHSVS 469



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 154/340 (45%), Gaps = 34/340 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N + Q+ D        P      S IR + A    +  +   G +  +G    G
Sbjct: 161 VWAWGPNDYGQLGDGTTTNRPVPVQVGGLSGIRAVAASSDHSLAVRDDGTVWAWGINSSG 220

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   T  +  P +V   A + S+      + + L V  +G V++WG+   G+LG G T
Sbjct: 221 QLGDGTTNDRLTPVQV---AGLSSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTT 277

Query: 307 LSQRRPKLIMGGLYGKRVTQVSA------GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
             +  P  + G      V +VSA      G +H  AV  DG ++ WG    G+LG G   
Sbjct: 278 TDRLTPGRVKGL---SEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTT 334

Query: 361 SRHTPTLVTELSDVGAVSCGE---------SHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            R TP  V+EL  V A++ G          S++L +  DG TVW+ GS + G+LG   T 
Sbjct: 335 DRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDG-TVWAWGSNSTGQLGDGTTI 393

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---GLRSSSISFH--TPVLV 466
             + P  + AL    +  V A +  ++A+  DG V+ WG    G      + H   PV V
Sbjct: 394 SRSRPAQVNALSG--ITAVSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQV 451

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            GLS   +  V+ G+SH +++ +  + +AWG   MG  G 
Sbjct: 452 HGLSG--VRSVAAGESHSVSVREDGKAWAWGYRGMGLLGD 489



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 33/331 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           ++ WG +    + D   G  + P   S+  +++ + AG   +  + + G L  +G    G
Sbjct: 526 LWVWGSSSLGDLGDGSTG--AHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIG 583

Query: 247 WLGLANTT--IQPLPKRVPLE---AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            LG  +TT  + P+P    LE    A  S SVS       L + S+G V++WG+   G+L
Sbjct: 584 QLGDGSTTNRLTPVPVN-GLENVVGAAASFSVS-------LALRSDGTVWAWGLNSVGQL 635

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+T+++  P  + GGL    +  V+    HS A+  DG ++ WG    G+LG G   +
Sbjct: 636 GDGSTINRSTPGPV-GGLV--HIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTN 692

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           +  P  V+ LS V         +  + +D  TVW+ G    G+LG   T    TP ++  
Sbjct: 693 QPKPVQVSGLSGV-KAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSG 751

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
           L    V+ + +G    +AL  DG V+ WG      LG   +     TPV V GLS  +++
Sbjct: 752 LSG--VKALASGNHHFLALRNDGTVWAWGDNYYSQLG-DGTRTQRSTPVQVRGLSDVKLI 808

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
             + G++H +A+ +   V+ WG NT GQ G 
Sbjct: 809 --AAGENHSMAVRKDGTVWTWGLNTSGQLGN 837



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 166/405 (40%), Gaps = 68/405 (16%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V++WG N + ++ DE       P      S +R + AG+  +  +   G    +G   +G
Sbjct: 426 VWSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSVAAGESHSVSVREDGKAWAWGYRGMG 485

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAH-VLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
           L       L   VP++   ++ +    S  +  L V  +  ++ WG    G LG G+T +
Sbjct: 486 LLGDGAMFL-SFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLGDLGDGSTGA 544

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
              P  I+       V  V+AG+ +S AV  +G L+ WG    G+LG G   +R TP  V
Sbjct: 545 HPVPSSIL-----DDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPV 599

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
             L +V   +   S +L L  DG TVW+ G  ++G+LG   T   +TP  +  L    + 
Sbjct: 600 NGLENVVGAAASFSVSLALRSDG-TVWAWGLNSVGQLGDGSTINRSTPGPVGGL--VHIV 656

Query: 429 KVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLS------------ 470
            V      S+AL  DG V+ WG      LG   ++ +   PV V+GLS            
Sbjct: 657 GVATSGGHSLALRNDGTVWAWGGNHDGQLG-DGTTTNQPKPVQVSGLSGVKAVAAAIVSS 715

Query: 471 ----------------SHQIVD--------------------VSIGDSHVLALSQYNEVY 494
                           S Q+ D                    ++ G+ H LAL     V+
Sbjct: 716 AVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLSGVKALASGNHHFLALRNDGTVW 775

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           AWG N   Q G D        P +V GL D  V+ I AG   S+A
Sbjct: 776 AWGDNYYSQLG-DGTRTQRSTPVQVRGLSD--VKLIAAGENHSMA 817



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 122/271 (45%), Gaps = 13/271 (4%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHH 199
           L     ++I  LGD  ++N  T +       +        +S+A      V+ WG N   
Sbjct: 574 LWAWGSNSIGQLGDGSTTNRLTPVPVNGLENVVGAAASFSVSLALRSDGTVWAWGLNSVG 633

Query: 200 QILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQ 256
           Q+ D      S P       +I  +      +  L + G +  +G    G LG   TT Q
Sbjct: 634 QLGDGSTINRSTPGPVGGLVHIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQ 693

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           P P +V   + +  +     +      V   G V++WG    G+LG G T  +  P L+ 
Sbjct: 694 PKPVQV---SGLSGVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVS 750

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA 376
           G L G  V  +++G+ H  A+  DG ++ WG+  + +LG G    R TP  V  LSDV  
Sbjct: 751 G-LSG--VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQVRGLSDVKL 807

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           ++ GE+H++ + +DG TVW+ G    G+LG+
Sbjct: 808 IAAGENHSMAVRKDG-TVWTWGLNTSGQLGN 837



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 13/171 (7%)

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           AV+ G  HTL+L  DG TVW+ G  + G+LG   T     P  +  L    +R V A + 
Sbjct: 144 AVAVGTQHTLLLRPDG-TVWAWGPNDYGQLGDGTTTNRPVPVQVGGLSG--IRAVAASSD 200

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            S+A+  DG V+ WG      LG  +++    TPV V GLSS  I  V+ GD + LA+  
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRL-TPVQVAGLSS--IKRVAAGDGYSLAVHG 257

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
              V+AWG N+ GQ G    ++ +  P +V GL +V        SL   A+
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRL-TPGRVKGLSEVVEVSAAKYSLLGSAH 307



 Score = 61.2 bits (147), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 29/256 (11%)

Query: 115 LNLLEEVLRPATHYQVDL-IRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTP- 172
           +N LE V+  A  + V L +RS   V+   +    +++  LGD  + N      ST  P 
Sbjct: 599 VNGLENVVGAAASFSVSLALRSDGTVWAWGL----NSVGQLGDGSTINR-----STPGPV 649

Query: 173 -KLTYNIGDTDISVAHS-------KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHI 224
             L + +G    S  HS        V+ WG N   Q+ D       +P   S  S ++ +
Sbjct: 650 GGLVHIVG-VATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAV 708

Query: 225 EAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV 281
            A    + ++   G +  +G    G LG   TT +  P  V   + + +L+       H 
Sbjct: 709 AAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLSGVKALA---SGNHHF 765

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           L + ++G V++WG   + +LG G T +QR   + + GL    V  ++AG +HS AV +DG
Sbjct: 766 LALRNDGTVWAWGDNYYSQLGDG-TRTQRSTPVQVRGL--SDVKLIAAGENHSMAVRKDG 822

Query: 342 LLYTWGEGDHGRLGHG 357
            ++TWG    G+LG+G
Sbjct: 823 TVWTWGLNTSGQLGNG 838


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           R +S+     I  I  G + +  L   G L  +G+   G LG+          ++    A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            V L+     EAH + ++  G +YSWG  E G+LG G+T S+  P LI  GL  ++V  V
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIE-GLDNQKVEFV 248

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
           + G SHSA +T+DGLL+T+G G HG+LGH   ++   P LV EL    V  ++CG  HTL
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               D   V+S GSG  G+LG+  T     P
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+  P+L+  L +  V  V+CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+ +L+QDG  +++ G+G  G+LGH  T     P ++  L  +RV ++  G   ++A   
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 34/301 (11%)

Query: 221 IRHIEAG-QFCTFLLDSTGGLLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSLSV 273
           +R +E   Q C     S G L V  +G  G      LA +     PK + L   +   SV
Sbjct: 47  LRRVEVTRQLCC----SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSV 102

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            + +E H+L ++S+G+ + +       L   + L +            K++ Q++ G  H
Sbjct: 103 DQGAE-HMLILSSDGKPFEYDNYSMKHLRFESILQE------------KKIIQITCGDYH 149

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
           S A+++ G L+ WG+  HG+LG G    S  TP +V  L+ V    +S GE+H++ LS  
Sbjct: 150 SLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 209

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G+ ++S G    G+LG   T     P +IE L   +V  V  G S S  LT DGL+F +G
Sbjct: 210 GN-IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFG 268

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQC 504
            G       +S+ +   P LV  L  +++  ++ G  H LA +S   +V+++GS   GQ 
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQL 328

Query: 505 G 505
           G
Sbjct: 329 G 329



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212

Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 271 KHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 356 HGDLKSRHTP 365
           +G  + +  P
Sbjct: 330 NGGTRDQLMP 339



 Score = 63.2 bits (152), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS + GL++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNECGQLGLGH-TESKDDPSLIEGLDNQKVEFVACGGS 253



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
           +G   TPK I+  +  ++  V  G    + L+ DG  F         + S       + L
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF------EYDNYSMKHLRFESIL 135

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
              +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195

Query: 530 ICAGSLFSIAYTV 542
           I AG   S+A ++
Sbjct: 196 ISAGEAHSMALSM 208



 Score = 44.7 bits (104), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K     +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           + L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGY 295

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G T  Q  P
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           R +S+     I  I  G + +  L   G L  +G+   G LG+          ++    A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            V L+     EAH + ++  G +YSWG  E G+LG G+T S+  P LI  GL  ++V  V
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIE-GLDNQKVEFV 248

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
           + G SHSA +T+DGLL+T+G G HG+LGH   ++   P LV EL    V  ++CG  HTL
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               D   V+S GSG  G+LG+  T     P
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+  P+L+  L +  V  V+CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+ +L+QDG  +++ G+G  G+LGH  T     P ++  L  +RV ++  G   ++A   
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 34/301 (11%)

Query: 221 IRHIEAG-QFCTFLLDSTGGLLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSLSV 273
           +R +E   Q C     S G L V  +G  G      LA +     PK + L   +   SV
Sbjct: 47  LRRVEVTRQLCC----SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSV 102

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            + +E H+L ++S+G+ + +       L   + L +            K++ Q++ G  H
Sbjct: 103 DQGAE-HMLILSSDGKPFEYDNYSMKHLRFESILQE------------KKIIQITCGDYH 149

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
           S A+++ G L+ WG+  HG+LG G    S  TP +V  L+ V    +S GE+H++ LS  
Sbjct: 150 SLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 209

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G+ ++S G    G+LG   T     P +IE L   +V  V  G S S  LT DGL+F +G
Sbjct: 210 GN-IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFG 268

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQC 504
            G       +S+ +   P LV  L  +++  ++ G  H LA +S   +V+++GS   GQ 
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQL 328

Query: 505 G 505
           G
Sbjct: 329 G 329



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212

Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 271 KHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 356 HGDLKSRHTP 365
           +G  + +  P
Sbjct: 330 NGGTRDQLMP 339



 Score = 63.2 bits (152), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS + GL++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNECGQLGLGH-TESKDDPSLIEGLDNQKVEFVACGGS 253



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
           +G   TPK I+  +  ++  V  G    + L+ DG  F         + S       + L
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF------EYDNYSMKHLRFESIL 135

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
              +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195

Query: 530 ICAGSLFSIAYTV 542
           I AG   S+A ++
Sbjct: 196 ISAGEAHSMALSM 208



 Score = 44.7 bits (104), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K     +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           + L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGY 295

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G T  Q  P
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 139/292 (47%), Gaps = 38/292 (13%)

Query: 242 VYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +Y  GW     LG+ N+  Q  P+ VP++  +     S  S A    +   G++Y+WG  
Sbjct: 32  LYAWGWNNFGQLGIGNSISQYSPQLVPIQDVLFVACKSSVSAA----IDKSGKLYTWGRS 87

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           + G LG+G   +   P L+   L       V+ G+ H AA+T DG LYTWG  DHG+LGH
Sbjct: 88  KFGLLGNGQVENINVPSLVQC-LKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGH 146

Query: 357 G-----------------DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
                             +L S   P LV     V  V+ G+  T++LS+DG+ V+S+G 
Sbjct: 147 SFDNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGN-VYSVGL 205

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G LG++ T  V  P   +      + ++ +GT FSVAL  DG +F WG      LG 
Sbjct: 206 NKKGILGYQ-TKNVDEPTFKQIPDLKNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGT 264

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            S S+   TP  + GL   +I   S G+  + ALS    +Y WG    GQ G
Sbjct: 265 PSPSV-VQTPQQIKGLP--KIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLG 313



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 41/298 (13%)

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
           L+ A +  SV+  S      V S+ ++Y+WG    G+LG GN++SQ  P+L+      + 
Sbjct: 10  LKIAFIGSSVTFTSS----FVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVP----IQD 61

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGE 381
           V  V+   S SAA+ + G LYTWG    G LG+G +++ + P+LV  L   D   V+CG 
Sbjct: 62  VLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACGN 121

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGH-----------------EDTGKVTTPKVIEALRK 424
            H   ++ DG  +++ G+ + GKLGH                 ++ G    P++++    
Sbjct: 122 YHMAAITTDGQ-LYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQL--N 178

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
           F+V++V  G  F++ L+ DG V+  G      LG ++ ++   T   +  L +  IV + 
Sbjct: 179 FKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDEPTFKQIPDLKN--IVQID 236

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
            G    +AL     ++AWGSN  GQ G  + S  V  P ++ GL    ++Q   G  F
Sbjct: 237 SGTDFSVALDSDGNMFAWGSNYFGQLGTPSPS-VVQTPQQIKGLPK--IKQFSCGEQF 291



 Score = 77.4 bits (189), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 30/275 (10%)

Query: 188 SKVYTWG----CNLHHQILDEVR-------------GKCSRPRLQSLPSNIRHIEAGQFC 230
            ++YTWG      L H   +  +             G    P L  L   ++ +  G   
Sbjct: 131 GQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQF 190

Query: 231 TFLLDSTGGLLVYG---KGWLGLANTTI-QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTS 286
           T +L   G +   G   KG LG     + +P  K++P    IV +          + + S
Sbjct: 191 TIILSEDGNVYSVGLNKKGILGYQTKNVDEPTFKQIPDLKNIVQID---SGTDFSVALDS 247

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           +G +++WG    G+LG  +    + P+ I G     ++ Q S G     A++ DG+LYTW
Sbjct: 248 DGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGL---PKIKQFSCGEQFIGALSTDGVLYTW 304

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G G  G+LG    +   TP  +    ++  VSCG++H  ++S++   ++  G G  G+LG
Sbjct: 305 GFGGDGQLGTPSKQDIPTPHKIQFDQNIDKVSCGQAHVGIVSKN--KLYMHGRGKEGQLG 362

Query: 407 H-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              +T    + +    L    V K+  G S S A+
Sbjct: 363 RGSETESPNSSRYSPLLVMENVIKIACGGSHSFAV 397


>gi|449484006|ref|XP_004156756.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206334
           [Cucumis sativus]
          Length = 1084

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 30/314 (9%)

Query: 208 KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRV-P 263
           KC  P +  L   +  +  G+ C+   +    L  +G G    LG  N  IQ LP ++  
Sbjct: 129 KCRTP-IDLLSGPVLQVVGGEPCSVATE----LFSWGSGTNYQLGTGNEHIQKLPCKIDS 183

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH------GNTLSQRRPKLIMG 317
           L  +  S+ +   S+ H + V++ G+VY+WG G  G+LGH          +   P+ ++ 
Sbjct: 184 LHGS--SIKLVSASKFHSVAVSACGQVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIF 241

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGA 376
           GL  +RV  ++A   H+   TE G ++TWG    G+LG+  + ++ TP  V+ L S +  
Sbjct: 242 GLGSRRVRAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVD 301

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TPKVIEALRKFRVRKVCAGT 434
           V+    HT V+S+ G  +++ G    G+LG+  +   +  TP+V+E L+     +V A  
Sbjct: 302 VAAANKHTAVVSESGE-IFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFARVAAAK 360

Query: 435 SFSVALTWDGLVFWWGLGL---------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
             ++ L  DG V+ WG  L         R+   S +TP+    +    +V+++ G  H +
Sbjct: 361 FHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKFHRMKRLHVVNIAAGMVHSM 420

Query: 486 ALSQYNEVYAWGSN 499
           AL+    V+ W S+
Sbjct: 421 ALTDDGAVFYWDSS 434



 Score = 81.3 bits (199), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 93/197 (47%), Gaps = 22/197 (11%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGE 381
           V QV  G   S A      L++WG G + +LG G+   +  P  +  L  S +  VS  +
Sbjct: 141 VLQVVGGEPCSVATE----LFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASK 196

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHED------TGKVTTPK-VIEALRKFRVRKVCAGT 434
            H++ +S  G  V++ G G  G+LGH D         V TP+ VI  L   RVR + A  
Sbjct: 197 FHSVAVSACGQ-VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAK 255

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             +V  T  G VF WG      LG  S      TP  V+ L S +IVDV+  + H   +S
Sbjct: 256 HHTVIATEGGEVFTWGSNREGQLGYTSVDTQ-PTPRRVSSLRS-KIVDVAAANKHTAVVS 313

Query: 489 QYNEVYAWGSNTMGQCG 505
           +  E++ WG N  GQ G
Sbjct: 314 ESGEIFTWGCNREGQLG 330



 Score = 55.8 bits (133), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 81/266 (30%)

Query: 186 AHSKVYTWGCN----LHHQILDEVRGKCS----RPRLQSLPSN-IRHIEAGQFCTFLLDS 236
           A  +VYTWG      L H   D   G+ +    R  +  L S  +R I A +  T +   
Sbjct: 204 ACGQVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVIATE 263

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G +  +G   +G LG  +   QP P+RV  L + IV ++ +     H   V+  GE+++
Sbjct: 264 GGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVDVAAA---NKHTAVVSESGEIFT 320

Query: 293 WGVGEHGKLGHG--NTLSQRRPKL-----------------------IMGGLY--GKR-- 323
           WG    G+LG+G  N+ S   P++                       + G +Y  G R  
Sbjct: 321 WGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLV 380

Query: 324 ----------------------------VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
                                       V  ++AG  HS A+T+DG ++ W   D     
Sbjct: 381 TPRRVVIARNLKKSGNTPLKFHRMKRLHVVNIAAGMVHSMALTDDGAVFYWDSSD----- 435

Query: 356 HGDLKSRHTPTLVTELSDVGAVSCGE 381
             DL+ +   +L     DV ++S G+
Sbjct: 436 -ADLRCQQLYSLCGR--DVVSISAGK 458



 Score = 47.8 bits (112), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 60/282 (21%)

Query: 181 TDISVAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           T I+    +V+TWG N   Q+    V  + +  R+ SL S I  + A    T ++  +G 
Sbjct: 258 TVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSKIVDVAAANKHTAVVSESGE 317

Query: 240 LLVYG---KGWLGL--ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +  +G   +G LG   +N+     P+ V      V   V+  ++ H + +  +GEVY+WG
Sbjct: 318 IFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFARVA-AAKFHTICLGVDGEVYTWG 376

Query: 295 ----------VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
                     +  + K      L   R K +        V  ++AG  HS A+T+DG ++
Sbjct: 377 HRLVTPRRVVIARNLKKSGNTPLKFHRMKRL-------HVVNIAAGMVHSMALTDDGAVF 429

Query: 345 TWGEGDH-----------GR---------------LGHGDL------KSRHTPTLVTELS 372
            W   D            GR                  GD+        +  P   T L 
Sbjct: 430 YWDSSDADLRCQQLYSLCGRDVVSISAGKYWIAAVTSIGDVFMWDGKNGKDKPPAATRLH 489

Query: 373 DVG---AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            +    +VS GE+H L++    H  + +    + K  H  +G
Sbjct: 490 GIKRATSVSVGETHLLIVGSLYHPAYHVNGNKISK-NHSSSG 530


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 171/387 (44%), Gaps = 38/387 (9%)

Query: 157 RKSSNSNTDIDSTSTPKLTYNIGDTDISVA--HSKVYTWGCNLHHQILDEVRGKCSRPRL 214
           +  S S+ D+  TSTP+     G   I+    + ++YTWG     +  D V+  C   R+
Sbjct: 431 KSDSISSNDLLFTSTPRARIACGRNHIAFVTNNKELYTWGKECGGR-KDNVQNTCLPMRM 489

Query: 215 QSLPSN---IRHIEAGQFCTFLLDSTG----GLLVYGKGWLGLANTTIQPLPKRVPLEAA 267
           ++L +    +  +  G+F T  L   G    G   YG+  +G   T  +P+         
Sbjct: 490 ENLHNQGIQVVSVACGEFHTIALCEEGVYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQ 549

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           IVS+    C   H L +TS+ +VYSWG G HG+LG  +  +Q  PK I   L   +V Q 
Sbjct: 550 IVSVV---CGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQI-DLLDSHKVIQA 605

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTL 385
           +AG++HSA +T    +YT+G   +G+LG G    +  P LV  L+   +  +SCG   T+
Sbjct: 606 AAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETI 665

Query: 386 VLSQDG---------HTVWSMGSGNLGKLGH------EDTGKVTTPKVIEALRKFRVRKV 430
            +S+D          H  +        K G       +D      P+ ++   +  + ++
Sbjct: 666 AISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQI 725

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
             G    + LT    V+ WG      LG   + I    P LV  L    I+ V++G    
Sbjct: 726 FCGNWHYIILTSVNQVYTWGYNDCGQLG-HYNKIDQSAPRLVKALIRRAIIGVAVGAEFS 784

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSN 511
           +A    + + AWG N  G+ G +N  N
Sbjct: 785 VAFDADDNIMAWGRNDEGKIGIENEGN 811



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 18/167 (10%)

Query: 377 VSCGESHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTT-PKVIEAL--RKFRVRKVCA 432
           ++CG +H   ++ +     W    G     G +D  + T  P  +E L  +  +V  V  
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECG-----GRKDNVQNTCLPMRMENLHNQGIQVVSVAC 504

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           G   ++AL  +G V+ WG      LG+  +   +  PVL+T +SS QIV V  G  H LA
Sbjct: 505 GEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYR-PVLITHISSKQIVSVVCGAYHTLA 562

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           ++   +VY+WG    GQ G  +  N +  P ++  L+   V Q  AG
Sbjct: 563 ITSDYKVYSWGWGVHGQLGLKSVENQL-TPKQIDLLDSHKVIQAAAG 608


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           R +S+     I  I  G + +  L   G L  +G+   G LG+          ++    A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            V L+     EAH + ++  G +YSWG  E G+LG G+T S+  P LI  GL  ++V  V
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI-EGLDNQKVEFV 248

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTL 385
           + G SHSA +T+DGLL+T+G G HG+LGH   ++   P LV EL    V  ++CG  HTL
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               D   V+S GSG  G+LG+  T     P
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+  P+L+  L +  V  V+CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+ +L+QDG  +++ G+G  G+LGH  T     P ++  L  +RV ++  G   ++A   
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 34/301 (11%)

Query: 221 IRHIEAG-QFCTFLLDSTGGLLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSLSV 273
           +R +E   Q C     S G L V  +G  G      LA +     PK + L   +   SV
Sbjct: 47  LRRVEVTRQLCC----SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSV 102

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            + +E H+L ++S+G+ + +       L   + L +            K++ Q++ G  H
Sbjct: 103 DQGAE-HMLILSSDGKPFEYDNYSMKHLRFESILQE------------KKIIQITCGDYH 149

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
           S A+++ G L+ WG+  HG+LG G    S  TP +V  L+ V    +S GE+H++ LS  
Sbjct: 150 SLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 209

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G+ ++S G    G+LG   T     P +IE L   +V  V  G S S  LT DGL+F +G
Sbjct: 210 GN-IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFG 268

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQC 504
            G       +S+ +   P LV  L  +++  ++ G  H LA +S   +V+++GS   GQ 
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQL 328

Query: 505 G 505
           G
Sbjct: 329 G 329



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212

Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 271 KHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 356 HGDLKSRHTP 365
           +G  + +  P
Sbjct: 330 NGGTRDQLMP 339



 Score = 63.2 bits (152), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS + GL++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNECGQLGLGH-TESKDDPSLIEGLDNQKVEFVACGGS 253



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
           +G   TPK I+  +  ++  V  G    + L+ DG  F         + S       + L
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF------EYDNYSMKHLRFESIL 135

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
              +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195

Query: 530 ICAGSLFSIAYTV 542
           I AG   S+A ++
Sbjct: 196 ISAGEAHSMALSM 208



 Score = 44.7 bits (104), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K     +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           + L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGY 295

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G T  Q  P
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 17/298 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + S+G V S G    G+LG   T    +P+ I   L    V  VS G  HS AV
Sbjct: 32  EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLHVALVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG    G+LG G+ K +   P  +  L+ +    V+CG  H++ LS+DG  V
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G+ + G+LG  ++     +P+ + +L    + +V AG   S AL+  G  F WG   
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNN 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L   ++ +  + PV +  L +  +V +S G  H   L+Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
            D  +     P  V  +E + V QI  GS  ++AY +  +   +S    P C    PH
Sbjct: 270 HDPTAEK-RGPQLVERIEGL-VSQIDCGSDHTLAY-IYTTGQVVSFGRGPGCASRSPH 324



 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 150/301 (49%), Gaps = 29/301 (9%)

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLAN---TTIQPLPKRVPLE 265
           P L++L  ++  +  G+  +  +   G +  +G   +G LG+     TT   +PK++   
Sbjct: 70  PALETL--HVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF--IPKKIKTL 125

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRV 324
           A I  + V+ C   H + ++ +G+V+SWG   HG+LG G    SQ  P+ +   L G  +
Sbjct: 126 AGIKIIQVA-CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR-SLEGIPL 183

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---GHGDLKSRHTPTLVTELSDVGAV--SC 379
            QV+AG  HS A++  G  + WG  + G+L   G+     R+ P  +  L  +G V  SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT VL+QDG  V++ G  + G+LGH+ T +   P+++E +    V ++  G+  ++A
Sbjct: 244 GYKHTAVLTQDG-KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLA 301

Query: 440 LTW-DGLVFWWGLGLRSSSISFHTPVLVTG------LSSHQIVDVSIGDSHVLALSQYNE 492
             +  G V  +G G   +S S H   L         +S+  + DV +   H+ A +  N 
Sbjct: 302 YIYTTGQVVSFGRGPGCASRSPHPGALAESSDISCLVSAKDLADVQV--KHIFAGTYANF 359

Query: 493 V 493
           V
Sbjct: 360 V 360



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 106/234 (45%), Gaps = 14/234 (5%)

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           R + +  G  G  + Q ++G  HS  +  DG + + G+   G+LG         P  +  
Sbjct: 14  RERQVCAG--GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPA 71

Query: 371 LSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRV 427
           L    V  VSCG+ H+L +   G  V++ G+ + G+LG  +  + T  PK I+ L   ++
Sbjct: 72  LETLHVALVSCGKEHSLAVCHKGR-VFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKI 130

Query: 428 RKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
            +V  G   SVAL+ DG VF WG      LGL     S  +P  V  L    +  V+ G 
Sbjct: 131 IQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 190

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAG 533
            H  ALS     + WGSN  GQ      + PV   +P  +  L+ + V  I  G
Sbjct: 191 HHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  DG TV S G  + G+LG + T +   P+ I AL    V  V  G   
Sbjct: 28  AASGEHHSLLLLSDG-TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEH 86

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+A+   G VF WG      LG+     +   P  +  L+  +I+ V+ G  H +ALS+ 
Sbjct: 87  SLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSED 146

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V++WG+N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 24/240 (10%)

Query: 189 KVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G    +G 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 246 ---GWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHG 299
              G L L+     P+ +  P+   A+ +L V    C   H   +T +G+V+++G   +G
Sbjct: 208 NNAGQLALSGNN-APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 300 KLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +LGH  T  +R P+L+  + GL    V+Q+  G  H+ A      +YT G+      G G
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGL----VSQIDCGSDHTLA-----YIYTTGQVVSFGRGPG 317

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
                  P  + E SD   +SC  S   +       +++    N      +DT   + P+
Sbjct: 318 CASRSPHPGALAESSD---ISCLVSAKDLADVQVKHIFAGTYANFVTTSQKDTSSTSVPR 374


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 18/263 (6%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  ++    +PK+V + +    +S+S  S  H+L  T +GE+++WG   + +LG+G T 
Sbjct: 69  LGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTN 128

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P L+   L  K+VT+V+ G  HS A+T+ G +Y WG  + G++G G   ++ TP  
Sbjct: 129 QGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRR 188

Query: 368 VTE-LSDVGAVS--CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           V+  L +  AVS  CG++ +L +  +G  V+  G    G+LG  + G   TP  + AL+ 
Sbjct: 189 VSSCLQNRVAVSIVCGQTSSLAVVDNGE-VYGWGYNGNGQLGLGNNGNQLTPCRLVALQG 247

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVD 476
             V+++ +G + S+ALT +GL++ WG         G +S+ +S   PV +      +IV+
Sbjct: 248 LCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS---PVQIM-TEKERIVE 303

Query: 477 VSIGDS-HV-LALSQYNEVYAWG 497
           ++   S H   A +Q  +VY WG
Sbjct: 304 IAACHSTHTSAAKTQSGQVYMWG 326



 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 18/248 (7%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSA 335
           S    + +T++ EVY+ G+     LG G++ S   PK +   L G++V  +S G   H  
Sbjct: 45  SANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVPKKV-DILSGRKVVSLSYGSGPHIL 103

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGH 392
             TEDG L+ WG   + +LG+G       P LV+       V  V+CG  H++ L+  G 
Sbjct: 104 LATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGE 163

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR-KVCAGTSFSVALTWDGLVFWWG- 450
            V++ G  N G++G   T    TP+ + +  + RV   +  G + S+A+  +G V+ WG 
Sbjct: 164 -VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGY 222

Query: 451 -------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
                  LG   + ++    V + GL   QIV    G +H LAL+    +YAWG+NT GQ
Sbjct: 223 NGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVS---GYAHSLALTDEGLLYAWGANTYGQ 279

Query: 504 CGQDNFSN 511
            G  N SN
Sbjct: 280 LGTGNKSN 287



 Score = 91.7 bits (226), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 38/305 (12%)

Query: 232 FLLDSTGGLLVYG-KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEG 288
            L    G L  +G  G+  L N T       V + A +++  V++  C   H + +T  G
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSG 162

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EVY+WG    G++G G+T +Q  P+ +   L  +    +  G + S AV ++G +Y WG 
Sbjct: 163 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGY 222

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             +G+LG G+  ++ TP  +  L    V  +  G +H+L L+ +G  +++ G+   G+LG
Sbjct: 223 NGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEG-LLYAWGANTYGQLG 281

Query: 407 HEDTGKVTTPKVIEALRKFRVRKV--CAGTSFSVALTWDGLVFWWGLGLRSSSI------ 458
             +     +P  I    K R+ ++  C  T  S A T  G V+ WG   R  SI      
Sbjct: 282 TGNKSNQLSPVQIMT-EKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQSIVLPYLT 339

Query: 459 ----------SFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQCGQD 507
                      F TP ++  L       +S+G +HVLA +  +++ Y     T+ Q  + 
Sbjct: 340 HFACTDDVFACFATPSVMWRL-------LSVGMAHVLAEVPLHHDDYL----TVAQSLKK 388

Query: 508 NFSNP 512
            F NP
Sbjct: 389 EFDNP 393


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 126/253 (49%), Gaps = 17/253 (6%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           P P +   E  ++ ++V      H   + S G++YSWG+G +G+LGHGN      PK++ 
Sbjct: 21  PKPIKSLKEKGVIQVAVG---PQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLA 77

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--V 374
                    Q++ G +HSA +T+DG LY+WG G +G LG+G+   + TP LV  L D  V
Sbjct: 78  STKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERHDQWTPNLVLRLRDLVV 137

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             V+CG + T   +  G  ++S GSG  G LG  D      P ++    + R+ +V  G 
Sbjct: 138 SYVACGTNTTFACTGGG-LLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGE 196

Query: 435 SFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQ--------IVDVSIGDSHVLA 486
              +ALT DG ++ WG G        HT  +   LS H+        IV +S G  H   
Sbjct: 197 HHCLALTEDGKLWGWGRGTGGCHGLGHTSEV---LSPHKLPMPEDRTIVSMSCGRWHSAY 253

Query: 487 LSQYNEVYAWGSN 499
           L+   +++ +GS 
Sbjct: 254 LTIRGDIFCFGSG 266



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 132/262 (50%), Gaps = 17/262 (6%)

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           SWG G +  LGHG+  +++ PK I   L  K V QV+ G  H +A+   G +Y+WG G +
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKS-LKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLN 59

Query: 352 GRLGHGDLKSRHTPTLVTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
           GRLGHG+++    P ++           ++CG +H+  L+QDG  ++S G G  G+LG+ 
Sbjct: 60  GRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDG-KLYSWGRGLNGELGNG 118

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISF 460
           +     TP ++  LR   V  V  GT+ + A T  GL+F WG        LG R   +  
Sbjct: 119 ERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLE- 177

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
             P LV      +I+ V+ G+ H LAL++  +++ WG  T G C     ++ V  P K+ 
Sbjct: 178 --PSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGT-GGCHGLGHTSEVLSPHKLP 234

Query: 521 GLEDVCVRQICAGSLFSIAYTV 542
             ED  +  +  G   S   T+
Sbjct: 235 MPEDRTIVSMSCGRWHSAYLTI 256



 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 112/230 (48%), Gaps = 8/230 (3%)

Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTV 284
           Q C+ L  S+G +  +G    G LG  N      PK +       +     C  AH   +
Sbjct: 40  QHCSALC-SSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYL 98

Query: 285 TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           T +G++YSWG G +G+LG+G    Q  P L++  L    V+ V+ G + + A T  GLL+
Sbjct: 99  TQDGKLYSWGRGLNGELGNGERHDQWTPNLVLR-LRDLVVSYVACGTNTTFACTGGGLLF 157

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           +WG G HG LG GD + R  P+LV   E   +  V+CGE H L L++DG  +W  G G  
Sbjct: 158 SWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDG-KLWGWGRGTG 216

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           G  G   T +V +P  +       +  +  G   S  LT  G +F +G G
Sbjct: 217 GCHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSG 266


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 132/263 (50%), Gaps = 24/263 (9%)

Query: 260 KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MG 317
           K VP +     LS +       + +T +G VY+ G   HG+LGHG+T+ +R PK++  + 
Sbjct: 214 KGVPCKQVAAGLSFT-------VFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD----LKSRHTPTLVTELSD 373
           G+    V Q++AG S++ AVT+DG ++++G G +  LGHG+    L+ R   +   +   
Sbjct: 267 GV--GPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIH 324

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V  +S G+ H + L   G  V++ G G  G LGH D    TTP+++ +L+     +VCA 
Sbjct: 325 VVRISAGDEHVVALDSSGF-VYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCAR 383

Query: 434 TSFSVALTWDGLVF---WWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
              +  L   G V+   W G G      R +S     P ++  L  H I  +S G  H +
Sbjct: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTV 443

Query: 486 ALSQYNEVYAWGSNTMGQCGQDN 508
           A+    +++ +G N   Q G D 
Sbjct: 444 AVXNKGQIFGFGDNERAQLGHDT 466



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 126/276 (45%), Gaps = 15/276 (5%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSA 335
           S  H   V   GEV++ G       GHG+T+    RP+L+   L G    QV+AG S + 
Sbjct: 171 SHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEA-LKGVPCKQVAAGLSFTV 229

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV---SCGESHTLVLSQDGH 392
            +T  G +YT G   HG+LGHGD   R TP +V  L  VG V   + G S+ + ++ DG 
Sbjct: 230 FLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDG- 288

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK--FRVRKVCAGTSFSVALTWDGLVFWWG 450
           TV S GSG+   LGH +      P+ I++ R+    V ++ AG    VAL   G V+ WG
Sbjct: 289 TVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWG 348

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G          I   TP +++ L SH  V V         L     VY +G    G  G
Sbjct: 349 KGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408

Query: 506 --QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                 S+ V +P  +  L    + QI  G   ++A
Sbjct: 409 FPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVA 444



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 14/252 (5%)

Query: 211 RPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           RPRL      +  + + AG   T  L   G +   G    G LG  +T  +  PK V L 
Sbjct: 206 RPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR-- 323
             +  +       ++ + VT +G V+S+G G +  LGHG   ++ RP+ I    + ++  
Sbjct: 266 EGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQS--FRRKTI 323

Query: 324 -VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGE 381
            V ++SAG  H  A+   G +YTWG+G  G LGHGD   + TP +++ L    AV  C  
Sbjct: 324 HVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCAR 383

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSV 438
                +  D  +V+  G    G LG  D G   KV  P ++++LR   + ++  G   +V
Sbjct: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTV 443

Query: 439 ALTWDGLVFWWG 450
           A+   G +F +G
Sbjct: 444 AVXNKGQIFGFG 455



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 130/280 (46%), Gaps = 46/280 (16%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-------RRPKLIMGGLYGKRVTQVSAGHS 332
           H L +  +  VYS G    G LGHG   +Q         P L         V QVSA H+
Sbjct: 122 HTLLI-KDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPL-------AHVAQVSASHN 173

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDV--GAVSCGESHTLVLSQ 389
           H+A V + G ++T G+      GHGD ++    P LV  L  V    V+ G S T+ L+ 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFW 448
            GH V++ G+   G+LGH DT    TPK++E L     V ++ AG S+++A+T DG V  
Sbjct: 234 KGH-VYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHS 292

Query: 449 WGLG-------------LRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           +G G             LR  +I SF    +        +V +S GD HV+AL     VY
Sbjct: 293 FGSGSNFCLGHGEQHNELRPRAIQSFRRKTI-------HVVRISAGDEHVVALDSSGFVY 345

Query: 495 AWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICA 532
            WG    G CG     + +D+  P  +  L+     Q+CA
Sbjct: 346 TWGK---GYCGALGHGDEIDKTTPEILSSLKSHLAVQVCA 382



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 22/207 (10%)

Query: 175 TYNIGDTDISVAHSKVYTWGCNL---HHQILDEVRGKCSRPR-LQSLPSNIRH---IEAG 227
           +Y +  TD    HS  +  G N    H +  +E+R     PR +QS      H   I AG
Sbjct: 279 SYAMAVTDDGTVHS--FGSGSNFCLGHGEQHNELR-----PRAIQSFRRKTIHVVRISAG 331

Query: 228 QFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAH-VLTV 284
                 LDS+G +  +GKG+ G      + + K  P  L +    L+V  C+       +
Sbjct: 332 DEHVVALDSSGFVYTWGKGYCGALGHGDE-IDKTTPEILSSLKSHLAVQVCARKRKTFVL 390

Query: 285 TSEGEVYSWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
              G VY +G    G LG    G +    RP  I+  L G  ++Q+S G  H+ AV   G
Sbjct: 391 VDTGSVYGFGWMGFGSLGFPDRGASDKVMRP-WILDSLRGHYISQISTGLYHTVAVXNKG 449

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLV 368
            ++ +G+ +  +LGH  L+    PT +
Sbjct: 450 QIFGFGDNERAQLGHDTLRGCPVPTEI 476


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 17/240 (7%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTE 339
           + +T++G+VY+ G   HG+LGHG+T+ +  PK++    GL    V QV+AG S++ AVT+
Sbjct: 221 VILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGL--APVVQVAAGASYTFAVTD 278

Query: 340 DGLLYTWGEGDHGRLGHGD----LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           DG +Y++G   +  LGHGD    L+ R   +       V  VS G+ H + L   G+ V+
Sbjct: 279 DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGY-VY 337

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLG 452
           + G G  G LGH D    T+P++I +L+     +VCA    +  LT +G VF   W G G
Sbjct: 338 TWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFG 397

Query: 453 L-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
                 R SS     P ++  L  H +  +S G  H +A++    V+ +G N   Q GQ+
Sbjct: 398 SLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQE 457



 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           + + +  G   T +L + G +   G    G LG  +T  +  PK V L   +  +     
Sbjct: 209 SCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAA 268

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSH 333
             ++   VT +G VYS+G   +  LGHG+   + RP+ I    + +R   V +VSAG  H
Sbjct: 269 GASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQS--FKRRNIHVVRVSAGDEH 326

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESH-TLVLSQDG 391
           + A+   G +YTWG G  G LGHGD   + +P L++ L S V    C     T VL+ +G
Sbjct: 327 AVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEG 386

Query: 392 HTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            +V++ G    G LG  D G   KV  P+V+++LR   V ++  G   +VA+T  G+VF 
Sbjct: 387 -SVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFG 445

Query: 449 WG 450
           +G
Sbjct: 446 FG 447



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 137/310 (44%), Gaps = 17/310 (5%)

Query: 246 GWLGLANTTIQPLP-KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G LG    T Q     RVP  +    +++S  S  H   VT  GEV++ G       GHG
Sbjct: 132 GVLGHGPDTTQCAAFSRVPFPSLSRVVNISA-SHNHAAFVTELGEVFTCGDNSSLCCGHG 190

Query: 305 NT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
               +  RP  I   L G    QV+ G S +  +T DG +YT G   HG+LGHGD   R 
Sbjct: 191 EVGRTIFRPTEIKA-LKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRA 249

Query: 364 TPTLV---TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           TP +V     L+ V  V+ G S+T  ++ DG TV+S GS     LGH D      P+ I+
Sbjct: 250 TPKIVELFEGLAPVVQVAAGASYTFAVTDDG-TVYSFGSCTNFCLGHGDQHDELRPRAIQ 308

Query: 421 AL--RKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQ 473
           +   R   V +V AG   +VAL   G V+ WG G              +P L++ L S  
Sbjct: 309 SFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQV 368

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQIC 531
            V V         L+    V+A+G    G  G      S+ V +P  +  L D  V QI 
Sbjct: 369 AVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQIS 428

Query: 532 AGSLFSIAYT 541
            G   ++A T
Sbjct: 429 TGLYHTVAVT 438



 Score = 99.0 bits (245), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 131/283 (46%), Gaps = 44/283 (15%)

Query: 290 VYSWGVGEHGKLGHGNTLSQ-----RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           VYS G    G LGHG   +Q     R P   +      RV  +SA H+H+A VTE G ++
Sbjct: 123 VYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSL-----SRVVNISASHNHAAFVTELGEVF 177

Query: 345 TWGEGDHGRLGHGDL-KSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGN 401
           T G+      GHG++ ++   PT +  L  +    V+ G S T++L+ DG  V++ GS  
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQ-VYTCGSNT 236

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISF 460
            G+LGH DT    TPK++E       V +V AG S++ A+T DG V+ +G     S  +F
Sbjct: 237 HGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFG-----SCTNF 291

Query: 461 -------HTPVLVTGLSSHQ-----IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                  H  +    + S +     +V VS GD H +AL     VY WG    G  G  +
Sbjct: 292 CLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGD 351

Query: 509 FSNPVDQPSKVVGLEDVCVRQICA-----------GSLFSIAY 540
             N    P  +  L+     Q+CA           GS+F+  +
Sbjct: 352 -ENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGW 393



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 22/194 (11%)

Query: 190 VYTWG-----CNLHHQILDEVRGKCSRPR-LQSLPSNIRHI---EAGQFCTFLLDSTGGL 240
           VY++G     C  H    DE+R     PR +QS      H+    AG      LD+ G +
Sbjct: 282 VYSFGSCTNFCLGHGDQHDELR-----PRAIQSFKRRNIHVVRVSAGDEHAVALDALGYV 336

Query: 241 LVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
             +G+G+   LG  +   +  P+ +    + V++ V    +     +T EG V+++G   
Sbjct: 337 YTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCA-RKRKTFVLTDEGSVFAFGWMG 395

Query: 298 HGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G LG    G++    RP+ ++  L    V+Q+S G  H+ AVT  G+++ +G+ +  +L
Sbjct: 396 FGSLGFPDRGSSDKVMRPR-VLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQL 454

Query: 355 GHGDLKSRHTPTLV 368
           G   ++    PT +
Sbjct: 455 GQEYIRGCLKPTEI 468


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 170/393 (43%), Gaps = 38/393 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVPLEAAIVSLSVSKC 276
           +++ I  G     L+   G +  +G+G  G     I      PK V     I + SV+ C
Sbjct: 301 DVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVA-C 359

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKL--GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E     +T  GEVY+WG    G       N+ S+  P+ + G L G  ++ V+ G  H+
Sbjct: 360 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 419

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL----- 387
           A V+  G L+T+G+G  G LGHG+L S   P  V  L+   V +V+CG  HT  +     
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMI 479

Query: 388 ------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                 S  G  +++ G G+ GKLGH D  +   P  +  L      +V  G   +V LT
Sbjct: 480 DRFKFKSAVG-KLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLT 538

Query: 442 WDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G  +       SS      ++   L    +  +S G  HV +L+    VY W
Sbjct: 539 NMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTW 598

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    GQ G  + S+  + P+ V  L D  V  I  GS F+ A  +   + +++S+    
Sbjct: 599 GKGAHGQLGLGD-SDDRNLPTFVEALGDKQVESIACGSNFTAAICL---HRSITSSDQSS 654

Query: 557 CVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
           C   + P  FT       +   C+  G Y  FC
Sbjct: 655 CYGCKLPFGFT------RKKHNCYHCGLY--FC 679



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 72/325 (22%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYG 244
           H ++++WG     ++  ++      P+L    + I  + +  G++ T  L   G +  +G
Sbjct: 318 HGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWG 377

Query: 245 KGWLGL-----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
               G       N+  + LP+++      +S+S   C E H   V++ G ++++G G  G
Sbjct: 378 DSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTFG 437

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-----------GLLYTWGE 348
            LGHGN +S  +PK +   L G  V  V+ G  H+AA+ +            G L+TWG+
Sbjct: 438 ALGHGNLISLSQPKEVES-LNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGD 496

Query: 349 GDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT------------- 393
           GD G+LGHGD + +  PT V  L   D   VSCG   T+ L+  G               
Sbjct: 497 GDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGN 556

Query: 394 --------------------------------------VWSMGSGNLGKLGHEDTGKVTT 415
                                                 V++ G G  G+LG  D+     
Sbjct: 557 LSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNL 616

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P  +EAL   +V  +  G++F+ A+
Sbjct: 617 PTFVEALGDKQVESIACGSNFTAAI 641



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           PK++E+     V+ +  G   +  +T  G +F WG G         ++    P LV  L+
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 350

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG---QCGQDNFSNPVDQPSKVVG-LEDVC 526
                 V+ G+    AL++  EVY WG +  G    C +++ S  +  P K+ G L+ + 
Sbjct: 351 GIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWL--PQKLSGPLKGIS 408

Query: 527 VRQICAG 533
           +  +  G
Sbjct: 409 ISNVACG 415


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 24/262 (9%)

Query: 260 KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MG 317
           K VP +     LS +       + +T +G VY+ G   HG+LGHG+T+ +R PK++  + 
Sbjct: 214 KGVPCKQVAAGLSFT-------VFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD----LKSRHTPTLVTELSD 373
           G+    V Q++AG S++ AVT+DG ++++G G +  LGHG+    L+ R   +   +   
Sbjct: 267 GV--GPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIH 324

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           V  +S G+ H + L   G  V++ G G  G LGH D    TTP+++ +L+     +VCA 
Sbjct: 325 VVRISAGDEHVVALDSSGF-VYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCAR 383

Query: 434 TSFSVALTWDGLVF---WWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
              +  L   G V+   W G G      R +S     P ++  L  H I  +S G  H +
Sbjct: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTV 443

Query: 486 ALSQYNEVYAWGSNTMGQCGQD 507
           A++   +++ +G N   Q G D
Sbjct: 444 AVNNKGQIFGFGDNERAQLGHD 465



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 126/276 (45%), Gaps = 15/276 (5%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSA 335
           S  H   V   GEV++ G       GHG+T+    RP+L+   L G    QV+AG S + 
Sbjct: 171 SHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEA-LKGVPCKQVAAGLSFTV 229

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV---SCGESHTLVLSQDGH 392
            +T  G +YT G   HG+LGHGD   R TP +V  L  VG V   + G S+ + ++ DG 
Sbjct: 230 FLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDG- 288

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK--FRVRKVCAGTSFSVALTWDGLVFWWG 450
           TV S GSG+   LGH +      P+ I++ R+    V ++ AG    VAL   G V+ WG
Sbjct: 289 TVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWG 348

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            G          I   TP +++ L SH  V V         L     VY +G    G  G
Sbjct: 349 KGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408

Query: 506 --QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                 S+ V +P  +  L    + QI  G   ++A
Sbjct: 409 FPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVA 444



 Score =  100 bits (249), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 14/252 (5%)

Query: 211 RPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
           RPRL      +  + + AG   T  L   G +   G    G LG  +T  +  PK V L 
Sbjct: 206 RPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR-- 323
             +  +       ++ + VT +G V+S+G G +  LGHG   ++ RP+ I    + ++  
Sbjct: 266 EGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQS--FRRKTI 323

Query: 324 -VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGE 381
            V ++SAG  H  A+   G +YTWG+G  G LGHGD   + TP +++ L    AV  C  
Sbjct: 324 HVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCAR 383

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSV 438
                +  D  +V+  G    G LG  D G   KV  P ++++LR   + ++  G   +V
Sbjct: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTV 443

Query: 439 ALTWDGLVFWWG 450
           A+   G +F +G
Sbjct: 444 AVNNKGQIFGFG 455



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 127/273 (46%), Gaps = 45/273 (16%)

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQ-------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           +  VYS G    G LGHG   +Q         P L         V QVSA H+H+A V +
Sbjct: 128 DSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPL-------AHVAQVSASHNHAAFVMQ 180

Query: 340 DGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWS 396
            G ++T G+      GHGD ++    P LV  L  V    V+ G S T+ L+  GH V++
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGH-VYT 239

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWGLG--- 452
            G+   G+LGH DT    TPK++E L     V ++ AG S+++A+T DG V  +G G   
Sbjct: 240 CGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF 299

Query: 453 ----------LRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
                     LR  +I SF    +        +V +S GD HV+AL     VY WG    
Sbjct: 300 CLGHGEQHNELRPRAIQSFRRKTI-------HVVRISAGDEHVVALDSSGFVYTWGK--- 349

Query: 502 GQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICA 532
           G CG     + +D+  P  +  L+     Q+CA
Sbjct: 350 GYCGALGHGDEIDKTTPEILSSLKSHLAVQVCA 382



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 25/220 (11%)

Query: 175 TYNIGDTDISVAHSKVYTWGCNL---HHQILDEVRGKCSRPR-LQSLPSNIRH---IEAG 227
           +Y +  TD    HS  +  G N    H +  +E+R     PR +QS      H   I AG
Sbjct: 279 SYAMAVTDDGTVHS--FGSGSNFCLGHGEQHNELR-----PRAIQSFRRKTIHVVRISAG 331

Query: 228 QFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAH-VLTV 284
                 LDS+G +  +GKG+ G      + + K  P  L +    L+V  C+       +
Sbjct: 332 DEHVVALDSSGFVYTWGKGYCGALGHGDE-IDKTTPEILSSLKSHLAVQVCARKRKTFVL 390

Query: 285 TSEGEVYSWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
              G VY +G    G LG    G +    RP  I+  L G  ++Q+S G  H+ AV   G
Sbjct: 391 VDTGSVYGFGWMGFGSLGFPDRGASDKVMRP-WILDSLRGHYISQISTGLYHTVAVNNKG 449

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPT--LVTELS-DVGAVS 378
            ++ +G+ +  +LGH  L+    PT   V E + D G VS
Sbjct: 450 QIFGFGDNERAQLGHDTLRGCPVPTEIFVQEATDDAGRVS 489


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 180/375 (48%), Gaps = 33/375 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           A +KV ++G N + Q+  E       PR  + PS++  + AG  C+  ++S G    +G 
Sbjct: 3   ATTKVVSFGLNFNGQLGYECYDN-KNPRSVNAPSDLISLHAGWNCSVAVNSEGTPYFWGT 61

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
               + G A   ++P P  +P  +    L+  +   A   T   +G  YS+G GE GKLG
Sbjct: 62  MPSKYDGKAKF-LEPSP--LPAISIGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGKLG 118

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG   +++ PK +   + GK VTQ+  G  HS  +T+ G +YT+G+G +G+LGHG  K  
Sbjct: 119 HGGAANEQHPKQLE--VQGK-VTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDL 175

Query: 363 HTP----TLVTELSDVGAVSCGESHTLVLSQDG--HTVWSMGSGNLGKLGHEDTGKVTTP 416
             P     LV     + ++  G   T  ++ DG  H+ W      LG     D   V  P
Sbjct: 176 DRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHS-WGRQGPWLGHAAQPD--HVKQP 232

Query: 417 KVIEALR-KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHT--PVLVT 467
           + +  L+ K ++ +V AG   ++ LT DG V+  G      LG +  ++   T  P+ +T
Sbjct: 233 QEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLG-QGKTVKKETANPMPIT 291

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VC 526
            L+++ I  V+ G+ H + L+    V  +GS + G+ G  +  N  D P  V G+ D  C
Sbjct: 292 SLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQ-DVPRTVQGVFDKAC 350

Query: 527 VRQICAGSLFSIAYT 541
              I AG   +I  T
Sbjct: 351 A--IAAGFEHTIVLT 363


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 17/298 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + S+G V S G    G+LG   T    +P+ I   L    V  VS G  HS AV
Sbjct: 32  EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG    G+LG G+ K +   P  +  L+ +    V+CG  H++ LS+DG  V
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G+ + G+LG  ++     +P+ + +L    + +V AG   S AL+  G  F WG   
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L   ++ +  + PV +  L +  +V +S G  H   L+Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
            D  +     P  V  +E + V QI  GS  ++AY +  +   +S    P C    PH
Sbjct: 270 HDPTAEK-RGPQLVERIEGL-VSQIDCGSDHTLAY-IYTTGQVVSFGRGPGCASRSPH 324



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 27/299 (9%)

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLAN---TTIQPLPKRVPLE 265
           P L++L  N+  +  G+  +  +   G +  +G   +G LG+     TT   +PK++   
Sbjct: 70  PALETL--NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF--IPKKIKTL 125

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRV 324
           A I  + V+ C   H + ++ +G+V+SWG   HG+LG G    SQ  P+ +   L G  +
Sbjct: 126 AGIKIIQVA-CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR-SLEGIPL 183

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---GHGDLKSRHTPTLVTELSDVGAV--SC 379
            QV+AG  HS A++  G  + WG    G+L   G+     R+ P  +  L  +G V  SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT VL+QDG  V++ G  + G+LGH+ T +   P+++E +    V ++  G+  ++A
Sbjct: 244 GYKHTAVLTQDG-KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLA 301

Query: 440 LTW-DGLVFWWGLGLRSSSISFHTPVLVTGL----SSHQIVDVSIGDSHVLALSQYNEV 493
             +  G V  +G G   +S S H     + +    S+  + DV +   H+ A +  N V
Sbjct: 302 YIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQV--KHIFAGTYANFV 358



 Score = 94.7 bits (234), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 17/238 (7%)

Query: 310 RRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           RRP   + +  G  G  + Q ++G  HS  +  DG + + G+   G+LG         P 
Sbjct: 10  RRPLRERQVCAG--GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE 67

Query: 367 LVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALR 423
            +  L   +V  VSCG+ H+L +   G  V++ G+ + G+LG  +  + T  PK I+ L 
Sbjct: 68  RIPALETLNVALVSCGKEHSLAVCHKGR-VFAWGAASEGQLGIGEFKETTFIPKKIKTLA 126

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
             ++ +V  G   SVAL+ DG VF WG      LGL     S  +P  V  L    +  V
Sbjct: 127 GIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV 186

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAG 533
           + G  H  ALS     + WGSN+ GQ      + PV   +P  +  L+ + V  I  G
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  DG TV S G  + G+LG + T +   P+ I AL    V  V  G   
Sbjct: 28  AASGEHHSLLLLSDG-TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+A+   G VF WG      LG+     +   P  +  L+  +I+ V+ G  H +ALS+ 
Sbjct: 87  SLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSED 146

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V++WG+N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 23/200 (11%)

Query: 189 KVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G    +G 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 246 ---GWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHG 299
              G L L+     P+ +  P+   A+ +L V    C   H   +T +G+V+++G   +G
Sbjct: 208 NSAGQLALSGNN-APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 300 KLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +LGH  T  +R P+L+  + GL    V+Q+  G  H+       L Y +  G     G G
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGL----VSQIDCGSDHT-------LAYIYTTGQVVSFGRG 315

Query: 358 DLKSRHTPTLVTELSDVGAV 377
              +  +P    E SD+  +
Sbjct: 316 PGCASRSPHPGAESSDISCL 335


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 116/232 (50%), Gaps = 28/232 (12%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           A+   VTS G VY+WG  E G+LG G+      P++I   L  K +  ++ G  H AA++
Sbjct: 240 AYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIR-SLSNKSIVNIACGRQHMAAIS 298

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLV----TELSDVGAVSCGESHTLVLSQDGHTV 394
           + G LYTWG G  G+LGHG LKS   P  V     +   +  V+ G + T+ +S++G  +
Sbjct: 299 KSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGE-L 357

Query: 395 WSMGSGNLGKLG---------------HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           +S G G  G+LG                +D  K + PK ++AL   +VRKV  G   ++A
Sbjct: 358 FSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIA 417

Query: 440 LTWDGLVFWWGLGLRSSSISFH------TPVLVTGLSSHQIVDVSIGDSHVL 485
           +T D  V+ WG G  S  + F        P  V  LS  +I  VS G+ H L
Sbjct: 418 VTTDNDVYTWGWG-SSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTL 468



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 27/231 (11%)

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           K+G     +Q  P L+  G    ++  +SAG ++SAAVT  G +YTWG  + G+LG GD 
Sbjct: 208 KVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDR 267

Query: 360 KSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
                P ++  LS+  +  ++CG  H   +S+ G  +++ G G  G+LGH     +  PK
Sbjct: 268 WYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSG-DLYTWGLGVFGQLGHGKLKSLLHPK 326

Query: 418 VI---EALRKFRVRKVCAGTSFSVALTWDGLVF--------------------WWGLGLR 454
            +   E  +K ++ +V  G +F++A++ +G +F                    W   G R
Sbjct: 327 KVLYFEQQQK-KIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDR 385

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              + +  P  V  L S ++  V+ G  H +A++  N+VY WG  + G  G
Sbjct: 386 DDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLG 436



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 24/231 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           VYTWG N   Q+    R     PR+    SN  I +I  G+     +  +G L  +G G 
Sbjct: 251 VYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGV 310

Query: 248 LG-LANTTIQPL--PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG- 302
            G L +  ++ L  PK+V   E     +          + V+  GE++S+G GE+G+LG 
Sbjct: 311 FGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGA 370

Query: 303 --------------HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
                           + L    PK +   L   +V +V+ GH H+ AVT D  +YTWG 
Sbjct: 371 TEDTQYMDWNNNGDRDDHLKYSLPKQVKA-LESVKVRKVACGHLHTIAVTTDNDVYTWGW 429

Query: 349 GDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSM 397
           G  G LG GD K +  P  V  LS  ++ +VS GE HTL++     T ++ 
Sbjct: 430 GSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIVRSSDTTTFAF 480



 Score = 73.9 bits (180), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V S+GVG+ G+LG      Q  P +I   L GKR+ Q++ G +HS AVTE G +Y+WG G
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQL-LKGKRIKQIACGEAHSLAVTEFGDVYSWGRG 61

Query: 350 DHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDG 391
             G LGH        P L+  L    +  V+CG  H+L L+  G
Sbjct: 62  KEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTG 105



 Score = 68.2 bits (165), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 7/91 (7%)

Query: 264 LEAAIVSLSVSK------CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           L+ A++ L   K      C EAH L VT  G+VYSWG G+ G+LGH        P LI  
Sbjct: 23  LDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAPPALIK- 81

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
            L  +R+ +V+ G+ HS A+T+ G +Y WG+
Sbjct: 82  ALEHERIVKVACGNYHSLALTDTGKVYQWGQ 112



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           ++G G  G+LG    K +  P ++  L    +  ++CGE+H+L +++ G  V+S G G  
Sbjct: 5   SFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFG-DVYSWGRGKE 63

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G+LGH        P +I+AL   R+ KV  G   S+ALT  G V+ WG
Sbjct: 64  GELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWG 111



 Score = 61.6 bits (148), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +V S G G  G+LG +       P VI+ L+  R++++  G + S+A+T  G V+ WG G
Sbjct: 2   SVISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRG 61

Query: 453 LRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
                          P L+  L   +IV V+ G+ H LAL+   +VY WG
Sbjct: 62  KEGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWG 111



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVV 520
           P ++  L   +I  ++ G++H LA++++ +VY+WG    G+ G  Q   + P   P+ + 
Sbjct: 25  PAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAP---PALIK 81

Query: 521 GLEDVCVRQICAGSLFSIAYT 541
            LE   + ++  G+  S+A T
Sbjct: 82  ALEHERIVKVACGNYHSLALT 102


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 143/308 (46%), Gaps = 27/308 (8%)

Query: 255 IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKL 314
           I P+P ++ L   I+ +     S  H+  VT E  VYSWG G  G+LGHG+ L  R    
Sbjct: 64  IPPIPFKIEL-PTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGD-LDPRNVPT 121

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--S 372
            +  L GK +T+V+ G   S   +++G++ T G+G  G LGHGD  S   P L+  L   
Sbjct: 122 SVEALKGKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSV 181

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
           DV ++SCG  H + +  DG  +++ G G  G+LG  D      P  +       +++V  
Sbjct: 182 DVTSISCGPEHVVGVGVDGE-IFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKC 240

Query: 433 GTSFSVALTWDGLVFWWG------LGL---------------RSSSISFHTPVLVTGLSS 471
           G   ++ LT  G +   G      LGL               ++       P  V  LS 
Sbjct: 241 GVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSK 300

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQIC 531
            +++D+ +G  H   + +   VY +G N  GQ G  N + P + P++V  + D  +  + 
Sbjct: 301 FRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGN-TKPREAPAQVQTMADKLISTVA 359

Query: 532 AGSLFSIA 539
            G  +++A
Sbjct: 360 CGEDYTVA 367



 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 24/213 (11%)

Query: 209 CSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVP 263
            SRPRL    L  ++  I  G      +   G +  +GKG    LGL +      P  V 
Sbjct: 169 ASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVT 228

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG---------------HGNTLS 308
           L   +    V KC     + +T  G + + G   + KLG                   + 
Sbjct: 229 LRDPVFIQEV-KCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVE 287

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
            R+    +  L   RV  +  G  HSA V E GL+Y +G+  HG+LG G+ K R  P  V
Sbjct: 288 GRKVPTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQV 347

Query: 369 TELSD--VGAVSCGESHTLVLSQDGHT-VWSMG 398
             ++D  +  V+CGE +T+  + D    +W  G
Sbjct: 348 QTMADKLISTVACGEDYTVAGAMDNFLYLWGKG 380


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 26/330 (7%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V+ WG     ++  +V      P R++SL    +R +      T  +  +G L ++G
Sbjct: 310 QGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369

Query: 245 KGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                +  +  Q L +++   L  ++  LSV+ C   H   VTS G+++++G G  G LG
Sbjct: 370 IDGGTIEQSGSQFLTRKISDVLGGSLTVLSVA-CGAWHTAIVTSSGQLFTYGSGTFGVLG 428

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED------------GLLYTWGEGD 350
           HG+  S  +PK +   L   +V  VS G  H+AA+ E             G L+TWG+GD
Sbjct: 429 HGSLESVTKPKEVES-LRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGD 487

Query: 351 HGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            GRLGH D K +  PT VTEL   D   VSCG + T+ LS  G TV++MGS   G+LG  
Sbjct: 488 KGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISG-TVYTMGSSIHGQLGCP 546

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTP 463
                +   V+  L +  V+ + +G+     LT  G V+ WG G+            ++P
Sbjct: 547 RAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSP 606

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           VLV  L    +  ++ G +   A+  + E+
Sbjct: 607 VLVEPLGDRLVESIACGLNLTAAICLHKEI 636



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 148/337 (43%), Gaps = 29/337 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           +++ I  G     L+   G +  +G G    LGL        PKRV     +   SV+ C
Sbjct: 293 DVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVA-C 351

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           S+     VT  GE+Y WG+        G+    R+   ++GG     V  V+ G  H+A 
Sbjct: 352 SDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSL--TVLSVACGAWHTAI 409

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGH-- 392
           VT  G L+T+G G  G LGHG L+S   P  V  L    V +VSCG  HT  + +  +  
Sbjct: 410 VTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDR 469

Query: 393 ---------TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
                     +++ G G+ G+LGH D+ +   P  +  L      KV  G + +VAL+  
Sbjct: 470 KFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSIS 529

Query: 444 GLVFWWGLGL-------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           G V+  G  +       R+   S +  V++  L+   + D++ G  HV  L+ +  VY W
Sbjct: 530 GTVYTMGSSIHGQLGCPRAKDKSVN--VVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTW 587

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           G    GQ G  +  +  + P  V  L D  V  I  G
Sbjct: 588 GKGMNGQLGLGDVRDR-NSPVLVEPLGDRLVESIACG 623



 Score = 44.7 bits (104), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G ++     +PK++E+   F V+ +  G   +  +T  G VF WG      LGL+  +I 
Sbjct: 273 GSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNID 331

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
              P  V  L    +  V+  D    A+++  E+Y WG
Sbjct: 332 IDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWG 369


>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1193

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 167/376 (44%), Gaps = 64/376 (17%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRL---------QSLPSNIRHIE--AGQFCTFLLDSTG 238
             Y WG N + ++ D    + + P L           LP +  +++  AG + +  + S G
Sbjct: 696  AYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDG 755

Query: 239  GLLVYGK---GWLGLANTTIQPLPKRV-----PLEAA--IVSLSVSKCSEAHVLTVTSEG 288
             +  +G    G LG  +T+   +P RV     P +A+  + ++ VS   + H L + S+G
Sbjct: 756  YVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVS-AGDYHSLALGSDG 814

Query: 289  EVYSWGVGEHGKLGHGNTLSQ------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
              Y+WG G +GKLG+ +  S       R P        G + TQVSAG +HS AV  DG 
Sbjct: 815  YAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSDGY 874

Query: 343  LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD---------VGAVSCGESHTLVLSQDGHT 393
             Y WG+G +G+LG+    S   P  V + +             +S G  H+L +  DG+ 
Sbjct: 875  AYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDGYA 934

Query: 394  -VWSMGSGNLGKLGHEDTGKVTTPKVI-------EALRKFRVRKVCAGTSFSVALTWDGL 445
              W +      +LG+  +   + P  +       +A +  +  +V AG   S+A+  DG 
Sbjct: 935  YAWGLND-YYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLAVDKDGN 993

Query: 446  VFWWG------LGLRSSSISFHTPVLVTGLSSHQ----------IVDVSIGDSHVLALSQ 489
             + WG      LG++ S   +  P+ V  LSS Q           V ++ GD H LA+  
Sbjct: 994  AYAWGDNDNGQLGIKGSGRPYPYPMKV--LSSAQSTSAAGPWMRAVQITAGDHHSLAIGT 1051

Query: 490  YNEVYAWGSNTMGQCG 505
                 AWGSN  G+ G
Sbjct: 1052 DGNTKAWGSNRDGRLG 1067



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 36/280 (12%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ------RRPKLIMGGLYGKRVTQVSA 329
              + + L V S+G VY+WG   +G+LG+ +T S       R P        G +  QVSA
Sbjct: 743  AGDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSA 802

Query: 330  GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD---------VGAVSCG 380
            G  HS A+  DG  Y WG+G +G+LG+    S + P  V +               VS G
Sbjct: 803  GDYHSLALGSDGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAG 862

Query: 381  ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI-------EALRKFRVRKVCAG 433
            ++H+L +  DG+  ++ G G+ GKLG+  T   + P  +       +  +  +  ++ AG
Sbjct: 863  QNHSLAVGSDGY-AYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAG 921

Query: 434  TSFSVALTWDGLVFWWGLG------LRSSSISFHTPVLVTGLSSH-------QIVDVSIG 480
               S+A+  DG  + WGL         +SS +   PV V    S        +   VS G
Sbjct: 922  YGHSLAVGSDGYAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAG 981

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
              H LA+ +    YAWG N  GQ G      P   P KV+
Sbjct: 982  QEHSLAVDKDGNAYAWGDNDNGQLGIKGSGRPYPYPMKVL 1021



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 125/294 (42%), Gaps = 50/294 (17%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG   TTI P      +  + +S S +  +    L V S+G  Y+WG   +G+LG G   
Sbjct: 655 LGNEATTITPPDTSRGIRFSQISGS-NDLTYGFSLAVGSDGNAYAWGSNSYGRLGDGTAT 713

Query: 308 SQRRPKLIMGGLYGKRVT-----------QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            +  P L+       R T           QVSAG  +S AV  DG +Y WG   +G+LG+
Sbjct: 714 QRTTPVLVK---KPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDGYVYAWGYNSYGQLGN 770

Query: 357 GDLKSRHTPTLVTELSDVG---------AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
               S + P  V + +             VS G+ H+L L  DG+  ++ G G+ GKLG+
Sbjct: 771 NSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGDYHSLALGSDGY-AYAWGDGSYGKLGN 829

Query: 408 EDTGKVTTPKVI-------EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS----- 455
                   P  +       +A +  +  +V AG + S+A+  DG  + WG G        
Sbjct: 830 NSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNY 889

Query: 456 SSISFHTPVLV----------TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           S+ S   PV V           GL + QI   S G  H LA+      YAWG N
Sbjct: 890 STSSSSVPVRVRDPASPTDTSKGLKAAQI---SAGYGHSLAVGSDGYAYAWGLN 940



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 37/211 (17%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP---RLQSLPSNIR------HIEAGQFCTFLLDSTGGL 240
             Y WG   + ++ +      S P   R  + P++         I AG   +  + S G  
Sbjct: 875  AYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDG-- 932

Query: 241  LVYGKGW--------LGLANTTIQPLPKRV-----PLEAA--IVSLSVSKCSEAHVLTVT 285
              Y   W        LG  +++   +P RV     P +A+  + +  VS   E H L V 
Sbjct: 933  --YAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQE-HSLAVD 989

Query: 286  SEGEVYSWGVGEHGKLG-HGNTLSQRRPKLIMGGLYGK-------RVTQVSAGHSHSAAV 337
             +G  Y+WG  ++G+LG  G+      P  ++             R  Q++AG  HS A+
Sbjct: 990  KDGNAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAI 1049

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
              DG    WG    GRLG G   ++  P  V
Sbjct: 1050 GTDGNTKAWGSNRDGRLGDGTTNTKWAPVPV 1080


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   +  K T+P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L S +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 46/373 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
               Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 ECQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
           +       YN          GQC QD            +G ED  CV++I +G   S ++
Sbjct: 344 NWF----SYN----------GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377

Query: 541 TVPPSNSALSSAF 553
              P +      F
Sbjct: 378 YSSPQSCGPPDDF 390



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
             G E+   +  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LQGSEEC--IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 172/364 (47%), Gaps = 38/364 (10%)

Query: 171 TPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN------IRHI 224
           TP+       T I      V+TWG N   Q+ D      +  RL S P +      ++ +
Sbjct: 39  TPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGT----TAYRLASAPVDFSNGMVVKRV 94

Query: 225 EAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA--IVSLSVSKCSEA 279
            AG      + S   L  +G+   G LG+ +TT    P +VP      +V+++ S  + A
Sbjct: 95  AAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAASTFNSA 154

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            VL   S+G+V +WG   +G+LG+G+T  Q  P  +        +  VS G  H  A+  
Sbjct: 155 AVL---SDGKVLTWGYNAYGQLGNGSTTDQSSPVEVS---ALSDIKGVSVGKYHMLALRS 208

Query: 340 DGLLYTWGEGDHGRLGHGDLKSR--HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
            G ++ WG    G+LG G   +   +TP     L  V +VS G+SH+L L  DG TVW+ 
Sbjct: 209 GGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDG-TVWAW 267

Query: 398 GSGNLGKLGHEDTGKVTT-PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-- 454
           G  N G+LG    G  T  P  ++  R   V +V AG   ++AL  DG V+ WG      
Sbjct: 268 GQNNQGQLG---IGSFTDRPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQ 324

Query: 455 ---SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG---QDN 508
               +++S  +PV V GL+   +V V+ GD H +A+     VY WG N+ GQ G   QD 
Sbjct: 325 LGDGTTLSRSSPVQVPGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDA 382

Query: 509 FSNP 512
             +P
Sbjct: 383 LPHP 386



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 157/368 (42%), Gaps = 28/368 (7%)

Query: 171 TPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQ 228
           TP+L      T       K++ WG N   Q+ D+       P   S  S  +++++ AG 
Sbjct: 462 TPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGG 521

Query: 229 FCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTS 286
           F +  L S G L  +G   L     +   L  R    L + +  +      E H L V S
Sbjct: 522 FHSLALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGETHSLVVLS 581

Query: 287 EGEVYSWGVGEHGKLGHGNT-------LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            G+V +WG   +G++G G +        S   P  +        +  V+AG +HS A+  
Sbjct: 582 NGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLF------SILGVAAGQNHSLALRS 635

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG  + G+LG G L  R  P  V  L+ V +V  G  H+L L  DG TVW+ G 
Sbjct: 636 DGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVSVVAGLYHSLALRSDG-TVWAWGD 694

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL-------- 451
              G+LG         P  +  L    V  V AG   S+AL  DG V+ WG         
Sbjct: 695 NGSGQLGDGTYFGQMLPVQVPGLSG--VVAVAAGGRHSLALRADGTVWAWGYNSNGQIGD 752

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  +S I   +PV V   S   ++ V+ GD+H +A+     V  WG N  GQ G    + 
Sbjct: 753 GSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYATNNT 812

Query: 512 PVDQPSKV 519
               P +V
Sbjct: 813 DRSTPGEV 820



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 154/325 (47%), Gaps = 22/325 (6%)

Query: 226 AGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL 282
           AG+  T +    G +  +G    G LG   T  +     V     +V   V+    +H L
Sbjct: 44  AGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVA-AGGSHAL 102

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
            V S+  +++WG    G+LG G+T S   P  + G   G  V  ++A   +SAAV  DG 
Sbjct: 103 AVLSDKTLWAWGRNGDGQLGVGSTTSSFSPVKVPG-RTGVEVVAMAASTFNSAAVLSDGK 161

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG--SG 400
           + TWG   +G+LG+G    + +P  V+ LSD+  VS G+ H L L + G TVW+ G    
Sbjct: 162 VLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLAL-RSGGTVWAWGFNGS 220

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
               LG     +  TP+    L+   V  V AG S S+AL WDG V+ WG      LG+ 
Sbjct: 221 GQLGLGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQGQLGI- 277

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
            S     +PV V  L+   +V+V+ G  H LAL     V+AWG N  GQ G D  +    
Sbjct: 278 GSFTDRPSPVQVPRLTG--VVEVAAGQFHALALRLDGTVWAWGFNGSGQLG-DGTTLSRS 334

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIA 539
            P +V GL  V    + AG   S+A
Sbjct: 335 SPVQVPGLTGVV--SVAAGDGHSVA 357



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 34/342 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKC--SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+          + P+  ++   +  + AG   +  L   G +  +G+  
Sbjct: 212 VWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNN 271

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG+ + T +P P +VP    +V ++  +    H L +  +G V++WG    G+LG G
Sbjct: 272 QGQLGIGSFTDRPSPVQVPRLTGVVEVAAGQF---HALALRLDGTVWAWGFNGSGQLGDG 328

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            TLS+  P  + G L G  V  V+AG  HS AV  DG +YTWG    G+LG G   +   
Sbjct: 329 TTLSRSSPVQVPG-LTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPH 385

Query: 365 PTLVTEL----------------SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
           PT    L                 D  +++      L L++ G ++   G G        
Sbjct: 386 PTPGQALLPFVCGNHRLEPEEQCDDGNSINGDGCSALCLAESGSSL--CGDGIKAAAEAC 443

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTP 463
           D G +        + +    ++ AG  F++    DG ++ WG          S+++  TP
Sbjct: 444 DDGNLVNGDGCSFVCRLETPRLVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTP 503

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           V V+  S   + +V+ G  H LAL    ++++WGSN++ Q G
Sbjct: 504 VSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLG 545


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 17/298 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + S+G V S G    G+LG   T    +P+ I   L    V  VS G  HS AV
Sbjct: 32  EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG    G+LG G+ K +   P  +  L+ +    V+CG  H++ LS+DG  V
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G+ + G+LG  ++     +P+ + +L    + +V AG   S AL+  G  F WG   
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L   ++ +  + PV +  L +  +V +S G  H   L+Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
            D  +     P  V  +E + V QI  GS  ++AY +  +   +S    P C    PH
Sbjct: 270 HDPTAEK-RGPQLVERIEGL-VSQIDCGSDHTLAY-IYTTGQVVSFGRGPGCASRSPH 324



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 27/299 (9%)

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLAN---TTIQPLPKRVPLE 265
           P L++L  N+  +  G+  +  +   G +  +G   +G LG+     TT   +PK++   
Sbjct: 70  PALETL--NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF--IPKKIKTL 125

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRV 324
           A I  + V+ C   H + ++ +G+V+SWG   HG+LG G    SQ  P+ +   L G  +
Sbjct: 126 AGIKIIQVA-CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR-SLEGIPL 183

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---GHGDLKSRHTPTLVTELSDVGAV--SC 379
            QV+AG  HS A++  G  + WG    G+L   G+     R+ P  +  L  +G V  SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT VL+QDG  V++ G  + G+LGH+ T +   P+++E +    V ++  G+  ++A
Sbjct: 244 GYKHTAVLTQDG-KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLA 301

Query: 440 LTW-DGLVFWWGLGLRSSSISFHTPVLVTGL----SSHQIVDVSIGDSHVLALSQYNEV 493
             +  G V  +G G   +S S H     + +    S+  + DV +   H+ A +  N V
Sbjct: 302 YIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQV--KHIFAGTYANFV 358



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 17/238 (7%)

Query: 310 RRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           RRP   + +  G  G  + Q ++G  HS  +  DG + + G+   G+LG         P 
Sbjct: 10  RRPLRERQVCAG--GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE 67

Query: 367 LVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALR 423
            +  L   +V  VSCG+ H+L +   G  V++ G+ + G+LG  +  + T  PK I+ L 
Sbjct: 68  RIPALETLNVALVSCGKEHSLAVCHKGR-VFAWGAASEGQLGIGEFKETTFIPKKIKTLA 126

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
             ++ +V  G   SVAL+ DG VF WG      LGL     S  +P  V  L    +  V
Sbjct: 127 GIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV 186

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAG 533
           + G  H  ALS     + WGSN+ GQ      + PV   +P  +  L+ + V  I  G
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  DG TV S G  + G+LG + T +   P+ I AL    V  V  G   
Sbjct: 28  AASGEHHSLLLLSDG-TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+A+   G VF WG      LG+     +   P  +  L+  +I+ V+ G  H +ALS+ 
Sbjct: 87  SLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSED 146

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V++WG+N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 23/200 (11%)

Query: 189 KVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G    +G 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 246 ---GWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHG 299
              G L L+     P+ +  P+   A+ +L V    C   H   +T +G+V+++G   +G
Sbjct: 208 NSAGQLALSGNN-APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 300 KLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +LGH  T  +R P+L+  + GL    V+Q+  G  H+       L Y +  G     G G
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGL----VSQIDCGSDHT-------LAYIYTTGQVVSFGRG 315

Query: 358 DLKSRHTPTLVTELSDVGAV 377
              +  +P    E SD+  +
Sbjct: 316 PGCASRSPHPGAESSDISCL 335


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V  +G VY+ G  + G+LGH    S+++P+ ++  L  + +  VS G +H+ 
Sbjct: 41  CGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVV-ALDAQNIVAVSCGEAHTL 97

Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
           A+ + G +Y WG    G+LG  G  +    P  +  LSD+    V+CG  H+L LS+   
Sbjct: 98  ALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156

Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
            V+  G    G+LG   D  K  +P++I++L      +V AG + S  LT  G +F WG 
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL   +  +  P L+  L + +IV +  G+ H  AL++   V+ +G+   GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
            ++ S+ ++ P KV  L    V QI  G   + A+ VP S    S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 168/394 (42%), Gaps = 46/394 (11%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           VYT GCN   Q+  E   K     +     NI  +  G+  T  L+  G +  +G    G
Sbjct: 55  VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114

Query: 247 WLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
            LGL  +     +P+ +   + I  + V+ C   H L ++   EV+ WG  ++G+LG G 
Sbjct: 115 QLGLLGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           +   Q  P+LI   L G    QV+AG +HS  +T  G ++ WG    G+LG  D   R+ 
Sbjct: 174 DCKKQASPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232

Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
           P L+  L    +  + CGE HT  L+++G  V++ G+G  G+LGH  T     P KV E 
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
           +     +  C     S  +   G ++ +GLG            L TG +S++    ++  
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +       YN          GQC           P  +   E  CV++I +G   S ++ 
Sbjct: 344 NWF----PYN----------GQC-----------PPDIDSEEYFCVKRIFSGGDQSFSHY 378

Query: 542 VPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
             P N      F   C D     +T+    ++++
Sbjct: 379 SNPQNCGPPDDFR--CPDPSKQIWTVNEALIQKW 410



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 122/264 (46%), Gaps = 24/264 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  R+    +     K+V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   KSR  P  V  L   ++ AVSCGE+HTL L+  G    W + S G LG
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
            LG E+   +  P+ I++L   ++ +V  G   S+AL+    VF WG      LGL    
Sbjct: 118 LLGSEEC--IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
               +P L+  L     + V+ G +H   L+    ++ WG N  GQ G ++  N    P+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
            +  L    +  IC G   + A T
Sbjct: 235 LLKSLRTQKIVYICCGEDHTAALT 258



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 17/212 (8%)

Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  WG    G+LG G       L+ R +   + +   V  V CG  HT+ +  DG TV++
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINK--KVRDVGCGLRHTVFVLDDG-TVYT 57

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL----- 451
            G  +LG+LGHE + K   P+ + AL    +  V  G + ++AL   G V+ WGL     
Sbjct: 58  CGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 452 -GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
            GL  S      P  +  LS  QIV V+ G  H LALS+ +EV+ WG N  GQ G     
Sbjct: 116 LGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                P  +  L  +   Q+ AG   S   T+
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +VY WG +   Q+      +C R PR ++SL    I  +  G + +  L     +  +G
Sbjct: 103 GQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162

Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  +   Q  P+ +     I  + V+    AH   +T  G ++ WG  + G+
Sbjct: 163 QNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +   +  P L+   L  +++  +  G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280

Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL  S V  ++CG  HT         ++S G G  G+LG   T    +P  
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 135/275 (49%), Gaps = 23/275 (8%)

Query: 245 KGWLGLANTTIQPLPKRVPLEAAI-VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           KG LG    T +  P+ V  EA +   +    C   H L V+  GE++SWG G  GKLG 
Sbjct: 383 KGVLGHGEETEELFPRVV--EALLGRDIRTVACGTEHTLAVSVNGEMFSWGCGRGGKLGL 440

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE-GDHGRLGH-GDLKS 361
            N L +  P L +G      +T VS    HSA+VTE G LYT+G  G H  LG+  + + 
Sbjct: 441 KNILDRYMP-LKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGPH--LGYTTEDRK 497

Query: 362 RHTPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           +  P  V  +  + + AVSCG   T+ L+ +G  ++S G  + G+LG      +  P +I
Sbjct: 498 QAVPRKVDFSTANKIKAVSCGLEFTIALNSEGE-LYSFGKNDCGQLGAGHFNDIEEPYLI 556

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG---LRSSSISFHTPVLVTGLS 470
           + L   R+ KV  G+    A+T +G V+ WG      LG   L +  I F  P   +   
Sbjct: 557 KHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAP---STFW 613

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           + +I D+  G SH + LS    VY +G+   GQ G
Sbjct: 614 NEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLG 648



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 23/318 (7%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           + ++++WGC    ++ L  +  +    ++ +  + NI  +   +  +  +  +G L  +G
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFG 483

Query: 245 KGWLGLANTT---IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +    L  TT    Q +P++V    A    +VS C     + + SEGE+YS+G  + G+L
Sbjct: 484 RSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVS-CGLEFTIALNSEGELYSFGKNDCGQL 542

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+      P LI   L G R+++VS G  H  AVT +G ++ WG  + G+LG   L++
Sbjct: 543 GAGHFNDIEEPYLIKH-LNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEA 601

Query: 362 RHTP-----TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGKV 413
              P     T   E  ++  + CG SHT+VLS  G  V+  G+G  G+LG   ++ +  +
Sbjct: 602 HDIPFEAPSTFWNE--EIQDIKCGGSHTVVLSCTG-VVYVFGNGQSGQLGVAVNQTSPYI 658

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTG 468
           T P ++      ++ KV  G   + A+T  G ++ WG G R           + P LV  
Sbjct: 659 TNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQDRYVPTLVES 718

Query: 469 LSSHQIVDVSIGDSHVLA 486
           L+  Q+  ++ G  H  A
Sbjct: 719 LAYKQVQSIACGAYHTAA 736



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 14/240 (5%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           ++Y+WG    G LGHG    +  P+++   L G+ +  V+ G  H+ AV+ +G +++WG 
Sbjct: 374 DIYTWGASPKGVLGHGEETEELFPRVVEA-LLGRDIRTVACGTEHTLAVSVNGEMFSWGC 432

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G  G+LG  ++  R+ P  +    +V    VSC E H+  +++ G       SG      
Sbjct: 433 GRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGPHLGYT 492

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
            ED  K   P+ ++     +++ V  G  F++AL  +G ++ +G      LG    +   
Sbjct: 493 TEDR-KQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHFN-DI 550

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQPS 517
             P L+  L+  +I  VS G  HV A++   +V+ WGSN  GQ G D       P + PS
Sbjct: 551 EEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPS 610



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 58/213 (27%)

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           + +D   +++ G+   G LGH +  +   P+V+EAL    +R V  GT  ++A++ +G +
Sbjct: 368 VKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEM 427

Query: 447 FWWGLG----------------------------------LRSSSISFHTPVLVTGLS-- 470
           F WG G                                  L S+S++    +   G S  
Sbjct: 428 FSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFGRSGP 487

Query: 471 ---------------------SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
                                +++I  VS G    +AL+   E+Y++G N  GQ G  +F
Sbjct: 488 HLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQLGAGHF 547

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            N +++P  +  L  V + ++  GS    A TV
Sbjct: 548 -NDIEEPYLIKHLNGVRISKVSCGSKHVGAVTV 579


>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
          Length = 1076

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 40/326 (12%)

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           L  +G G    LG  NT IQ LP +V         SVS  ++ H + V++ GEVY+WG G
Sbjct: 156 LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVS-AAKFHSVAVSARGEVYTWGFG 214

Query: 297 EHGKLGH------GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
             G+LGH          +   P+ +  GL  +RV  ++A   H+   TE G ++TWG   
Sbjct: 215 RGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNR 274

Query: 351 HGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
            G+LG+  + ++  P  V+ L S + AV+    HT V+S+ G  V++ G    G+LG+  
Sbjct: 275 EGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGE-VFTWGCNKKGQLGYGT 333

Query: 410 TGKVT--TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLV- 466
           +   +  TP+V+E L+   ++ V A    ++ L  DG +F WG  L    ++    V+V 
Sbjct: 334 SNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRL----VTPRRVVIVR 389

Query: 467 -------TGLSSHQ---IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                  T L  HQ   +V ++ G  H +AL++   ++ W S           S+P  + 
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVS-----------SDPDLRC 438

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V  L    V  I AG  +  A T 
Sbjct: 439 QQVYSLCGRTVSSISAGKYWIAAVTA 464



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 23/263 (8%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           A+ T++    R+P++  +VS  V +   +   +V +E  ++SWG G + +LG GNT  Q+
Sbjct: 121 ASITLEDSRSRIPVD--LVSGPVFQVVGSERDSVATE--LFSWGSGVNYQLGTGNTHIQK 176

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRH----T 364
            P   +  L+G  +  VSA   HS AV+  G +YTWG G  GRLGH   D+ S      T
Sbjct: 177 LP-CKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235

Query: 365 PTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           P  VT       V A++  + HT+V ++ G  V++ GS   G+LG+        P+ + +
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGE-VFTWGSNREGQLGYTSVDTQPIPRRVSS 294

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQI 474
           L K ++  V A    +  ++  G VF WG   +       S+S S +TP +V  L    +
Sbjct: 295 L-KSKIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVL 353

Query: 475 VDVSIGDSHVLALSQYNEVYAWG 497
             V+    H + L    E++ WG
Sbjct: 354 KGVAAAKYHTIVLGADGEIFTWG 376



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 21/191 (10%)

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G    +  TE   L++WG G + +LG G+   +  P  V  L    + +VS  + H++ +
Sbjct: 146 GSERDSVATE---LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAV 202

Query: 388 SQDGHTVWSMGSGNLGKLGHED------TGKVTTPK-VIEALRKFRVRKVCAGTSFSVAL 440
           S  G  V++ G G  G+LGH +         V TP+ V   L   RV+ + A    +V  
Sbjct: 203 SARGE-VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVA 261

Query: 441 TWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T  G VF WG   R   + + +      P  V+ L S +IV V+  + H   +S+  EV+
Sbjct: 262 TEGGEVFTWGSN-REGQLGYTSVDTQPIPRRVSSLKS-KIVAVAAANKHTAVISESGEVF 319

Query: 495 AWGSNTMGQCG 505
            WG N  GQ G
Sbjct: 320 TWGCNKKGQLG 330



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 71/233 (30%)

Query: 186 AHSKVYTWG----CNLHHQILDEVRGKCS--RPRLQSL---PSNIRHIEAGQFCTFLLDS 236
           A  +VYTWG      L H   D   G+ +   PR  ++      ++ I A +  T +   
Sbjct: 204 ARGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATE 263

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G +  +G   +G LG  +   QP+P+RV  L++ IV+++    +  H   ++  GEV++
Sbjct: 264 GGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIVAVA---AANKHTAVISESGEVFT 320

Query: 293 WGVGEHGKLGHG--NTLSQRRPK--------------------LIMGG-----LYGKR-- 323
           WG  + G+LG+G  N+ S   P+                    +++G       +G R  
Sbjct: 321 WGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRLV 380

Query: 324 --------------------------VTQVSAGHSHSAAVTEDGLLYTWGEGD 350
                                     V  ++AG  HS A+TEDG ++ W   D
Sbjct: 381 TPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVSSD 433



 Score = 41.6 bits (96), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 102/259 (39%), Gaps = 63/259 (24%)

Query: 181 TDISVAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           T ++    +V+TWG N   Q+    V  +    R+ SL S I  + A    T ++  +G 
Sbjct: 258 TVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGE 317

Query: 240 LLVYG---KGWLGL--ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           +  +G   KG LG   +N+     P+ V      V   V+  ++ H + + ++GE+++WG
Sbjct: 318 VFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVA-AAKYHTIVLGADGEIFTWG 376

Query: 295 -------------------------------VGEHGKLGHGNTLSQ---------RRPKL 314
                                          V     + H   L++           P L
Sbjct: 377 HRLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVSSDPDL 436

Query: 315 IMGGLY---GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL 371
               +Y   G+ V+ +SAG    AAVT  G +Y W     G+      K + T  + T L
Sbjct: 437 RCQQVYSLCGRTVSSISAGKYWIAAVTATGDVYMW----DGK------KDKDTTPVATRL 486

Query: 372 SDVG---AVSCGESHTLVL 387
             V    +VS GE+H L++
Sbjct: 487 HGVKRSTSVSVGETHLLIV 505


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW-- 247
           V++WG N +  + D      + P      + I  I AG      L S G +  +G G+  
Sbjct: 56  VWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSG 115

Query: 248 -LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG    +++  P  +     I ++S       H L + ++G ++SWG  ++G+LG GNT
Sbjct: 116 ELGDGTNSLRTTPAPINGLTGITAIS---AGWNHTLALKADGTLWSWGQNQYGQLGTGNT 172

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            +   P  + G +    +T +S+G  HS  +  DG +++WG  + G+LG+G   +  TP 
Sbjct: 173 TNSNIPLQVPGQI---GITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPH 229

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            ++ L+ +  VS G  H+  L  DG TVW+ G    G+L + +  K+ +   ++A     
Sbjct: 230 QISGLNGIINVSAGVIHSTALKSDG-TVWNWGCNFRGELANGN--KIDSYIPVQANGLNG 286

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           +  + AG  FS A+  DG  + WG      LG  S S    +P+ V+ LS    +D   G
Sbjct: 287 IIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKS-DVTSPMQVSSLSGITAIDT--G 343

Query: 481 DSHVLALSQYNEVYAWGSNTMGQ 503
            ++ +AL     ++A+G NT GQ
Sbjct: 344 ATYTVALKTDGNIFAFGENTYGQ 366



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 22/262 (8%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           ++G V+SWG  ++G LG G T +   P  + G L G  +T +SAG +H  A+  DG ++T
Sbjct: 52  NDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKG-LNG--ITAISAGWAHFVALKSDGTVWT 108

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG G  G LG G    R TP  +  L+ + A+S G +HTL L  DG T+WS G    G+L
Sbjct: 109 WGVGYSGELGDGTNSLRTTPAPINGLTGITAISAGWNHTLALKADG-TLWSWGQNQYGQL 167

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G  +T     P  ++   +  +  + +G   S+ +  DG V+ WG      LG  ++S +
Sbjct: 168 GTGNTTNSNIP--LQVPGQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNS-N 224

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ--PS 517
             TP  ++GL  + I++VS G  H  AL     V+ WG N  G+       N +D   P 
Sbjct: 225 NPTPHQISGL--NGIINVSAGVIHSTALKSDGTVWNWGCNFRGELAN---GNKIDSYIPV 279

Query: 518 KVVGLEDVCVRQICAGSLFSIA 539
           +  GL  +    I AG  FS A
Sbjct: 280 QANGLNGIIA--ITAGWEFSSA 299



 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 112/220 (50%), Gaps = 17/220 (7%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           VSAG++ + A+  DG +++WG   +G LG G   + ++P  V  L+ + A+S G +H + 
Sbjct: 40  VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHFVA 99

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L  DG TVW+ G G  G+LG       TTP  I  L    +  + AG + ++AL  DG +
Sbjct: 100 LKSDG-TVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLALKADGTL 156

Query: 447 FWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           + WG      LG  +++ S + P+ V G     I  +S G  H L +     V++WG N 
Sbjct: 157 WSWGQNQYGQLGTGNTTNS-NIPLQVPG--QIGITSISSGGGHSLVIKNDGTVWSWGCNN 213

Query: 501 MGQCGQD-NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            GQ G   N +NP   P ++ GL  +    + AG + S A
Sbjct: 214 FGQLGNGTNSNNPT--PHQISGLNGII--NVSAGVIHSTA 249



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 138/328 (42%), Gaps = 73/328 (22%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV--AH-------SKVYTWGCNLHHQILDE 204
           LGD  +SNSN+ +      ++    G T IS   AH         V+TWG     ++ D 
Sbjct: 67  LGDGTTSNSNSPV------QVKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG 120

Query: 205 VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKR 261
                + P   +  + I  I AG   T  L + G L  +G+   G LG  NTT   +P +
Sbjct: 121 TNSLRTTPAPINGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQ 180

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG---- 317
           VP +  I S+S       H L + ++G V+SWG    G+LG+G   +   P  I G    
Sbjct: 181 VPGQIGITSIS---SGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGI 237

Query: 318 ---------------------------------------------GLYGKRVTQVSAGHS 332
                                                        GL G  +  ++AG  
Sbjct: 238 INVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNG--IIAITAGWE 295

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
            S+A+  DG  + WG  D+G+LG+G      +P  V+ LS + A+  G ++T+ L  DG+
Sbjct: 296 FSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGN 355

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            +++ G    G+LG+  T   TTP+++ 
Sbjct: 356 -IFAFGENTYGQLGNGTTTGSTTPELVS 382



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 13/167 (7%)

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           + H+  +V   S   AVS G + T+ L  DG TVWS G    G LG   T    +P  ++
Sbjct: 24  TTHSQKVVAGTSGYIAVSAGNTTTIALKNDG-TVWSWGFNQNGHLGDGTTSNSNSPVQVK 82

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIV 475
            L    +  + AG +  VAL  DG V+ WG+G    L   + S   TP  + GL+   I 
Sbjct: 83  GLNG--ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--IT 138

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQPSKV 519
            +S G +H LAL     +++WG N  GQ G  N +N   P+  P ++
Sbjct: 139 AISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI 185


>gi|50955670|ref|YP_062958.1| hypothetical protein Lxx21640 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50952152|gb|AAT89853.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 596

 Score =  118 bits (296), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 94/312 (30%), Positives = 136/312 (43%), Gaps = 17/312 (5%)

Query: 213 RLQSLPSNIRH--IEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           RLQ  P  +    + AG    + L   G +  +G    G LG  +T     P +V L A 
Sbjct: 42  RLQIGPVGVTFTAVSAGSLSAYALGDDGNVYAWGDNEYGQLGTGDTVNAHTPVKVMLPAG 101

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           +   ++S  S +    +  +G  Y+WG  E+G+LG G+T++   P  +M    G + T +
Sbjct: 102 VKFTALSAGSLS-AYALGDDGHAYAWGDNEYGQLGTGDTVNAHTPVKVMLPA-GVKFTAL 159

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTL 385
           S+G   + AV  DG  Y WG   +G+LG       H P  V   + V    +S G     
Sbjct: 160 SSGGPSAYAVGNDGKTYAWGFNGYGQLGTDTTADAHVPVAVAVPAGVSFTTLSGGSLSAY 219

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
            L  DG T ++ G    G+LG + T     P  +          V AG S + AL  D  
Sbjct: 220 ALGNDGKT-YAWGFNGYGQLGTDTTADAHVPVAVAVPAGVSFTAVSAGVSSAYALGDDRK 278

Query: 446 VFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
            + WG      LG R  + + H PV VT  +    V VS G   V A  Q  + YAWG N
Sbjct: 279 TYAWGDNEYGQLG-RGDTANAHAPVAVTVSAGETFVSVSGGAGSVYARGQNGDTYAWGDN 337

Query: 500 TMGQCGQDNFSN 511
             GQ G+ + +N
Sbjct: 338 DYGQLGRGDTAN 349



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--IEAGQFCTFLLDSTGGLLVYG-- 244
           K Y WG N + Q+  +       P   ++P+ +    +  G    + L + G    +G  
Sbjct: 174 KTYAWGFNGYGQLGTDTTADAHVPVAVAVPAGVSFTTLSGGSLSAYALGNDGKTYAWGFN 233

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK-CSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G LG   T    +P  V + A +   +VS   S A+ L    + + Y+WG  E+G+LG
Sbjct: 234 GYGQLGTDTTADAHVPVAVAVPAGVSFTAVSAGVSSAYALG--DDRKTYAWGDNEYGQLG 291

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
            G+T +   P  +     G+    VS G     A  ++G  Y WG+ D+G+LG GD  + 
Sbjct: 292 RGDTANAHAPVAVTVSA-GETFVSVSGGAGSVYARGQNGDTYAWGDNDYGQLGRGDTANA 350

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           HTP  V    +V  V  G      +S  G   W++ S
Sbjct: 351 HTPIEVAAGVEVTGVLFGSLPGTAVSSQGGKTWTVTS 387


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 150/307 (48%), Gaps = 21/307 (6%)

Query: 223 HIEAGQFCTFLLDSTGGLLVYGK---GWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCS 277
           HI  G   T ++   G L ++G    G LGL   NT  +P   +  L+     L+V  C 
Sbjct: 43  HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAV--CG 99

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             H L  T +G VY+ G    G+LG G+T  +    LI       ++ Q++AG   SAAV
Sbjct: 100 RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAV 159

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           TEDG L+ WG+   G++G  D      P  V     V ++SCG  H+  ++ DG  +++ 
Sbjct: 160 TEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGE-LYTF 218

Query: 398 GSGNLGKLG--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
           G    GKLG   E       P+ +  + + +V KV  G   +V LT  G V+ +GLG   
Sbjct: 219 GEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG-VYTFGLGQYG 276

Query: 453 -LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQD 507
            L   ++ F T  P  V  L SH+I +V+ G+SH   +++   ++ +G    G+   G++
Sbjct: 277 QLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEE 336

Query: 508 NFSNPVD 514
           NF+N  D
Sbjct: 337 NFANQFD 343


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  118 bits (296), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 95/309 (30%), Positives = 142/309 (45%), Gaps = 31/309 (10%)

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLA-NTTIQPLPKRVPLEA-AIVSLS 272
           P  +  + AG   +  +   G L  +G   +G LG    T  +  P   P+EA A V + 
Sbjct: 40  PYAVSAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSP--APVEALAGVKIV 97

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLG------HGNTLSQRR----PKLIMGGLYGK 322
            +     H L V  +G  Y+WG  E+G+ G         T + RR    P+     L   
Sbjct: 98  QAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKL--- 154

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
           +V QV+AG +HS  +T++G ++TWG+        GD+K   TP  V  L  V  ++ G  
Sbjct: 155 KVQQVAAGGTHSVVLTQEGHVWTWGQ----PWPPGDIKQISTPVRVQGLEKVMMIAVGAF 210

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H L LS+D   +W+ G+   G+LG  DT   + P  +E L    +  + AG   S ALT 
Sbjct: 211 HNLALSEDA-VLWAWGNNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTK 269

Query: 443 DGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
           DG V+ WG      LG      S   P+ V  L    IV VS G +H +AL+    ++++
Sbjct: 270 DGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSY 329

Query: 497 GSNTMGQCG 505
           G    G+ G
Sbjct: 330 GRGDHGRLG 338



 Score =  113 bits (283), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 21/266 (7%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V +WG GE G+LG G    ++     +  L    V+ V AG  +S A+ +DG L+TWG  
Sbjct: 10  VLAWGSGEDGQLGMGGC-DEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWN 68

Query: 350 DHGRLGH-GDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             G LGH  + K+  +P  V  L+ V  V  + G  H L +   G   ++ G    G+ G
Sbjct: 69  QRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRA-YAWGGNEYGQCG 127

Query: 407 HEDTGK----------VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS 456
            E   K          + TP+      K +V++V AG + SV LT +G V+ WG      
Sbjct: 128 EEPERKEDGTRALRRDIPTPQ--RCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQPWPPG 185

Query: 457 SI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
            I    TPV V GL   +++ +++G  H LALS+   ++AWG+N  GQ G  + + P  Q
Sbjct: 186 DIKQISTPVRVQGL--EKVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGD-TQPRSQ 242

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYT 541
           P +V GL  + +  I AG   S A T
Sbjct: 243 PIRVEGLSGLSLVDIAAGGWHSTALT 268



 Score =  107 bits (267), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 31/315 (9%)

Query: 246 GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G LG+     +    RV  L+   VS  V+    +  L +  +G +++WG  + G LGH 
Sbjct: 19  GQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNS--LAICDDGRLFTWGWNQRGTLGHP 76

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH-------G 357
                      +  L G ++ Q + G  H  AV + G  Y WG  ++G+ G        G
Sbjct: 77  PETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDG 136

Query: 358 DLKSRH---TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
               R    TP        V  V+ G +H++VL+Q+GH VW+ G          D  +++
Sbjct: 137 TRALRRDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGH-VWTWGQ----PWPPGDIKQIS 191

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
           TP  ++ L K  V  +  G   ++AL+ D +++ WG      LG+  +      P+ V G
Sbjct: 192 TPVRVQGLEK--VMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPR-SQPIRVEG 248

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC--GQDNFSNPVDQPSKVVGLEDVC 526
           LS   +VD++ G  H  AL++  EVYAWG    G+   G D  S+ V  P KV  L+   
Sbjct: 249 LSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMV--PLKVQLLDGED 306

Query: 527 VRQICAGSLFSIAYT 541
           + Q+  G   S+A T
Sbjct: 307 IVQVSCGGTHSVALT 321



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 27/217 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+TWG       + ++    S P R+Q L   +  I  G F    L     L  +G    
Sbjct: 175 VWTWGQPWPPGDIKQI----STPVRVQGL-EKVMMIAVGAFHNLALSEDAVLWAWGNNEY 229

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG+ +T  +  P RV     +  LS+   +    H   +T +GEVY+WG GEHG+LG 
Sbjct: 230 GQLGIGDTQPRSQPIRV---EGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGF 286

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG------ 357
           G+  S     L +  L G+ + QVS G +HS A+T DG ++++G GDHGRLG+G      
Sbjct: 287 GDDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTG 346

Query: 358 -------DLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
                  +L    T      L     V+CG  HTL +
Sbjct: 347 HPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAI 383


>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 40/326 (12%)

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           L  +G G    LG  NT IQ LP +V         SVS  ++ H + V++ GEVY+WG G
Sbjct: 156 LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVS-AAKFHSVAVSARGEVYTWGFG 214

Query: 297 EHGKLGH------GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
             G+LGH          +   P+ +  GL  +RV  ++A   H+   TE G ++TWG   
Sbjct: 215 RGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNR 274

Query: 351 HGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
            G+LG+  + ++  P  V+ L S + AV+    HT V+S+ G  V++ G    G+LG+  
Sbjct: 275 EGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGE-VFTWGCNKKGQLGYGT 333

Query: 410 TGKVT--TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLV- 466
           +   +  TP+V+E L+   ++ V A    ++ L  DG +F WG  L    ++    V+V 
Sbjct: 334 SNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRL----VTPRRVVIVR 389

Query: 467 -------TGLSSHQ---IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                  T L  HQ   +V ++ G  H +AL++   ++ W S           S+P  + 
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVS-----------SDPDLRC 438

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V  L    V  I AG  +  A T 
Sbjct: 439 QQVYSLCGRTVSSISAGKYWIAAVTA 464



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 23/263 (8%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           A+ T++    R+P++  +VS  V +   +   +V +E  ++SWG G + +LG GNT  Q+
Sbjct: 121 ASITLEDSRSRIPVD--LVSGPVFQVVGSERDSVATE--LFSWGSGVNYQLGTGNTHIQK 176

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRH----T 364
            P   +  L+G  +  VSA   HS AV+  G +YTWG G  GRLGH   D+ S      T
Sbjct: 177 LP-CKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235

Query: 365 PTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           P  VT       V A++  + HT+V ++ G  V++ GS   G+LG+        P+ + +
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGE-VFTWGSNREGQLGYTSVDTQPIPRRVSS 294

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQI 474
           L K ++  V A    +  ++  G VF WG   +       S+S S +TP +V  L    +
Sbjct: 295 L-KSKIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVL 353

Query: 475 VDVSIGDSHVLALSQYNEVYAWG 497
             V+    H + L    E++ WG
Sbjct: 354 KGVAAAKYHTIVLGADGEIFTWG 376



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 21/191 (10%)

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL 387
           G    +  TE   L++WG G + +LG G+   +  P  V  L    + +VS  + H++ +
Sbjct: 146 GSERDSVATE---LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAV 202

Query: 388 SQDGHTVWSMGSGNLGKLGHED------TGKVTTPK-VIEALRKFRVRKVCAGTSFSVAL 440
           S  G  V++ G G  G+LGH +         V TP+ V   L   RV+ + A    +V  
Sbjct: 203 SARGE-VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVA 261

Query: 441 TWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T  G VF WG   R   + + +      P  V+ L S +IV V+  + H   +S+  EV+
Sbjct: 262 TEGGEVFTWGSN-REGQLGYTSVDTQPIPRRVSSLKS-KIVAVAAANKHTAVISESGEVF 319

Query: 495 AWGSNTMGQCG 505
            WG N  GQ G
Sbjct: 320 TWGCNKKGQLG 330



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 71/233 (30%)

Query: 186 AHSKVYTWG----CNLHHQILDEVRGKCS--RPRLQSL---PSNIRHIEAGQFCTFLLDS 236
           A  +VYTWG      L H   D   G+ +   PR  ++      ++ I A +  T +   
Sbjct: 204 ARGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATE 263

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G +  +G   +G LG  +   QP+P+RV  L++ IV+++    +  H   ++  GEV++
Sbjct: 264 GGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIVAVA---AANKHTAVISESGEVFT 320

Query: 293 WGVGEHGKLGHG--NTLSQRRPK--------------------LIMGG-----LYGKR-- 323
           WG  + G+LG+G  N+ S   P+                    +++G       +G R  
Sbjct: 321 WGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRLV 380

Query: 324 --------------------------VTQVSAGHSHSAAVTEDGLLYTWGEGD 350
                                     V  ++AG  HS A+TEDG ++ W   D
Sbjct: 381 TPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVSSD 433


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 17/298 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + S+G V S G    G+LG   T    +P+ I   L    V  VS G  HS AV
Sbjct: 32  EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PALETLNVALVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG    G+LG G+ K +   P  +  L+ +    V+CG  H++ LS+DG  V
Sbjct: 91  CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G+ + G+LG  ++     +P+ + +L    + +V AG   S AL+  G  F WG   
Sbjct: 150 FSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L   ++ +  + PV +  L +  +V +S G  H   L+Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPH 563
            D  +     P  V  +E + V QI  GS  ++AY +  +   +S    P C    PH
Sbjct: 270 HDPTAEK-RGPQLVERIEGL-VSQIDCGSDHTLAY-IYTTGQVVSFGRGPGCASRSPH 324



 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 149/299 (49%), Gaps = 27/299 (9%)

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLAN---TTIQPLPKRVPLE 265
           P L++L  N+  +  G+  +  +   G +  +G   +G LG+     TT   +PK++   
Sbjct: 70  PALETL--NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF--IPKKIKTL 125

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRV 324
           A I  + V+ C   H + ++ +G+V+SWG   HG+LG G    SQ  P+ +   L G  +
Sbjct: 126 AGIKIIQVA-CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR-SLEGIPL 183

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---GHGDLKSRHTPTLVTELSDVGAV--SC 379
            QV+AG  HS A++  G  + WG    G+L   G+     R+ P  +  L  +G V  SC
Sbjct: 184 AQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISC 243

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  HT VL+QDG  V++ G  + G+LGH+ T +   P+++E +    V ++  G+  ++A
Sbjct: 244 GYKHTAVLTQDG-KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGL-VSQIDCGSDHTLA 301

Query: 440 LTW-DGLVFWWGLGLRSSSISFHTPVLVTGL----SSHQIVDVSIGDSHVLALSQYNEV 493
             +  G V  +G G   +S S H     + +    S+  + DV +   H+ A +  N V
Sbjct: 302 YIYTTGQVVSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQV--KHIFAGTYANFV 358



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 17/238 (7%)

Query: 310 RRP---KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           RRP   + +  G  G  + Q ++G  HS  +  DG + + G+   G+LG         P 
Sbjct: 10  RRPLRERQVCAG--GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPE 67

Query: 367 LVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALR 423
            +  L   +V  VSCG+ H+L +   G  V++ G+ + G+LG  +  + T  PK I+ L 
Sbjct: 68  RIPALETLNVALVSCGKEHSLAVCHKGR-VFAWGAASEGQLGIGEFKETTFIPKKIKTLA 126

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
             ++ +V  G   SVAL+ DG VF WG      LGL     S  +P  V  L    +  V
Sbjct: 127 GIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV 186

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD--QPSKVVGLEDVCVRQICAG 533
           + G  H  ALS     + WGSN+ GQ      + PV   +P  +  L+ + V  I  G
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCG 244



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  DG TV S G  + G+LG + T +   P+ I AL    V  V  G   
Sbjct: 28  AASGEHHSLLLLSDG-TVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEH 86

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           S+A+   G VF WG      LG+     +   P  +  L+  +I+ V+ G  H +ALS+ 
Sbjct: 87  SLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSED 146

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V++WG+N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSL 198



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 189 KVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           +V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G    +G 
Sbjct: 148 QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGS 207

Query: 246 ---GWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHG 299
              G L L+     P+ +  P+   A+ +L V    C   H   +T +G+V+++G   +G
Sbjct: 208 NSAGQLALSGNN-APVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYG 266

Query: 300 KLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +LGH  T  +R P+L+  + GL    V+Q+  G  H+       L Y +  G     G G
Sbjct: 267 QLGHDPTAEKRGPQLVERIEGL----VSQIDCGSDHT-------LAYIYTTGQVVSFGRG 315

Query: 358 DLKSRHTPTLVTELSDV 374
              +  +P    E SD+
Sbjct: 316 PGCASRSPHPGAESSDI 332


>gi|296445916|ref|ZP_06887867.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256584|gb|EFH03660.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 492

 Score =  118 bits (295), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 155/350 (44%), Gaps = 23/350 (6%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A   V  WG N + Q+ D    + S P  +  LPS+I  I  G   +  L S G +  +G
Sbjct: 108 AAGGVSCWGRNDYGQLGDGTMVRRSSPVSVSGLPSDIVAISMGDGHSCALTSAGAVECWG 167

Query: 245 ---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
               G LG      +  P  V  L + +V+++     + H   +TS G V  WG    G+
Sbjct: 168 WNQVGQLGDGTYPNRSAPGVVTRLSSGVVAIA---SGDVHSCALTSVGAVKCWGSNVAGQ 224

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG G     R P  + G   G  V  ++ G+ HS A+   G +  WG   HG+LG G   
Sbjct: 225 LGAGTPTYHRTPIGVTGLRSG--VVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTA 282

Query: 361 SRHTPTLVTELSD-VGAVSCGESHTLVLSQDGHTV-WSMGSGNLGKLGHEDTGKVTTPKV 418
           +R TP  V  LS  V A++ G  H+  L++ G  V W  G  + G++G   T    TP V
Sbjct: 283 NRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVVCW--GDNSNGQIGDGTTTTRHTPVV 340

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
           +  L    V  +  G++ + AL  +G V  WG      LG R+ + +  TPV V G  + 
Sbjct: 341 VSGLTS-GVVAIATGSNHNCALKGNGAVLCWGSNQDGVLGDRTMT-NRTTPVAVPG-HTR 397

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
            +V +++G  H         V  WGS+ +GQ G   F      P  + G 
Sbjct: 398 GVVAIALGSDHTCVTISSGVVRCWGSDGLGQLGDGTFQRRRLAPKPIPGF 447



 Score = 99.8 bits (247), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 102/324 (31%), Positives = 142/324 (43%), Gaps = 28/324 (8%)

Query: 210 SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ----PLPKRVPLE 265
           SR RL S P+  +    GQ    L+    GL     G +G A+  I     PL    P  
Sbjct: 38  SRTRLLSRPNPTK---LGQTVK-LVGEVDGLGGAPTGTVGFADGAITLGAGPLS---PYG 90

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A   +LS+      H   + + G V  WG  ++G+LG G  + +  P  + G      + 
Sbjct: 91  AGQATLSMGG---QHSCALPAAGGVSCWGRNDYGQLGDGTMVRRSSPVSVSG--LPSDIV 145

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-VGAVSCGESHT 384
            +S G  HS A+T  G +  WG    G+LG G   +R  P +VT LS  V A++ G+ H+
Sbjct: 146 AISMGDGHSCALTSAGAVECWGWNQVGQLGDGTYPNRSAPGVVTRLSSGVVAIASGDVHS 205

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
             L+  G  V   GS   G+LG        TP  +  LR   V  +  G   S AL   G
Sbjct: 206 CALTSVG-AVKCWGSNVAGQLGAGTPTYHRTPIGVTGLRS-GVVAIAGGNQHSCALATAG 263

Query: 445 LVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            V  WG      LG   ++ +  TPV V  LSS  +V ++ G  H  AL++   V  WG 
Sbjct: 264 AVKCWGSNSHGQLG-DGTTANRATPVAVPSLSS-GVVAITAGWGHSCALTKAGAVVCWGD 321

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGL 522
           N+ GQ G D  +     P  V GL
Sbjct: 322 NSNGQIG-DGTTTTRHTPVVVSGL 344


>gi|336118147|ref|YP_004572915.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
 gi|334685927|dbj|BAK35512.1| hypothetical protein MLP_24980 [Microlunatus phosphovorus NM-1]
          Length = 463

 Score =  118 bits (295), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 97/330 (29%), Positives = 157/330 (47%), Gaps = 30/330 (9%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GW 247
           Y WG N   ++      +   PR   LP+ I  ++ G   T  L  +G +L +G    G 
Sbjct: 11  YVWGYNNTGELGVNHAARVYSPRPARLPAGIVDLQGGANFTIALTESGRVLTWGSNEHGQ 70

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +   +  P++V L     + +++  ++ HV+ VT+ G + +WG    G+LG G+  
Sbjct: 71  LGDGSRRPRRTPQQVRLPEGHRAAAIAAGTD-HVVVVTTRGHLITWGRNHRGQLGTGDRD 129

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH-GDL---KSRH 363
            +  PK++      + V +V+AG   SAA+T  G L TWG    G+L   G +   +   
Sbjct: 130 DRLSPKVVRA----ETVRKVAAGDGISAAITPGGRLLTWGRNGQGQLAQKGSVPVGRDVL 185

Query: 364 TPTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            P    ++S+ V AV  G  H +VL+ DG  +           G +  G     K+    
Sbjct: 186 KPIHARQVSEPVSAVDAGLRHLVVLTSDGDVL---------MFGVDVAGLPLGKKMALPA 236

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH--TPVLV--TGLSSHQIV 475
           R  +VR + AG   ++ALT  G++  WG   LG  ++  S H  +PV+V  +G+   Q+ 
Sbjct: 237 RWGQVRTIVAGEDHTLALTRRGVILGWGANDLGQLATGDSAHQLSPVVVKLSGVRG-QVT 295

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +  G  H LAL+  +EVYAWG  + G  G
Sbjct: 296 QIRAGHRHGLALTDKHEVYAWGDGSFGAIG 325



 Score = 81.3 bits (199), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL 214
           GDR    S   + + +  K+    G +       ++ TWG N   Q+  +      R  L
Sbjct: 126 GDRDDRLSPKVVRAETVRKVAAGDGISAAITPGGRLLTWGRNGQGQLAQKGSVPVGRDVL 185

Query: 215 QSLPSN-----IRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIV 269
           + + +      +  ++AG     +L S G +L++G    GL      PL K++ L A   
Sbjct: 186 KPIHARQVSEPVSAVDAGLRHLVVLTSDGDVLMFGVDVAGL------PLGKKMALPARWG 239

Query: 270 SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVS 328
            +      E H L +T  G +  WG  + G+L  G++  Q  P ++ + G+ G+ VTQ+ 
Sbjct: 240 QVRTIVAGEDHTLALTRRGVILGWGANDLGQLATGDSAHQLSPVVVKLSGVRGQ-VTQIR 298

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           AGH H  A+T+   +Y WG+G  G +G G  K   T  L  +
Sbjct: 299 AGHRHGLALTDKHEVYAWGDGSFGAIGTGGQKPEATSVLTPQ 340



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 19/272 (6%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYG-- 244
           +V TWG N H Q+ D  R     P+   LP   R   I AG     ++ + G L+ +G  
Sbjct: 59  RVLTWGSNEHGQLGDGSRRPRRTPQQVRLPEGHRAAAIAAGTDHVVVVTTRGHLITWGRN 118

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            +G LG  +   +  PK V  E      +    S A    +T  G + +WG    G+L  
Sbjct: 119 HRGQLGTGDRDDRLSPKVVRAETVRKVAAGDGISAA----ITPGGRLLTWGRNGQGQLAQ 174

Query: 304 GNTLSQRRP--KLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
             ++   R   K I      + V+ V AG  H   +T DG +  +G    G      L  
Sbjct: 175 KGSVPVGRDVLKPIHARQVSEPVSAVDAGLRHLVVLTSDGDVLMFGVDVAG------LPL 228

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE- 420
                L      V  +  GE HTL L++ G  +   G+ +LG+L   D+    +P V++ 
Sbjct: 229 GKKMALPARWGQVRTIVAGEDHTLALTRRG-VILGWGANDLGQLATGDSAHQLSPVVVKL 287

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           +  + +V ++ AG    +ALT    V+ WG G
Sbjct: 288 SGVRGQVTQIRAGHRHGLALTDKHEVYAWGDG 319


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  118 bits (295), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 188/415 (45%), Gaps = 55/415 (13%)

Query: 150 NIKPLGDRKSSNSNTDIDSTSTPKLTY---NIGDTDISVAHSKVY--TWGCNLHHQILDE 204
           N KPL D ++ NS T++++  T K  Y   N+GD + SV  +++   T   +L+ QI+  
Sbjct: 38  NTKPLSDSRN-NSTTNLNNY-TYKYAYSYDNLGDNNSSVTKNQIKENTDNSSLNKQIIYA 95

Query: 205 VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPK---- 260
                 +P + S  ++  +           D++  +++            I  +PK    
Sbjct: 96  TNDYGDKPTVNSNSNDDDNKSTN-------DNSEEVIISNDYSNDDQFIDISTIPKLELD 148

Query: 261 ------RVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
                 R+  L+  +V +S       H   +T +G +Y+WG G  GKLGHG   S   P+
Sbjct: 149 DNEQYERIDFLKEKVVFISTGAI---HTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPR 205

Query: 314 LI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVT 369
           L+         RV  V+ G  H+ A+T  G +Y++G  D  +LG G++ S +  TP LVT
Sbjct: 206 LVEFFETKPSLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVT 265

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
             S     +   S  +++S    T+++       K   + + K+            R+ K
Sbjct: 266 FQSPQSLSNSNSSSPIIMSNSTSTLFN-------KQQQQSSNKID-----------RIIK 307

Query: 430 VCAGTSFSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
           +   T+ S A++  G ++ WG G         S+   TP  V  L  H IVD+S+G  H 
Sbjct: 308 LSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHS 367

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +AL++  EV++WG    GQ G   F++    P ++   ++  ++ I AG   SIA
Sbjct: 368 MALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIA 422



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 110/204 (53%), Gaps = 24/204 (11%)

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
           I+ LS   CS      ++  G +Y+WG G++G+LGHG++L Q  PK +M  L+G  +  +
Sbjct: 305 IIKLS---CSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVM-SLHGHTIVDM 360

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTELSD--VGAVSCGESHT 384
           S G  HS A+T+ G +++WG G++G+LGHG   S+  TP  +    +  +  +S G  H+
Sbjct: 361 SLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHS 420

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDT----GKVTTPKVIEALRKF------------RVR 428
           + +  +G ++++ G G+ G LG   +    G + +P +I++L               R  
Sbjct: 421 IAIDTNG-SMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFI 479

Query: 429 KVCAGTSFSVALTWDGLVFWWGLG 452
            V +G   +VA T +G ++ WG G
Sbjct: 480 NVSSGFQHNVAQTENGDLYSWGCG 503



 Score = 87.4 bits (215), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 33/200 (16%)

Query: 238 GGLLVYGKG---WLGLANTTIQPLPKRV-PLEA-AIVSLSVSKCSEAHVLTVTSEGEVYS 292
           G L  +G+G    LG  ++ +Q  PK+V  L    IV +S+      H + +T  GEV+S
Sbjct: 322 GYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGG---GHSMALTKRGEVFS 378

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG GE+G+LGHG   SQ+     +     K +  +SAG  HS A+  +G ++ WG GD+G
Sbjct: 379 WGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYG 438

Query: 353 RLG-------HGDLKSRHTPTLVTELSDVGA--------------VSCGESHTLVLSQDG 391
            LG        GD+ S   P L+  L++                 VS G  H +  +++G
Sbjct: 439 VLGVSSSLDSLGDINS---PVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENG 495

Query: 392 HTV-WSMGSGNLGKLGHEDT 410
               W  GSGN   L +E+ 
Sbjct: 496 DLYSWGCGSGNRLGLANEEN 515



 Score = 65.1 bits (157), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 38/241 (15%)

Query: 181 TDISVAHSKV---YTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEA--------GQF 229
           T+ S A SK+   YTWG        D  R       +QS P  +  +          G  
Sbjct: 312 TNRSAAISKLGYLYTWGRG------DNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGG 365

Query: 230 CTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTS 286
            +  L   G +  +G+G    LG    T Q +  +        ++ V      H + + +
Sbjct: 366 HSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDT 425

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQ----RRPKLIMGGLY-----------GKRVTQVSAGH 331
            G +++WG G++G LG  ++L        P LI                G+R   VS+G 
Sbjct: 426 NGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGF 485

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA---VSCGESHTLVLS 388
            H+ A TE+G LY+WG G   RLG  + +++  P  + + S+       SCGE  T+++ 
Sbjct: 486 QHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCGEIITIIVE 545

Query: 389 Q 389
           +
Sbjct: 546 K 546


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 30/354 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
           A+  V +WG N + Q+ +      + P   S  +NI+ + AG   +  L S G +  +G 
Sbjct: 221 ANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNNIKSLAAGGNHSLALKSDGTVTAWGY 280

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G +G   T     P  V   + + ++S +  S +H +  +S G ++ WG+  +G LG
Sbjct: 281 NAYGQVGNGATANVLSPIAVSTLSGVTAVS-AGVSHSHAIG-SSNGVIWGWGLNTYGGLG 338

Query: 303 HGNTLSQRRPKLIM--GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +   +++  P  I+   GL G     V+ G  H+  V  DG ++ WG   +G++G G   
Sbjct: 339 NNTKVNRSTPGTILLTSGLQG-----VAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPL 393

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            R TP  ++ L+ + AV+ G +H+L L+ +G TV++ G  N G+LG   T   + P  + 
Sbjct: 394 RRLTPVQLSTLTGIIAVAAGANHSLALAANG-TVFAWGRNNHGQLGDGSTTNRSLPTQVP 452

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L    +  + AG + S+AL +DG V+ WG      LG  + +    +PV V  L   ++
Sbjct: 453 NLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRL-SPVAVHYL--EKV 507

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQ-----CGQDNFSNPVDQ-PSKVVGL 522
           V +S GD+H LA+ Q    +AWGS+  GQ      G   FS  + Q P  V G+
Sbjct: 508 VAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSPLISQIPGIVKGI 561



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 171/371 (46%), Gaps = 39/371 (10%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------------IEAGQFCTFLLD 235
           V++WG N +  + +      + P  Q LP+ ++               I AG   T  L 
Sbjct: 117 VWSWGYNGNSALGN------ASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALK 170

Query: 236 STGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           S G +  +G    G L N T+      V       ++++S    AH L + + G V SWG
Sbjct: 171 SNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDAVAIS-AGAAHSLALRANGAVVSWG 229

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
              +G+LG+G T +   P  + G L    +  ++AG +HS A+  DG +  WG   +G++
Sbjct: 230 ANTYGQLGNGTTTTSASPVGVSG-L--NNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQV 286

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           G+G   +  +P  V+ LS V AVS G SH+  +      +W  G    G LG+      +
Sbjct: 287 GNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRS 346

Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
           TP  I  L    ++ V  G   ++ +  DG V+ WG      +G   + +   TPV ++ 
Sbjct: 347 TPGTI--LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIG-DGTPLRRLTPVQLST 403

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L+   I+ V+ G +H LAL+    V+AWG N  GQ G  + +N    P++V  L  +   
Sbjct: 404 LTG--IIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNR-SLPTQVPNLTGIVA- 459

Query: 529 QICAGSLFSIA 539
            + AG+  S+A
Sbjct: 460 -LAAGATHSLA 469



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 36/369 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           V  WG N + Q+ +        P   S  S +  + AG   +  + S+ G+ ++G G   
Sbjct: 275 VTAWGYNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHAIGSSNGV-IWGWGLNT 333

Query: 247 WLGLANTTI--QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           + GL N T   +  P  + L + +  ++       H + V  +G V++WG   +G++G G
Sbjct: 334 YGGLGNNTKVNRSTPGTILLTSGLQGVA---GGAQHTIYVKGDGTVWAWGSNTYGQIGDG 390

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
             L +  P + +  L G  +  V+AG +HS A+  +G ++ WG  +HG+LG G   +R  
Sbjct: 391 TPLRRLTP-VQLSTLTG--IIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSL 447

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           PT V  L+ + A++ G +H+L L  DG TV++ G  +LG+LG E      +P  +  L K
Sbjct: 448 PTQVPNLTGIVALAAGATHSLALRFDG-TVYAWGRNHLGQLGDETCTDRLSPVAVHYLEK 506

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL------------GLRSSSISFHTPVLVTGLSSH 472
             V  + AG + S+A+  +G  F WG               R S +    P +V G    
Sbjct: 507 --VVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSPLISQIPGIVKG---- 560

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
             + ++ G +H L L      +A G N  GQ G D  +     P  +  L +    ++ A
Sbjct: 561 --IGIAAGANHTLLLEANGTAWACGDNLYGQLG-DGTTTDKSAPVPITTLTNAA--RLAA 615

Query: 533 GSLFSIAYT 541
           G   S A T
Sbjct: 616 GGNTSAALT 624



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 125/274 (45%), Gaps = 26/274 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L V  +G V++ G   HG+LG+G       P  +   L G  V  V+AG+ HS A+  
Sbjct: 7   HTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSN-LTG--VISVAAGYYHSLALKS 63

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   +G LG     +R  P  V  L+ V A++     +  L  DG TVWS G 
Sbjct: 64  DGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDG-TVWSWGY 122

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFR--------VRKVCAGTSFSVALTWDGLVFWWGL 451
                LG+        P  ++  + F         V  + AGT  ++AL  +G V+ WGL
Sbjct: 123 NGNSALGNASPATQKLPAQVQ--QSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWGL 180

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVD------VSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              +SS       L T  ++ Q V+      +S G +H LAL     V +WG+NT GQ G
Sbjct: 181 ---NSSGQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVVSWGANTYGQLG 237

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               +     P  V GL +  ++ + AG   S+A
Sbjct: 238 NGTTTTSA-SPVGVSGLNN--IKSLAAGGNHSLA 268



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 130/326 (39%), Gaps = 73/326 (22%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N + QI D    +   P   S  + I  + AG   +  L + G +  +G+   G
Sbjct: 376 VWAWGSNTYGQIGDGTPLRRLTPVQLSTLTGIIAVAAGANHSLALAANGTVFAWGRNNHG 435

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG  +TT + LP +VP    IV+L+       H L +  +G VY+WG    G+LG    
Sbjct: 436 QLGDGSTTNRSLPTQVPNLTGIVALAAGAT---HSLALRFDGTVYAWGRNHLGQLGDETC 492

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH--------------- 351
             +  P  +    Y ++V  +SAG +HS A+ ++G  + WG  +H               
Sbjct: 493 TDRLSPVAVH---YLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSP 549

Query: 352 --------------------------------------GRLGHGDLKSRHTPTLVTELSD 373
                                                 G+LG G    +  P  +T L++
Sbjct: 550 LISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVPITTLTN 609

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF-------- 425
              ++ G + +  L+ +G TV + G  + G+LG   T   TT  +   LR          
Sbjct: 610 AARLAAGGNTSAALTTNG-TVSTWGLNSSGQLGDNTTASRTT--IAPVLRTVYPTVEVFS 666

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGL 451
            V  + AGT+   A+  DG V  WGL
Sbjct: 667 GVASLGAGTAHLTAVKTDGYVHSWGL 692



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 19/223 (8%)

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLS 388
            G  H+ AV +DG ++  G   HG LG+G      +P  V+ L+ V +V+ G  H+L L 
Sbjct: 3   GGAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTGVISVAAGYYHSLALK 62

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            DG TVW+ G    G LG   T   T  K ++ L    V  + A    S AL  DG V+ 
Sbjct: 63  SDG-TVWAWGLNTYGNLGDNTT--TTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTVWS 119

Query: 449 WGLGLRSSSISFHTPVL----------VTGLSS--HQIVDVSIGDSHVLALSQYNEVYAW 496
           WG    +S++   +P              G+ S    +V ++ G  H LAL     V++W
Sbjct: 120 WGYN-GNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSW 178

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G N+ GQ G    +       + V L D     I AG+  S+A
Sbjct: 179 GLNSSGQLGNGTLATQ-SAAVQAVNLTDAVA--ISAGAAHSLA 218



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 18/193 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCS-RPRLQSLPSNIRHI--EAGQFCTFLLDSTG----- 238
           +   + WG + H Q+ D   G     P +  +P  ++ I   AG   T LL++ G     
Sbjct: 523 NGTAFAWGSDEHGQLCDSGSGSGRFSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWAC 582

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G  +YG+  LG   TT +  P  +        L+    + A    +T+ G V +WG+   
Sbjct: 583 GDNLYGQ--LGDGTTTDKSAPVPITTLTNAARLAAGGNTSA---ALTTNGTVSTWGLNSS 637

Query: 299 GKLGHGNTLSQRRPKLIMGGLYG-----KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G+LG   T S+     ++  +Y        V  + AG +H  AV  DG +++WG  D G+
Sbjct: 638 GQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQ 697

Query: 354 LGHGDLKSRHTPT 366
           +G G L +R  PT
Sbjct: 698 IGDGTLVNRPLPT 710


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 22/313 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           +R +  G   T +L + G +   G    G LG  + +++ L +   L A    +    C 
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLG-QDRSMRKLEQVAALSAH--EIRAVACG 149

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR-RPKLIMGGLYGKRVTQVSAGHSHSAA 336
           EAH L ++  G+V+SWG   +G+LG G     R RPK+I   L    + Q++ G  H  A
Sbjct: 150 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIK-KLATLHIVQIACGAVHCLA 208

Query: 337 VTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           +  +G L++WG    G+LG G     +   P  V+ L  V    V+CG  H++ L+  G 
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSG- 267

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           TV+  G  + G+LG  D      P V++ LR  R++ VC G + + ALT DG VF +G G
Sbjct: 268 TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAG 327

Query: 453 LRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALS-QYNEVYAWGSNTMGQCGQ 506
                     ++   P  V  L    I  +S G  H +A + Q   +Y +G    GQ G 
Sbjct: 328 TYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGN 387

Query: 507 DNFSN---PVDQP 516
               +   PV  P
Sbjct: 388 GTLESSALPVTVP 400



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 124/250 (49%), Gaps = 24/250 (9%)

Query: 189 KVYTWGCNLHHQI----LDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLV 242
           +V++WGCN + Q+     +E R    RP+ ++ L + +I  I  G      L + G L  
Sbjct: 161 QVFSWGCNRNGQLGCGTEEESR---LRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 217

Query: 243 YG---KGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           +G    G LGL   +T  + LP+RV      V L++  C   H + +T  G V+ WG   
Sbjct: 218 WGGNASGQLGLGRDSTGNERLPRRVS-HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 276

Query: 298 HGKLGHGNTLSQRRPKL---IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G+LG    LS +R +L   ++  L  +R+  V  G +H+AA+T DG ++T+G G +G+L
Sbjct: 277 CGQLG----LSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQL 332

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG   +   P  V EL  + +  +SCG  HT+  +     ++  G G  G+LG+     
Sbjct: 333 GHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLES 392

Query: 413 VTTPKVIEAL 422
              P  +  L
Sbjct: 393 SALPVTVPGL 402



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 20/198 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTG 238
           + ++++WG N   Q L   R      RL   P  + H        +  G   +  L  +G
Sbjct: 212 NGELFSWGGNASGQ-LGLGRDSTGNERL---PRRVSHLVGVPLALVACGAMHSVGLTPSG 267

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            + V+G+   G LGL++   +  P  + PL +  +      C E H   +T++G V+++G
Sbjct: 268 TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVC--CGENHTAALTADGGVFTFG 325

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT-EDGLLYTWGEGDHGR 353
            G +G+LGHG  +++  P+ ++  L G  ++Q+S G  H+ A   + G LY +G G  G+
Sbjct: 326 AGTYGQLGHGVKVNEAVPRRVVE-LMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQ 384

Query: 354 LGHGDLKSRHTPTLVTEL 371
           LG+G L+S   P  V  L
Sbjct: 385 LGNGTLESSALPVTVPGL 402



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 395 WSMG-SGNLGKLGHEDTGKVTTP-KVIEALRKF---RVRKVCAGTSFSVALTWDGLVFWW 449
           W +G +G LG    +D     TP    E +R+F    VR+V  G   ++ L  +G V+  
Sbjct: 56  WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 115

Query: 450 G---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           G    G      S      V  LS+H+I  V+ G++H LALS   +V++WG N  GQ G 
Sbjct: 116 GANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC 175

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                   +P  +  L  + + QI  G++  +A
Sbjct: 176 GTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 208



 Score = 49.3 bits (116), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           V+ WG N   Q+ L + R +     L+ L S  I+H+  G+  T  L + GG+  +G G 
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGT 328

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE-GEVYSWGVGEHGKLGH 303
              LG      + +P+RV +E    ++S   C   H +    + G +Y +G+G  G+LG+
Sbjct: 329 YGQLGHGVKVNEAVPRRV-VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGN 387

Query: 304 GNTLSQRRPKLIMGGLYG 321
           G   S   P  + G  +G
Sbjct: 388 GTLESSALPVTVPGLWHG 405


>gi|405968936|gb|EKC33959.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 1493

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 36/280 (12%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           A+ T   LP ++ +  A V        E HV+ VT+E +VYSWG G+ G+LGHGN  S+ 
Sbjct: 539 ASMTPIELPPKIKIRHAAVG-------EDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKM 591

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           +P+L+   L GK +++   G   S   +++G++ T G+G  G LGHGD  S + P L+  
Sbjct: 592 KPELVQ-SLNGKSISRACCGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIET 650

Query: 371 L--SDVGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFR 426
           L   DV A+SCG  H +V+  +G  + W  G+ G LG LG ED      P+ +       
Sbjct: 651 LLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLG-LGTEDNH--CQPQELRIEEPVV 707

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGL---------------RSSSISFHTPVL 465
           +R V  G   ++ LT  G V+  G      LGL               ++     + P  
Sbjct: 708 IRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSNVPTP 767

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           V  L+ H+++ +S+G  H   + +   +Y +G N+ GQ G
Sbjct: 768 VRALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLG 807



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 24/201 (11%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG 380
           ++   + G  H   VT +  +Y+WG GD G+LGHG+++S+  P LV  L+   +    CG
Sbjct: 551 KIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKMKPELVQSLNGKSISRACCG 610

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           E  ++  S +G  V + G G  G LGH DT     P++IE L    V  +  G+   V +
Sbjct: 611 EGFSIFASDNG-IVLTCGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAISCGSKHVVVV 669

Query: 441 TWDGLVFWWGLGL-------------RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             +G V  WG G              +   +    PV+        I DV  G    + L
Sbjct: 670 GSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVV--------IRDVFCGVDGTMFL 721

Query: 488 SQYNEVYAWGSNTMGQCGQDN 508
           +    VYA GSN+  + G +N
Sbjct: 722 TDVGSVYACGSNSDNKLGLNN 742



 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 37/306 (12%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK-- 275
           IRH   G+    ++ +   +  +G   KG LG  N   +  P+ V    ++   S+S+  
Sbjct: 552 IRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKMKPELV---QSLNGKSISRAC 608

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C E   +  +  G V + G G  G LGHG+TLS  RP+LI   L    V  +S G  H  
Sbjct: 609 CGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIET-LLSLDVIAISCGSKHVV 667

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT--LVTELSDVGAVSCGESHTLVLSQDGHT 393
            V  +G + TWG G  GRLG G   +   P    + E   +  V CG   T+ L+  G +
Sbjct: 668 VVGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVVIRDVFCGVDGTMFLTDVG-S 726

Query: 394 VWSMGSGNLGKLG----------------HEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           V++ GS +  KLG                  +      P  + AL + RV  +  G   +
Sbjct: 727 VYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSNVPTPVRALARHRVLGISMGACHT 786

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
             +   G ++ +G      LG+  +  S   PV V  +   + V V  G+ + +  +  N
Sbjct: 787 AVIVEPGHIYTFGKNSEGQLGIGDTKPS-RAPVEVKAM--LESVRVQCGNHYTVCSTTSN 843

Query: 492 EVYAWG 497
           E+Y WG
Sbjct: 844 ELYYWG 849



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 89/219 (40%), Gaps = 36/219 (16%)

Query: 192 TWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           T GC  H   L      C RPRL ++L S ++  I  G     ++ S G +L +G    G
Sbjct: 630 TSGCLGHGDTL-----SCYRPRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADG 684

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LGL        P+ + +E  +V   V  C     + +T  G VY+ G     KLG  N 
Sbjct: 685 RLGLGTEDNHCQPQELRIEEPVVIRDVF-CGVDGTMFLTDVGSVYACGSNSDNKLGLNN- 742

Query: 307 LSQRRPKLIMG--------------------GLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
               R   IM                      L   RV  +S G  H+A + E G +YT+
Sbjct: 743 ----RQGFIMAMKNIFTKTEVEGSNVPTPVRALARHRVLGISMGACHTAVIVEPGHIYTF 798

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTL 385
           G+   G+LG GD K    P  V  + +   V CG  +T+
Sbjct: 799 GKNSEGQLGIGDTKPSRAPVEVKAMLESVRVQCGNHYTV 837



 Score = 45.1 bits (105), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +I   ++G+ HV+ ++   +VY+WGS   GQ G  N  + + +P  V  L    + + C 
Sbjct: 551 KIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKM-KPELVQSLNGKSISRACC 609

Query: 533 GSLFSI 538
           G  FSI
Sbjct: 610 GEGFSI 615


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 19/257 (7%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            C + H   +T+ G VY+WG  ++G+LG G+      P+LI   L  + V  +S G  H+ 
Sbjct: 884  CGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITS-LANENVITLSCGQFHTL 941

Query: 336  AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
            A+TE G ++ WG G HG+LG G++  +  P  V  L D  +  ++ G  H+LVLS  G  
Sbjct: 942  ALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQ- 1000

Query: 394  VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV-------RKVCAGTSFSVALTWDGLV 446
            ++S GSG  G+LG  +T K + P +I+ + +  +         +  G   S  LT  G V
Sbjct: 1001 IFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGV 1060

Query: 447  FWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNT 500
            + WG  L              P  +   ++ +   +S G     A   Q  +++ WGSN+
Sbjct: 1061 YTWGRSLDGQLGNGGHKEVTAPTQINE-NTFKADCISCGCEFTAAQEKQTGKIFCWGSNS 1119

Query: 501  MGQCGQDNFSNPVDQPS 517
            +GQ    N + PV + +
Sbjct: 1120 VGQVRVTNLAIPVKESA 1136



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 19/251 (7%)

Query: 272  SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR-PKLI-MGGLYGKRVTQVSA 329
            SV  C   H   + + G +Y+WG    G LG G T+S+   P  I +   +   V  V+ 
Sbjct: 826  SVLNCGYGHTALIRN-GTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVAC 884

Query: 330  GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVL 387
            G +H+ A+T +G +Y WG   +G+LG GD+     P L+T L+  +V  +SCG+ HTL L
Sbjct: 885  GKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLAL 943

Query: 388  SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
            ++ G  V++ G G  G+LG  +      P  +  L+   ++ + AG   S+ L+  G +F
Sbjct: 944  TEKGQ-VFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVLSDKGQIF 1002

Query: 448  WWGLGL-----RSSSISFHTPVLVTGLSSHQIV-------DVSIGDSHVLALSQYNEVYA 495
             +G G+       ++     PVL+ G+S   I+        +S G  H   L+    VY 
Sbjct: 1003 SFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGVYT 1062

Query: 496  WGSNTMGQCGQ 506
            WG +  GQ G 
Sbjct: 1063 WGRSLDGQLGN 1073



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 14/201 (6%)

Query: 319  LYGKRVTQV-SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELS---- 372
            L+ K++  V + G+ H+A +  +G +YTWG+   G LG G   SRH+ P+ ++ L+    
Sbjct: 819  LFNKKINSVLNCGYGHTALI-RNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKL 877

Query: 373  DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            +V  V+CG++HT  L+ +G   W  G    G+LG  D  +   P++I +L    V  +  
Sbjct: 878  EVLYVACGKNHTTALTNNGVYAW--GCSKYGQLGLGDVYESPYPRLITSLANENVITLSC 935

Query: 433  GTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            G   ++ALT  G VF WG G+       +      PV V  L    I D++ G  H L L
Sbjct: 936  GQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSLVL 995

Query: 488  SQYNEVYAWGSNTMGQCGQDN 508
            S   +++++GS   GQ G  N
Sbjct: 996  SDKGQIFSFGSGVFGQLGTGN 1016



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 15/235 (6%)

Query: 184  SVAHSKVYTWGCNLHHQI-LDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGL 240
            ++ ++ VY WGC+ + Q+ L +V  +   PRL  SL + N+  +  GQF T  L   G +
Sbjct: 891  ALTNNGVYAWGCSKYGQLGLGDVY-ESPYPRLITSLANENVITLSCGQFHTLALTEKGQV 949

Query: 241  LVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
              +G    G LGL N   Q LP  V      V   ++     H L ++ +G+++S+G G 
Sbjct: 950  FAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAA-GHGHSLVLSDKGQIFSFGSGV 1008

Query: 298  HGKLGHGNTLSQRRPKLIMGG------LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
             G+LG GNT     P LI G       +       +S G  HSA +T  G +YTWG    
Sbjct: 1009 FGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLD 1068

Query: 352  GRLGHGDLKSRHTPTLVTELS-DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            G+LG+G  K    PT + E +     +SCG   T    +    ++  GS ++G++
Sbjct: 1069 GQLGNGGHKEVTAPTQINENTFKADCISCGCEFTAAQEKQTGKIFCWGSNSVGQV 1123


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 18/263 (6%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  ++    +PK+V + +    +S+S  S  H+L  T +GE+++WG   + +LG+G T 
Sbjct: 54  LGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P L+   L  ++VT+V+ G  HS A+T+ G +Y WG  + G++G G   ++ TP  
Sbjct: 114 QGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRR 173

Query: 368 VTE-LSDVGAVS--CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           V+  L +  AVS  CG++ +L +  +G  V+  G    G+LG  + G   TP  + AL+ 
Sbjct: 174 VSSCLQNRVAVSIVCGQTSSLAVVDNGE-VYGWGYNGNGQLGLGNNGNQLTPCRLVALQG 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVD 476
             V++V +G + S+ALT +GL++ WG         G +S+ +S   PV +      +IV+
Sbjct: 233 LCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS---PVQIM-TEKERIVE 288

Query: 477 VSIGDS-HV-LALSQYNEVYAWG 497
           ++   S H   A +Q  +VY WG
Sbjct: 289 IAACHSTHTSAAKTQSGQVYMWG 311



 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 14/246 (5%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSA 335
           S    + +TS+ EVY++G+     LG G++     PK +   L G++V  +S G   H  
Sbjct: 30  SANEAIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKV-DILSGRKVVSLSYGSGPHIL 88

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGH 392
             TEDG L+ WG   + +LG+G       P LV+       V  V+CG  H++ L+  G 
Sbjct: 89  LATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGE 148

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR-KVCAGTSFSVALTWDGLVFWWG- 450
            V++ G  N G++G   T    TP+ + +  + RV   +  G + S+A+  +G V+ WG 
Sbjct: 149 -VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGY 207

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL ++     TP  +  L    +  V  G +H LAL+    +YAWG+NT GQ G
Sbjct: 208 NGNGQLGLGNNGNQL-TPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLG 266

Query: 506 QDNFSN 511
             N SN
Sbjct: 267 TGNKSN 272



 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR---HIEAGQFCTFLLDSTG---GLLV 242
           +VY WG N   Q+          PR  S     R    I  GQ  +  +   G   G   
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGY 207

Query: 243 YGKGWLGLANTTIQPLPKR-VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G G LGL N   Q  P R V L+   V   VS    AH L +T EG +Y+WG   +G+L
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVS--GYAHSLALTDEGLLYAWGANTYGQL 265

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           G GN  +Q  P  IM     +R+ +++A HS   SAA T+ G +Y WG+
Sbjct: 266 GTGNKSNQLSPVQIM--TEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I  + V   S +  L VT   EV+ +G+     LG G+  S   PK + G L GK++ 
Sbjct: 19  ASIRKVCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S +  L VT   EV+ +G+     LG G+  S   PK + G L GK++ 
Sbjct: 19  ASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 111/217 (51%), Gaps = 7/217 (3%)

Query: 240 LLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           + V+G  +   LG  +     +PK++         S+S  S  HVL  T +G VY+WG  
Sbjct: 43  VFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHN 102

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            + +LG+G T     P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 357 GDLKSRHTPTLVTE---LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           G   ++ TP  VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G  
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQ 221

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            TP  + AL    V ++  G + ++ALT +GL++ WG
Sbjct: 222 LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score =  100 bits (250), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.9 bits (180), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 162/354 (45%), Gaps = 23/354 (6%)

Query: 186 AHSKVYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
           A +++Y WG   H Q+    +++ +         +  S I+ +  G   T  L S+G + 
Sbjct: 3   AGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVY 62

Query: 242 VYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
             G      LG    T +PL     L+  +V ++   C   H + ++  G+V SWG  + 
Sbjct: 63  ACGSNDHSQLGHDLPTKRPLLIPELLDYVVVQIA---CGSRHSMALSEWGQVLSWGDNDC 119

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG- 357
           G+LG        +   I+  L  K V Q++ G++HS A+T  G LY+WG   +G+LG   
Sbjct: 120 GQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNT 179

Query: 358 --DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
             ++   + P  +T L    V A++CG +H+ ++S+    V+  G  N G+LG  D    
Sbjct: 180 PKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSS-AVFGWGRNNCGQLGLNDETSR 238

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTG 468
           + P  ++ LR   VR V  G  FSV LT +G VF  G G           +   P +V  
Sbjct: 239 SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMVME 298

Query: 469 LSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           L    I  V+ G+ H LAL      VY +G  + GQ G  + +  +  P  V+G
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRS-TKSLTLPQVVIG 351



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 18/271 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQR--RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           +T+  E+Y WG   HG+LG G    ++   P  +        + QV+ GH H+  +T  G
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQV-PWTPDSAIKQVACGHRHTLFLTSSG 59

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGS 399
            +Y  G  DH +LGH DL ++  P L+ EL D  V  ++CG  H++ LS+ G  V S G 
Sbjct: 60  RVYACGSNDHSQLGH-DLPTKR-PLLIPELLDYVVVQIACGSRHSMALSEWGQ-VLSWGD 116

Query: 400 GNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
            + G+LG   D   V  PK++  L    V ++  G + S+ALT  G ++ WG      LG
Sbjct: 117 NDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           + +     H+  PV +T L    +  ++ G +H   +S+ + V+ WG N  GQ G ++  
Sbjct: 177 VNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLND-E 235

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                P+++  L  + VR +  G  FS+  T
Sbjct: 236 TSRSYPTQLKTLRTLGVRFVACGDEFSVFLT 266


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 136/270 (50%), Gaps = 22/270 (8%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           A +S+ +  C   HVL + + G++ SWG GE G+LGH +      P +I   L  +RV +
Sbjct: 107 AGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSII-DELASQRVKE 165

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHT 384
           V+ G + SAA+ E G LYTWG   +G+LG GD  S   P ++  ++   V  ++CG +H 
Sbjct: 166 VACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHI 225

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
           +VL+     V++ G+ + G+LGH    K    PK +  +    ++++ AG + S  +T  
Sbjct: 226 VVLTTS-RDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSF 284

Query: 444 GLVFWWGLG---------LRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEV 493
           G ++ WG G         + S  I    P L++ L    Q   +  G   ++A++    V
Sbjct: 285 GDIYTWGRGDFGQLGHGDMESKDI----PTLLSPLDPKTQASLIVSGADFIMAMTYSGAV 340

Query: 494 YAWGSNTMGQCGQD---NFSNPVDQPSKVV 520
           Y+WG N  GQ G     ++S     PS V+
Sbjct: 341 YSWGRNCFGQLGHGVDMHYSKSNRFPSDVI 370



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 50/372 (13%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           A  K+ +WG     Q+        S P +  +     ++ +  G   +  L   G L  +
Sbjct: 126 ASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTW 185

Query: 244 G---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G    G LG  + T   +P+ +P +    V L    C  AH++ +T+  +VY+WG   +G
Sbjct: 186 GCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMA--CGAAHIVVLTTSRDVYTWGNNSYG 243

Query: 300 KLGHGNTLS---QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +LGHG       Q +   +M GL    + Q+ AG +HS  +T  G +YTWG GD G+LGH
Sbjct: 244 QLGHGFRKKHCLQPKSVRVMSGL---DIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGH 300

Query: 357 GDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH------ 407
           GD++S+  PTL++ L   +    +  G    + ++  G  V+S G    G+LGH      
Sbjct: 301 GDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSG-AVYSWGRNCFGQLGHGVDMHY 359

Query: 408 ----EDTGKVTTPKVI------EALRKFRVRKVCAGTSFSVALT-WDGLVFWWG------ 450
                    V +PK+I      E      +  +  G+   +A+T     +F WG      
Sbjct: 360 SKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQ 419

Query: 451 LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYN--------EVYAWGSNTM 501
           LGL     SF   P  V  +    ++  +  ++H + ++           +V++WG  + 
Sbjct: 420 LGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSF 479

Query: 502 GQCGQDNFSNPV 513
           GQ G  +   PV
Sbjct: 480 GQLGYGSGKVPV 491



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 24/259 (9%)

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           HG+    +T + +RP+ ++  L G  +  ++ G  H  A+   G + +WG G+ G+LGH 
Sbjct: 89  HGRF---STYNSQRPQEVVS-LAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHA 144

Query: 358 DLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
                 TP+++ EL+   V  V+CG + +  L + G  +++ G    G+LG  D      
Sbjct: 145 SFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQ-LYTWGCNRYGQLGQGDRTSSAI 203

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           P+++ ++    V  +  G +  V LT    V+ WG      LG          P  V  +
Sbjct: 204 PRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVM 263

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS-----------NPVDQPSK 518
           S   I  +  G++H   ++ + ++Y WG    GQ G  +             +P  Q S 
Sbjct: 264 SGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASL 323

Query: 519 VVGLEDVCVRQICAGSLFS 537
           +V   D  +    +G+++S
Sbjct: 324 IVSGADFIMAMTYSGAVYS 342



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 12/173 (6%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           ++CG  H L L   G  + S G G  G+LGH      +TP +I+ L   RV++V  G +F
Sbjct: 114 ITCGSDHVLALDASG-KIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAF 172

Query: 437 SVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
           S AL   G ++ WG         G R+SS     P ++  ++   +  ++ G +H++ L+
Sbjct: 173 SAALMEGGQLYTWGCNRYGQLGQGDRTSSA---IPRMLPSMNHRHVHLMACGAAHIVVLT 229

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              +VY WG+N+ GQ G         QP  V  +  + ++QI AG   S   T
Sbjct: 230 TSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMT 282


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 145/313 (46%), Gaps = 22/313 (7%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           +R +  G   T +L + G +   G    G LG  + +++ L +   L A    +    C 
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLG-QDRSMRKLEQVAALSAH--EIRAVACG 143

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR-RPKLIMGGLYGKRVTQVSAGHSHSAA 336
           EAH L ++  G+V+SWG   +G+LG G     R RPK+I   L    + Q++ G  H  A
Sbjct: 144 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIK-KLATLHIVQIACGAVHCLA 202

Query: 337 VTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           +  +G L++WG    G+LG G     +   P  V+ L  V    V+CG  H++ L+  G 
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSG- 261

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           TV+  G  + G+LG  D      P V++ LR  R++ VC G + + ALT DG VF +G G
Sbjct: 262 TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAG 321

Query: 453 LRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLALS-QYNEVYAWGSNTMGQCGQ 506
                     ++   P  V  L    I  +S G  H +A + Q   +Y +G    GQ G 
Sbjct: 322 TYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGN 381

Query: 507 DNFSN---PVDQP 516
               +   PV  P
Sbjct: 382 GTLESSALPVTVP 394



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 124/250 (49%), Gaps = 24/250 (9%)

Query: 189 KVYTWGCNLHHQI----LDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLV 242
           +V++WGCN + Q+     +E R    RP+ ++ L + +I  I  G      L + G L  
Sbjct: 155 QVFSWGCNRNGQLGCGTEEESR---LRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 211

Query: 243 YG---KGWLGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           +G    G LGL   +T  + LP+RV      V L++  C   H + +T  G V+ WG   
Sbjct: 212 WGGNASGQLGLGRDSTGNERLPRRVS-HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 270

Query: 298 HGKLGHGNTLSQRRPKL---IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
            G+LG    LS +R +L   ++  L  +R+  V  G +H+AA+T DG ++T+G G +G+L
Sbjct: 271 CGQLG----LSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQL 326

Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GHG   +   P  V EL  + +  +SCG  HT+  +     ++  G G  G+LG+     
Sbjct: 327 GHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLES 386

Query: 413 VTTPKVIEAL 422
              P  +  L
Sbjct: 387 SALPVTVPGL 396



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 20/198 (10%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTG 238
           + ++++WG N   Q L   R      RL   P  + H        +  G   +  L  +G
Sbjct: 206 NGELFSWGGNASGQ-LGLGRDSTGNERL---PRRVSHLVGVPLALVACGAMHSVGLTPSG 261

Query: 239 GLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
            + V+G+   G LGL++   +  P  + PL +  +      C E H   +T++G V+++G
Sbjct: 262 TVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVC--CGENHTAALTADGGVFTFG 319

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT-EDGLLYTWGEGDHGR 353
            G +G+LGHG  +++  P+ ++  L G  ++Q+S G  H+ A   + G LY +G G  G+
Sbjct: 320 AGTYGQLGHGVKVNEAVPRRVVE-LMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQ 378

Query: 354 LGHGDLKSRHTPTLVTEL 371
           LG+G L+S   P  V  L
Sbjct: 379 LGNGTLESSALPVTVPGL 396



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 8/153 (5%)

Query: 395 WSMG-SGNLGKLGHEDTGKVTTP-KVIEALRKF---RVRKVCAGTSFSVALTWDGLVFWW 449
           W +G +G LG    +D     TP    E +R+F    VR+V  G   ++ L  +G V+  
Sbjct: 50  WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 109

Query: 450 G---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           G    G      S      V  LS+H+I  V+ G++H LALS   +V++WG N  GQ G 
Sbjct: 110 GANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGC 169

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
                   +P  +  L  + + QI  G++  +A
Sbjct: 170 GTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 202



 Score = 49.3 bits (116), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGKG- 246
           V+ WG N   Q+ L + R +     L+ L S  I+H+  G+  T  L + GG+  +G G 
Sbjct: 263 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGT 322

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSE-GEVYSWGVGEHGKLGH 303
              LG      + +P+RV +E    ++S   C   H +    + G +Y +G+G  G+LG+
Sbjct: 323 YGQLGHGVKVNEAVPRRV-VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGN 381

Query: 304 GNTLSQRRPKLIMGGLYG 321
           G   S   P  + G  +G
Sbjct: 382 GTLESSALPVTVPGLWHG 399


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 128/250 (51%), Gaps = 13/250 (5%)

Query: 211 RPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           RPRL      I  + + AG   T  L   G +   G    G LG  +T  +P PK + + 
Sbjct: 206 RPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRV 324
           +++V ++      +++L+VT  G VYS+G G +  LGHG    + +P+ I      G  +
Sbjct: 266 SSVVQIAAGP---SYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHI 322

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            +VSAG  H+ A+  +G +YTWG+G  G LGHGD   + TP L+T L +  V  V   + 
Sbjct: 323 VRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKR 382

Query: 383 HTLVLSQDG--HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            T VL   G  +   SMG G+LG L    + KV  P++++ LR   V ++  G   +V +
Sbjct: 383 KTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVI 442

Query: 441 TWDGLVFWWG 450
           T  G +F +G
Sbjct: 443 TSRGQIFGFG 452



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 132/254 (51%), Gaps = 18/254 (7%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +T +G VY+ G   HG+LGHG+T  +  PK+I        V Q++AG S+  +VTE+G +
Sbjct: 231 LTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIE---VLSSVVQIAAGPSYILSVTENGTV 287

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGS 399
           Y++G G +  LGHG+      P  + +    G     VS G+ H + L  +G+ V++ G 
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGY-VYTWGK 346

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
           G  G LGH D  + TTP+++ +L+   V +VCA    +  L   G V+ +G      LG 
Sbjct: 347 GYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGF 406

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             R  S     P ++  L +H +  +S G  H + ++   +++ +G N   Q G D   +
Sbjct: 407 LDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRS 466

Query: 512 PVDQPSKVVGLEDV 525
            ++ P+++  ++DV
Sbjct: 467 CLE-PTEIF-IKDV 478



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 143/309 (46%), Gaps = 18/309 (5%)

Query: 246 GWLGLANTTIQPLP-KRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G LG  + T Q +   R+  P  A +V +S S     H   V   GEV++ G       G
Sbjct: 140 GVLGQGSETTQCVAFTRIDFPPLARVVHVSASF---NHAAFVMQSGEVFTCGDNSSSCCG 196

Query: 303 HGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           H +T     RP+L+   L G    QV+AG + +  +T  G +YT G   HG+LGHGD + 
Sbjct: 197 HRDTTRPIFRPRLVES-LKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQD 255

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           R TP ++  LS V  ++ G S+ L ++++G TV+S GSG    LGH +      P+ I+ 
Sbjct: 256 RPTPKMIEVLSSVVQIAAGPSYILSVTENG-TVYSFGSGANFCLGHGEQHDELQPRAIQK 314

Query: 422 LRK--FRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQI 474
            R+    + +V AG   +VAL  +G V+ WG G          I   TP L+T L +  +
Sbjct: 315 FRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLV 374

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQICA 532
           V V         L     VY +GS   G  G      S+ V +P  +  L    V QI  
Sbjct: 375 VQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQIST 434

Query: 533 GSLFSIAYT 541
           G   ++  T
Sbjct: 435 GLYHTVVIT 443



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 60/236 (25%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           VYT G N H Q+          P++  + S++  I AG      +   G +  +G G   
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANF 296

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
               G  +  +QP   +      I  + VS   E H + + S G VY+WG G  G LGHG
Sbjct: 297 CLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDE-HAVALDSNGYVYTWGKGYCGALGHG 355

Query: 305 NTLSQRRPKLIM-----------------------GGLYG-------------------- 321
           + + +  P+L+                        G +YG                    
Sbjct: 356 DEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKV 415

Query: 322 -----------KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
                        V+Q+S G  H+  +T  G ++ +G+ +  +LGH  L+S   PT
Sbjct: 416 LKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPT 471


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 128/250 (51%), Gaps = 13/250 (5%)

Query: 211 RPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           RPRL      I  + + AG   T  L   G +   G    G LG  +T  +P PK + + 
Sbjct: 206 RPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRV 324
           +++V ++      +++L+VT  G VYS+G G +  LGHG    + +P+ I      G  +
Sbjct: 266 SSVVQIAAGP---SYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHI 322

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGESH 383
            +VSAG  H+ A+  +G +YTWG+G  G LGHGD   + TP L+T L +  AV  C    
Sbjct: 323 VRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKR 382

Query: 384 -TLVLSQDG--HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            T VL   G  +   SMG G+LG L    + KV  P++++ LR   V ++  G   +V +
Sbjct: 383 KTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVI 442

Query: 441 TWDGLVFWWG 450
           T  G +F +G
Sbjct: 443 TSRGQIFGFG 452



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 32/316 (10%)

Query: 246 GWLGLANTTIQ----------PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           G LG  + T Q          PLP+ V + A+            H   V   GEV++ G 
Sbjct: 140 GVLGQGSETTQCVAFTRIDSPPLPRVVHVSASF----------NHAAFVMQSGEVFTCGD 189

Query: 296 GEHGKLGHGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
                 GH +T     RP+L+   L G    QV+AG + +  +T  G +YT G   HG+L
Sbjct: 190 NSSSCCGHRDTTRPIFRPRLVES-LKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQL 248

Query: 355 GHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
           GHGD + R TP ++  LS V  ++ G S+ L ++++G TV+S GSG    LGH +     
Sbjct: 249 GHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENG-TVYSFGSGANFCLGHGEQHDEL 307

Query: 415 TPKVIEALRK--FRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVT 467
            P+ I+  R+    + +V AG   +VAL  +G V+ WG G          I   TP L+T
Sbjct: 308 QPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLT 367

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDV 525
            L +   V V         L     VY +GS   G  G      S+ V +P  +  L   
Sbjct: 368 SLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAH 427

Query: 526 CVRQICAGSLFSIAYT 541
            V QI  G   ++  T
Sbjct: 428 HVSQISTGLYHTVVIT 443



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 126/248 (50%), Gaps = 17/248 (6%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +T +G VY+ G   HG+LGHG+T  +  PK+I        V Q++AG S+  +VTE+G +
Sbjct: 231 LTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIE---VLSSVVQIAAGPSYILSVTENGTV 287

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGS 399
           Y++G G +  LGHG+      P  + +    G     VS G+ H + L  +G  V++ G 
Sbjct: 288 YSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGF-VYTWGK 346

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
           G  G LGH D  + TTP+++ +L+     +VCA    +  L   G V+ +G      LG 
Sbjct: 347 GYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGF 406

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             R  S     P ++  L +H +  +S G  H + ++   +++ +G N   Q G D   +
Sbjct: 407 LDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRS 466

Query: 512 PVDQPSKV 519
            ++ P+++
Sbjct: 467 CLE-PTQI 473



 Score = 57.4 bits (137), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 60/238 (25%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
           VYT G N H Q+          P++  + S++  I AG      +   G +  +G G   
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSVVQIAAGPSYILSVTENGTVYSFGSGANF 296

Query: 247 --WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
               G  +  +QP P +      I  + VS   E H + + S G VY+WG G  G LGHG
Sbjct: 297 CLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDE-HAVALDSNGFVYTWGKGYCGALGHG 355

Query: 305 NTLSQRRPKLIM-----------------------GGLYG-------------------- 321
           + + +  P+L+                        G +YG                    
Sbjct: 356 DEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKV 415

Query: 322 -----------KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
                        V+Q+S G  H+  +T  G ++ +G+ +  +LGH  L+S   PT +
Sbjct: 416 LKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQI 473


>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 531

 Score =  117 bits (294), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT + EV+ +G+     LG G+  S   PK + G L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N ++    +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLNPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   +  P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLNPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 84/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   + +    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLNPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  117 bits (294), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 170/393 (43%), Gaps = 38/393 (9%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ---PLPKRVPLEAAIVSLSVSKC 276
           +++ I  G     L+   G +  +G+G  G     I      PK V     I + SV+ C
Sbjct: 321 DVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVA-C 379

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKL--GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
            E     +T  GEVY+WG    G       N+ S+  P+ + G L G  ++ V+ G  H+
Sbjct: 380 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 439

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVL----- 387
           A V+  G L+T+G+G  G LGHG+L S   P  V  L+   V +V+CG  HT  +     
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMI 499

Query: 388 ------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
                 S  G  +++ G G+ GKLGH D  +   P  +  L      +V  G   +V LT
Sbjct: 500 DRFKFKSAVG-KLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLT 558

Query: 442 WDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
             G V+  G  +       SS      ++   L    +  +S G  HV +L+    VY W
Sbjct: 559 NMGRVYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTW 618

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPL 556
           G    GQ G  + S+  + P+ V  L D  V  I  GS F+ A  +   + +++S+    
Sbjct: 619 GKGAHGQLGLGD-SDDRNLPTFVEALGDKQVESIACGSNFTAAICL---HRSITSSDQSS 674

Query: 557 CVDVR-PHTFTLIREFLEQYSACFETGDYIPFC 588
           C   + P  FT       +   C+  G Y  FC
Sbjct: 675 CYGCKLPFGFT------RKKHNCYHCGLY--FC 699



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 72/325 (22%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI--RHIEAGQFCTFLLDSTGGLLVYG 244
           H ++++WG     ++  ++      P+L    + I  + +  G++ T  L   G +  +G
Sbjct: 338 HGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYTWG 397

Query: 245 KGWLGL-----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
               G       N+  + LP+++      +S+S   C E H   V++ G ++++G G  G
Sbjct: 398 DSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGTFG 457

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-----------GLLYTWGE 348
            LGHGN +S  +PK +   L G  V  V+ G  H+AA+ +            G L+TWG+
Sbjct: 458 ALGHGNLISLSQPKEVES-LNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGD 516

Query: 349 GDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT------------- 393
           GD G+LGHGD + +  PT V  L   D   VSCG   T+ L+  G               
Sbjct: 517 GDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGN 576

Query: 394 --------------------------------------VWSMGSGNLGKLGHEDTGKVTT 415
                                                 V++ G G  G+LG  D+     
Sbjct: 577 LSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNL 636

Query: 416 PKVIEALRKFRVRKVCAGTSFSVAL 440
           P  +EAL   +V  +  G++F+ A+
Sbjct: 637 PTFVEALGDKQVESIACGSNFTAAI 661



 Score = 43.1 bits (100), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLS 470
           PK++E+     V+ +  G   +  +T  G +F WG G         ++    P LV  L+
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 370

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG---QCGQDNFSNPVDQPSKVVG-LEDVC 526
                 V+ G+    AL++  EVY WG +  G    C +++ S  +  P K+ G L+ + 
Sbjct: 371 GIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWL--PQKLSGPLKGIS 428

Query: 527 VRQICAG 533
           +  +  G
Sbjct: 429 ISNVACG 435


>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Papio anubis]
 gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
           protein 1 [Macaca fascicularis]
 gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
          Length = 531

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S +  L VT + EV+ +G+     LG G+  S   PK + G L GK++ 
Sbjct: 19  ASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LSGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++   +     S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|166240420|ref|XP_640165.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
 gi|165988589|gb|EAL66176.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 919

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 36/355 (10%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG---- 238
           +++  + +Y WG  L   +  +   K +        S     E GQ    +L  TG    
Sbjct: 158 MTMEQTSIYQWGQILTSSLTLKSCAKATNMLFNDEISAPIQTEFGQNYNLILTDTGAVYS 217

Query: 239 -GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            GL  YGK   G        +P ++ LE +   +    C   H L +   G+VYSWG G 
Sbjct: 218 SGLCSYGK--TGHKKKRDVLIPTQI-LELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGA 274

Query: 298 HGKLGHGNTLS-QRRPKLI-MGGLYGKR--VTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G+LG GN  S    P LI +   +G     T ++AG  +S  +  +G +Y++G   H +
Sbjct: 275 SGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYK 334

Query: 354 LGH----GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--- 406
           LG+    G L  + TP  +  +  + +++C   H++ L   G  V++ GS   G+LG   
Sbjct: 335 LGYKECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGR-VYTCGSSTNGRLGRAI 393

Query: 407 ------HEDTGKVTTPKVIEALRKFRV-RKVCAGTSFSVALTWDGLVFWWGLGLRSS--- 456
                 + +   +T  K    L +  V +++  GT+F+  L+  G ++ WG+  +S    
Sbjct: 394 SSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGL 453

Query: 457 ------SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                 S  +  P LVT L+ + I   ++GD HV+ALS   EV+ +G N+  QCG
Sbjct: 454 INLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCG 508



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 30/238 (12%)

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESH 383
           Q   G +++  +T+ G +Y+ G   +G+ GH   +    PT + ELS+  + +++CG  H
Sbjct: 198 QTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHH 257

Query: 384 TLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVC----AGTSFSV 438
           +L +   G  V+S G+G  G+LG   D   V TP +I  + +F   ++     AG   S+
Sbjct: 258 SLAMDDLGQ-VYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSM 316

Query: 439 ALTWDGLVFWWG------LGLR--SSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            L  +G V+ +G      LG +    ++ F  TP  +  +   Q+  ++    H + L  
Sbjct: 317 ILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSI--LQMKSIACASWHSVFLDL 374

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKV----------VGLEDVCVRQICAGSLFS 537
              VY  GS+T G+ G+   S     P +V          +  E+V ++QI  G+ F+
Sbjct: 375 KGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEV-IKQIACGTNFT 431


>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
           johnsoniae UW101]
 gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
           johnsoniae UW101]
          Length = 1679

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 160/361 (44%), Gaps = 30/361 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           ++TWG N   Q+ +      + P      +N +   AG   T  L + G L  +G G LG
Sbjct: 40  LWTWGNNDEGQLGNSTPAAINIPTKMGTANNWKTAAAGWGHTVALKTDGTLWAWGYGRLG 99

Query: 250 -LAN---TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            L N    T   LP+++  E    +++       H + + ++G +++WG    G+LG+G 
Sbjct: 100 QLGNGNYNTNFNLPQQIGTENDWQTIAAG---HGHTVALKNDGTLWAWGNNFSGQLGNGT 156

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           +  +  P  I           +SAG  ++ A+ +DG L+ WG+  +G LG G   +   P
Sbjct: 157 SFDRNTPTKIGSD---SNWLAISAGGLYTIALKKDGTLWAWGKNTYGTLGDGTTTNNRVP 213

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             +   +D   ++ G  HT+ +  DG ++W  G    G LG   T     P  I     +
Sbjct: 214 KQIGTDTDWKTIAAGSDHTIAIKNDG-SLWIWGKNTYGALGDNTTIDKIVPTKIGTDTDW 272

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIG 480
           +  +   G  ++VA+  DG ++ WG          S I+   PV +    + Q+V  S G
Sbjct: 273 KSAE--GGVDYTVAIKTDGTLWAWGYNADGVFGNGSKINSLIPVQIGTEKNWQMV--SGG 328

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP-------SKVVGLEDVCVRQICAG 533
             H +A+     +++WG+N+ GQ G D  S   + P       S +V +    VR  CAG
Sbjct: 329 SVHTVAVKTDESLWSWGNNSYGQLG-DGTSIEKNIPTLLNCAGSLIVTVSQTNVR--CAG 385

Query: 534 S 534
           S
Sbjct: 386 S 386



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 14/291 (4%)

Query: 222 RHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVS-LSVSKCSEA 279
           +   AG   T  + + G L  +G    G L N+T  P    +P +    +    +     
Sbjct: 22  KTAAAGYSHTVAVRNDGTLWTWGNNDEGQLGNST--PAAINIPTKMGTANNWKTAAAGWG 79

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGN-TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           H + + ++G +++WG G  G+LG+GN   +   P+ I  G      T ++AGH H+ A+ 
Sbjct: 80  HTVALKTDGTLWAWGYGRLGQLGNGNYNTNFNLPQQI--GTENDWQT-IAAGHGHTVALK 136

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG L+ WG    G+LG+G    R+TPT +   S+  A+S G  +T+ L +DG T+W+ G
Sbjct: 137 NDGTLWAWGNNFSGQLGNGTSFDRNTPTKIGSDSNWLAISAGGLYTIALKKDG-TLWAWG 195

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRS 455
               G LG   T     PK I     ++   + AG+  ++A+  DG ++ WG    G   
Sbjct: 196 KNTYGTLGDGTTTNNRVPKQIGTDTDWKT--IAAGSDHTIAIKNDGSLWIWGKNTYGALG 253

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
            + +    V     +         G  + +A+     ++AWG N  G  G 
Sbjct: 254 DNTTIDKIVPTKIGTDTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGN 304



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 16/220 (7%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
            +AG+SH+ AV  DG L+TWG  D G+LG+    + + PT +   ++    + G  HT+ 
Sbjct: 24  AAAGYSHTVAVRNDGTLWTWGNNDEGQLGNSTPAAINIPTKMGTANNWKTAAAGWGHTVA 83

Query: 387 LSQDGHTVWSMGSGNLGKLGHED-TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
           L  DG T+W+ G G LG+LG+ +       P+ I     ++   + AG   +VAL  DG 
Sbjct: 84  LKTDG-TLWAWGYGRLGQLGNGNYNTNFNLPQQIGTENDWQT--IAAGHGHTVALKNDGT 140

Query: 446 VFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           ++ WG      LG   +S   +TP  +   S    + +S G  + +AL +   ++AWG N
Sbjct: 141 LWAWGNNFSGQLG-NGTSFDRNTPTKIG--SDSNWLAISAGGLYTIALKKDGTLWAWGKN 197

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           T G  G    +N  ++  K +G  D   + I AGS  +IA
Sbjct: 198 TYGTLGDGTTTN--NRVPKQIG-TDTDWKTIAAGSDHTIA 234



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 23/258 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           ++ WG N   Q+ +      + P      SN   I AG   T  L   G L  +GK   G
Sbjct: 141 LWAWGNNFSGQLGNGTSFDRNTPTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGKNTYG 200

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG   TT   +PK++  +    +++       H + + ++G ++ WG   +G LG   T
Sbjct: 201 TLGDGTTTNNRVPKQIGTDTDWKTIAAG---SDHTIAIKNDGSLWIWGKNTYGALGDNTT 257

Query: 307 LSQRRPKLIMGGLYGKRVTQVSA--GHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
           + +  P  I     G      SA  G  ++ A+  DG L+ WG    G  G+G   +   
Sbjct: 258 IDKIVPTKI-----GTDTDWKSAEGGVDYTVAIKTDGTLWAWGYNADGVFGNGSKINSLI 312

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-------K 417
           P  +    +   VS G  HT+ +  D  ++WS G+ + G+LG   + +   P        
Sbjct: 313 PVQIGTEKNWQMVSGGSVHTVAVKTD-ESLWSWGNNSYGQLGDGTSIEKNIPTLLNCAGS 371

Query: 418 VIEALRKFRVRKVCAGTS 435
           +I  + +  VR  CAG++
Sbjct: 372 LIVTVSQTNVR--CAGSN 387


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 8/210 (3%)

Query: 246 GWLGL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G LGL   A     PLP+ +     ++ + V+ C  +H L +T  G+VYS+G G  G LG
Sbjct: 10  GQLGLKDAAGVFTSPLPRFLRGSRELLFVRVA-CGSSHTLALTGSGDVYSFGQGTFGALG 68

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           HG T S   P +I+  L+G  + Q++ G +HS A+T +G L++WG G +G+LG G +++ 
Sbjct: 69  HGTTESCSSP-VIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENH 127

Query: 363 HTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             P  VT LSD  +  V CG  +T+ +  DG  ++S G G+ G+ GH     +  PK++ 
Sbjct: 128 LQPVPVTALSDRLLTQVVCGADYTMAIDSDGQ-LFSWGHGHWGQTGHGTQDNILVPKLVC 186

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           +L    + +  AG   +VALT  G V+ WG
Sbjct: 187 SLENDNIVQASAGARHAVALTSGGGVYAWG 216



 Score =  101 bits (251), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 112/225 (49%), Gaps = 18/225 (8%)

Query: 292 SWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYT 345
           SWG GE G+LG        +   P+     L G R     +V+ G SH+ A+T  G +Y+
Sbjct: 3   SWGCGEFGQLGLKDAAGVFTSPLPRF----LRGSRELLFVRVACGSSHTLALTGSGDVYS 58

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLG 403
           +G+G  G LGHG  +S  +P +V  L  +G V  +CG++H+  L+ +G  ++S G G  G
Sbjct: 59  FGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQ-LFSWGRGKYG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSI 458
           +LG         P  + AL    + +V  G  +++A+  DG +F WG G        +  
Sbjct: 118 QLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQD 177

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           +   P LV  L +  IV  S G  H +AL+    VYAWG N  GQ
Sbjct: 178 NILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQ 222



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 14/210 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTL------VTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           L +WG G+ G+LG  D     T  L        EL  V  V+CG SHTL L+  G  V+S
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFV-RVACGSSHTLALTGSG-DVYS 58

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---- 452
            G G  G LGH  T   ++P ++++L    + ++  G + S ALT +G +F WG G    
Sbjct: 59  FGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQ 118

Query: 453 LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           L   S+  H  PV VT LS   +  V  G  + +A+    ++++WG    GQ G     N
Sbjct: 119 LGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDN 178

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +  P  V  LE+  + Q  AG+  ++A T
Sbjct: 179 -ILVPKLVCSLENDNIVQASAGARHAVALT 207



 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
             VY++G      +       CS P +  SL    I  I  G   +  L   G L  +G+
Sbjct: 54  GDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGR 113

Query: 246 GWLG-LANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G  G L   +++   + VP+ A +   L+   C   + + + S+G+++SWG G  G+ GH
Sbjct: 114 GKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           G   +   PKL+   L    + Q SAG  H+ A+T  G +Y WG+ + G++
Sbjct: 174 GTQDNILVPKLVCS-LENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 141/294 (47%), Gaps = 16/294 (5%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P+R+    + + L  +   E H L + S   VYS G    G+LG     S  RP+ I   
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ-A 70

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG-- 375
           L    V  VS G  HS AV   G ++ WG G  G+LG G+ K     PT +  L+ +   
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            VSCG  H+L LS+DGH V+S G  + G+LG  +++     P+ +++L    + +V AG 
Sbjct: 131 QVSCGHYHSLALSEDGH-VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           + S AL+  G  F WG      L L  + +    + P  +  L +  ++ +S G  H   
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAV 249

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           L++  +V+ +G N+ GQ  Q +  +    P  + G+    V QI   S  +IAY
Sbjct: 250 LTEEGQVFTFGGNSSGQL-QPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAY 301



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 24/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           +SW  G             R+P+ +  G  G  + Q ++G  HS  +  +  +Y+ G+  
Sbjct: 3   FSWAAG------------SRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNS 50

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +S   P  +  L+D  V  VSCG+ H++ +   G  V++ G+G+ G+LG  
Sbjct: 51  WGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKG-KVFAWGAGSEGQLGIG 109

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++  P  I+AL   ++ +V  G   S+AL+ DG VF WG      LGL  +S S  
Sbjct: 110 EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA 169

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKV 519
            P  V  L    +  V+ G +H  ALS     + WGSN  GQ     +     + +P  +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 230 GALKNLSVIYISCG 243



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 83/173 (47%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V+S G  + G+LG         P+ I+AL    V  V  G   
Sbjct: 27  AASGEHHSLLLFSN-HRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEH 85

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           SVA+   G VF WG G            ISF  P  +  L+  +I+ VS G  H LALS+
Sbjct: 86  SVAVCHKGKVFAWGAGSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALSE 144

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              V++WG N+ GQ G    S     P KV  LE + + Q+ AG   S A ++
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197



 Score = 84.0 bits (206), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 23/315 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
           ++ +VY+ G N   Q+         RP  +Q+L   ++  +  G+  +  +   G +  +
Sbjct: 39  SNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAW 98

Query: 244 G---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LG+     I  +P ++   A I  + VS C   H L ++ +G V+SWG    G
Sbjct: 99  GAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVS-CGHYHSLALSEDGHVFSWGRNSEG 157

Query: 300 KLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +LG G N+ SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    
Sbjct: 158 QLGLGKNSRSQAIPQKVK-SLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSG 216

Query: 359 LKSR---HTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
            K +   + P  +  L ++    +SCG  HT VL+++G  V++ G  + G+L        
Sbjct: 217 NKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ-VFTFGGNSSGQLQPSPRSGQ 275

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPV------LV 466
             P++IE +   RV ++   +  ++A  +  G V   G G   +S   H         + 
Sbjct: 276 RGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDIT 334

Query: 467 TGLSSHQIVDVSIGD 481
             L++  +VD+ + D
Sbjct: 335 CLLAAEDLVDIEVKD 349


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           R +S+     I  I  G + +  L   G L  +G+   G LG+          ++    A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            V L+     EAH   ++  G +YSWG  E G+LG G+T S+  P LI  GL  ++V  V
Sbjct: 190 GVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIE-GLDNQKVEFV 248

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
           + G SHSA +T+DGLL+T+G G HG+LGH   ++   P LV EL    V  ++CG  HTL
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               D   V+S GSG  G+LG+  T     P
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+  P+L+  L +  V  V+CG S
Sbjct: 194 AQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+ +L+QDG  +++ G+G  G+LGH  T     P ++  L  +RV ++  G   ++A   
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 34/301 (11%)

Query: 221 IRHIEAG-QFCTFLLDSTGGLLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSLSV 273
           +R +E   Q C     S G L V  +G  G      LA +     PK + L   +   SV
Sbjct: 47  LRRVEVTRQLCC----SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSV 102

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            + +E H+L ++S+G+ + +       L   + L +            K++ Q++ G  H
Sbjct: 103 DQGAE-HMLILSSDGKPFEYDNYSMKHLRFESILQE------------KKIIQITCGDYH 149

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
           S A+++ G L+ WG+  HG+LG G    S  TP +V  L+ V    +S GE+H+  LS  
Sbjct: 150 SLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMS 209

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G+ ++S G    G+LG   T     P +IE L   +V  V  G S S  LT DGL+F +G
Sbjct: 210 GN-IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFG 268

Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQC 504
            G       +S+ +   P LV  L  +++  ++ G  H LA +S   +V+++GS   GQ 
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQL 328

Query: 505 G 505
           G
Sbjct: 329 G 329



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNI 212

Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 271 KHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329

Query: 356 HGDLKSRHTP 365
           +G  + +  P
Sbjct: 330 NGGTRDQLMP 339



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H  AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSTAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS + GL++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNECGQLGLGH-TESKDDPSLIEGLDNQKVEFVACGGS 253



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
           +G   TPK I+  +  ++  V  G    + L+ DG  F         + S       + L
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF------EYDNYSMKHLRFESIL 135

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
              +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195

Query: 530 ICAGSLFSIAYTV 542
           I AG   S A ++
Sbjct: 196 ISAGEAHSTALSM 208



 Score = 44.7 bits (104), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K     +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           + L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGY 295

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G T  Q  P
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339


>gi|288921247|ref|ZP_06415531.1| regulator of chromosome condensation RCC1 [Frankia sp. EUN1f]
 gi|288347337|gb|EFC81630.1| regulator of chromosome condensation RCC1 [Frankia sp. EUN1f]
          Length = 370

 Score =  117 bits (294), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 97/297 (32%), Positives = 143/297 (48%), Gaps = 22/297 (7%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G+G LG   TT +  P +V     I +++  + S  + +   + G V +WG   H +LG 
Sbjct: 33  GQGQLGDGTTTGRLTPVQVTGIDEITAVAAGE-STGYAM---AWGAVQAWGDNSHNELGD 88

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T  +  P  +   +    V  V AG  +  AV  DG  + WGE   G +G G   +R 
Sbjct: 89  GTTTDRLTPVQVSDLV---DVIAVGAGAHNGYAVRSDGTAWAWGENSDGAVGDGTTVNRS 145

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           TP  V++L+DV +V+ G      +  DG T W+ G  N G+LG   T   +TP  +  L 
Sbjct: 146 TPVQVSDLTDVISVAGGMHTGYAVRSDG-TAWAWGFNNAGQLGDGTTTSRSTPVQVSNLT 204

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
           +  V+ V  G     AL  DG V+ WG      LG  +++ S  TPV V+GL+  QI+ +
Sbjct: 205 Q--VKAVAGGVYRGYALRDDGTVWAWGSNSFGALGNGTTTDSL-TPVPVSGLT--QIIAI 259

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           + G +   AL     V+AWG N +GQ G    +N    P +V GL  V    I AG+
Sbjct: 260 AAGSNSGYALRSDGTVWAWGYNYVGQLGDGTTTNS-PTPVQVSGLTRVAA--IAAGA 313



 Score =  114 bits (286), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 156/351 (44%), Gaps = 35/351 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--KGW 247
           V  WG N   Q+ D        P   +    I  + AG+       STG  + +G  + W
Sbjct: 26  VLAWGANGQGQLGDGTTTGRLTPVQVTGIDEITAVAAGE-------STGYAMAWGAVQAW 78

Query: 248 -------LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
                  LG   TT +  P +V   + +V +        +   V S+G  ++WG    G 
Sbjct: 79  GDNSHNELGDGTTTDRLTPVQV---SDLVDVIAVGAGAHNGYAVRSDGTAWAWGENSDGA 135

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           +G G T+++  P  +        V  V+ G     AV  DG  + WG  + G+LG G   
Sbjct: 136 VGDGTTVNRSTPVQVSDL---TDVISVAGGMHTGYAVRSDGTAWAWGFNNAGQLGDGTTT 192

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           SR TP  V+ L+ V AV+ G      L  DG TVW+ GS + G LG+  T    TP  + 
Sbjct: 193 SRSTPVQVSNLTQVKAVAGGVYRGYALRDDG-TVWAWGSNSFGALGNGTTTDSLTPVPVS 251

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L +  +  + AG++   AL  DG V+ WG      LG  +++ S  TPV V+GL+  ++
Sbjct: 252 GLTQ--IIAIAAGSNSGYALRSDGTVWAWGYNYVGQLGDGTTTNS-PTPVQVSGLT--RV 306

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDV 525
             ++ G     AL +   V AWGSN  G  G    +N    P++V GL  +
Sbjct: 307 AAIAAGAYTGYALRRDGTVRAWGSNAGGALGDGTNTNR-PTPAQVTGLSGI 356



 Score =  101 bits (251), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 91/328 (27%), Positives = 143/328 (43%), Gaps = 21/328 (6%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIG--DTDISVAHSKVYTWGCNLHHQILDEVRGKCSR 211
           LGD  ++   T +  T   ++T       T  ++A   V  WG N H+++ D        
Sbjct: 37  LGDGTTTGRLTPVQVTGIDEITAVAAGESTGYAMAWGAVQAWGDNSHNELGDGTTTDRLT 96

Query: 212 PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLAN--TTIQPLPKRVPLEAAIV 269
           P   S   ++  + AG    + + S G    +G+   G     TT+    +  P++ + +
Sbjct: 97  PVQVSDLVDVIAVGAGAHNGYAVRSDGTAWAWGENSDGAVGDGTTVN---RSTPVQVSDL 153

Query: 270 SLSVSKCSEAHV-LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           +  +S     H    V S+G  ++WG    G+LG G T S+  P  +       +V  V+
Sbjct: 154 TDVISVAGGMHTGYAVRSDGTAWAWGFNNAGQLGDGTTTSRSTPVQVSNL---TQVKAVA 210

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLS 388
            G     A+ +DG ++ WG    G LG+G      TP  V+ L+ + A++ G +    L 
Sbjct: 211 GGVYRGYALRDDGTVWAWGSNSFGALGNGTTTDSLTPVPVSGLTQIIAIAAGSNSGYALR 270

Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
            DG TVW+ G   +G+LG   T    TP  +  L   RV  + AG     AL  DG V  
Sbjct: 271 SDG-TVWAWGYNYVGQLGDGTTTNSPTPVQVSGLT--RVAAIAAGAYTGYALRRDGTVRA 327

Query: 449 WG------LGLRSSSISFHTPVLVTGLS 470
           WG      LG   ++ +  TP  VTGLS
Sbjct: 328 WGSNAGGALG-DGTNTNRPTPAQVTGLS 354



 Score = 70.9 bits (172), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 5/191 (2%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG- 249
           + WG N   Q+ D      S P   S  + ++ +  G +  + L   G +  +G    G 
Sbjct: 176 WAWGFNNAGQLGDGTTTSRSTPVQVSNLTQVKAVAGGVYRGYALRDDGTVWAWGSNSFGA 235

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
           L N T       VP+      ++++  S +    + S+G V++WG    G+LG G T + 
Sbjct: 236 LGNGTTTDSLTPVPVSGLTQIIAIAAGSNSG-YALRSDGTVWAWGYNYVGQLGDGTTTNS 294

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
             P  + G     RV  ++AG     A+  DG +  WG    G LG G   +R TP  VT
Sbjct: 295 PTPVQVSGL---TRVAAIAAGAYTGYALRRDGTVRAWGSNAGGALGDGTNTNRPTPAQVT 351

Query: 370 ELSDVGAVSCG 380
            LS + A++ G
Sbjct: 352 GLSGISAIAGG 362


>gi|383319150|ref|YP_005379991.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
 gi|379320520|gb|AFC99472.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
           [Methanocella conradii HZ254]
          Length = 461

 Score =  117 bits (294), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 90/291 (30%), Positives = 143/291 (49%), Gaps = 34/291 (11%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           +++S+S      +H L +TS+G V +WG  +HG+LG G T+S   P    G  +   V  
Sbjct: 27  SVISISAGA---SHCLALTSDGSVLAWGNNDHGQLGDGTTVSASTPVKAKGLTH---VVA 80

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           ++AG SHS A+ +DG ++ WG+  +G LG G  + R TP  V  L++V A+S G   +  
Sbjct: 81  IAAGASHSLALKDDGTVWAWGDNYNGNLGDGTTEDRLTPVQVVGLTNVKAISAGIMTSFA 140

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L  DG T+W+ G+ + G LG        TP  ++A    +V K+  G   + A+T DG V
Sbjct: 141 LKDDG-TLWAWGANSRGDLGDGTLEDRLTP--VQAKVPAKVVKI--GHKGTFAVTDDGDV 195

Query: 447 FWWG---------------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           + WG               LG     +   TP  V   SS  + +++ G  HV+ +    
Sbjct: 196 WAWGNNVIIVFGNDSICGMLGDNYGQVR-PTPFRVEQPSS--VKEITNGLEHVVFIKDDG 252

Query: 492 EVYAWGSNTMGQCGQD---NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            V+ WG N  GQ G +   +       P K +G+ +  V+ + AG  +S+A
Sbjct: 253 TVWTWGLNDKGQLGNNAKIDDKTVTTTPVKALGINN--VKDVSAGYYYSLA 301



 Score =  111 bits (277), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 44/358 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V  WG N H Q+ D      S P      +++  I AG   +  L   G +  +G  + G
Sbjct: 47  VLAWGNNDHGQLGDGTTVSASTPVKAKGLTHVVAIAAGASHSLALKDDGTVWAWGDNYNG 106

Query: 250 -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT---VTSEGEVYSWGVGEHGKLGHGN 305
            L + T +   +  P++  +V L+  K   A ++T   +  +G +++WG    G LG G 
Sbjct: 107 NLGDGTTE--DRLTPVQ--VVGLTNVKAISAGIMTSFALKDDGTLWAWGANSRGDLGDGT 162

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE------GDH---GRLGH 356
              +  P  +   +  K    V  GH  + AVT+DG ++ WG       G+    G LG 
Sbjct: 163 LEDRLTP--VQAKVPAK---VVKIGHKGTFAVTDDGDVWAWGNNVIIVFGNDSICGMLGD 217

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH----EDTGK 412
              + R TP  V + S V  ++ G  H + +  DG TVW+ G  + G+LG+    +D   
Sbjct: 218 NYGQVRPTPFRVEQPSSVKEITNGLEHVVFIKDDG-TVWTWGLNDKGQLGNNAKIDDKTV 276

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---------LGLRSSSISFHTP 463
            TTP  ++AL    V+ V AG  +S+AL  DG V+ WG         LG+ S  +S   P
Sbjct: 277 TTTP--VKALGINNVKDVSAGYYYSLALKDDGSVWKWGEDYYTIPNMLGVYSKLVS--AP 332

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
             + GLS   I+ +S G+   +AL     V+ WG N  GQ G  + ++ V  P K++G
Sbjct: 333 EQIGGLSG--IIAISSGNYFYIALKNDGSVWGWGYNENGQLG--SHASFVSAPVKIIG 386


>gi|330837025|ref|YP_004411666.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329748928|gb|AEC02284.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 697

 Score =  117 bits (294), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 157/318 (49%), Gaps = 28/318 (8%)

Query: 222 RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           R + AG + T +L + G L   G    G LG   TT +  P +V    + V+ +VS    
Sbjct: 339 RAVSAGAYHTMILKNNGTLWATGYNEYGQLGDDTTTNRTTPVQVSSMGSDVA-AVS-AGN 396

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM----GGLYGKRVTQVSAGHSHS 334
            H + +  +G +++ G   HG+LG G+T  +  P+ +     G +    V  VSAG++H+
Sbjct: 397 YHTMILKKDGTLWATGYNAHGQLGVGDTTDRSTPEQVWDSTDGSIRMTNVAAVSAGNTHT 456

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHT 393
             + +DG L+  G    G+LG GD  +R TP  VT++ SDV AVS   S TL+L ++G T
Sbjct: 457 MILKKDGTLWATGGNGSGQLGVGDNNNRITPVQVTDMGSDVAAVSVRASPTLILKKNG-T 515

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           +W+ G    G+LG        TP  + +     V  V  G S ++ L  DG +  W  G 
Sbjct: 516 LWATGYNGFGQLGDNTIINRETPVQVSS----GVATVFTGDSHTMFLKKDGTL--WATGY 569

Query: 454 RSSS-------ISFHTPVLVTGL----SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
            SS        ++  TPV VT +    SS+ +V VS GD+H + L +   ++A G N +G
Sbjct: 570 NSSGQLGVGDHLNKSTPVQVTSMNTDPSSNPVVGVSGGDAHTMILKKDGTLWATGLNDLG 629

Query: 503 QCGQDNFSNPVDQPSKVV 520
           Q G     +    P +V+
Sbjct: 630 QLGDGTIIDKTTIPVQVM 647



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 11/200 (5%)

Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSL 271
           ++  + S++  +      T +L   G L   G    G L + TI  + +  P++ +   +
Sbjct: 489 QVTDMGSDVAAVSVRASPTLILKKNGTLWATGYNGFGQLGDNTI--INRETPVQVS-SGV 545

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG---GLYGKRVTQVS 328
           +     ++H + +  +G +++ G    G+LG G+ L++  P  +           V  VS
Sbjct: 546 ATVFTGDSHTMFLKKDGTLWATGYNSSGQLGVGDHLNKSTPVQVTSMNTDPSSNPVVGVS 605

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTLVTELSDVGAVSCGESHTLVL 387
            G +H+  + +DG L+  G  D G+LG G +  + T P  V  ++DV AV  G  HT++L
Sbjct: 606 GGDAHTMILKKDGTLWATGLNDLGQLGDGTIIDKTTIPVQV--MTDVAAVFTGYYHTMIL 663

Query: 388 SQDGHTVWSMGSGNLGKLGH 407
            +DG T+W  GS   G+LG+
Sbjct: 664 KKDG-TLWGTGSNVDGQLGN 682


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 18/299 (6%)

Query: 252 NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR 311
           +  +  +    P    +VS   S     H + + +   + +WG GE G+LGHG+   +  
Sbjct: 2   DAALSAVADEAPPAVVLVSAGAS-----HSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV 56

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDG-LLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           P +I  G     +T V  G  H+ A +ED   +Y+WG GD GRLGHG+     TP  V  
Sbjct: 57  PTVIS-GFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA 115

Query: 371 LSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
           L    +  ++CG+SH L ++  G  + S G    G+LG   T     P+ I+A     V+
Sbjct: 116 LQGIKIKQLACGDSHCLAVTMAGEVL-SWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK 174

Query: 429 KVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
            + AG   + A+T DG ++ WG      LGL   +  F  P  V+ +   ++V V+ G  
Sbjct: 175 MIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRF-VPEKVSSVEGDKMVLVACGWR 233

Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           H + +S    +Y +G +  GQ G  +F + +  P KV  L+D    QI  G   ++A T
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHL-VPHKVEALKDSSTSQISGGWRHTMALT 291



 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 19/261 (7%)

Query: 242 VYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           VY  GW     LG  N+T    P P +      I  L+   C ++H L VT  GEV SWG
Sbjct: 88  VYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA---CGDSHCLAVTMAGEVLSWG 144

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
             ++G+LG G T     P+ I     G  V  ++AG  H+AAVTEDG +Y WG G +G L
Sbjct: 145 RNQNGQLGLGTTEDSLLPQTIQA-FEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNL 203

Query: 355 GHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           G GD   R  P  V+  E   +  V+CG  HT+ +S  G ++++ G    G+LGH D   
Sbjct: 204 GLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSG-SLYTYGWSKYGQLGHGDFED 262

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVT 467
              P  +EAL+     ++  G   ++ALT DG ++ WG      + +   + H +P  V 
Sbjct: 263 HLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVN 322

Query: 468 GLSSHQIVDVSIGDSHVLALS 488
                ++  V+ G  H LA +
Sbjct: 323 FPEEQKVAQVACGWRHTLAFT 343


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 104/197 (52%), Gaps = 6/197 (3%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
             I  I  G + +  L   G L  +G+   G LG+          ++    A V L+   
Sbjct: 137 KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQIS 196

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             EAH + ++  G VYSWG  E G+LG G+T S+  P LI   L  ++V  ++ G SHSA
Sbjct: 197 AGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLI-EALDNQKVEFLACGGSHSA 255

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT 393
            +T+DGLL+T+G G HG+LGH   ++   P LV EL  + V  ++CG  HTL    D   
Sbjct: 256 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGK 315

Query: 394 VWSMGSGNLGKLGHEDT 410
           V+S GSG  G+LG+  T
Sbjct: 316 VFSFGSGKDGQLGNGGT 332



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 17/259 (6%)

Query: 199 HQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQ 256
           HQ+L    G    P+   L  N++   ++ G     +L S G    Y      L + +I 
Sbjct: 76  HQVL-AGSGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESIL 134

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
                   E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+
Sbjct: 135 Q-------EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIV 184

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--V 374
             L G  + Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+ +P+L+  L +  V
Sbjct: 185 EHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             ++CG SH+ +L+QDG  +++ G+G  G+LGH  T     P ++  L   RV ++  G 
Sbjct: 245 EFLACGGSHSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGR 303

Query: 435 SFSVALTWD-GLVFWWGLG 452
             ++A   D G VF +G G
Sbjct: 304 WHTLAYVSDLGKVFSFGSG 322



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 21/182 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 157 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNV 211

Query: 241 LVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 212 YSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLA--CGGSHSALLTQDGLLFTFGAG 269

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 270 KHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 328

Query: 356 HG 357
           +G
Sbjct: 329 NG 330



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---LRSSSISFHTPVLV 466
           +G   TPK I+  +  ++  V  G    + L+ DG  F +      LRS SI        
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGADHMLILSSDGKPFEYDYSMKHLRSESI-------- 133

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             L   +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V 
Sbjct: 134 --LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 191

Query: 527 VRQICAGSLFSIAYTV 542
           + QI AG   S+A ++
Sbjct: 192 LAQISAGEAHSMALSM 207



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 21/168 (12%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG               ++ + K    + I  L++ ++ ++  G
Sbjct: 99  IHSVDQGADHMLILSSDGKP-----------FEYDYSMKHLRSESI--LQEKKIIQITCG 145

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H +AL
Sbjct: 146 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 205

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    VY+WG N  GQ G  + +   D PS +  L++  V  + C GS
Sbjct: 206 SMSGNVYSWGKNEFGQLGLGH-TESKDSPSLIEALDNQKVEFLACGGS 252



 Score = 48.1 bits (113), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        VY+WG N   Q+ L     K S   +
Sbjct: 177 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLI 236

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           ++L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGN 294

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G TL Q  P
Sbjct: 295 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIP 338


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 141/294 (47%), Gaps = 16/294 (5%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P+R+    + + L  +   E H L + S   VYS G    G+LG     S  RP+ I   
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ-A 70

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG-- 375
           L    V  VS G  HS AV   G ++ WG G  G+LG G+ K     PT +  L+ +   
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            VSCG  H+L LS+DGH V+S G  + G+LG  +++     P+ +++L    + +V AG 
Sbjct: 131 QVSCGHYHSLALSEDGH-VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           + S AL+  G  F WG      L L  + +    + P  +  L +  ++ +S G  H   
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAV 249

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
           L++  +V+ +G N+ GQ  Q +  +    P  + G+    V QI   S  +IAY
Sbjct: 250 LTEEGQVFTFGGNSSGQL-QPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAY 301



 Score =  100 bits (250), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 24/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           +SW  G             R+P+ +  G  G  + Q ++G  HS  +  +  +Y+ G+  
Sbjct: 3   FSWAAG------------SRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNS 50

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +S   P  +  L+D  V  VSCG+ H++ +   G  V++ G+G+ G+LG  
Sbjct: 51  WGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKG-KVFAWGAGSEGQLGIG 109

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++  P  I+AL   ++ +V  G   S+AL+ DG VF WG      LGL  +S S  
Sbjct: 110 EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA 169

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKV 519
            P  V  L    +  V+ G +H  ALS     + WGSN  GQ     +     + +P  +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 230 GALKNLSVIYISCG 243



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 83/173 (47%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V+S G  + G+LG         P+ I+AL    V  V  G   
Sbjct: 27  AASGEHHSLLLFSN-HRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEH 85

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           SVA+   G VF WG G            ISF  P  +  L+  +I+ VS G  H LALS+
Sbjct: 86  SVAVCHKGKVFAWGAGSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALSE 144

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
              V++WG N+ GQ G    S     P KV  LE + + Q+ AG   S A ++
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197



 Score = 83.6 bits (205), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 23/312 (7%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG-- 244
           +VY+ G N   Q+         RP  +Q+L   ++  +  G+  +  +   G +  +G  
Sbjct: 42  RVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAG 101

Query: 245 -KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            +G LG+     I  +P ++   A I  + VS C   H L ++ +G V+SWG    G+LG
Sbjct: 102 SEGQLGIGEFKEISFMPTKIKALAGIKIIQVS-CGHYHSLALSEDGHVFSWGRNSEGQLG 160

Query: 303 HG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
            G N+ SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L     K 
Sbjct: 161 LGKNSRSQAIPQKVK-SLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKV 219

Query: 362 R---HTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           +   + P  +  L ++    +SCG  HT VL+++G  V++ G  + G+L          P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ-VFTFGGNSSGQLQPSPRSGQRGP 278

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPV------LVTGL 469
           ++IE +   RV ++   +  ++A  +  G V   G G   +S   H         +   L
Sbjct: 279 QLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLL 337

Query: 470 SSHQIVDVSIGD 481
           ++  +VD+ + D
Sbjct: 338 AAEDLVDIEVKD 349


>gi|405354387|ref|ZP_11023754.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397092349|gb|EJJ23118.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 837

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 166/363 (45%), Gaps = 24/363 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
             V+ WG N + Q+ D  R   S P RL  L    + +  G +   LL   G L  +G G
Sbjct: 454 GSVWAWGSNYYGQLGDGSRRSRSTPVRLAGLTEG-KTVSVGSWHAVLLRQDGSLRTWGSG 512

Query: 247 WLGLANTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           +  +            P++A  +S +     +  H + V  +G V+SWG+ +  +LG G 
Sbjct: 513 YSDVLGDGTTYSKDAAPVQAPELSGVKAVAAAYEHSVAVRGDGTVWSWGLNQDDQLGDGT 572

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGH----SHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
                 P  ++G + G   T V+AG     + + A+ EDG +++WG    G LGH    S
Sbjct: 573 FRPSSVPVQVLG-ITG--ATAVAAGGDTLLAFTVALREDGTVWSWGNNYFGMLGHPAWPS 629

Query: 362 RHTPTL-VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
                + V  L DV A++ G  H + L ++G +VWS G  + G+LG     +  +P  + 
Sbjct: 630 TTQGAVQVPGLMDVTAIAAGNLHAVALRKNG-SVWSWGRNSAGQLGDGTNIQRDSPVPLR 688

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS--SSISFHT---PVLVTGLSSHQIV 475
            L    V+ + AG  F+VAL  DG V+ WG          +F T   P  V GL+   +V
Sbjct: 689 ELAN--VKAITAGRDFAVALHDDGTVWAWGANDSGQLGDGTFATRPLPQQVQGLTG--VV 744

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            V  GD H LAL     V+AWG+N +GQ G D        P ++ G   V    + AG +
Sbjct: 745 AVDAGDDHTLALRNDGTVWAWGNNDLGQLG-DGTRTTQPTPVQMQGFRKVSA--VAAGFI 801

Query: 536 FSI 538
            S+
Sbjct: 802 SSV 804



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 29/295 (9%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           +P +VP  A   +LS     + H + + ++G V+ WG  + G+LG+G   S  +P    G
Sbjct: 377 MPVQVPDLADCKALS---AGDEHTVALRADGTVWVWGTDDFGQLGNGGVPSDAKPVQAQG 433

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
            +    V  V+AG+  + A+ EDG ++ WG   +G+LG G  +SR TP  +  L++   V
Sbjct: 434 LMA---VKAVAAGNDWTVAIGEDGSVWAWGSNYYGQLGDGSRRSRSTPVRLAGLTEGKTV 490

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSF 436
           S G  H ++L QDG ++ + GSG    LG   T  K   P  ++A     V+ V A    
Sbjct: 491 SVGSWHAVLLRQDG-SLRTWGSGYSDVLGDGTTYSKDAAP--VQAPELSGVKAVAAAYEH 547

Query: 437 SVALTWDGLVFWWGLG---------LRSSSISFHTPVLVTGLSSHQIVDVSIGD---SHV 484
           SVA+  DG V+ WGL           R SS+    PV V G++    V  + GD   +  
Sbjct: 548 SVAVRGDGTVWSWGLNQDDQLGDGTFRPSSV----PVQVLGITGATAV-AAGGDTLLAFT 602

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +AL +   V++WG+N  G  G   + +      +V GL DV    I AG+L ++A
Sbjct: 603 VALREDGTVWSWGNNYFGMLGHPAWPSTTQGAVQVPGLMDVTA--IAAGNLHAVA 655



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 127/244 (52%), Gaps = 23/244 (9%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L VT + +V +WG  E  +LG G    Q R    + GL G  VT V +  +H AA+ E
Sbjct: 155 HALVVTEQQKVQAWGNNESTQLGRGE--PQYR---TVSGLTG--VTAVKSRLAHVAALKE 207

Query: 340 DGLLYTWGEGDHGRLGHGDLK--SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           DG ++TWG     +LG  D+   SR TP  V  L+   A++ G+SHT+ L +DG +VW+ 
Sbjct: 208 DGSIWTWGSNAASQLGA-DISAGSRVTPMQVPGLTGATAIAVGDSHTVALLKDG-SVWTW 265

Query: 398 G---SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           G   SG LG  G E    +  P  +  L    V  + AG S +VA+  DG V+ WG   +
Sbjct: 266 GDNRSGQLGDAGRESQNHI--PAQVPGLAS--VVAIAAGGSRTVAVRQDGTVWTWGT-KQ 320

Query: 455 SSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG-SNTMGQCGQDNFSNP 512
           S+   F+ TPV V GL+     D S  D+HV+ L     V+ WG +N +G   QD  + P
Sbjct: 321 SNRQDFNPTPVQVPGLTDVIAADAS--DNHVVVLRTDGTVWGWGRANLLGGSTQDWLTMP 378

Query: 513 VDQP 516
           V  P
Sbjct: 379 VQVP 382



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 124/267 (46%), Gaps = 13/267 (4%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFC----TFLLDSTGGLLVYG 244
           V++WG N   Q+ D      S P +Q L  +    + AG       T  L   G +  +G
Sbjct: 557 VWSWGLNQDDQLGDGTFRPSSVP-VQVLGITGATAVAAGGDTLLAFTVALREDGTVWSWG 615

Query: 245 KGWLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
             + G+      P   +  ++   ++ ++       H + +   G V+SWG    G+LG 
Sbjct: 616 NNYFGMLGHPAWPSTTQGAVQVPGLMDVTAIAAGNLHAVALRKNGSVWSWGRNSAGQLGD 675

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G  + QR   + +  L    V  ++AG   + A+ +DG ++ WG  D G+LG G   +R 
Sbjct: 676 GTNI-QRDSPVPLREL--ANVKAITAGRDFAVALHDDGTVWAWGANDSGQLGDGTFATRP 732

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            P  V  L+ V AV  G+ HTL L  DG TVW+ G+ +LG+LG        TP  ++  R
Sbjct: 733 LPQQVQGLTGVVAVDAGDDHTLALRNDG-TVWAWGNNDLGQLGDGTRTTQPTPVQMQGFR 791

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG 450
           K  V  V AG   SV L  +G V+ WG
Sbjct: 792 K--VSAVAAGFISSVVLLENGTVWGWG 816



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 21/279 (7%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           + +  ++  K   AHV  +  +G +++WG     +LG   +   R   + + GL G   T
Sbjct: 187 SGLTGVTAVKSRLAHVAALKEDGSIWTWGSNAASQLGADISAGSRVTPMQVPGLTG--AT 244

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVGAVSCGESHT 384
            ++ G SH+ A+ +DG ++TWG+   G+LG    +S+ H P  V  L+ V A++ G S T
Sbjct: 245 AIAVGDSHTVALLKDGSVWTWGDNRSGQLGDAGRESQNHIPAQVPGLASVVAIAAGGSRT 304

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDG 444
           + + QDG TVW+ G+    +     T  V  P + + +         A  +  V L  DG
Sbjct: 305 VAVRQDG-TVWTWGTKQSNRQDFNPT-PVQVPGLTDVI------AADASDNHVVVLRTDG 356

Query: 445 LVFWWGLG--LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
            V+ WG    L  S+  + T PV V  L+  +   +S GD H +AL     V+ WG++  
Sbjct: 357 TVWGWGRANLLGGSTQDWLTMPVQVPDLADCKA--LSAGDEHTVALRADGTVWVWGTDDF 414

Query: 502 GQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIA 539
           GQ G  N   P D +P +  GL  + V+ + AG+ +++A
Sbjct: 415 GQLG--NGGVPSDAKPVQAQGL--MAVKAVAAGNDWTVA 449


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 26/283 (9%)

Query: 241 LVYGKGWLGLANTTIQPLP----KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           L  G G +G   T  +P+     K +P +     LS +       + +T +G+VY+ G  
Sbjct: 184 LCCGHGEVG--RTIFRPMQVEALKGIPCKQVATGLSFT-------VILTRDGQVYTCGSN 234

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            HG+LGHG+T+ +  PKLI       +V Q++AG S++ AVT+DG ++++G   +  LGH
Sbjct: 235 THGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGH 294

Query: 357 GDLKSRHTPTLVTELS----DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
           GD      P  +         V  VS G+ H + L   GH V++ G G  G LGH D   
Sbjct: 295 GDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGH-VYTWGRGYCGALGHGDEND 353

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL-----RSSSISFHTPV 464
            T+P++I +L+     +VCA    +  LT +G V    W G G      R +S     P 
Sbjct: 354 KTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPR 413

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
           ++  L  H +  +S G  H +A++    V+ +G N   Q GQ+
Sbjct: 414 VLESLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQE 456



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 125/266 (46%), Gaps = 37/266 (13%)

Query: 290 VYSWGVGEHGKLGHGNTLSQ-------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
           VYS G    G LGHG   +Q         P L        RV  +SA H+H+A VTE G 
Sbjct: 122 VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSL-------SRVINISASHNHAAFVTESGE 174

Query: 343 LYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGS 399
           ++T G+      GHG++ ++   P  V  L  +    V+ G S T++L++DG  V++ GS
Sbjct: 175 VFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQ-VYTCGS 233

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRK-FRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
              G+LGH DT    TPK+IE      +V ++ AG S++ A+T DG V  +G     S  
Sbjct: 234 NTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFG-----SCT 288

Query: 459 SF-------HTPVLVTGLSSHQ-----IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           +F       H  +L   + S +     +V VS GD H +AL     VY WG    G  G 
Sbjct: 289 NFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGH 348

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICA 532
            +  N    P  +  L+     Q+CA
Sbjct: 349 GD-ENDKTSPELIGSLKGQVAVQVCA 373



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 16/248 (6%)

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVS 270
           L+ +P   + +  G   T +L   G +   G    G LG  +T  +  PK + L      
Sbjct: 204 LKGIP--CKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQ 261

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQV 327
           +       ++   VT +G V+S+G   +  LGHG+   +  P+ I    + +R   V +V
Sbjct: 262 VVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQS--FKRRNIHVVRV 319

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGESH-TL 385
           SAG  H+ A+   G +YTWG G  G LGHGD   + +P L+  L    AV  C     T 
Sbjct: 320 SAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTF 379

Query: 386 VLSQDGHTV---WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           VL+ +G  V   W MG G+LG L    + KV  P+V+E+L+   V ++  G   +VA+T 
Sbjct: 380 VLTDEGSVVAFGW-MGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAVTN 438

Query: 443 DGLVFWWG 450
            G+VF +G
Sbjct: 439 KGIVFGFG 446



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 118/277 (42%), Gaps = 13/277 (4%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           S  H   VT  GEV++ G       GHG         + +  L G    QV+ G S +  
Sbjct: 162 SHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVI 221

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHT 393
           +T DG +YT G   HG+LGHGD   R TP L+      + V  ++ G S+T  ++ DG T
Sbjct: 222 LTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDG-T 280

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEAL--RKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
           V S GS     LGH D      P+ I++   R   V +V AG   +VAL   G V+ WG 
Sbjct: 281 VHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGR 340

Query: 452 GL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG- 505
           G              +P L+  L     V V         L+    V A+G    G  G 
Sbjct: 341 GYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGF 400

Query: 506 -QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                S+ V +P  +  L+D  V QI  G   ++A T
Sbjct: 401 LDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAVT 437



 Score = 45.8 bits (107), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 8/155 (5%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  + AG      LD+ G +  +G+G+   LG  +   +  P+ +      V++ V   
Sbjct: 315 HVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCA- 373

Query: 277 SEAHVLTVTSEGEV--YSW-GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            +     +T EG V  + W G G  G L  G +    RP+ ++  L    V+Q+S G  H
Sbjct: 374 RKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPR-VLESLQDHYVSQISTGLYH 432

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
           + AVT  G+++ +G+ +  +LG   ++    PT +
Sbjct: 433 TVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEI 467


>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
 gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
           troglodytes]
 gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
 gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Chronic lymphocytic leukemia deletion region gene 7
           protein; Short=CLL deletion region gene 7 protein;
           AltName: Full=Regulator of chromosome condensation and
           BTB domain-containing protein 1
 gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
 gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
 gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [synthetic construct]
 gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 531

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S +  L VT   EV+ +G+     LG G+  S   PK + G L GK++ 
Sbjct: 19  ASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 20/242 (8%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L ++ +G+V+S G   +G+LG G           +       + Q+SAG SHS AV
Sbjct: 56  ERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAV 115

Query: 338 TEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           ++DG L+ WG   HG+L   GD+ +  TP  V  L +   V+CG SHT+ L+        
Sbjct: 116 SDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLN-------- 167

Query: 397 MGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            G G +   G +  G++  +P  +E      + ++ AG  F++ALT  G +F WG     
Sbjct: 168 -GGGRVFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEG 226

Query: 456 SSISFHT-----PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDN 508
               F       P  V  ++S  +V V  GDSH +AL+    V++ GS++ GQ  CGQ N
Sbjct: 227 QLGDFTNKDVVNPCAVPNINS--VVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPN 284

Query: 509 FS 510
            S
Sbjct: 285 RS 286



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 23/267 (8%)

Query: 289 EVYSWGVGEHGKLG------HGNTLSQRRPKLIMGG---LYGKRVTQVSAGHSHSAAVTE 339
           ++Y +G    G+LG        +      P+L+ G      G  V  +++G  H+  +++
Sbjct: 5   QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHT---PTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           DG +++ G   +G LG G ++       P  ++    +  +S G SH++ +S DG  +++
Sbjct: 65  DGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGR-LFA 123

Query: 397 MGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            GS + G+L    D     TPK + +L +    +V  G S +V+L   G VF WG   +S
Sbjct: 124 WGSNSHGQLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWGQ--QS 179

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP-VD 514
                H+P  V    S  IV +S G+   +AL+    ++AWG N  GQ G  +F+N  V 
Sbjct: 180 DGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLG--DFTNKDVV 237

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            P  V  +  V   +   G   SIA T
Sbjct: 238 NPCAVPNINSVVAVE--CGDSHSIALT 262



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 45/368 (12%)

Query: 185 VAHSKVYTWGCNLHHQI---LDEVRGKCSR---PRL-QSLPSN-----IRHIEAGQFCTF 232
           +A  ++Y +GC    Q+    D V         PRL    P+      ++ I +G+  T 
Sbjct: 1   MARRQLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTL 60

Query: 233 LLDSTGGLLVYGK------GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTS 286
            L   G +   G       G  G+   +    P  +    +I+ +S  +   +H + V+ 
Sbjct: 61  FLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGR---SHSMAVSD 117

Query: 287 EGEVYSWGVGEHGKLG-HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           +G +++WG   HG+L   G+ L+   PK +          QV+ G SH+ ++   G ++ 
Sbjct: 118 DGRLFAWGSNSHGQLAMSGDILASDTPKRVPS---LPETVQVACGASHTVSLNGGGRVFI 174

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG+   GR+       RH+P  V     +  V  S G   T+ L+  G T+++ G    G
Sbjct: 175 WGQQSDGRI-------RHSPAEVEIFISIPIVQISAGNLFTMALTASG-TLFAWGKNEEG 226

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           +LG      V  P  +  +    V  V  G S S+ALT +G VF  G      LG    +
Sbjct: 227 QLGDFTNKDVVNPCAVPNINS--VVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPN 284

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            S +    +T +    +  ++ G  H + ++   +++ +G N+ GQ G  N  N +  P 
Sbjct: 285 RSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQI-TPR 342

Query: 518 KVVGLEDV 525
            +  +E+V
Sbjct: 343 VIDSVENV 350



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 18/234 (7%)

Query: 165 DIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR-- 222
           DI ++ TPK   ++ +T + VA    +T   N   ++   + G+ S  R++  P+ +   
Sbjct: 137 DILASDTPKRVPSLPET-VQVACGASHTVSLNGGGRVF--IWGQQSDGRIRHSPAEVEIF 193

Query: 223 ------HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSV 273
                  I AG   T  L ++G L  +GK   G LG         P  VP   ++V++  
Sbjct: 194 ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVAV-- 251

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            +C ++H + +T EG V+S G    G+LG G     +     +  + G  VT+++ G  H
Sbjct: 252 -ECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCH 310

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           +  V  +G ++T+G   +G+LGHG+ +++ TP ++  + +V +V  G   +  L
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASVFAGWDQSFCL 363


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 5/196 (2%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM 316
           PLP+ +     ++ + V+ C  +H L +T  G+VYS+G G  G LGHG T S   P +I+
Sbjct: 24  PLPRFLRGSRELLFVRVA-CGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSP-VIV 81

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--V 374
             L+G  + Q++ G +HS A+T +G L++WG G +G+LG G +++   P  VT LSD  +
Sbjct: 82  DSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLL 141

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             V CG  +T+ +  DG  ++S G G+ G+ GH     +  PK++ +L    + +  AG 
Sbjct: 142 TQVVCGADYTMAIDSDGQ-LFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGA 200

Query: 435 SFSVALTWDGLVFWWG 450
             +VALT  G V+ WG
Sbjct: 201 RHAVALTSGGGVYAWG 216



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 112/225 (49%), Gaps = 18/225 (8%)

Query: 292 SWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYT 345
           SWG GE G+LG        +   P+     L G R     +V+ G SH+ A+T  G +Y+
Sbjct: 3   SWGCGEFGQLGLKDAAGVFNSPLPRF----LRGSRELLFVRVACGSSHTLALTGSGDVYS 58

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLG 403
           +G+G  G LGHG  +S  +P +V  L  +G V  +CG++H+  L+ +G  ++S G G  G
Sbjct: 59  FGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQ-LFSWGRGKYG 117

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSI 458
           +LG         P  + AL    + +V  G  +++A+  DG +F WG G        +  
Sbjct: 118 QLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQD 177

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           +   P LV  L +  IV  S G  H +AL+    VYAWG N  GQ
Sbjct: 178 NILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQ 222



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 14/210 (6%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTL------VTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           L +WG G+ G+LG  D        L        EL  V  V+CG SHTL L+  G  V+S
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFV-RVACGSSHTLALTGSG-DVYS 58

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---- 452
            G G  G LGH  T   ++P ++++L    + ++  G + S ALT +G +F WG G    
Sbjct: 59  FGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQ 118

Query: 453 LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           L   S+  H  PV VT LS   +  V  G  + +A+    ++++WG    GQ G     N
Sbjct: 119 LGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDN 178

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +  P  V  LE+  + Q  AG+  ++A T
Sbjct: 179 -ILVPKLVCSLENDNIVQASAGARHAVALT 207



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
             VY++G      +       CS P +  SL    I  I  G   +  L   G L  +G+
Sbjct: 54  GDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGR 113

Query: 246 GWLG-LANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G  G L   +++   + VP+ A +   L+   C   + + + S+G+++SWG G  G+ GH
Sbjct: 114 GKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
           G   +   PKL+   L    + Q SAG  H+ A+T  G +Y WG+ + G++
Sbjct: 174 GTQDNILVPKLVCS-LENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223


>gi|357486571|ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355514908|gb|AES96531.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 615

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 116/222 (52%), Gaps = 11/222 (4%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQR-RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           G+V SWG G  G+LGHG  ++    PK I   L    +T VSAG  HS  V++ G L+T 
Sbjct: 294 GKVLSWGRGNSGQLGHGEVVNNLLYPKAITS-LDNYFITHVSAGWGHSGFVSDSGCLFTC 352

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQD--GHTVWSMGSGNL 402
           G+G  G+LGHGD  S  +P  V+   D  V  V+CG  H+LVL +    + V+  GSG  
Sbjct: 353 GDGSFGQLGHGDYASHSSPIKVSSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKR 412

Query: 403 GKLG--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISF 460
           G+LG   +    +  PKVI       +  + A    S AL+ DG ++ WG G +    S 
Sbjct: 413 GQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDS- 471

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           H P  +   S+ +   V++G +H LA++   +VY  G N +G
Sbjct: 472 HLPQCLN--STSKFTKVTLGWNHALAMTGEGKVYMLGGNHLG 511



 Score = 73.9 bits (180), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 37/290 (12%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H   V+  G +++ G G  G+LGHG+  S   P + +     + V QV+ G  HS  + 
Sbjct: 338 GHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSP-IKVSSFVDQNVAQVACGMRHSLVLL 396

Query: 339 EDGL---LYTWGEGDHGRLG--HGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDG 391
           +  L   +Y +G G  G+LG     +KS + P +++   D  +  +S    H+  LS DG
Sbjct: 397 KGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDHSAALSVDG 456

Query: 392 H-TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           H   W  G       G+ED+     P+ + +  KF   KV  G + ++A+T +G V+  G
Sbjct: 457 HLYTWGRGF-----KGYEDS---HLPQCLNSTSKF--TKVTLGWNHALAMTGEGKVYMLG 506

Query: 451 ---LGL-------RSSSISFHTPVL----VTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
              LG+       R +   F +         GL   +I D++ G  H + +++  E+  W
Sbjct: 507 GNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLVTENGEIKTW 566

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGL---EDVCVRQICAGSLFSIAYTVP 543
           G    GQ G  +  + +   +  +G    E   +R  C GS F+ A T P
Sbjct: 567 GWGEHGQLGLGDDGDRISPVTVNLGYDLNEAASIRVYC-GSGFTFALTKP 615



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 43/278 (15%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQIL 202
           L T  D +   LG    ++ ++ I  +S   +  N+      + HS V   GC L +Q+ 
Sbjct: 349 LFTCGDGSFGQLGHGDYASHSSPIKVSSF--VDQNVAQVACGMRHSLVLLKGC-LSNQVY 405

Query: 203 DEVRGK-----CSRPRLQS--LPSNIRHIEAGQFC--------TFLLDSTGGLLVYGKGW 247
               GK      S+ +++S  LP  I   E  +          +  L   G L  +G+G+
Sbjct: 406 GFGSGKRGQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDHSAALSVDGHLYTWGRGF 465

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
            G  ++    LP+ +   +    +++      H L +T EG+VY  G G H  LG  + L
Sbjct: 466 KGYEDSH---LPQCLNSTSKFTKVTLG---WNHALAMTGEGKVYMLG-GNH--LGVLSDL 516

Query: 308 SQRRPKLIM-----------GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
              RP   +            GL G ++T ++ G  HS  VTE+G + TWG G+HG+LG 
Sbjct: 517 HNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLVTENGEIKTWGWGEHGQLGL 576

Query: 357 GDLKSRHTPTLVT---ELSDVGAVS--CGESHTLVLSQ 389
           GD   R +P  V    +L++  ++   CG   T  L++
Sbjct: 577 GDDGDRISPVTVNLGYDLNEAASIRVYCGSGFTFALTK 614



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT----------- 338
           ++SWG G  G+LG G    ++ P+ +   L    V+ ++ G +H  A+T           
Sbjct: 213 LWSWGAGTDGQLGTGRLQDEQIPQQLS--LSLPSVSSLACGGAHVIALTSAQMEKVVRDI 270

Query: 339 ---------------------EDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSD--V 374
                                  G + +WG G+ G+LGHG+ + +   P  +T L +  +
Sbjct: 271 DLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNLLYPKAITSLDNYFI 330

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
             VS G  H+  +S  G  +++ G G+ G+LGH D    ++P  + +     V +V  G 
Sbjct: 331 THVSAGWGHSGFVSDSG-CLFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQNVAQVACGM 389

Query: 435 SFSVALTWDGL---VFWWG------LGLRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHV 484
             S+ L    L   V+ +G      LG+    I S + P +++G    +IV +S    H 
Sbjct: 390 RHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISGFEDEEIVGISANGDHS 449

Query: 485 LALSQYNEVYAWGSNTMG 502
            ALS    +Y WG    G
Sbjct: 450 AALSVDGHLYTWGRGFKG 467


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 21/323 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW-- 247
           V++WG N +  + D      + P      + I  I AG      L S G +  +G G+  
Sbjct: 56  VWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHFVALKSDGTVWTWGVGYSG 115

Query: 248 -LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG    +++  P  +     I ++S       H L + ++G ++SWG  ++G+LG GNT
Sbjct: 116 ELGDGTNSLRTTPAPINGLTGITAIS---AGWNHTLALKADGTLWSWGQNQYGQLGTGNT 172

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
            +   P  + G +    +T +S+G  HS  +  DG +++WG  + G+LG+G   +  TP 
Sbjct: 173 TNSNIPLQVPGQI---GITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPH 229

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            ++ L+ +  VS G  H+  L  DG TVW+ G    G+L + +  K+ +   ++A     
Sbjct: 230 QISGLNGIINVSAGVIHSTALKSDG-TVWNWGCNFRGELANGN--KIDSYIPVQANGLNG 286

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           +  + AG  FS A+  DG  + WG      LG  S S    +P+ V+ LS    +D   G
Sbjct: 287 IIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKS-DVTSPMQVSSLSGITAIDT--G 343

Query: 481 DSHVLALSQYNEVYAWGSNTMGQ 503
            ++ +AL     ++A+G NT GQ
Sbjct: 344 ATYTVALKTDGNIFAFGENTYGQ 366



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 22/262 (8%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           ++G V+SWG  ++G LG G T +   P  + G L G  +T +SAG +H  A+  DG ++T
Sbjct: 52  NDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKG-LNG--ITAISAGWAHFVALKSDGTVWT 108

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG G  G LG G    R TP  +  L+ + A+S G +HTL L  DG T+WS G    G+L
Sbjct: 109 WGVGYSGELGDGTNSLRTTPAPINGLTGITAISAGWNHTLALKADG-TLWSWGQNQYGQL 167

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           G  +T     P  ++   +  +  + +G   S+ +  DG V+ WG      LG  ++S +
Sbjct: 168 GTGNTTNSNIP--LQVPGQIGITSISSGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNS-N 224

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ--PS 517
             TP  ++GL  + I++VS G  H  AL     V+ WG N  G+       N +D   P 
Sbjct: 225 NPTPHQISGL--NGIINVSAGVIHSTALKSDGTVWNWGCNFRGELAN---GNKIDSYIPV 279

Query: 518 KVVGLEDVCVRQICAGSLFSIA 539
           +  GL  +    I AG  FS A
Sbjct: 280 QANGLNGIIA--ITAGWEFSSA 299



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 112/220 (50%), Gaps = 17/220 (7%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           VSAG++ + A+  DG +++WG   +G LG G   + ++P  V  L+ + A+S G +H + 
Sbjct: 40  VSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLNGITAISAGWAHFVA 99

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L  DG TVW+ G G  G+LG       TTP  I  L    +  + AG + ++AL  DG +
Sbjct: 100 LKSDG-TVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLALKADGTL 156

Query: 447 FWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
           + WG      LG  +++ S + P+ V G     I  +S G  H L +     V++WG N 
Sbjct: 157 WSWGQNQYGQLGTGNTTNS-NIPLQVPG--QIGITSISSGGGHSLVIKNDGTVWSWGCNN 213

Query: 501 MGQCGQD-NFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            GQ G   N +NP   P ++ GL  +    + AG + S A
Sbjct: 214 FGQLGNGTNSNNPT--PHQISGLNGII--NVSAGVIHSTA 249



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 125/311 (40%), Gaps = 69/311 (22%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAH-------SKVYTWGCNLHHQILDEVR 206
           LGD  +SNSN+ +       +T          AH         V+TWG     ++ D   
Sbjct: 67  LGDGTTSNSNSPVQVKGLNGITA----ISAGWAHFVALKSDGTVWTWGVGYSGELGDGTN 122

Query: 207 GKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP 263
              + P   +  + I  I AG   T  L + G L  +G+   G LG  NTT   +P +VP
Sbjct: 123 SLRTTPAPINGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP 182

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG------ 317
            +  I S+S       H L + ++G V+SWG    G+LG+G   +   P  I G      
Sbjct: 183 GQIGITSIS---SGGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLNGIIN 239

Query: 318 -------------------------------------------GLYGKRVTQVSAGHSHS 334
                                                      GL G  +  ++AG   S
Sbjct: 240 VSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNG--IIAITAGWEFS 297

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
           +A+  DG  + WG  D+G+LG+G      +P  V+ LS + A+  G ++T+ L  DG+ +
Sbjct: 298 SAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSGITAIDTGATYTVALKTDGN-I 356

Query: 395 WSMGSGNLGKL 405
           ++ G    G+L
Sbjct: 357 FAFGENTYGQL 367



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 13/167 (7%)

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           + H+  +V   S   AVS G + T+ L  DG TVWS G    G LG   T    +P  ++
Sbjct: 24  TTHSQKVVAGTSGYIAVSAGNTTTIALKNDG-TVWSWGFNQNGHLGDGTTSNSNSPVQVK 82

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIV 475
            L    +  + AG +  VAL  DG V+ WG+G    L   + S   TP  + GL+   I 
Sbjct: 83  GLNG--ITAISAGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--IT 138

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQPSKV 519
            +S G +H LAL     +++WG N  GQ G  N +N   P+  P ++
Sbjct: 139 AISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI 185



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 15/186 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V++WGCN   Q+ +        P   S  + I ++ AG   +  L S G +  +G  + G
Sbjct: 206 VWSWGCNNFGQLGNGTNSNNPTPHQISGLNGIINVSAGVIHSTALKSDGTVWNWGCNFRG 265

Query: 250 -LANTTIQPLPKRVPLEA----AIVSLSVS-KCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            LAN     +   +P++A     I++++   + S A    + S+G  + WGV ++G+LG+
Sbjct: 266 ELANG--NKIDSYIPVQANGLNGIIAITAGWEFSSA----IKSDGTFWVWGVNDYGQLGN 319

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+      P + +  L G  +T +  G +++ A+  DG ++ +GE  +G+LG+G      
Sbjct: 320 GSKSDVTSP-MQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTYGQLGNGTTTGST 376

Query: 364 TPTLVT 369
           TP LV+
Sbjct: 377 TPELVS 382


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 19/347 (5%)

Query: 190 VYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           ++ WG  +H ++    +++      R       + I+ I  G+  T ++   G +   G 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87

Query: 246 GWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-H 303
              G L +   +   + +P   A V    + C   H L +   G+++SWG    G+LG +
Sbjct: 88  NDYGQLGHEKGRKRLQLIPGLDAFV-FKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLN 146

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSR 362
                +  P+++   L    V Q++ G  H+ A+T +G LY+WG    G+LG G D+K  
Sbjct: 147 SKNFMESSPRMVKT-LGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYE 205

Query: 363 HTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             P  ++    +    ++CG  H++ +S+ G  V+  G    G+LG  DT     P  ++
Sbjct: 206 IKPKFISAFIGIPIAFIACGGYHSIAISKSG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQ 264

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIV 475
            L+  ++     G  FSV LT DG VF  G G+       S+ +   P  V  L    + 
Sbjct: 265 TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVT 324

Query: 476 DVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            +S G  H LAL      VYAWG    GQ G  + +  V  P  V G
Sbjct: 325 QISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHS-TRSVTTPQVVHG 370



 Score =  110 bits (276), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 142/298 (47%), Gaps = 24/298 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVY 243
            ++Y+ G N + Q+  E      R RLQ +P       +    G + T  ++  G L  +
Sbjct: 80  GEIYSCGNNDYGQLGHEK----GRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 244 G---KGWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LGL +   ++  P+ V      V + ++ C   H   +T+ GE+YSWG    G
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIA-CGMKHAFALTNNGELYSWGSNSEG 194

Query: 300 KLGHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +LG G  +  + +PK I     G  +  ++ G  HS A+++ G ++ WG+   G+LG  D
Sbjct: 195 QLGLGTDIKYEIKPKFI-SAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLND 253

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            + R+ P  +  L +  +   +CGE  ++ L+ DG  V++ G+G  G+LGH        P
Sbjct: 254 TQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDG-GVFTCGAGMYGQLGHGSNSNEILP 312

Query: 417 KVIEALRKFRVRKVCAGTSFSVALT-WDGLVFWWGLGLRS-----SSISFHTPVLVTG 468
           + +  L    V ++  G   ++AL    G V+ WGLG        S+ S  TP +V G
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHG 370



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 22/268 (8%)

Query: 289 EVYSWGVGEHGKLGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +++ WG   HG+LG G     N L  R             + Q++ G +++  +T+ G +
Sbjct: 27  DMFCWGSTIHGELGLGGIEDENILIPRELDFKKAA----EIQQIACGENYTVVITQIGEI 82

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           Y+ G  D+G+LGH   K R    L+  L        +CG  HTL +++ G  ++S GS  
Sbjct: 83  YSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQ-LFSWGSNT 139

Query: 402 LGKLGHEDTGKV-TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
            G+LG      + ++P++++ L    V ++  G   + ALT +G ++ WG      LGL 
Sbjct: 140 EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           +       P  ++      I  ++ G  H +A+S+   V+ WG NT GQ G ++ +   +
Sbjct: 200 TDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLND-TQDRN 258

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P ++  L++  +     G  FS+  TV
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTV 286


>gi|428186664|gb|EKX55514.1| hypothetical protein GUITHDRAFT_99290 [Guillardia theta CCMP2712]
          Length = 1033

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 125/259 (48%), Gaps = 32/259 (12%)

Query: 258  LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
            LPK +P   A++ +  +   E H L ++S G V+S+G G  G+LG G+ ++   PK +  
Sbjct: 782  LPKEIP---AMIEIVQAAAGERHSLLLSSSGIVFSFGDGLQGQLGQGDIVNLVEPKAVEE 838

Query: 318  GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA- 376
             L    V  V+AG  HS A+  +G   +WG G  G+LG G   S   P+ +   ++ GA 
Sbjct: 839  DLVD--VVFVAAGGYHSLAIERNGHATSWGRGGEGQLGSGTRYSTSRPSPMFASNEGGAR 896

Query: 377  ------------------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
                               + G  H+L+L   G  VW  GS   G+LG    G  + P +
Sbjct: 897  QGLYGCKLKMIAAGDWHTAAAGREHSLLLDDKGK-VWVCGSNERGQLGTGLDGGSSIPCI 955

Query: 419  IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
            +E LR   +  + AG + S A+   G VF WG      LGL  S     TP  +T L   
Sbjct: 956  LEPLRSSNIASIFAGPATSAAVDEQGAVFAWGSNSSGMLGLGDSE-DRRTPCAITSLGGL 1014

Query: 473  QIVDVSIGDSHVLALSQYN 491
            Q+VD+++G  H+LAL+++ 
Sbjct: 1015 QVVDLAVGAQHMLALTRWK 1033



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 31/244 (12%)

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE-LSDVGAVSCGES 382
            + Q +AG  HS  ++  G+++++G+G  G+LG GD+ +   P  V E L DV  V+ G  
Sbjct: 792  IVQAAAGERHSLLLSSSGIVFSFGDGLQGQLGQGDIVNLVEPKAVEEDLVDVVFVAAGGY 851

Query: 383  HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK------------- 429
            H+L + ++GH   S G G  G+LG       + P  + A  +   R+             
Sbjct: 852  HSLAIERNGHAT-SWGRGGEGQLGSGTRYSTSRPSPMFASNEGGARQGLYGCKLKMIAAG 910

Query: 430  ----VCAGTSFSVALTWDGLVF--------WWGLGLRSSSISFHTPVLVTGLSSHQIVDV 477
                  AG   S+ L   G V+          G GL   S     P ++  L S  I  +
Sbjct: 911  DWHTAAAGREHSLLLDDKGKVWVCGSNERGQLGTGLDGGS---SIPCILEPLRSSNIASI 967

Query: 478  SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
              G +   A+ +   V+AWGSN+ G  G  + S     P  +  L  + V  +  G+   
Sbjct: 968  FAGPATSAAVDEQGAVFAWGSNSSGMLGLGD-SEDRRTPCAITSLGGLQVVDLAVGAQHM 1026

Query: 538  IAYT 541
            +A T
Sbjct: 1027 LALT 1030


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S +  L VT   EV+ +G+     LG G+  S   PK + G L GK++ 
Sbjct: 19  ASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 173/378 (45%), Gaps = 26/378 (6%)

Query: 182 DISVAHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGG 239
           ++  A S +YTWG +   Q         + P  +Q+L   ++ H   G + +  +   G 
Sbjct: 31  ELPPAVSSLYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGE 90

Query: 240 LLVYGKG---WLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           L   G      LG+    +   P RV  LE  + ++    C + H+L V   G + +WG 
Sbjct: 91  LYTTGSNDARQLGVKGREVALEPIRVSALE--MNNVHGVACGQGHMLAVVDNGHLAAWGS 148

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            E+G+LG G   +      ++  + G    +V+AG +HS A+T  G +Y++GEG  G LG
Sbjct: 149 NEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALG 208

Query: 356 HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           HGD+ +R  PTLV  L    + +++ GE  +  +S  G  V++ G    G+LG+ + G  
Sbjct: 209 HGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGR-VFTWGRNKYGQLGNGEFGNA 267

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------------LGLRSSSISFH 461
             P+ +  + +    +V  G    +ALT  G V+ WG            LG  + +    
Sbjct: 268 FLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLC 325

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           +P  V  L+   I  VS G  H   +S   +++  G+N  GQ    +  + V  P++V G
Sbjct: 326 SPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPS-VALPTRVPG 384

Query: 522 LEDVCVRQICAGSLFSIA 539
           L  + +R   A    SIA
Sbjct: 385 LPGLPMRFAVAAGDHSIA 402



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 24/273 (8%)

Query: 185 VAHSKVYTWGCNLHHQI-LDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGLL 241
           V +  +  WG N + Q+   EV    ++PR+  +   ++   + AG   +  L S+G + 
Sbjct: 138 VDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVY 197

Query: 242 VYGKGWLGL-----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
            +G+G  G       N   +P   +     AIVS++  +   A    V+  G V++WG  
Sbjct: 198 SFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSA---AVSLSGRVFTWGRN 254

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           ++G+LG+G   +   P+ + G    ++  QV+ G  H  A+T  G +YTWG    G+LG 
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGI---EQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQ 311

Query: 357 G-DLKSRH------TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           G +L S        +P+ V  L+D  +  VS G  H+  +S  G  +W  G+ + G+L  
Sbjct: 312 GSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVS-PGEQLWGAGANDEGQLAL 370

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           +    V  P  +  L    +R   A    S+A+
Sbjct: 371 QSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAV 403



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 7/155 (4%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           ++++ G  +LG+ G       T P+ ++AL+   V     G+  S  +T DG ++  G  
Sbjct: 38  SLYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSN 97

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG++   ++   P+ V+ L  + +  V+ G  H+LA+     + AWGSN  GQ G 
Sbjct: 98  DARQLGVKGREVALE-PIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGT 156

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
                   QP  +  +      ++ AG+  S+A T
Sbjct: 157 GEVGASAAQPRVLKRIRGAHFARVAAGATHSLALT 191


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 153/336 (45%), Gaps = 18/336 (5%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG-- 244
            V  WG N   Q+ D      S P    LP+   I  + AG   +  L  TG +L +G  
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSN 117

Query: 245 -KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            +G LG   TT +  P  V L A   +++       H L +T  G V +WG   +G+LG 
Sbjct: 118 SRGQLGDGTTTDRSTPVTVGLPAG-TTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGD 176

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T ++  P + +G   G  +T ++A  ++S A+T+ G    WG    G+LG G    R 
Sbjct: 177 GTTTARSTP-VTVGLPAGTTITALAA-STYSLALTDTGAALAWGSNSRGQLGDGTTTDRS 234

Query: 364 TPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V+    + + A++    H+L L+  G  V + GS + G+LG   T   +TP  +  
Sbjct: 235 TPVTVSLPAGTTITALAASYDHSLALTDTGA-VLAWGSNSNGQLGDGTTTNRSTPVTVGL 293

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIV 475
                +  + AG S ++ LT  G V  WG      LG   ++    TPV V   +   I 
Sbjct: 294 PAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLG-DGTTTDRSTPVTVGLPAGTTIT 352

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
            ++ G  H LAL+    V AWG N+ GQ G    ++
Sbjct: 353 ALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTD 388



 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 149/318 (46%), Gaps = 27/318 (8%)

Query: 240 LLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           +L +G    G LG   TT +  P  V L A   +++      +H L +T  G V +WG  
Sbjct: 59  VLAWGDNFSGQLGDGTTTARSTPVTVGLPAG-TTITALAAGGSHSLALTDTGVVLAWGSN 117

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
             G+LG G T  +  P + +G   G  +T ++AG  HS A+T+ G +  WG   +G+LG 
Sbjct: 118 SRGQLGDGTTTDRSTP-VTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGD 176

Query: 357 GDLKSRHTPTLV-----TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           G   +R TP  V     T ++ + A     +++L L+  G  + + GS + G+LG   T 
Sbjct: 177 GTTTARSTPVTVGLPAGTTITALAA----STYSLALTDTGAAL-AWGSNSRGQLGDGTTT 231

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVL 465
             +TP  +       +  + A    S+ALT  G V  WG      LG   ++ +  TPV 
Sbjct: 232 DRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLG-DGTTTNRSTPVT 290

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV-VGL-E 523
           V   +   I  ++ G SH L L+    V AWGSN+ GQ G    +   D+ + V VGL  
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTT---DRSTPVTVGLPA 347

Query: 524 DVCVRQICAGSLFSIAYT 541
              +  + AG   S+A T
Sbjct: 348 GTTITALAAGYYHSLALT 365



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 18/223 (8%)

Query: 175 TYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTF 232
           TY++  TD   A      WG N   Q+ D      S P   SLP+   I  + A    + 
Sbjct: 203 TYSLALTDTGAA----LAWGSNSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSL 258

Query: 233 LLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGE 289
            L  TG +L +G    G LG   TT +  P  V L A   +++      +H L +TS G 
Sbjct: 259 ALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAG-TTITALAAGRSHTLVLTSAGA 317

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V +WG   +G+LG G T  +  P + +G   G  +T ++AG+ HS A+T+ G +  WG  
Sbjct: 318 VLAWGSNSNGQLGDGTTTDRSTP-VTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGN 376

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
            +G+LG G    R TP  V        +  G + T+++S D H
Sbjct: 377 SYGQLGDGTTTDRSTPVTV-------GLPAGTTITVLVSMDNH 412


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  117 bits (292), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 124/250 (49%), Gaps = 10/250 (4%)

Query: 211 RPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           RP+L ++L     + + AG   T  L   G     G    G LG  +T  +P+PK V   
Sbjct: 206 RPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRV 324
             I  +       ++VL VT +G VYS+G G +  LGHG    + +P++I      G  +
Sbjct: 266 KTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHI 325

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGESH 383
            +VSAG  H+ A+  +G +YTWG+G  G LGHGD   + TP ++  L++  AV  C    
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKR 385

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              +  +G  ++  G    G LG  D G   KV  P+V+E L+  RV +V  G   ++ +
Sbjct: 386 KTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445

Query: 441 TWDGLVFWWG 450
           T  G +F +G
Sbjct: 446 TQRGRIFGFG 455



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 14/248 (5%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           ++ EG  Y+ G   HG+LGHG+TL +  PK++        V Q++AG S+  AVT+DG +
Sbjct: 231 LSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSV 290

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGS 399
           Y++G G +  LGHG+ +    P ++      G     VS G+ H + L  +G  V++ G 
Sbjct: 291 YSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGR-VYTWGK 349

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL--- 453
           G  G LGH D     TP+V+  L      +VCA    +  L   GL++   W G G    
Sbjct: 350 GYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGF 409

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             R  S     P ++  L  H++  VS G  H + ++Q   ++ +G N   Q G D+   
Sbjct: 410 PDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRG 469

Query: 512 PVDQPSKV 519
            ++ P+++
Sbjct: 470 CLE-PTEI 476



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 18/296 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMG 317
           P   P  A +  +S ++   A VL     G+V + G       GH +T     RPKL+  
Sbjct: 156 PIEFPFPAQVAQVSATQNHSAFVL---QSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEA 212

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
            L G    QV+AG   +  ++ +G  YT G   HG+LGHGD   R  P +V  L  +G V
Sbjct: 213 -LKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPV 271

Query: 378 ---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK--FRVRKVCA 432
              + G S+ L ++QDG +V+S GSG+   LGH +      P+VI+A ++    + +V A
Sbjct: 272 VQIAAGPSYVLAVTQDG-SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSA 330

Query: 433 GTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G   +VAL  +G V+ WG G              TP ++  L++   V V         L
Sbjct: 331 GDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVL 390

Query: 488 SQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +   +Y +G    G  G      S+ V +P  +  L+   V Q+  G   +I  T
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVT 446



 Score = 49.7 bits (117), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 190 VYTWG-----CNLHHQILDEVRGKCSRPR-LQSLPSNIRHI---EAGQFCTFLLDSTGGL 240
           VY++G     C  H +  DE++     PR +Q+      HI    AG      LDS G +
Sbjct: 290 VYSFGSGSNFCLGHGEQQDELQ-----PRVIQAFKRKGIHILRVSAGDEHAVALDSNGRV 344

Query: 241 LVYGKGWLGL-----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV-YSWG 294
             +GKG+ G       N  I P    V L      L+V  C+      V  EG + Y +G
Sbjct: 345 YTWGKGYCGALGHGDENDKITP-QVLVNLNNC---LAVQVCARKRKTFVLVEGGLLYGFG 400

Query: 295 VGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
               G LG    G +    RP+ ++  L   RV+QVS G  H+  VT+ G ++ +G+ + 
Sbjct: 401 WMGFGSLGFPDRGVSDKVLRPR-VLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNER 459

Query: 352 GRLGHGDLKSRHTPT 366
            +LGH  L+    PT
Sbjct: 460 AQLGHDSLRGCLEPT 474


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  117 bits (292), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 28/263 (10%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C  ++ + V + G+V S G   HG+LGHG    +  P+++ G L G RV  V+A  +H+ 
Sbjct: 74  CGSSYSVVVVA-GQVASCGKNVHGQLGHGGRDEETAPRVVEG-LRGVRVVAVAARGAHTL 131

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTV 394
           A+ + G +Y+WG GD G+LGHG  ++   P  +  L + V AV  G +H+L L  DG  V
Sbjct: 132 ALDDRGRVYSWGRGDEGQLGHGAFEAVPHPRRIARLPTSVVAVGAGRTHSLALDADG-AV 190

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL--- 451
           +S G G+ G LGH D  +   P+ +E  +      V  G+  +  +T DG +  WG    
Sbjct: 191 YSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAY 250

Query: 452 ----------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY---NEVYAWGS 498
                     GLR + +       + G    + V  + G  H L  +++   + ++A+G 
Sbjct: 251 GQCGASAGGDGLRPAEVP------LPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGW 304

Query: 499 NTMGQCGQDNFSNPVDQPSKVVG 521
           N  GQCG    S     P +V G
Sbjct: 305 NAYGQCGGSTCS--AAAPRRVGG 325



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 109/255 (42%), Gaps = 19/255 (7%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK-RVTQVSAGHSHSAAVTEDGLLYTWGE 348
           VY+ G    G+LG G+  S+  P  +     GK RV  V+ G S+S  V   G + + G+
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGK 92

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             HG+LGHG       P +V  L  V   AV+   +HTL L   G  V+S G G+ G+LG
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGR-VYSWGRGDEGQLG 151

Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH----- 461
           H     V  P+ I  L    V  V AG + S+AL  DG V+ WG G        H     
Sbjct: 152 HGAFEAVPHPRRIARL-PTSVVAVGAGRTHSLALDADGAVYSWGCG--DDGALGHGDRRR 208

Query: 462 --TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN---PVDQP 516
              P  V    +     VS G  H   ++    +  WG    GQCG     +   P + P
Sbjct: 209 QLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVP 268

Query: 517 SKVVGLEDVCVRQIC 531
               G  + CV   C
Sbjct: 269 LPGDGGAE-CVLAAC 282



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTE----LSDVGAVSCGESHTLVLSQDGHTVWSM 397
           L+Y  G    G+LG GD +SR  P  V         V  V+CG S+++V+      V S 
Sbjct: 33  LVYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVAG--QVASC 90

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-- 455
           G    G+LGH    + T P+V+E LR  RV  V A  + ++AL   G V+ WG G     
Sbjct: 91  GKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 456 SSISFHT---PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
              +F     P  +  L +  +V V  G +H LAL     VY+WG    G  G  +
Sbjct: 151 GHGAFEAVPHPRRIARLPT-SVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGD 205



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 26/283 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
             +VY+WG     Q+          PR +  LP+++  + AG+  +  LD+ G +  +G 
Sbjct: 136 RGRVYSWGRGDEGQLGHGAFEAVPHPRRIARLPTSVVAVGAGRTHSLALDADGAVYSWGC 195

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              G LG  +   Q  P+ V       + +VS C   H   VT++G + +WG   +G+ G
Sbjct: 196 GDDGALGHGDRRRQLAPRAVEFFKTRPAAAVS-CGSRHNAVVTADGALVTWGWAAYGQCG 254

Query: 303 HGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDG---LLYTWGEGDHGRLGHGD 358
                   RP  + + G  G      + G+ H+   T       ++ +G   +G+ G G 
Sbjct: 255 ASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAYGQCG-GS 313

Query: 359 LKSRHTPTLVT-------ELSD---VGAVSCGESHTLV---LSQDGHTVWSMGSGNLGKL 405
             S   P  V        E  D   V A+S G  H++    L   G   ++ G G+ G+L
Sbjct: 314 TCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRHSVCCVRLPGGGTATYAWGRGDDGQL 373

Query: 406 GHED-TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
           G  D   +   P+V  A    RV  V       +A  W   VF
Sbjct: 374 GSGDRRDRRANPRV--AATAARVNSVGQRPLRGLACGWAHTVF 414



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 34/233 (14%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
           A   VY+WGC     +    R +   PR     ++ P+    +  G     ++ + G L+
Sbjct: 186 ADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAA--VSCGSRHNAVVTADGALV 243

Query: 242 VYG---KGWLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVT---SEGEVYSWG 294
            +G    G  G +       P  VPL         ++ C   H L  T   S   ++++G
Sbjct: 244 TWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFG 303

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKR-------VTQVSAGHSHSAAVTE----DGLL 343
              +G+ G G+T S   P+ + G   G +       V  +SAG  HS             
Sbjct: 304 WNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRHSVCCVRLPGGGTAT 362

Query: 344 YTWGEGDHGRLGHGDLKSRHT-PTLVTELSDVGAV--------SCGESHTLVL 387
           Y WG GD G+LG GD + R   P +    + V +V        +CG +HT+ +
Sbjct: 363 YAWGRGDDGQLGSGDRRDRRANPRVAATAARVNSVGQRPLRGLACGWAHTVFV 415


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 143/312 (45%), Gaps = 24/312 (7%)

Query: 241 LVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
             +G G  GL     +  P    L+AA          E H L + +   V+S G    G+
Sbjct: 3   FYWGAGSRGLQRRRTEGSPGAELLQAA--------SGERHALLLLTNSLVHSCGENSRGQ 54

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG         P+ +   L   +   VS G  HS AV   G ++ WG G  G+LG G+LK
Sbjct: 55  LGRRGAPRWDLPEPVQA-LKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELK 113

Query: 361 S-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTP 416
               TP  +T L+ +    VSCG  H+L LS+D   V+S G  + G+LG  ++     +P
Sbjct: 114 EINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQ-VFSWGKNSHGQLGLGKEFPSQPSP 172

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTG 468
           + + +L    + +V AG + S AL+  G  F WG        L  R+  +  + P+ +  
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGA 232

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L +  ++ +S GD H   LSQ  +V+ +G N+ GQ G      P  +  ++V   D  V 
Sbjct: 233 LKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYS--PTPEKRGPQLVERIDGLVS 290

Query: 529 QICAGSLFSIAY 540
           QI  G   +IAY
Sbjct: 291 QIDCGGDHTIAY 302



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 21/272 (7%)

Query: 238 GGLLVYG---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           G +  +G   +G LG+     I   P+++     I  + VS C   H L ++ + +V+SW
Sbjct: 94  GRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSW 152

Query: 294 GVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           G   HG+LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 353 RL---GHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           +L   G       + P  +  L ++G   +SCG+ HT VLSQDG  V++ G  + G+LG+
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDG-KVFTFGDNSSGQLGY 270

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVT 467
             T +   P+++E +     +  C G      +   G V  +G G  ++S   H   L  
Sbjct: 271 SPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSATSKPTHPEALKE 330

Query: 468 G------LSSHQIVDVSIGDSHVLALSQYNEV 493
                  +S+  +VDV +   H+ A    N V
Sbjct: 331 NFDIRCLISADDLVDVQV--KHIFAGKYANFV 360



 Score = 87.0 bits (214), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 17/208 (8%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           + + WG G  G      L+ R T    +  +++   + GE H L+L  +   V S G  +
Sbjct: 1   MYFYWGAGSRG------LQRRRTEG--SPGAELLQAASGERHALLLLTNS-LVHSCGENS 51

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS------ 455
            G+LG     +   P+ ++AL+  +   V  G   S+A+   G VF WG G         
Sbjct: 52  RGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGE 111

Query: 456 -SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
              I+F TP  +T L+  +I+ VS G  H LALS+ ++V++WG N+ GQ G         
Sbjct: 112 LKEINF-TPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQP 170

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P +V  LE + + Q+ AG   S A ++
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 15/173 (8%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEHG 299
               G L L+   +Q    +     A+ +L V    C + H   ++ +G+V+++G    G
Sbjct: 207 SNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSG 266

Query: 300 KLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAA-VTEDGLLYTWGEG 349
           +LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGL----VSQIDCGGDHTIAYVHTTGQVVSFGRG 315


>gi|330836205|ref|YP_004410846.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
           17374]
 gi|329748108|gb|AEC01464.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
           DSM 17374]
          Length = 376

 Score =  117 bits (292), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 100/310 (32%), Positives = 144/310 (46%), Gaps = 36/310 (11%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           + +  I AG + T +L   G L   G    G LG+ N   +  P  V  + A VS     
Sbjct: 33  AKVTAISAGGYHTMILKKDGTLWATGSNYSGALGIGNNENKKTPVLVMPDVAAVS----- 87

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT--LSQRRPKLIMGGLYGKRVTQVSAGHSH 333
             E+H + + ++G +++ G    G+LG G T    +  P  IM       V  VSAG  H
Sbjct: 88  AGESHTMILKNDGTLWATGKNFFGQLGDGATDQADKNTPVQIM-----TDVASVSAGGDH 142

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
           +  V  DG L+  G  D G+LG G    R TP  V  ++DV +VS G +HT++L ++G T
Sbjct: 143 TMIVKTDGTLWATGRNDFGQLGDGTRDGRSTPVRV--MTDVASVSAGYAHTMILKKNG-T 199

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +W  G  N+G+LG    G   TPK I       V  V AG   ++ L  DG ++  G   
Sbjct: 200 LWVTGWNNVGQLGDGTWGYKFTPKQIMT----DVAAVSAGDRHTMILKKDGTLWATGFNL 255

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG-- 505
              LG  +     +TPV V       +  VS GD H + L +   ++A G N  GQ G  
Sbjct: 256 DGQLGDGTDKNHKNTPVRVMT----DVAAVSAGDRHTMILKKDGTLWATGYNGGGQLGDG 311

Query: 506 --QDNFSNPV 513
             +D+ S PV
Sbjct: 312 TDEDHKSTPV 321



 Score = 96.3 bits (238), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 121/249 (48%), Gaps = 25/249 (10%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H + +  +G +++ G    G LG GN  +++ P L+M       V  VSAG SH+  +  
Sbjct: 44  HTMILKKDGTLWATGSNYSGALGIGNNENKKTPVLVM-----PDVAAVSAGESHTMILKN 98

Query: 340 DGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
           DG L+  G+   G+LG G  D   ++TP  +  ++DV +VS G  HT+++  DG T+W+ 
Sbjct: 99  DGTLWATGKNFFGQLGDGATDQADKNTPVQI--MTDVASVSAGGDHTMIVKTDG-TLWAT 155

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G  + G+LG       +TP  +       V  V AG + ++ L  +G ++  G      L
Sbjct: 156 GRNDFGQLGDGTRDGRSTPVRVMT----DVASVSAGYAHTMILKKNGTLWVTGWNNVGQL 211

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           G  +    F    ++T +++     VS GD H + L +   ++A G N  GQ G     N
Sbjct: 212 GDGTWGYKFTPKQIMTDVAA-----VSAGDRHTMILKKDGTLWATGFNLDGQLGDGTDKN 266

Query: 512 PVDQPSKVV 520
             + P +V+
Sbjct: 267 HKNTPVRVM 275



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 19/267 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           ++  G N   Q+ D    +  +     + +++  + AG   T ++ + G L   G+   G
Sbjct: 102 LWATGKNFFGQLGDGATDQADKNTPVQIMTDVASVSAGGDHTMIVKTDGTLWATGRNDFG 161

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
            LG      +  P RV  + A VS        AH + +   G ++  G    G+LG G  
Sbjct: 162 QLGDGTRDGRSTPVRVMTDVASVS-----AGYAHTMILKKNGTLWVTGWNNVGQLGDGTW 216

Query: 307 LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
             +  PK IM       V  VSAG  H+  + +DG L+  G    G+LG G  K+ H  T
Sbjct: 217 GYKFTPKQIM-----TDVAAVSAGDRHTMILKKDGTLWATGFNLDGQLGDGTDKN-HKNT 270

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKF 425
            V  ++DV AVS G+ HT++L +DG T+W+ G    G+LG   D    +TP  + ++   
Sbjct: 271 PVRVMTDVAAVSAGDRHTMILKKDG-TLWATGYNGGGQLGDGTDEDHKSTPVKVTSMGT- 328

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLG 452
            V  V AG  +++ +  +G +  W  G
Sbjct: 329 NVASVSAGGDYTMIVKKNGTL--WATG 353



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 25/263 (9%)

Query: 164 TDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH 223
           TD+ S S       I  TD       ++  G N   Q+ D  R   S P    + +++  
Sbjct: 131 TDVASVSAGGDHTMIVKTD-----GTLWATGRNDFGQLGDGTRDGRSTP--VRVMTDVAS 183

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
           + AG   T +L   G L V G    G LG      +  PK++  + A VS       + H
Sbjct: 184 VSAGYAHTMILKKNGTLWVTGWNNVGQLGDGTWGYKFTPKQIMTDVAAVS-----AGDRH 238

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR-PKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
            + +  +G +++ G    G+LG G   + +  P  +M       V  VSAG  H+  + +
Sbjct: 239 TMILKKDGTLWATGFNLDGQLGDGTDKNHKNTPVRVM-----TDVAAVSAGDRHTMILKK 293

Query: 340 DGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSM 397
           DG L+  G    G+LG G D   + TP  VT + ++V +VS G  +T+++ ++G T+W+ 
Sbjct: 294 DGTLWATGYNGGGQLGDGTDEDHKSTPVKVTSMGTNVASVSAGGDYTMIVKKNG-TLWAT 352

Query: 398 GSGNLGKLGHEDTGKVTTP-KVI 419
           G    G+LG  DT    TP K+I
Sbjct: 353 GRNADGQLGVGDTTNRITPVKII 375


>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
          Length = 957

 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 112/220 (50%), Gaps = 17/220 (7%)

Query: 209 CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG-------LLVYGK---GWLGLANTTIQPL 258
           CS  RL  L      ++  Q    LL  +GG       L  +G+   G LG+        
Sbjct: 58  CSPGRLAVLERGGAGVQVHQ----LLAGSGGARTPSGELFAWGQNLHGQLGVGRKFPSTT 113

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
             ++    A V L+     EAH + ++  G +YSWG  E G+LG G+T S+  P LI  G
Sbjct: 114 TPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIE-G 172

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGA 376
           L  ++V  V+ G SHSA +T+DGLL+T+G G HG+LGH   ++   P LV EL +  V  
Sbjct: 173 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQ 232

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           ++CG  HTL    D   V+S GSG  G+LG+  T     P
Sbjct: 233 IACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 272



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 99/171 (57%), Gaps = 4/171 (2%)

Query: 285 TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           T  GE+++WG   HG+LG G          I+  L G  + Q+SAG +HS A++  G +Y
Sbjct: 87  TPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNL 402
           +WG+ + G+LG G  +S+  P+L+  L +  V  V+CG SH+ +L+QDG  +++ G+G  
Sbjct: 147 SWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDG-LLFTFGAGKH 205

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWGLG 452
           G+LGH  T     P ++  L ++RV ++  G   ++A   D G VF +G G
Sbjct: 206 GQLGHNSTQNELRPCLVAELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSG 256



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 104/204 (50%), Gaps = 12/204 (5%)

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVT 369
           R  ++  G  G +V Q+ AG     A T  G L+ WG+  HG+LG G    S  TP +V 
Sbjct: 62  RLAVLERGGAGVQVHQLLAGSG--GARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVE 119

Query: 370 ELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
            L+ V    +S GE+H++ LS  G+ ++S G    G+LG   T     P +IE L   +V
Sbjct: 120 HLAGVPLAQISAGEAHSMALSMSGN-IYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKV 178

Query: 428 RKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
             V  G S S  LT DGL+F +G G       +S+ +   P LV  L  +++  ++ G  
Sbjct: 179 EFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEYRVTQIACGRW 238

Query: 483 HVLA-LSQYNEVYAWGSNTMGQCG 505
           H LA +S   +V+++GS   GQ G
Sbjct: 239 HTLAYVSDLGKVFSFGSGKDGQLG 262



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 21/190 (11%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 91  ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 145

Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
             +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G ++++G G
Sbjct: 146 YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 203

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
           +HG+LGH +T ++ RP L+   L   RVTQ++ G  H+ A   D G ++++G G  G+LG
Sbjct: 204 KHGQLGHNSTQNELRPCLV-AELVEYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 262

Query: 356 HGDLKSRHTP 365
           +G  + +  P
Sbjct: 263 NGGTRDQLMP 272



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
           +V ++ AG+    A T  G +F WG      LG+     S  TP +V  L+   +  +S 
Sbjct: 74  QVHQLLAGSG--GARTPSGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 131

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           G++H +ALS    +Y+WG N  GQ G  + +   D PS + GL++  V  + C GS
Sbjct: 132 GEAHSMALSMSGNIYSWGKNEFGQLGLGH-TESKDYPSLIEGLDNQKVEFVACGGS 186



 Score = 45.1 bits (105), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)

Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
           ST+TP++  ++    ++      AHS        +Y+WG N   Q+ L     K     +
Sbjct: 111 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLI 170

Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
           + L +  +  +  G   + LL   G L  +G G  G    N+T   L  R  L A +V  
Sbjct: 171 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVEY 228

Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
            V++  C   H L   S+ G+V+S+G G+ G+LG+G T  Q  P
Sbjct: 229 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 272


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 149/316 (47%), Gaps = 21/316 (6%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
           ++ I  G+  T ++   G L + G   KG LG      +P+ +   LE  ++      C 
Sbjct: 39  VQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDRNQYKPV-QVSALETVVIKHVA--CG 95

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           + H L V+  G+V  WG  + G+ G   G+  ++ RP+ I+  L   +  +V  G  HS 
Sbjct: 96  DDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPR-ILKHLASYQFVKVCCGSLHSM 154

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHT--PTLVTELSDVG--AVSCGESHTLVLSQDG 391
           A+T DG L++WG+  +G+LG G L + +T  PT +T L  V    V+CG  H+  L+  G
Sbjct: 155 ALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISG 214

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
            +V+  G  ++G+LG  +      P ++  +R   V+ +  G   +  LT DG VF +G 
Sbjct: 215 -SVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQ 273

Query: 452 GLRS-----SSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G        S+ +   P  V  L    I  V+ G  H L L      +YA+G    GQ G
Sbjct: 274 GSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLG 333

Query: 506 QDNFSNPVDQPSKVVG 521
           QD  +     P +V G
Sbjct: 334 QDE-ARSCSNPQRVPG 348



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 15/258 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C + H L V+   +V  WG  + G+ G   G+  ++ RP+ I+  L   +  +V  G  H
Sbjct: 434 CGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPR-ILRHLASYQFVKVCCGSLH 492

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT--PTLVTELSDVG--AVSCGESHTLVLSQ 389
           S A+T DG L++WG+  +G+LG G L + +T  PT +T L  V    V+CG  H+  L+ 
Sbjct: 493 SMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTI 552

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
            G +V+  G  ++G+LG  +    + P ++  +R   V+ +  G   +  LT DG VF +
Sbjct: 553 SG-SVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 611

Query: 450 GLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQ 503
           G G        S+ +   P  V  L    I  V+ G  H L L      +YA+G    GQ
Sbjct: 612 GQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQ 671

Query: 504 CGQDNFSNPVDQPSKVVG 521
            GQD  +     P +V G
Sbjct: 672 LGQDE-ARSCSNPQRVPG 688



 Score =  108 bits (269), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 170/407 (41%), Gaps = 68/407 (16%)

Query: 188 SKVYTWGCNLHHQILDEVRGKC--------SRPRLQSLPSNIRHIEAGQFC--------T 231
            +V  WG N         RG+C        ++PR    P  ++H+ + QF         +
Sbjct: 106 GQVLGWGRN--------DRGQCGLATGDIENKPR----PRILKHLASYQFVKVCCGSLHS 153

Query: 232 FLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSE 287
             L   G L  +G    G LG+         +   L +   V L    C   H   +T  
Sbjct: 154 MALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTIS 213

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G V+ WG  + G+LG GN  ++  P L+   +  + V  ++ G  H+A +T DG ++ +G
Sbjct: 214 GSVFGWGKNDVGQLGLGNKENKAYPTLLRN-MRSQMVKHIACGQDHTAMLTADGGVFLFG 272

Query: 348 EGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           +G  G+LGHG   +   P  V +L  SD+  V+CG+ HTLVL      +++ G G  G+L
Sbjct: 273 QGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQL 332

Query: 406 GHEDTGKVTTPKVI------------EALRKFR-VRKVCAGT--SFSVAL-TWDGLVFWW 449
           G ++    + P+ +             +  K R VR + AG    FS A    D +    
Sbjct: 333 GQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDIQIKL 392

Query: 450 GLGLRSSSISFH------------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
                S+ I F                    L +  I  V+ GD H LA+S   +V  WG
Sbjct: 393 LFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWG 452

Query: 498 SNTMGQCG---QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            N  GQCG    D  + P  +P  +  L      ++C GSL S+A T
Sbjct: 453 RNDRGQCGLATGDIENKP--RPRILRHLASYQFVKVCCGSLHSMALT 497



 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 120/255 (47%), Gaps = 15/255 (5%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           + WG    G+LG G T  Q   ++   +  L G+RV  +S G  H+  V +DG LY  G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV-WSMGSGNLGKL 405
              G+LG    ++++ P  V+ L  V    V+CG+ HTL +S  G  + W         L
Sbjct: 64  NSKGQLGQD--RNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGL 121

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
              D      P++++ L  ++  KVC G+  S+ALT DG +F WG      LG+ +   +
Sbjct: 122 ATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTN 181

Query: 460 F-HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSK 518
           +   P  +T L    +V V+ G  H  AL+    V+ WG N +GQ G  N  N    P+ 
Sbjct: 182 YTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA-YPTL 240

Query: 519 VVGLEDVCVRQICAG 533
           +  +    V+ I  G
Sbjct: 241 LRNMRSQMVKHIACG 255



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 30/298 (10%)

Query: 184 SVAHSKVYTWGCNLHHQ--ILDE---------VRGKCSRPRLQSLPSN--------IRHI 224
           +++  +V +  C  HH   +LD+          +G+  + R Q  P          I+H+
Sbjct: 33  TLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQDRNQYKPVQVSALETVVIKHV 92

Query: 225 EAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPK-RVPLEAAIVSLSVSKCSEAH 280
             G   T  +   G +L +G+   G  GLA   I+  P+ R+    A        C   H
Sbjct: 93  ACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLH 152

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            + +T +G ++SWG   +G+LG G  ++    RP  +   L G  + +V+ G  HS A+T
Sbjct: 153 SMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTS-LRGVPLVRVACGGFHSFALT 211

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWS 396
             G ++ WG+ D G+LG G+ +++  PTL+  +    V  ++CG+ HT +L+ DG  V+ 
Sbjct: 212 ISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADG-GVFL 270

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGL 453
            G G+ G+LGH        P+ +  L    + +V  G   ++ L    G ++ +G G+
Sbjct: 271 FGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 328



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 15/222 (6%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG--HGDLKSRHTPTLVTELSDVG--AVSC 379
           +  V+ G  H+ AV++   +  WG  D G+ G   GD++++  P ++  L+      V C
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCC 488

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           G  H++ L++DG  ++S G    G+LG     T     P  + +LR   + +V  G   S
Sbjct: 489 GSLHSMALTRDGR-LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHS 547

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
            ALT  G VF WG      LGL +     + P L+  + S  +  ++ G  H   L+   
Sbjct: 548 FALTISGSVFGWGKNDVGQLGLGNKENKSY-PTLLRNMRSQMVKHIACGQDHTAMLTADG 606

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
            V+ +G  + GQ G  +  N V+ P KV+ L    + Q+  G
Sbjct: 607 GVFLFGQGSEGQLGHGSNYNEVN-PRKVIDLMGSDITQVTCG 647



 Score = 49.3 bits (116), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L     K     L+++ S  ++HI  GQ  T +L + GG+ ++G+  
Sbjct: 556 VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGS 615

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT-SEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P++V ++     ++   C + H L +  S+G +Y++G G HG+LG 
Sbjct: 616 EGQLGHGSNYNEVNPRKV-IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQ 674

Query: 304 GNTLSQRRPKLIMG 317
               S   P+ + G
Sbjct: 675 DEARSCSNPQRVPG 688


>gi|402571800|ref|YP_006621143.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus meridiei DSM 13257]
 gi|402252997|gb|AFQ43272.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus meridiei DSM 13257]
          Length = 740

 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT-LSQRRPKLIM 316
           L   V ++A   SLS       H L + S+G V++WG    G+LG+  + L      + +
Sbjct: 36  LAAEVSVQAGSASLSTISAGFVHSLALDSDGSVWAWGDNSEGQLGNNRSDLHNSATPVKV 95

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK---------------S 361
             L    V  V+AG +HS A+ +DG ++ WG  ++G+ G+G ++                
Sbjct: 96  NDL--TNVIAVAAGGAHSLALKKDGTVWGWGNNEYGQGGYGKIELIAGGPSYYMPDEFLR 153

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG-KLGHEDTGKVTTPKVIE 420
            +TP  V  L+D+ A++ G  ++L L  DG TVW+ GS   G +L +   G    P  I+
Sbjct: 154 SYTPLQVQGLTDIIAIAAGMDYSLALKSDG-TVWAWGSEPYGNQLTNTSGGFSNIPAQIQ 212

Query: 421 ----ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTG--LSSHQI 474
                 +   + K+ AG++F++AL  DG V+ WG GL       H  V      LS   +
Sbjct: 213 IDSYGNKLTDITKISAGSAFALALKKDGTVWTWG-GLLVDDQGVHNSVAHAQQVLSLSDV 271

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
           V +S G SH LAL     V+ WGSN + Q G  N +     P ++ GL    V  I AG+
Sbjct: 272 VSISAGYSHSLALKSDGTVWGWGSNDLFQLGDRNSAENWSTPLQISGLNH--VHGIVAGT 329

Query: 535 LFSIA 539
             S+A
Sbjct: 330 YLSMA 334



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 173/401 (43%), Gaps = 52/401 (12%)

Query: 190 VYTWGCNLHHQILD---EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG-----GLL 241
           V+ WG N   Q+ +   ++    +  ++  L +N+  + AG   +  L   G     G  
Sbjct: 68  VWAWGDNSEGQLGNNRSDLHNSATPVKVNDL-TNVIAVAAGGAHSLALKKDGTVWGWGNN 126

Query: 242 VYGKGWLG----LANTTIQPLPKR-----VPLEA-AIVSLSVSKCSEAHVLTVTSEGEVY 291
            YG+G  G    +A      +P        PL+   +  +        + L + S+G V+
Sbjct: 127 EYGQGGYGKIELIAGGPSYYMPDEFLRSYTPLQVQGLTDIIAIAAGMDYSLALKSDGTVW 186

Query: 292 SWGVGEHG-KLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYTWG 347
           +WG   +G +L + +      P  I    YG +   +T++SAG + + A+ +DG ++TWG
Sbjct: 187 AWGSEPYGNQLTNTSGGFSNIPAQIQIDSYGNKLTDITKISAGSAFALALKKDGTVWTWG 246

Query: 348 ------EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
                 +G H  + H           V  LSDV ++S G SH+L L  DG TVW  GS +
Sbjct: 247 GLLVDDQGVHNSVAHAQQ--------VLSLSDVVSISAGYSHSLALKSDG-TVWGWGSND 297

Query: 402 LGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSS 457
           L +LG  ++ +  +TP  I  L    V  + AGT  S+AL  DG V+ WG    G   ++
Sbjct: 298 LFQLGDRNSAENWSTPLQISGLN--HVHGIVAGTYLSMALKTDGTVWSWGANIWGQLGNA 355

Query: 458 ISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             F T      PV V  L    +  ++ G    +A      ++AWG N+ GQ G  ++  
Sbjct: 356 ADFETEPLVKNPVQVKEL--KNVTAIASGFGFNIARQNGGSIWAWGVNSDGQHGNGSYGG 413

Query: 512 PVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSA 552
             +      G           GS  + A+T    N A+ ++
Sbjct: 414 SYEIGDFTGGSSSPVKSSAQVGSFDNTAFTRLAGNDAMDTS 454


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 161/357 (45%), Gaps = 42/357 (11%)

Query: 217 LPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTT---IQPLPKRVPLEAAIVS 270
           L    ++I +G   + ++   G L V G    G LG+ +     +    +    +   V+
Sbjct: 200 LSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVN 259

Query: 271 LSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
             V +  C + H L +  +G+V++WG   H K+G  N  +Q     I+ GL GK++  + 
Sbjct: 260 QKVKQVACGDYHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHID 319

Query: 329 AGHSHSAAVTEDGLLYTWGEG----DHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGES 382
            G  HS A+   G +Y+WG G    + G+ GHG+ +    P  V  ++   +  +S G  
Sbjct: 320 CGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGF 379

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF----------------- 425
           HTL L ++ + +++ GSG  G+ G  +    + PK+++  + F                 
Sbjct: 380 HTLALCEEDNELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSS 439

Query: 426 ---RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               + ++ AG   ++ LT  G V+ +G      LGLRS+  +F +P LV  L S  I  
Sbjct: 440 QKPLITQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTK-NFCSPQLVKDLLSKNIKA 498

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAG 533
           ++ G +H L LS   +++A G    GQ G  N   P  Q + V  L       I AG
Sbjct: 499 IAAGWNHSLILSDKGDLFACGYGNHGQLGL-NDKEPRTQFTHVANLGGKNAYNIYAG 554



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 23/280 (8%)

Query: 252 NTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           N ++ P+ P+++  +      ++   SE      T +  ++S+G    G+LG  +   Q 
Sbjct: 129 NQSVSPVRPQQIEQQKPYSESNLENISEIAKEIKTKKAYIWSFGKNSDGELGISSQKDQF 188

Query: 311 RPK--LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP--T 366
            PK   I           +S+G  HSA VT+ G LY  G   HG+LG   +   H    T
Sbjct: 189 LPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKLGIQSVNGMHVSKFT 248

Query: 367 LVTELS------DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT-GKVTTPKVI 419
            VT          V  V+CG+ HTL L QDG  V++ G     K+G ++   +   P+++
Sbjct: 249 QVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQ-VFAWGGTLHKKVGEKNAQAQNNEPRIV 307

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS---------SSISFHTPVLVTGLS 470
             L+  ++  +  G   SVAL   G V+ WG G  S         ++     P+ V G++
Sbjct: 308 SGLQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIA 367

Query: 471 SHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNF 509
             +IV +S G  H LAL  + NE+YAWGS T G+CG   F
Sbjct: 368 HRKIVQISAGGFHTLALCEEDNELYAWGSGTYGECGLGEF 407



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 16/164 (9%)

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV----RKVCAGTSFSVALTWDGLVFWW 449
           +WS G  + G+LG         PK I +++  ++    + + +G+  S  +T  G ++  
Sbjct: 168 IWSFGKNSDGELGISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSAIVTKAGELYVS 226

Query: 450 G------LGLRSSS---ISFHTPV-LVTGLSSHQIV-DVSIGDSHVLALSQYNEVYAWGS 498
           G      LG++S +   +S  T V +  G+  +Q V  V+ GD H L L Q  +V+AWG 
Sbjct: 227 GSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQVFAWGG 286

Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               + G+ N     ++P  V GL+   +  I  G   S+A  +
Sbjct: 287 TLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALDI 330



 Score = 45.4 bits (106), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 39/184 (21%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN----------------------IRHI 224
           +++Y WG   + +  L E +   S+P++  +P +                      I  I
Sbjct: 389 NELYAWGSGTYGECGLGEFQA-SSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQI 447

Query: 225 EAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA-- 279
            AG   T LL S G +  +G    G LGL +T     P+ V     ++S ++   +    
Sbjct: 448 SAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLV---KDLLSKNIKAIAAGWN 504

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI---MGGLYGKRVTQVSAGHSHSAA 336
           H L ++ +G++++ G G HG+LG    L+ + P+     +  L GK    + AG +HS  
Sbjct: 505 HSLILSDKGDLFACGYGNHGQLG----LNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWV 560

Query: 337 VTED 340
           V +D
Sbjct: 561 VIDD 564


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  117 bits (292), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 16/282 (5%)

Query: 236 STGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV 290
           S  G  VY  GW     LG  + +   +P  +     ++   ++ C ++H L VT + +V
Sbjct: 82  SESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIA-CGDSHCLAVTMDSQV 140

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK-RVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            SWG  ++G+LG G       P+ I   ++ +  +  V+AG  HS A+T+DG LY WG G
Sbjct: 141 LSWGRNQNGELGLGTAEDSLLPQKIQ--IFEEIPIKMVAAGAEHSVAITKDGNLYGWGWG 198

Query: 350 DHGRLGHGDLKSRHTPTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            +G LG GD   R  P  VT   D +  V+CG  HT+ +S  G  +++ G G  G+LGH 
Sbjct: 199 RYGNLGLGDRNDRLLPEKVTVDGDKMAMVACGWRHTICVSSSG-GLYTNGWGKYGQLGHG 257

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSSISFH--TP 463
           D      P+ ++AL    + +V  G   S+ALT  G +  WG    G      +F   +P
Sbjct: 258 DFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSP 317

Query: 464 VLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           + V      ++  +S G  H +A+++   VY+WG    GQ G
Sbjct: 318 MQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLG 359



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 23/292 (7%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P+RV L +A  S         H + + S   V SWG GE G+LGHG+T  +  P  +   
Sbjct: 13  PRRVLLVSAGAS---------HSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLS-A 62

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGL-LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VG 375
           L G+ +  V+ G  H+ A +E G  +Y+WG GD GRLGHGD      P  +  L    + 
Sbjct: 63  LDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQ 122

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            ++CG+SH L ++ D   + S G    G+LG         P+ I+   +  ++ V AG  
Sbjct: 123 QIACGDSHCLAVTMDSQVL-SWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAE 181

Query: 436 FSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            SVA+T DG ++ WG G R  ++          P  VT +   ++  V+ G  H + +S 
Sbjct: 182 HSVAITKDGNLYGWGWG-RYGNLGLGDRNDRLLPEKVT-VDGDKMAMVACGWRHTICVSS 239

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              +Y  G    GQ G  +F + +  P KV  L D  + Q+  G   S+A T
Sbjct: 240 SGGLYTNGWGKYGQLGHGDFEDHL-VPRKVQALSDKFISQVSGGWRHSMALT 290



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 13/209 (6%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           I+ + AG   +  +   G L  YG GW     LGL +   + LP++V ++     +++  
Sbjct: 173 IKMVAAGAEHSVAITKDGNL--YGWGWGRYGNLGLGDRNDRLLPEKVTVDGD--KMAMVA 228

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + V+S G +Y+ G G++G+LGHG+      P+ +   L  K ++QVS G  HS 
Sbjct: 229 CGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQA-LSDKFISQVSGGWRHSM 287

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           A+T  G L  WG    G++G G+     +P  V    D  V  +SCG  HT+ +++    
Sbjct: 288 ALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTER-EN 346

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           V+S G G  G+LG+ +T     P +IEA 
Sbjct: 347 VYSWGRGANGQLGNGETIDRNVPTIIEAF 375



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 13/156 (8%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGKGW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
           +  G   T  + S+GGL  Y  GW     LG  +     +P++V    A+    +S+ S 
Sbjct: 227 VACGWRHTICVSSSGGL--YTNGWGKYGQLGHGDFEDHLVPRKV---QALSDKFISQVSG 281

Query: 279 A--HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
              H + +TS G++  WG  + G++G GN      P + +   + ++V  +S G  H+ A
Sbjct: 282 GWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSP-MQVNFPHDQKVQMISCGWRHTIA 340

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS 372
           VTE   +Y+WG G +G+LG+G+   R+ PT++   S
Sbjct: 341 VTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFS 376


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 143/312 (45%), Gaps = 24/312 (7%)

Query: 241 LVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
             +G G  GL     +  P    L+AA          E H L + +   V+S G    G+
Sbjct: 3   FYWGAGSRGLQRRRTEGSPGAELLQAA--------SGERHALLLLTNSLVHSCGENSRGQ 54

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG         P+ +   L   +   VS G  HS AV   G ++ WG G  G+LG G+LK
Sbjct: 55  LGRRGAPRWDLPEPVQA-LKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELK 113

Query: 361 S-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTP 416
               TP  +T L+ +    VSCG  H+L LS+D   V+S G  + G+LG  ++     +P
Sbjct: 114 EINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQ-VFSWGKNSHGQLGLGKEFPSQPSP 172

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--------LGLRSSSISFHTPVLVTG 468
           + + +L    + +V AG + S AL+  G  F WG        L  R+  +  + P+ +  
Sbjct: 173 QRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGA 232

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L +  ++ +S GD H   LSQ  +V+ +G N+ GQ G      P  +  ++V   D  V 
Sbjct: 233 LKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYS--PTPEKRGPQLVERIDGLVS 290

Query: 529 QICAGSLFSIAY 540
           QI  G   +IAY
Sbjct: 291 QIDCGGDHTIAY 302



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 21/272 (7%)

Query: 238 GGLLVYG---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
           G +  +G   +G LG+     I   P+++     I  + VS C   H L ++ + +V+SW
Sbjct: 94  GRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSW 152

Query: 294 GVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           G   HG+LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 353 RL---GHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           +L   G       + P  +  L ++G   +SCG+ HT VLSQDG  V++ G  + G+LG+
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDG-KVFTFGDNSSGQLGY 270

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVT 467
             T +   P+++E +     +  C G      +   G V  +G G  ++S   H   L  
Sbjct: 271 SPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFGRGPSATSKPTHPEALKE 330

Query: 468 G------LSSHQIVDVSIGDSHVLALSQYNEV 493
                  +S+  +VDV +   H+ A    N V
Sbjct: 331 NFDIRCLISADDLVDVQV--KHIFAGKYANFV 360



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 17/208 (8%)

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
           + + WG G  G      L+ R T    +  +++   + GE H L+L  +   V S G  +
Sbjct: 1   MYFYWGAGSRG------LQRRRTEG--SPGAELLQAASGERHALLLLTNS-LVHSCGENS 51

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS------ 455
            G+LG     +   P+ ++AL+  +   V  G   S+A+   G VF WG G         
Sbjct: 52  RGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGE 111

Query: 456 -SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
              I+F TP  +T L+  +I+ VS G  H LALS+ ++V++WG N+ GQ G         
Sbjct: 112 LKEINF-TPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQP 170

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P +V  LE + + Q+ AG   S A ++
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 15/173 (8%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEHG 299
               G L L+   +Q    +     A+ +L V    C + H   ++ +G+V+++G    G
Sbjct: 207 SNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSG 266

Query: 300 KLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAA-VTEDGLLYTWGEG 349
           +LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 267 QLGYSPTPEKRGPQLVERIDGL----VSQIDCGGDHTIAYVHTTGQVVSFGRG 315


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 157/342 (45%), Gaps = 38/342 (11%)

Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSV---SKCS 277
           + AG   T LL STG +   G    G  G   T    +  RVP++    ++ V   + C 
Sbjct: 269 VAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCE 328

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             H L V  +G++ S+G    G+LG GNT S+  PK + G L G RVTQ S  + HS   
Sbjct: 329 --HTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYHSVIA 385

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVW 395
            ++G +YT+G  D G+LG GD+  R  P LV  L    +  ++CG+ HT+V + +   V 
Sbjct: 386 CDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLE-IGVQ 444

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKF----------RVRKVCAGTSFSVALTWDGL 445
           S G  + G+LG E T         E+ RKF          +VR V  G   ++ LT +  
Sbjct: 445 SCGKNDYGQLGLEST---------ESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEH 495

Query: 446 VFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           VF +G      LGL  ++     P ++ G     +  +S G  H + +     ++ +G N
Sbjct: 496 VFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRN 555

Query: 500 TMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             GQ G  + +N    P  V       + ++ AG   +I  T
Sbjct: 556 HHGQLGTGD-TNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 17/218 (7%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH-----IEAGQFCTFLLDST 237
           I+  + +VYT+G N   Q+     G     +L  L  ++R      +  GQ+ T +    
Sbjct: 384 IACDNGEVYTFGRNDFGQLGS---GDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLE 440

Query: 238 GGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS--KCSEAHVLTVTSEGEVYS 292
            G+   GK   G LGL +T  Q   K V ++  +    V   +C   H + +T+E  V+ 
Sbjct: 441 IGVQSCGKNDYGQLGLESTESQR--KFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFG 498

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           +G  ++G+LG G+T  +     I+ G   K V ++SAG  H+  +  DG+L+ +G   HG
Sbjct: 499 FGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHG 558

Query: 353 RLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLS 388
           +LG GD   RH+P  V+      +  V+ G  HT+VL+
Sbjct: 559 QLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596



 Score = 75.1 bits (183), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 17/276 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           CS  H      E EV++ G   +G+LGH +T   R+   ++    G+ V  V+AG+ H+ 
Sbjct: 225 CSSFH------EREVWTCGQNSYGELGHSDT-GTRKTHCLVKPFEGREVVDVAAGNEHTV 277

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSC----GESHTLVLSQDG 391
            +   G +YT G  D+G+ G G  +     T V       AV      G  HTLV+  DG
Sbjct: 278 LLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDG 337

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             + S G    G+LG  +T     PK +  L   RV +       SV    +G V+ +G 
Sbjct: 338 Q-MMSFGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGR 396

Query: 451 --LGLRSSS--ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              G   S   I    P LV  L   +I  ++ G  H +  +    V + G N  GQ G 
Sbjct: 397 NDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGL 456

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           ++  +     +    L+   VR +  G   +I  T 
Sbjct: 457 ESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTA 492


>gi|433547476|ref|ZP_20503684.1| hypothetical protein D478_27117 [Brevibacillus agri BAB-2500]
 gi|432181233|gb|ELK38926.1| hypothetical protein D478_27117 [Brevibacillus agri BAB-2500]
          Length = 286

 Score =  116 bits (291), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 18/246 (7%)

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           P+ AA  ++S S     H L +  +G V+SWG    G+LG G T+ Q  P  + G     
Sbjct: 28  PVSAAENAVS-SAAGSRHSLVLKGDGTVWSWGDNAAGQLGDGTTIQQNVPVQVKGL---T 83

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
            VT+++AG S S A+  DG +++WG+   G+LG+G   + +TP     L+DV  ++ G +
Sbjct: 84  NVTRIAAGSSFSVALKADGTVWSWGDNGFGQLGNGKTSTSNTPVQAVGLTDVIEIAAGTN 143

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H L L +DG TVW       GKL +       TP  +  +    V+++ AG++F++A+  
Sbjct: 144 HGLALKKDG-TVWLW-----GKLLNS---SYNTPFQVGGIAD--VKEIAAGSNFNLAVKK 192

Query: 443 DGLVFWW---GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
           DG V+ W   G G    +  + TP      +   IV V+ G+    AL    +VYAWG N
Sbjct: 193 DGTVWAWGNNGFGQLGINNIYDTPSPTKIGTLANIVSVAAGEFSGYALDVDGKVYAWGHN 252

Query: 500 TMGQCG 505
             G+ G
Sbjct: 253 GYGRLG 258



 Score =  110 bits (275), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 13/216 (6%)

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           +AG  HS  +  DG +++WG+   G+LG G    ++ P  V  L++V  ++ G S ++ L
Sbjct: 39  AAGSRHSLVLKGDGTVWSWGDNAAGQLGDGTTIQQNVPVQVKGLTNVTRIAAGSSFSVAL 98

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
             DG TVWS G    G+LG+  T    TP  ++A+    V ++ AGT+  +AL  DG V+
Sbjct: 99  KADG-TVWSWGDNGFGQLGNGKTSTSNTP--VQAVGLTDVIEIAAGTNHGLALKKDGTVW 155

Query: 448 WWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
            WG  L SS   ++TP  V G++   + +++ G +  LA+ +   V+AWG+N  GQ G +
Sbjct: 156 LWGKLLNSS---YNTPFQVGGIAD--VKEIAAGSNFNLAVKKDGTVWAWGNNGFGQLGIN 210

Query: 508 N-FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           N +  P   P+K+  L ++    + AG     A  V
Sbjct: 211 NIYDTP--SPTKIGTLANIV--SVAAGEFSGYALDV 242



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 80/214 (37%), Gaps = 14/214 (6%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWGCNLHHQILD 203
            D+    LGD  +   N  +       +T     +  SVA      V++WG N   Q+ +
Sbjct: 58  GDNAAGQLGDGTTIQQNVPVQVKGLTNVTRIAAGSSFSVALKADGTVWSWGDNGFGQLGN 117

Query: 204 EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVP 263
                 + P      +++  I AG      L   G + ++GK      NT  Q       
Sbjct: 118 GKTSTSNTPVQAVGLTDVIEIAAGTNHGLALKKDGTVWLWGKLLNSSYNTPFQV------ 171

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               I  +          L V  +G V++WG    G+LG  N      P  I G L    
Sbjct: 172 --GGIADVKEIAAGSNFNLAVKKDGTVWAWGNNGFGQLGINNIYDTPSPTKI-GTL--AN 226

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +  V+AG     A+  DG +Y WG   +GRLG G
Sbjct: 227 IVSVAAGEFSGYALDVDGKVYAWGHNGYGRLGDG 260


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  116 bits (291), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 85/266 (31%), Positives = 130/266 (48%), Gaps = 16/266 (6%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EV+ +G G+ G+LG G+T     P+L+ G L  + V  ++AG  H+AAVT DG LY  G 
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKG-LKSRDVVNLAAGALHTAAVTSDGELYVMGS 59

Query: 349 GDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            +  +LG         PT VT L    V  V+CG +HTL +  DG  V + GS   G++G
Sbjct: 60  NEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVV-DGGAVAAFGSAEYGQVG 118

Query: 407 HEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISF 460
               G +V  P+V++ LR   + +V AG S ++AL+  G VF  G G      R ++   
Sbjct: 119 LGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGN 178

Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG-----QCGQDNFSNPVDQ 515
             P  ++ L    +V ++ G++H  A++    V  WG           CG  +F N    
Sbjct: 179 DVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGHGDFEN-CST 237

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYT 541
           P  V  L+ +  RQ+  G   ++  T
Sbjct: 238 PKPVQALKGIVGRQVSCGDDHTVLLT 263



 Score =  106 bits (264), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 16/252 (6%)

Query: 212 PRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEA 266
           PRL + L S ++ ++ AG   T  + S G L V G   +  LG+   +    P RV    
Sbjct: 24  PRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDALAPTRV---T 80

Query: 267 AIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           A+    V +  C  AH L V   G V ++G  E+G++G G   ++     ++  L    +
Sbjct: 81  ALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHI 140

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGES 382
            +V+AG SH+ A++  G +++ G G  G LG G  +    P  ++ L  +G V  +CGE+
Sbjct: 141 VRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGEN 200

Query: 383 HTLVLSQDGHTV-WSMGSGNL---GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           H+  ++ DG  + W  G   L      GH D    +TPK ++AL+    R+V  G   +V
Sbjct: 201 HSAAITADGRVLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTV 260

Query: 439 ALTWDGLVFWWG 450
            LT DG V+ WG
Sbjct: 261 LLTEDGSVYAWG 272



 Score =  104 bits (259), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 21/234 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI---MGGLYGKRVTQVSAGHSHSAA 336
           H   VTS+GE+Y  G  E  +LG    + QR   L    +  L   +V +V+ G +H+ A
Sbjct: 44  HTAAVTSDGELYVMGSNEESQLG----VRQRSDALAPTRVTALEQFQVQRVACGPAHTLA 99

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           V + G +  +G  ++G++G G   +R   P +V +L    +  V+ G SHTL LS  G  
Sbjct: 100 VVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTG-G 158

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           V+S G+G+ G LG   T     P+ I  L    V ++  G + S A+T DG V  WG G 
Sbjct: 159 VFSCGNGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGK 218

Query: 454 RSSSISFH----------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
                +FH          TP  V  L       VS GD H + L++   VYAWG
Sbjct: 219 HRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 20/247 (8%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           V++      E H L + ++G+V+S G   +G+LG G           +      R+ Q+S
Sbjct: 47  VTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQIS 106

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           AG SHS AV++DG L+ WG   HG+L   GD+    TP  V  L +   V+CG SHT+ L
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSL 166

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           +         G G +   G +  G++  +P  +E      + ++ AG  F++ALT  G +
Sbjct: 167 N---------GGGRVFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTL 217

Query: 447 FWWGLGLRSSSISFH-----TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           F WG        +F       P  V  ++S  +V V  GDSH +AL+    V++ GS++ 
Sbjct: 218 FAWGRNEEGQLGNFTNRDVINPREVPNINS--VVVVECGDSHSIALTHEGRVFSCGSDSF 275

Query: 502 GQ--CGQ 506
           GQ  CGQ
Sbjct: 276 GQLGCGQ 282



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 289 EVYSWGVGEHGKLGH-----GNTLSQR-RPKLIMG---GLYGKRVTQVSAGHSHSAAVTE 339
           ++Y +G    G+L       GN       P L+ G   G +G  V  V++G  H+  +  
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRH---TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           DG +++ G   +G LG G +K       P  ++    +  +S G SH++ +S DG  +++
Sbjct: 65  DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGR-LFA 123

Query: 397 MGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            GS + G+L    D     TPK + +L +    +V  G S +V+L   G VF W  G +S
Sbjct: 124 WGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIW--GQQS 179

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVD 514
                H+P  V    S  I+ +S G+   +AL+    ++AWG N  GQ G  NF+N  V 
Sbjct: 180 DGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLG--NFTNRDVI 237

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            P +V  +  V V  +  G   SIA T
Sbjct: 238 NPREVPNINSVVV--VECGDSHSIALT 262



 Score = 84.3 bits (207), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 18/234 (7%)

Query: 165 DIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR-- 222
           DI  + TPK   ++ +T + VA    +T   N   ++   + G+ S  R++  P+ +   
Sbjct: 137 DILISDTPKRVPSLPET-VQVACGASHTVSLNGGGRVF--IWGQQSDGRIRHSPAEVELF 193

Query: 223 ------HIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPL--PKRVPLEAAIVSLSV 273
                  I AG   T  L ++G L  +G+   G L N T + +  P+ VP    I S+ V
Sbjct: 194 VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVP---NINSVVV 250

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            +C ++H + +T EG V+S G    G+LG G     +     +  + G  VT+++ G  H
Sbjct: 251 VECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCH 310

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           +  V  +G ++T+G   +G+LGHG+ +++ TP ++  + +V +V  G   +  L
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASVFAGWDQSFCL 363



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 22/259 (8%)

Query: 189 KVYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +++ WG N H Q+    ++    +  R+ SLP  ++ +  G   T  L+  G + ++G+ 
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ-VACGASHTVSLNGGGRVFIWGQQ 178

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTV--TSEGEVYSWGVGEHGKLGHG 304
               ++  I+  P  V L    VS+ + + S  ++ T+  T+ G +++WG  E G+LG+ 
Sbjct: 179 ----SDGRIRHSPAEVEL---FVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRH 363
                  P+ +        V  V  G SHS A+T +G +++ G    G+LG G   +S++
Sbjct: 232 TNRDVINPREVPNI---NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQN 288

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
               +TE+  S V  ++CG  HT+V++      + + S   G+LGH +T    TP++I++
Sbjct: 289 CMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGLNSN--GQLGHGNTRNQITPRMIDS 346

Query: 422 LRKFRVRKVCAGTSFSVAL 440
           +    V  V AG   S  L
Sbjct: 347 VEN--VASVFAGWDQSFCL 363



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 16/190 (8%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKC 276
           I  I AG+  +  +   G L  +G    G L ++ +  I   PKRVP     V ++   C
Sbjct: 102 IIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVA---C 158

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
             +H +++   G V+ WG    G++ H    S    +L +       + Q+SAG+  + A
Sbjct: 159 GASHTVSLNGGGRVFIWGQQSDGRIRH----SPAEVELFVS----VPIIQISAGNLFTMA 210

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +T  G L+ WG  + G+LG+   +    P  V  ++ V  V CG+SH++ L+ +G  V+S
Sbjct: 211 LTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGR-VFS 269

Query: 397 MGSGNLGKLG 406
            GS + G+LG
Sbjct: 270 CGSDSFGQLG 279


>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
          Length = 653

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 40/326 (12%)

Query: 240 LLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           L  +G G    LG  NT IQ LP +V         SVS  ++ H + V++ GEVY+WG G
Sbjct: 156 LFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVS-AAKFHSVAVSARGEVYTWGFG 214

Query: 297 EHGKLGH------GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
             G+LGH          +   P+ +  GL  +RV  ++A   H+   TE G ++TWG   
Sbjct: 215 RGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNR 274

Query: 351 HGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
            G+LG+  + ++  P  V+ L S + AV+    HT V+S+ G  V++ G    G+LG+  
Sbjct: 275 EGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGE-VFTWGCNKKGQLGYGT 333

Query: 410 TGKVT--TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLV- 466
           +   +  TP+V+E L+   ++ V A    ++ L  DG +F WG  L    ++    V+V 
Sbjct: 334 SNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRL----VTPRRVVIVR 389

Query: 467 -------TGLSSHQ---IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                  T L  HQ   +V ++ G  H +AL++   ++ W S           S+P  + 
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVS-----------SDPDLRC 438

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTV 542
            +V  L    V  I AG  +  A T 
Sbjct: 439 QQVYSLCGRTVSSISAGKYWIAAVTA 464



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 23/263 (8%)

Query: 251 ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQR 310
           A+ T++    R+P++  +VS  V +   +   +V +E  ++SWG G + +LG GNT  Q+
Sbjct: 121 ASITLEDSRSRIPVD--LVSGPVFQVVGSERDSVATE--LFSWGSGVNYQLGTGNTHIQK 176

Query: 311 RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRH----T 364
            P   +  L+G  +  VSA   HS AV+  G +YTWG G  GRLGH   D+ S      T
Sbjct: 177 LP-CKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235

Query: 365 PTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           P  VT       V A++  + HT+V ++ G  V++ GS   G+LG+        P+ + +
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGE-VFTWGSNREGQLGYTSVDTQPIPRRVSS 294

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQI 474
           L K ++  V A    +  ++  G VF WG   +       S+S S +TP +V  L    +
Sbjct: 295 L-KSKIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVL 353

Query: 475 VDVSIGDSHVLALSQYNEVYAWG 497
             V+    H + L    E++ WG
Sbjct: 354 KGVAAAKYHTIVLGADGEIFTWG 376



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 71/233 (30%)

Query: 186 AHSKVYTWGCN----LHHQILDEVRGKCS--RPRLQSL---PSNIRHIEAGQFCTFLLDS 236
           A  +VYTWG      L H   D   G+ +   PR  ++      ++ I A +  T +   
Sbjct: 204 ARGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATE 263

Query: 237 TGGLLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G +  +G   +G LG  +   QP+P+RV  L++ IV+++    +  H   ++  GEV++
Sbjct: 264 GGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIVAVA---AANKHTAVISESGEVFT 320

Query: 293 WGVGEHGKLGHG--NTLSQRRPK--------------------LIMGG-----LYGKR-- 323
           WG  + G+LG+G  N+ S   P+                    +++G       +G R  
Sbjct: 321 WGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRLV 380

Query: 324 --------------------------VTQVSAGHSHSAAVTEDGLLYTWGEGD 350
                                     V  ++AG  HS A+TEDG ++ W   D
Sbjct: 381 TPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYWVSSD 433



 Score = 41.6 bits (96), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 55/260 (21%)

Query: 156 DRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS-----------KVYTWGCNLHHQILDE 204
           +R+     T +D+   P+   ++    ++VA +           +V+TWGCN   Q+   
Sbjct: 273 NREGQLGYTSVDTQPIPRRVSSLKSKIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYG 332

Query: 205 VRGKCSR--PRL-QSLPSNI-RHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTI----- 255
                S   PR+ + L   + + + A ++ T +L + G +  +G   +      I     
Sbjct: 333 TSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWGHRLVTPRRVVIVRNLK 392

Query: 256 --QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
                P +      +VS++       H + +T +G ++ W   +              P 
Sbjct: 393 KNGSTPLKFHQRLHVVSIAAGMV---HSMALTEDGAIFYWVSSD--------------PD 435

Query: 314 LIMGGLY---GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE 370
           L    +Y   G+ V+ +SAG    AAVT  G +Y W +G          K + T  + T 
Sbjct: 436 LRCQQVYSLCGRTVSSISAGKYWIAAVTATGDVYMW-DGK---------KDKDTTPVATR 485

Query: 371 LSDVG---AVSCGESHTLVL 387
           L  V    +VS GE+H L++
Sbjct: 486 LHGVKRSTSVSVGETHLLIV 505


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           R +S+     I  I  G + +  L   G L  +G+   G LG+          ++    A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            V L+     EAH + ++  G +YSWG  E G+LG G+T S+  P LI   L  + V  +
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLI-EALDNQEVEFL 248

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTL 385
           + G SHSA +T+DGLL+T+G G HG+LGH   ++   P LV EL  + V  ++CG  HTL
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTL 308

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               D   V+S GSG  G+LG+  T     P
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGNGGTRDQLIP 339



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG G  +S+  P+L+  L   +V  ++CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           H+ +L+QDG  +++ G+G  G+LGH  T     P ++  L   RV ++  G   ++A   
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 23/256 (8%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           PK + L   +   SV + +E H+L ++S+G+ + +       L   + L +         
Sbjct: 88  PKCIKLGKNMKIHSVDQGAE-HMLILSSDGKPFEYDNYSMKHLRFESILQE--------- 137

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--G 375
              K++ Q++ G  HS A+++ G L+ WG+  HG+LG G    S  TP +V  L+ V   
Sbjct: 138 ---KKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            +S GE+H++ LS  G+ ++S G    G+LG   T     P +IEAL    V  +  G S
Sbjct: 195 QISAGEAHSMALSMSGN-IYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGS 253

Query: 436 FSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQ 489
            S  LT DGL+F +G G       +S+ +   P LV  L  +++  ++ G  H LA +S 
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSD 313

Query: 490 YNEVYAWGSNTMGQCG 505
             +V+++GS   GQ G
Sbjct: 314 LGKVFSFGSGKDGQLG 329



 Score = 84.0 bits (206), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 23/191 (12%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
           +++ WG NLH Q+     G   +    + P  + H        I AG+  +  L  +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212

Query: 241 LVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS--KCSEAHVLTVTSEGEVYSWGV 295
             +GK   G LGL +T  +  P  +    A+ +  V    C  +H   +T +G ++++G 
Sbjct: 213 YSWGKNEFGQLGLGHTESKDYPSLI---EALDNQEVEFLACGGSHSALLTQDGLLFTFGA 269

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRL 354
           G+HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G G  G+L
Sbjct: 270 GKHGQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQL 328

Query: 355 GHGDLKSRHTP 365
           G+G  + +  P
Sbjct: 329 GNGGTRDQLIP 339



 Score = 60.8 bits (146), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + +V  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S  TP +V  L+   +  +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G  + +   D PS +  L++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNEFGQLGLGH-TESKDYPSLIEALDNQEVEFLACGGS 253



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
           +G   TPK I+  +  ++  V  G    + L+ DG  F         + S       + L
Sbjct: 82  SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF------EYDNYSMKHLRFESIL 135

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
              +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195

Query: 530 ICAGSLFSIAYTV 542
           I AG   S+A ++
Sbjct: 196 ISAGEAHSMALSM 208


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +  L+D+    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ V  L +  +V +S GD+H   L+Q  +V+ +G N  GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 42/329 (12%)

Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R   Q   LP  I+ +E         G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   VGA        +SCG++HT VL+QDG  V++ G    G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H   L     
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFD 333

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S+   VDV +   H+ A +  N V
Sbjct: 334 ISCLISAEDFVDVQV--KHIFAGTYANFV 360



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           + WG            L +RR      G  G  + Q ++G  HS  +  +  + + G+  
Sbjct: 3   FCWG-------ADSRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +    P  +  L    V  VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++ TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      + PV  ++P  V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVVYISCG 244



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +  L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 37/236 (15%)

Query: 171 TPKLTYNIGDTDI---SVAH---------SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQS 216
           TPK    + D  I   S  H         S+V++WG N H Q  +  E   + S  R++S
Sbjct: 118 TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS 177

Query: 217 LPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE-AAIVSL 271
           L    +  + AG   +F L   G    +G    G L L+   + P+    PL   A+ +L
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV-PVQSNKPLSVGALKNL 236

Query: 272 SVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQV 327
            V    C +AH   +T +G+V+++G    G+LG+  T  +R P+L+  + GL    V+Q+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL----VSQI 292

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGE 381
             G  H+ A       Y    G     GHG  D      P  +TE  D+  +   E
Sbjct: 293 DCGSYHTLA-------YVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAE 341


>gi|379721973|ref|YP_005314104.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
 gi|378570645|gb|AFC30955.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
          Length = 337

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 156/320 (48%), Gaps = 22/320 (6%)

Query: 194 GCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLG 249
           G   H Q+ D  +     P  +++L S I  I AG   +F + S G    +G    G LG
Sbjct: 4   GSQQHAQLGDGTKTDRYSPIPVKNLDSVI-GISAGGAASFAVRSDGTAWAWGSNLFGQLG 62

Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
              T  +  P +V    ++V+L   +   +H L V ++G V++WG   +G+LG G T S+
Sbjct: 63  DGTTYDRLTPVQVQGLHSVVAL---EAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTDSR 119

Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
             P  +   L    V  V+AG  HS AV  DG ++ WG    G+LG G       P  VT
Sbjct: 120 STPVQVQ-AL--DSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVT 176

Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRK 429
            L  V +VS G + +  L  DG TVW+ G+ + G+LG E T    +P  ++         
Sbjct: 177 GLGSVVSVSAGNTFSSALKSDG-TVWAWGANDSGQLGSE-TAASNSPSPVQVTGMASAAA 234

Query: 430 VCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
           + +G+ +S+AL  DG V+ WG      LG   ++ S   PV VT L S  +V V+ G  H
Sbjct: 235 ISSGSDYSLALKNDGTVWAWGYNSSGQLG-NGTTTSSSAPVQVTRLGS--VVSVAAGPLH 291

Query: 484 VLALSQYNEVYAWGSNTMGQ 503
            LA+     V+ WG+NT GQ
Sbjct: 292 GLAVQSGGTVWDWGNNTYGQ 311



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 132/267 (49%), Gaps = 17/267 (6%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           A    V S+G  ++WG    G+LG G T  +  P  + G L+   V  + AG SHS AV 
Sbjct: 39  AASFAVRSDGTAWAWGSNLFGQLGDGTTYDRLTPVQVQG-LH--SVVALEAGSSHSLAVK 95

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
            DG ++ WG   +G+LG G   SR TP  V  L  V AV+ G  H+L +  DG +VW+ G
Sbjct: 96  ADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADG-SVWAWG 154

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
           +   G+LG     + T P  +  L    V  V AG +FS AL  DG V+ WG      LG
Sbjct: 155 ANWSGQLGDGTYTESTVPVQVTGLGS--VVSVSAGNTFSSALKSDGTVWAWGANDSGQLG 212

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
             +++ +  +PV VTG++S   +       + LAL     V+AWG N+ GQ G +  +  
Sbjct: 213 SETAASNSPSPVQVTGMASAAAISSGS--DYSLALKNDGTVWAWGYNSSGQLG-NGTTTS 269

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSIA 539
              P +V  L  V    + AG L  +A
Sbjct: 270 SSAPVQVTRLGSVV--SVAAGPLHGLA 294



 Score =  100 bits (249), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 117/231 (50%), Gaps = 13/231 (5%)

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
           +H +LG G T + R   + +  L    V  +SAG + S AV  DG  + WG    G+LG 
Sbjct: 7   QHAQLGDG-TKTDRYSPIPVKNL--DSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGD 63

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           G    R TP  V  L  V A+  G SH+L +  DG +VW+ G    G+LG   T   +TP
Sbjct: 64  GTTYDRLTPVQVQGLHSVVALEAGSSHSLAVKADG-SVWAWGWNTYGQLGDGTTDSRSTP 122

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSS 471
             ++AL    V  V AG+  S+A+  DG V+ WG      L   + +  T PV VTGL S
Sbjct: 123 VQVQALDS--VVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGTYTESTVPVQVTGLGS 180

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
             +V VS G++   AL     V+AWG+N  GQ G +  ++    P +V G+
Sbjct: 181 --VVSVSAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPSPVQVTGM 229



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 11/224 (4%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG 244
           A   V+ WG N + Q+ D      S P ++Q+L S +  + AG   +  + + G +  +G
Sbjct: 96  ADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQALDS-VVAVAAGSGHSLAVKADGSVWAWG 154

Query: 245 KGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             W   LG    T   +P +V    ++VS+S      +    + S+G V++WG  + G+L
Sbjct: 155 ANWSGQLGDGTYTESTVPVQVTGLGSVVSVSAGNTFSS---ALKSDGTVWAWGANDSGQL 211

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G     S     + + G+       +S+G  +S A+  DG ++ WG    G+LG+G   S
Sbjct: 212 GSETAASNSPSPVQVTGM--ASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTS 269

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              P  VT L  V +V+ G  H L + Q G TVW  G+   G+L
Sbjct: 270 SSAPVQVTRLGSVVSVAAGPLHGLAV-QSGGTVWDWGNNTYGQL 312


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  116 bits (291), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 104/385 (27%), Positives = 162/385 (42%), Gaps = 20/385 (5%)

Query: 184 SVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLL 241
           +VA   +  WG N   Q  +        P    LP  + +  I      +  L S G +L
Sbjct: 51  AVATDTILAWGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVL 110

Query: 242 VYGK---GWLGLANT--TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
            +G    G LG   T  +  P+P R+P+   + +++      +H L +T+ G V++WG  
Sbjct: 111 AWGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGT---SHSLAITATGAVFAWGDN 167

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
             G+LG G T     P  +   + G  VT ++ G  HS AV   G    WG    G+LG 
Sbjct: 168 AVGQLGDGTTTDSSLPVPVRLPV-GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGD 226

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           G      TP  V +L  V AV+ G+ H+L L+  G TV++ G+ + G+LG   T   +TP
Sbjct: 227 GTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTG-TVYAWGANSFGQLGDGSTSDSSTP 285

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLS 470
             +          V +G   S+ALT  G    WG      LG   +++   TPV V    
Sbjct: 286 IAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLG-NGATVGSSTPVAVRVPG 344

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
              +  V+I   H +A++      AW  N  GQ G    ++   +P  V       +  +
Sbjct: 345 GATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDS-SEPVAVSLPAGTAITAV 403

Query: 531 CAGSLFSIAYTVPPSNSALSSAFTP 555
             G   S+A     + S  +   +P
Sbjct: 404 AVGDDHSLALVDAQATSTTTLRISP 428



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 7/145 (4%)

Query: 367 LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
           +VT     G +  G   T   +    T+ + G  + G+ G+  T    TP  +       
Sbjct: 30  VVTVTQAAGVLPAGAQRTPTAAVATDTILAWGDNSFGQFGNGTTASSRTPVPVRLPVGTT 89

Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIG 480
           V  +    + S+ALT  G V  WG      LG   ++ S  TPV V       +  ++ G
Sbjct: 90  VTAIAGSDTHSLALTSVGTVLAWGGNSFGQLG-DGTTASSRTPVPVRLPVGTTVTAIAAG 148

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCG 505
            SH LA++    V+AWG N +GQ G
Sbjct: 149 TSHSLAITATGAVFAWGDNAVGQLG 173


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 18/304 (5%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           S ++ I  G   T  L + G +   G      LG    T +PLP  +P   A V + ++ 
Sbjct: 36  SPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP--IPELQAYVVIQIA- 92

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +T  G++ SWG  + G++GH           I+  L  + V Q++ G++HS 
Sbjct: 93  CGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSL 152

Query: 336 AVTEDGLLYTWGEGDHGRLG---HGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
           A+T  G LY+WG   +G+LG     DL   + P  +T +  +    ++CG +H+ ++S+ 
Sbjct: 153 ALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKS 212

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
              V+  G    G+LG  D      P  ++++R   VR V  G  +SV LT +G VF  G
Sbjct: 213 S-AVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271

Query: 451 LG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQC 504
            G        +S +   P +V  L    I  V+ G+ H LAL      VY++G    GQ 
Sbjct: 272 AGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQL 331

Query: 505 GQDN 508
           G  N
Sbjct: 332 GTRN 335



 Score =  107 bits (267), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 16/264 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYTW 346
           +Y WG   HG+LG G   +++   L+   +  K    V Q++ GH H+  +T +G +Y  
Sbjct: 3   LYCWGDASHGQLGLGGIENEQ--ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYAC 60

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G  DH +LGH     R  P    +   V  ++CG  H++ L++ G  + S G  + G++G
Sbjct: 61  GNNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQ-ILSWGDNDCGQVG 119

Query: 407 HE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           H  D   +  PK++  L    V ++  G + S+ALT  G ++ WG      LG++S    
Sbjct: 120 HSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL 179

Query: 460 FHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            H+  P+ +T +    +  ++ G +H   +S+ + V+ WG NT GQ G ++  N    PS
Sbjct: 180 PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA-YPS 238

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
           ++  +  + VR +  G  +S+  T
Sbjct: 239 QLKSMRTLGVRFVTCGDEYSVFLT 262



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 21/246 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--------HIEAGQFCTFLLDSTGGL 240
           ++ +WG N   Q+     G  +   +  LP  +R         I  G   +  L S G L
Sbjct: 106 QILSWGDNDCGQV-----GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGEL 160

Query: 241 LVYGKGWLG-LANTTIQPLP-KRVPLEAAIV---SLSVSKCSEAHVLTVTSEGEVYSWGV 295
             +G    G L   + + LP    PL    +    L+   C   H   ++    V+ WG 
Sbjct: 161 YSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGK 220

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              G+LG  +  ++  P   +  +    V  V+ G  +S  +T +G ++T G G++G+LG
Sbjct: 221 NTCGQLGLNDEQNRAYPSQ-LKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLG 279

Query: 356 HGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           HG   +   P +V EL  S +  V+CG  HTL L   G  V+S G G  G+LG  +T   
Sbjct: 280 HGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQ 339

Query: 414 TTPKVI 419
           T PKV+
Sbjct: 340 TLPKVV 345



 Score = 60.5 bits (145), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 7/136 (5%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
           S V+ WG N   Q+ L++ + +    +L+S+ +  +R +  G   +  L + GG+   G 
Sbjct: 213 SAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGA 272

Query: 246 G---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKL 301
           G    LG   +  + +P+ V +E    +++   C   H L  V S G VYS+G+G  G+L
Sbjct: 273 GNYGQLGHGASNNEMIPRMV-IELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQL 331

Query: 302 GHGNTLSQRRPKLIMG 317
           G  NT+SQ  PK+++G
Sbjct: 332 GTRNTISQTLPKVVIG 347


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 20/247 (8%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           V++      E H L + ++G+V+S G   +G+LG G           +      R+ Q+S
Sbjct: 47  VTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQIS 106

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           AG SHS AV++DG L+ WG   HG+L   GD+    TP  V  L +   V+CG SHT+ L
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSL 166

Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           +         G G +   G +  G++  +P  +E      + ++ AG  F++ALT  G +
Sbjct: 167 N---------GGGRVFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTL 217

Query: 447 FWWGLGLRSSSISFH-----TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           F WG        +F       P  V  ++S  +V V  GDSH +AL+    V++ GS++ 
Sbjct: 218 FAWGRNEEGQLGNFTNRDVINPREVPNINS--VVVVECGDSHSIALTHEGRVFSCGSDSF 275

Query: 502 GQ--CGQ 506
           GQ  CGQ
Sbjct: 276 GQLGCGQ 282



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 289 EVYSWGVGEHGKLGH-----GNTLSQR-RPKLIMG---GLYGKRVTQVSAGHSHSAAVTE 339
           ++Y +G    G+L       GN       P L+ G   G +G  V  V++G  H+  +  
Sbjct: 5   QLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAN 64

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRH---TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           DG +++ G   +G LG G +K       P  ++    +  +S G SH++ +S DG  +++
Sbjct: 65  DGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGR-LFA 123

Query: 397 MGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS 455
            GS + G+L    D     TPK + +L +    +V  G S +V+L   G VF W  G +S
Sbjct: 124 WGSNSHGQLAMSGDILISDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIW--GQQS 179

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVD 514
                H+P  V    S  I+ +S G+   +AL+    ++AWG N  GQ G  NF+N  V 
Sbjct: 180 DGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLG--NFTNRDVI 237

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYT 541
            P +V  +  V V  +  G   SIA T
Sbjct: 238 NPREVPNINSVVV--VECGDSHSIALT 262



 Score = 84.3 bits (207), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 18/234 (7%)

Query: 165 DIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR-- 222
           DI  + TPK   ++ +T + VA    +T   N   ++   + G+ S  R++  P+ +   
Sbjct: 137 DILISDTPKRVPSLPET-VQVACGASHTVSLNGGGRVF--IWGQQSDGRIRHSPAEVELF 193

Query: 223 ------HIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPL--PKRVPLEAAIVSLSV 273
                  I AG   T  L ++G L  +G+   G L N T + +  P+ VP    I S+ V
Sbjct: 194 VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVP---NINSVVV 250

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
            +C ++H + +T EG V+S G    G+LG G     +     +  + G  VT+++ G  H
Sbjct: 251 VECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCH 310

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVL 387
           +  V  +G ++T+G   +G+LGHG+ +++ TP ++  + +V +V  G   +  L
Sbjct: 311 TIVVA-NGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASVFAGWDQSFCL 363



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 22/259 (8%)

Query: 189 KVYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           +++ WG N H Q+    ++    +  R+ SLP  ++ +  G   T  L+  G + ++G+ 
Sbjct: 120 RLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQ-VACGASHTVSLNGGGRVFIWGQQ 178

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTV--TSEGEVYSWGVGEHGKLGHG 304
               ++  I+  P  V L    VS+ + + S  ++ T+  T+ G +++WG  E G+LG+ 
Sbjct: 179 ----SDGRIRHSPAEVEL---FVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRH 363
                  P+ +        V  V  G SHS A+T +G +++ G    G+LG G   +S++
Sbjct: 232 TNRDVINPREVPNI---NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQN 288

Query: 364 TPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
               +TE+  S V  ++CG  HT+V++      + + S   G+LGH +T    TP++I++
Sbjct: 289 CMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGLNSN--GQLGHGNTRNQITPRMIDS 346

Query: 422 LRKFRVRKVCAGTSFSVAL 440
           +    V  V AG   S  L
Sbjct: 347 VEN--VASVFAGWDQSFCL 363



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 16/190 (8%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKC 276
           I  I AG+  +  +   G L  +G    G L ++ +  I   PKRVP     V ++   C
Sbjct: 102 IIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVA---C 158

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
             +H +++   G V+ WG    G++ H    S    +L +       + Q+SAG+  + A
Sbjct: 159 GASHTVSLNGGGRVFIWGQQSDGRIRH----SPAEVELFVS----VPIIQISAGNLFTMA 210

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +T  G L+ WG  + G+LG+   +    P  V  ++ V  V CG+SH++ L+ +G  V+S
Sbjct: 211 LTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNINSVVVVECGDSHSIALTHEGR-VFS 269

Query: 397 MGSGNLGKLG 406
            GS + G+LG
Sbjct: 270 CGSDSFGQLG 279


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +  L+D+    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ V  L +  +V +S GD+H   L+Q  +V+ +G N  GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 42/329 (12%)

Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R   Q   LP  I+ +E         G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   VGA        +SCG++HT VL+QDG  V++ G    G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H   L     
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFD 333

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S+   VDV +   H+ A +  N V
Sbjct: 334 ISCLISAEDFVDVQV--KHIFAGTYANFV 360



 Score = 91.3 bits (225), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           + WG            L +RR      G  G  + Q ++G  HS  +  +  + + G+  
Sbjct: 3   FCWG-------ADSRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +    P  +  L    V  VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++ TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      + PV  ++P  V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVVYISCG 244



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +  L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 37/236 (15%)

Query: 171 TPKLTYNIGDTDI---SVAH---------SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQS 216
           TPK    + D  I   S  H         S+V++WG N H Q  +  E   + S  R++S
Sbjct: 118 TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS 177

Query: 217 LPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE-AAIVSL 271
           L    +  + AG   +F L   G    +G    G L L+   + P+    PL   A+ +L
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV-PVQSNKPLSVGALKNL 236

Query: 272 SVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQV 327
            V    C +AH   +T +G+V+++G    G+LG+  T  +R P+L+  + GL    V+Q+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL----VSQI 292

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGE 381
             G  H+ A       Y    G     GHG  D      P  +TE  D+  +   E
Sbjct: 293 DCGSYHTLA-------YVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAE 341


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  116 bits (290), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 10/257 (3%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H   V   GEV  WG  ++G+ G G       P  + G L+G     VS G +H+ 
Sbjct: 36  CGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFV-GSLFGVACMSVSCGGAHTV 94

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT 393
            V+EDG +++WG G +G+LGHG   +  TP++V  +   DV AV+CG  HT+++   G  
Sbjct: 95  VVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGE- 153

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           +++ G    G+ G   T  + +P+ +E+LR   V+    G   +  +T  G VF +G G 
Sbjct: 154 LYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGS 213

Query: 454 -----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                         P  V  L    +  V+ G+ + +  +  + V+ +G N +GQ G  +
Sbjct: 214 CGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASS 273

Query: 509 FSNP-VDQPSKVVGLED 524
            S+P + +P ++  L++
Sbjct: 274 TSHPYLSEPRQMEFLKE 290



 Score =  109 bits (272), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 15/257 (5%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           VY WG         G  +S   P+++   + G++V  V+ G  HSA V   G +  WGE 
Sbjct: 1   VYFWG---QAGSAVGEQVSSSTPRMLKKAM-GRQVRDVACGLVHSAMVMGSGEVLCWGEN 56

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
            +G+ G G  +    PT V  L  V   +VSCG +HT+V+S+DG  V+S G G  G+LGH
Sbjct: 57  KYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGR-VFSWGLGANGQLGH 115

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
                +TTP V++A+R   V  V  G   +V +   G ++  G       G+ S+S    
Sbjct: 116 GSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTS-DLL 174

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           +P  V  L    +   S G  H   ++   EV+ +GS + GQ G  +  + +  P +V  
Sbjct: 175 SPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQD-LSMPRRVGA 233

Query: 522 LEDVCVRQICAGSLFSI 538
           L  + +  +  G  +++
Sbjct: 234 LVGIVMSMVACGEEYTV 250



 Score = 52.8 bits (125), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 15/214 (7%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG-- 244
           +V++WG   + Q+    R   + P + Q++   ++  +  G   T ++ + G L   G  
Sbjct: 101 RVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWN 160

Query: 245 -KGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
             G  G+ +T+    P+ V  L      +  + C   H   VT  GEV+++G G  G+LG
Sbjct: 161 KNGQCGVGSTSDLLSPQCVESLRGE--GVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLG 218

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-----HG 357
           HG+      P+ + G L G  ++ V+ G  ++     D  ++ +G  + G+LG     H 
Sbjct: 219 HGDCQDLSMPRRV-GALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHP 277

Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDG 391
            L        + E  +V    C +S  + L++ G
Sbjct: 278 YLSEPRQMEFLKE-EEVELCKCNQSEVIALTRRG 310


>gi|357508731|ref|XP_003624654.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
 gi|124359292|gb|ABD28429.2| Regulator of chromosome condensation/beta-lactamase-inhibitor
           protein II [Medicago truncatula]
 gi|355499669|gb|AES80872.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
          Length = 1099

 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 137/279 (49%), Gaps = 25/279 (8%)

Query: 240 LLVYGKG---WLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           L  +G G    LG  N  IQ LP +V  L  +I+ L     ++ H + +T  GEVY+WG 
Sbjct: 170 LFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKLI--SAAKFHSVALTDRGEVYTWGF 227

Query: 296 GEHGKLGH------GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           G  G+LGH          +   P+ ++ GL  +RV  ++A   H+   T+ G ++TWG  
Sbjct: 228 GRGGRLGHPDFDIHSGQAAVITPRQVISGLGSRRVMAIAAAKHHTVVATQGGEVFTWGSN 287

Query: 350 DHGRLGHGDLKSRHTPTLVTEL-SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
             G+LG+  + ++ TP  V+ L S + AV+    HT V+S  G  V++ G    G+LG+ 
Sbjct: 288 REGQLGYTSVDTQPTPRRVSTLRSRIVAVAAANKHTAVISDLGE-VFTWGCNREGQLGYG 346

Query: 409 DTGKVT--TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---------RSSS 457
            +   +  TP V+E+L+   + +V A    ++ L  DG VF WG  L         R+  
Sbjct: 347 TSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVITRNLK 406

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAW 496
            S   P+         +V ++ G +H +AL++   ++ W
Sbjct: 407 KSGSIPLKFHRKERLHVVSIAAGMAHSMALTEDGALFYW 445



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 111/227 (48%), Gaps = 23/227 (10%)

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           E++SWG G + +LG GN   Q+ P   +  L G  +  +SA   HS A+T+ G +YTWG 
Sbjct: 169 ELFSWGSGANYQLGTGNAHIQKLP-CKVDSLNGSIIKLISAAKFHSVALTDRGEVYTWGF 227

Query: 349 GDHGRLGHGDLKSRH------TPTLVTELSDVG-----AVSCGESHTLVLSQDGHTVWSM 397
           G  GRLGH D           TP  V  +S +G     A++  + HT+V +Q G  V++ 
Sbjct: 228 GRGGRLGHPDFDIHSGQAAVITPRQV--ISGLGSRRVMAIAAAKHHTVVATQGGE-VFTW 284

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           GS   G+LG+       TP+ +  LR  R+  V A    +  ++  G VF WG      L
Sbjct: 285 GSNREGQLGYTSVDTQPTPRRVSTLRS-RIVAVAAANKHTAVISDLGEVFTWGCNREGQL 343

Query: 452 GL-RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           G   S+S S +TP +V  L    +  VS    H + L    EV+ WG
Sbjct: 344 GYGTSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWG 390



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 18/178 (10%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           L++WG G + +LG G+   +  P  V  L  S +  +S  + H++ L+  G  V++ G G
Sbjct: 170 LFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKLISAAKFHSVALTDRGE-VYTWGFG 228

Query: 401 NLGKLGHED------TGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
             G+LGH D         V TP+ VI  L   RV  + A    +V  T  G VF WG   
Sbjct: 229 RGGRLGHPDFDIHSGQAAVITPRQVISGLGSRRVMAIAAAKHHTVVATQGGEVFTWGSNR 288

Query: 451 ---LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              LG  S      TP  V+ L S +IV V+  + H   +S   EV+ WG N  GQ G
Sbjct: 289 EGQLGYTSVDTQ-PTPRRVSTLRS-RIVAVAAANKHTAVISDLGEVFTWGCNREGQLG 344



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 73/232 (31%)

Query: 189 KVYTWG----CNLHHQILDEVRGKCS----RPRLQSLPSN-IRHIEAGQFCTFLLDSTGG 239
           +VYTWG      L H   D   G+ +    R  +  L S  +  I A +  T +    G 
Sbjct: 221 EVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVISGLGSRRVMAIAAAKHHTVVATQGGE 280

Query: 240 LLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           +  +G   +G LG  +   QP P+RV  L + IV+++    +  H   ++  GEV++WG 
Sbjct: 281 VFTWGSNREGQLGYTSVDTQPTPRRVSTLRSRIVAVA---AANKHTAVISDLGEVFTWGC 337

Query: 296 GEHGKLGHG--NTLSQRRP--------------------KLIMGG-----LYGKR----- 323
              G+LG+G  N+ S   P                     +++G       +G R     
Sbjct: 338 NREGQLGYGTSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPK 397

Query: 324 -------------------------VTQVSAGHSHSAAVTEDGLLYTWGEGD 350
                                    V  ++AG +HS A+TEDG L+ W   D
Sbjct: 398 RVVITRNLKKSGSIPLKFHRKERLHVVSIAAGMAHSMALTEDGALFYWISSD 449



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 49/258 (18%)

Query: 164 TDIDSTSTPKLTYNIGDTDISVAHS-----------KVYTWGCNLHHQILDEVRGKCSR- 211
           T +D+  TP+    +    ++VA +           +V+TWGCN   Q+        S  
Sbjct: 295 TSVDTQPTPRRVSTLRSRIVAVAAANKHTAVISDLGEVFTWGCNREGQLGYGTSNSASNY 354

Query: 212 -PRL-QSLPSNI-RHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPL---- 264
            P + +SL   I   + A ++ T +L S G +  +G   +          PKRV +    
Sbjct: 355 TPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLV---------TPKRVVITRNL 405

Query: 265 -EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY--- 320
            ++  + L   +    HV+++ + G  +S  + E G L +        P L    LY   
Sbjct: 406 KKSGSIPLKFHRKERLHVVSIAA-GMAHSMALTEDGALFY---WISSDPDLRCQQLYAMC 461

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG---AV 377
           G+ +  +SAG   +AAVT  G +Y W +G  G         +  P + T +  V    +V
Sbjct: 462 GRNMVNISAGKYWTAAVTATGDVYMW-DGKKG---------KDKPFVATRMHGVKKATSV 511

Query: 378 SCGESHTLVLSQDGHTVW 395
           S GE+H L+++   H V+
Sbjct: 512 SVGETHLLIVASLYHPVY 529


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 169/363 (46%), Gaps = 26/363 (7%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
             V+ WG N   Q+ D  R   + P   +  S +  + AG   +  + S G +  +G   
Sbjct: 167 GSVWAWGRNTSGQLGDGTRDDRAVPVQVTGLSGVVSVAAGGNHSLAVRSDGSVWAWGNNA 226

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG A     P+P RV   + +V+++     + H L V  +G V++WG   +G+LG G
Sbjct: 227 SGQLGGAPEAAYPVPWRVEDVSGVVAVA---AGQYHSLAVRYDGTVWAWGDNLYGQLGDG 283

Query: 305 NTLSQRR--PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                 R  PK + G L G  V  VSAG  HS  V  DG ++ WG   +G+LG G     
Sbjct: 284 KLEGNSRWLPKQVPG-LGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHA 340

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            +P  V  +S   AV+ G  H+LV++ DG T+W+ GS   G+ G     +  TP  +  L
Sbjct: 341 ASPVQVLGVSGAVAVAAGYRHSLVVNSDG-TLWAWGSNLDGQRGDGTLTRYPTPGRVPGL 399

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               V  V AG    +AL  DG V+ WG      LG   +  S   P  V  LS   +V 
Sbjct: 400 SG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLG-DGTRHSRWVPRQVPELSG--VVA 454

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           V+ G S  LA+     V++WG N  GQ G  + ++    P  V  L +V    + AGS+ 
Sbjct: 455 VAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGS-TDASSVPLHVRELSEVVA--VAAGSMH 511

Query: 537 SIA 539
           ++A
Sbjct: 512 ALA 514



 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 174/365 (47%), Gaps = 33/365 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLP-SNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N + Q+    R   + P +Q L  S    + AG   + +++S G L  +G    
Sbjct: 321 VWAWGNNAYGQLGGGSRAHAASP-VQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLD 379

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G  G    T  P P RVP  + +VS++       HVL + S+G V++WG    G+LG G 
Sbjct: 380 GQRGDGTLTRYPTPGRVPGLSGVVSVA---AGGGHVLALLSDGTVWAWGDNASGQLGDGT 436

Query: 306 TLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
             S+  P+ +  + G     V  V+AG S S AV  DG +++WG+  +G+LGHG   +  
Sbjct: 437 RHSRWVPRQVPELSG-----VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASS 491

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIE 420
            P  V ELS+V AV+ G  H L +  DG TVW  G  + G+LG    G   +  +P  + 
Sbjct: 492 VPLHVRELSEVVAVAAGSMHALAVRADG-TVWGWGFNDYGQLGDGFEGISARRYSPVQVP 550

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L       V A    S+A+  DG V+ WG      LG  +++     P+ V   +   +
Sbjct: 551 GLSGM--VSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRL-VPLRVN--APGTV 605

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             +S G ++ +A+     ++AWG+N  GQ G D  +     P +V G   V    + AG 
Sbjct: 606 ALLSAGYNYSMAMRADGSLWAWGTNFAGQLG-DGSTTSRAVPVRVQG--PVRASTLAAGQ 662

Query: 535 LFSIA 539
             S+A
Sbjct: 663 SHSMA 667



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L V  +G V++ G   HG+LG G TLS+R P  +  GL G  V  V+AGH HS A+  
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQ-GLSG--VAAVAAGHGHSLALRY 115

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG ++ WG   +G+LG     +R  P  VT LS V +V  G++H+L +  DG +VW+ G 
Sbjct: 116 DGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDG-SVWAWGR 174

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
              G+LG         P  +  L    V  V AG + S+A+  DG V+ WG      LG 
Sbjct: 175 NTSGQLGDGTRDDRAVPVQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLG- 231

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF-SNP 512
            +   ++  P  V  +S   +V V+ G  H LA+     V+AWG N  GQ G      N 
Sbjct: 232 GAPEAAYPVPWRVEDVSG--VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNS 289

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFSI 538
              P +V GL  V    + AG   S+
Sbjct: 290 RWLPKQVPGLGGVVA--VSAGFYHSL 313



 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 153/326 (46%), Gaps = 20/326 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N   Q+ D  R     PR     S +  + AG   +  +   G +  +G    G
Sbjct: 421 VWAWGDNASGQLGDGTRHSRWVPRQVPELSGVVAVAAGSSFSLAVRYDGSVWSWGDNAYG 480

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-N 305
            LG  +T    +P  V   + +V+++       H L V ++G V+ WG  ++G+LG G  
Sbjct: 481 QLGHGSTDASSVPLHVRELSEVVAVAAGSM---HALAVRADGTVWGWGFNDYGQLGDGFE 537

Query: 306 TLSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
            +S RR   + + GL G  +  V+A   HS AV  DG ++ WG      LG G    R  
Sbjct: 538 GISARRYSPVQVPGLSG--MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLV 595

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           P  V     V  +S G ++++ +  DG ++W+ G+   G+LG   T     P  ++    
Sbjct: 596 PLRVNAPGTVALLSAGYNYSMAMRADG-SLWAWGTNFAGQLGDGSTTSRAVPVRVQG--P 652

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDVSI 479
            R   + AG S S+A+  DG ++ WG      L   +++ H  PV V G+S    VDV++
Sbjct: 653 VRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVTL 712

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCG 505
             S  LA+     ++AWG+N +GQ G
Sbjct: 713 NLS--LAVRSDGSLWAWGNNDVGQLG 736



 Score =  100 bits (249), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 111/217 (51%), Gaps = 23/217 (10%)

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           HS AV  DG ++T G   HG+LG G   SR TP  V  LS V AV+ G  H+L L  DG 
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAAVAAGHGHSLALRYDG- 117

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
           TVW+ G+   G+LG +     T P  +  L    V  V AG + S+A+  DG V+ WG  
Sbjct: 118 TVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWG-- 173

Query: 453 LRSSSISFH--------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ- 503
            R++S             PV VTGLS   +V V+ G +H LA+     V+AWG+N  GQ 
Sbjct: 174 -RNTSGQLGDGTRDDRAVPVQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQL 230

Query: 504 CGQDNFSNPVDQPSKVVGLEDVC-VRQICAGSLFSIA 539
            G    + PV  P +V   EDV  V  + AG   S+A
Sbjct: 231 GGAPEAAYPV--PWRV---EDVSGVVAVAAGQYHSLA 262



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 21/240 (8%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSR-------PRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           A   V+ WG N + Q+ D   G  +R       P L  + S    + A    +  + + G
Sbjct: 517 ADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSGMVS----VAADFGHSLAVRADG 572

Query: 239 GLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
            +  +G      LG   TT + +P RV     +  LS       + + + ++G +++WG 
Sbjct: 573 TVWAWGNNTDSELGDGTTTRRLVPLRVNAPGTVALLSAGYN---YSMAMRADGSLWAWGT 629

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              G+LG G+T S+  P  + G +   R + ++AG SHS AV  DG L+ WG    G+LG
Sbjct: 630 NFAGQLGDGSTTSRAVPVRVQGPV---RASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLG 686

Query: 356 HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
            G L     P  V  +S V AV    + +L +  DG ++W+ G+ ++G+LG + +  VTT
Sbjct: 687 DGTLTHHALPVRVPGMSGVVAVDVTLNLSLAVRSDG-SLWAWGNNDVGQLGTQPSTYVTT 745


>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
           (POZ) domain containing protein 1 [Oryctolagus
           cuniculus]
          Length = 531

 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 136/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++VL+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMVLAADGE-VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYAWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKT 302



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEVY+WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  +  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHV-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (251), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 14/261 (5%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS  +  DG +Y WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V++ G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYAWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V ++  G + ++ALT +GL++ WG      LG  + + +  +P  V  +   ++V+++
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKN-NLLSPAHVM-VEKERVVEIA 290

Query: 479 IGDS-HV-LALSQYNEVYAWG 497
              S H   A +Q   VY WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score = 75.1 bits (183), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTGGLL 241
            A  +VY WG N   Q+          PR  +   +I+    I  GQ  +  +   G + 
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 242 VYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
            +G    G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 AWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  +M  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHVM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|218295499|ref|ZP_03496312.1| regulator of chromosome condensation RCC1 [Thermus aquaticus
           Y51MC23]
 gi|218244131|gb|EED10657.1| regulator of chromosome condensation RCC1 [Thermus aquaticus
           Y51MC23]
          Length = 534

 Score =  116 bits (290), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 105/313 (33%), Positives = 146/313 (46%), Gaps = 37/313 (11%)

Query: 251 ANTTIQPLPKRVPLEAAIVS----LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
           A T     P+  P E    S    LSVS     HVL V  +G V++WG+ + G+LG G T
Sbjct: 144 APTQAAQAPRPAPSEDLWTSWDRRLSVSL---HHVLYVGKDGTVWAWGLNQDGQLGIGKT 200

Query: 307 LSQRRPKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            S+  PK + + GL    V +V+AG  HS A+  DG ++ WG  DHG+L  G   +   P
Sbjct: 201 -SEAEPKPVKVQGL--TDVVEVAAGWRHSLALRRDGTVWAWGNNDHGQL--GITPNPLVP 255

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
             V  L+DV A+  G   +  L +DG T+W+ GSG  G LG  D      P  ++ L   
Sbjct: 256 YPVRGLTDVVAIRAGRDTSYALRRDG-TLWAWGSGRWGILGVGDFADRPLPTQVQGLSGI 314

Query: 426 R-VRKVCAGTSFSVALTWDGLVFWW--------GLGLRSS--------SISFHTPVLVTG 468
           + + +   G   +  L  DG V+ W        G G R S             TPV V G
Sbjct: 315 KALPQGIFGDGVAAVLKEDGTVWVWGNNTHGLLGTGQRCSYWESGWDWGQGQPTPVQVEG 374

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L    +  +++G  H +AL +  EV AWG +  GQ G   F+      +KV  L DV   
Sbjct: 375 LKD--VAQLAVGGHHFVALLKTGEVVAWGLSHRGQAGV--FNEYCAAITKVPDLRDVV-- 428

Query: 529 QICAGSLFSIAYT 541
           +I AG + S A T
Sbjct: 429 RIQAGGIISSALT 441



 Score = 81.6 bits (200), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 87/346 (25%), Positives = 138/346 (39%), Gaps = 44/346 (12%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ + +      +P ++Q L +++  + AG   +  L   G +  +G   
Sbjct: 184 VWAWGLNQDGQLGIGKTSEAEPKPVKVQGL-TDVVEVAAGWRHSLALRRDGTVWAWGNND 242

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G LG+    + P P R      +  +   +        +  +G +++WG G  G LG G
Sbjct: 243 HGQLGITPNPLVPYPVR-----GLTDVVAIRAGRDTSYALRRDGTLWAWGSGRWGILGVG 297

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL----- 359
           +   +  P  + G    K + Q   G   +A + EDG ++ WG   HG LG G       
Sbjct: 298 DFADRPLPTQVQGLSGIKALPQGIFGDGVAAVLKEDGTVWVWGNNTHGLLGTGQRCSYWE 357

Query: 360 ------KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV-WSMGSGNLGKLGHEDTGK 412
                 + + TP  V  L DV  ++ G  H + L + G  V W +       + +E    
Sbjct: 358 SGWDWGQGQPTPVQVEGLKDVAQLAVGGHHFVALLKTGEVVAWGLSHRGQAGVFNEYCAA 417

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALT-------------WDGLVFWWGLGLRSSSIS 459
           +T    +  LR   V ++ AG   S ALT             WDG VF+  LG+      
Sbjct: 418 ITK---VPDLRD--VVRIQAGGIISSALTRDGTLWAWGTHTSWDGRVFFGMLGIGPVRRD 472

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           +  PV   G+     V    G     A+     V+AWG N  GQ G
Sbjct: 473 WERPVPPIGMDG---VIFWEGWDTTFAVKGDGTVWAWGRNDYGQIG 515


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ V  L +  +V +S GD+H   L+Q  +V+ +G N  GQ G
Sbjct: 210 SGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 42/329 (12%)

Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R   Q   LP  I+ +E         G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   VGA        +SCG++HT VL+QDG  V++ G    G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H+  L     
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFD 333

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S+  +VDV +   H+ A +  N V
Sbjct: 334 ISCLISAEDLVDVHV--KHIFAGTYANFV 360



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           + WG            L +RR      G  G  + Q ++G  HS  +  +  + + G+  
Sbjct: 3   FCWGTD-------SRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +    P  +  L    V  VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++ TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      + PV  ++P  V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVVYISCG 244



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 9/170 (5%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   S+A
Sbjct: 31  GERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLA 89

Query: 440 LTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           +   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+ ++
Sbjct: 90  VCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 ---KGWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C +AH   +T +G+V+++G    
Sbjct: 207 SNSSGQLALSGRNV-PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVVSFGHG 315


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ V  L +  +V +S GD+H   L+Q  +V+ +G N  GQ G
Sbjct: 210 SGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 42/329 (12%)

Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R   Q   LP  I+ +E         G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   VGA        +SCG++HT VL+QDG  V++ G    G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H+  L     
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFD 333

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S+  +VDV +   H+ A +  N V
Sbjct: 334 ISCLISAEDLVDVHV--KHIFAGTYANFV 360



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           + WG            L +RR      G  G  + Q ++G  HS  +  +  + + G+  
Sbjct: 3   FCWGTD-------SRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +    P  +  L    V  VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++ TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      + PV  ++P  V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVVYISCG 244



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 9/170 (5%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   S+A
Sbjct: 31  GERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLA 89

Query: 440 LTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           +   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+ ++
Sbjct: 90  VCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 ---KGWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C +AH   +T +G+V+++G    
Sbjct: 207 SNSSGQLALSGRNV-PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVVSFGHG 315


>gi|442319025|ref|YP_007359046.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486667|gb|AGC43362.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 746

 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 157/320 (49%), Gaps = 24/320 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQF-CTFLLDSTGGLLVYGK--- 245
           V++WG N   ++ D      S P      +++  +EAG+   +    + G L V+G    
Sbjct: 67  VWSWGTNYGGELGDGTHNHRSTPAQVPNLTSVTAVEAGRGNYSMARRADGSLWVWGYNTY 126

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG   TT +  P  VP  + + S+S       H + + S+G V++WG    G+LG G+
Sbjct: 127 GQLGDGTTTSRWSPIPVPGFSGVSSVS---GGYMHSMALKSDGTVWAWGRNADGQLGDGS 183

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T  +  P   +G L    VT VSAG+  SAA+  DG ++TWG+   G LG+G L  R TP
Sbjct: 184 TTQRLSPVRALG-L--SLVTSVSAGYDFSAALKADGTVWTWGDNTDGELGNGTLTDRLTP 240

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TPKVIEALR 423
             V  L+ V  +  G SH + +  DG TVW  G  + G LG  +   +   TP  +  + 
Sbjct: 241 AQVPGLTGVVFLMAGHSHVMAVKSDG-TVWVWGRNDWGVLGLGEGAPIRQLTPTQVPGIS 299

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDV 477
           +  V  V +G  ++VAL  DG ++ WG      LG  +  + +  P  + GL+  Q+  +
Sbjct: 300 Q--VAFVDSGEHYTVALKTDGTLWGWGYNNYGQLGEGTGGVKY-LPTQLPGLT--QVATL 354

Query: 478 SIGDSHVLALSQYNEVYAWG 497
            +G  H +A+ Q    +AWG
Sbjct: 355 GVGRYHAMAIKQDGTAWAWG 374



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 132/275 (48%), Gaps = 29/275 (10%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGN----TLSQRRPKLIMGGLYGKRVTQVSAGHS- 332
           ++H L +  +G V+SWG    G+LG G     +   + P L         VT V AG   
Sbjct: 55  QSHTLWLKPDGTVWSWGTNYGGELGDGTHNHRSTPAQVPNLT-------SVTAVEAGRGN 107

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH 392
           +S A   DG L+ WG   +G+LG G   SR +P  V   S V +VS G  H++ L  DG 
Sbjct: 108 YSMARRADGSLWVWGYNTYGQLGDGTTTSRWSPIPVPGFSGVSSVSGGYMHSMALKSDG- 166

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TVW+ G    G+LG   T +  +P  + AL    V  V AG  FS AL  DG V+ WG  
Sbjct: 167 TVWAWGRNADGQLGDGSTTQRLSP--VRALGLSLVTSVSAGYDFSAALKADGTVWTWGDN 224

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG   +     TP  V GL+   +V +  G SHV+A+     V+ WG N  G  G 
Sbjct: 225 TDGELG-NGTLTDRLTPAQVPGLTG--VVFLMAGHSHVMAVKSDGTVWVWGRNDWGVLGL 281

Query: 507 DNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIA 539
              + P+ Q  P++V G+  V    + +G  +++A
Sbjct: 282 GEGA-PIRQLTPTQVPGISQVAF--VDSGEHYTVA 313



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 161/362 (44%), Gaps = 26/362 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
            + WG +  +Q  +  R   +          +R +  G + T +L + G   V+G G  G
Sbjct: 370 AWAWGLHDAYQYANVTRPDSAVAVATQFTGALRPV-GGLYETLVLKADG--TVWGAGRNG 426

Query: 250 LANTTIQPLPKRV-PLEAAIVSLSVSKCSEA-HVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
                     +RV P +A  ++ +VS  S A H L   S+G V++WG    G+LG G+T 
Sbjct: 427 SGQLGDGSGTQRVVPAQAVGLTGAVSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTT 486

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
           +   P  +  GL G  V  V+AG   S A+  DG L+ WG    G LG G    R TP L
Sbjct: 487 ASLIPIQVP-GLTG--VAAVAAGDGFSLALKSDGTLWAWGRNSSGSLGDGTTTGRTTPAL 543

Query: 368 VTELSDVGAVSC--GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
           V   + V AV+   G  H L L  +G T+W+ G  + G+LG     +  +P  +      
Sbjct: 544 VPNFTGVKAVATAPGADHVLALKTNG-TLWAWGGNSYGQLGDGSVLRKLSPVFVNLT--- 599

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
            V  +  G+  S+ +   G V+ WG      LG   +  +   PV V G++      ++ 
Sbjct: 600 GVLSIATGSDHSLVVRTGGAVWTWGRNDAAQLG-DGTGTTRTLPVQVQGVTG--ATALAA 656

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           GD H L L     ++AWGSN+ G+ G    +    +P  V       V  + AG+  S+A
Sbjct: 657 GDRHSLMLRSDGTLWAWGSNSEGELGDGTMTG---RPLPVRVRAPAGVVALSAGARHSLA 713

Query: 540 YT 541
            T
Sbjct: 714 MT 715



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 149/385 (38%), Gaps = 80/385 (20%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   V+TWG N   ++ +        P      + +  + AG      + S G + V+G+
Sbjct: 214 ADGTVWTWGDNTDGELGNGTLTDRLTPAQVPGLTGVVFLMAGHSHVMAVKSDGTVWVWGR 273

Query: 246 ---GWLGLANTTI--QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              G LGL       Q  P +VP    I  ++     E + + + ++G ++ WG   +G+
Sbjct: 274 NDWGVLGLGEGAPIRQLTPTQVP---GISQVAFVDSGEHYTVALKTDGTLWGWGYNNYGQ 330

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSA---GHSHSAAVTEDGLLYTWGEGD------- 350
           LG G    +  P  + G      +TQV+    G  H+ A+ +DG  + WG  D       
Sbjct: 331 LGEGTGGVKYLPTQLPG------LTQVATLGVGRYHAMAIKQDGTAWAWGLHDAYQYANV 384

Query: 351 ------------------------------------------HGRLGHGDLKSRHTPTLV 368
                                                      G+LG G    R  P   
Sbjct: 385 TRPDSAVAVATQFTGALRPVGGLYETLVLKADGTVWGAGRNGSGQLGDGSGTQRVVPAQA 444

Query: 369 TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVR 428
             L+   +V+ G +H L    DG TVW+ G    G+LG   T     P  +  L    V 
Sbjct: 445 VGLTGAVSVASGANHALAAKSDG-TVWAWGGNGSGQLGDGSTTASLIPIQVPGLTG--VA 501

Query: 429 KVCAGTSFSVALTWDGLVFWWGLGLRSSSISF--------HTPVLVTGLSSHQIVDVSIG 480
            V AG  FS+AL  DG ++ WG   R+SS S          TP LV   +  + V  + G
Sbjct: 502 AVAAGDGFSLALKSDGTLWAWG---RNSSGSLGDGTTTGRTTPALVPNFTGVKAVATAPG 558

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCG 505
             HVLAL     ++AWG N+ GQ G
Sbjct: 559 ADHVLALKTNGTLWAWGGNSYGQLG 583



 Score = 87.8 bits (216), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 170/421 (40%), Gaps = 83/421 (19%)

Query: 120 EVLRP------ATHYQVDLIRSACLVYLILVTLADDNIKPLGDRKSSNSNTDIDSTSTPK 173
            V RP      AT +    +R    +Y  LV  AD  +   G R  S    D   T    
Sbjct: 383 NVTRPDSAVAVATQF-TGALRPVGGLYETLVLKADGTVWGAG-RNGSGQLGDGSGTQRVV 440

Query: 174 LTYNIGDTD-ISVAHSK-----------VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI 221
               +G T  +SVA              V+ WG N   Q+ D        P      + +
Sbjct: 441 PAQAVGLTGAVSVASGANHALAAKSDGTVWAWGGNGSGQLGDGSTTASLIPIQVPGLTGV 500

Query: 222 RHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
             + AG   +  L S G L  +G+   G LG   TT +  P  VP    + +++ +  ++
Sbjct: 501 AAVAAGDGFSLALKSDGTLWAWGRNSSGSLGDGTTTGRTTPALVPNFTGVKAVATAPGAD 560

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            HVL + + G +++WG   +G+LG G+ L +  P  +   L G  V  ++ G  HS  V 
Sbjct: 561 -HVLALKTNGTLWAWGGNSYGQLGDGSVLRKLSPVFVN--LTG--VLSIATGSDHSLVVR 615

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
             G ++TWG  D  +LG G   +R  P  V  ++   A++ G+ H+L+L  DG T+W+ G
Sbjct: 616 TGGAVWTWGRNDAAQLGDGTGTTRTLPVQVQGVTGATALAAGDRHSLMLRSDG-TLWAWG 674

Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVR-KVCAGTSFSVALTWDGLVFWWGLGLRSSS 457
           S + G+LG    G +T        R   VR +  AG                        
Sbjct: 675 SNSEGELGD---GTMTG-------RPLPVRVRAPAG------------------------ 700

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF---SNPVD 514
                           +V +S G  H LA++    V+AWG N  GQ G + +   + PV 
Sbjct: 701 ----------------VVALSAGARHSLAMTPDGTVWAWGLNLFGQHGNNKWGFKTTPVQ 744

Query: 515 Q 515
           Q
Sbjct: 745 Q 745


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 24/289 (8%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
            P +A   ++    C E H + +T + +++S G    G+LG G           +    G
Sbjct: 3   APNDADGTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSG 62

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVGAVSCG 380
             + Q++AG +HS AV +DG ++ WG  +HG+LG    +  +  P  + +L++V  V+ G
Sbjct: 63  VGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEVVQVASG 122

Query: 381 ESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSV 438
             H + L++DG   VW          G +  G+ +  P+++E L    + +V AG    V
Sbjct: 123 SDHCIALTEDGRVYVW----------GEQADGRCIHHPELVEHLNAIPIVRVEAGARHCV 172

Query: 439 ALTWDGLVFWWG------LGLRS--SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           A++  G VF WG      LG+       S H    + GL    +V+ + GD+H + L+  
Sbjct: 173 AISASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLG---VVEAACGDNHTILLTHC 229

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
              +++GS+ +GQCG          P+ V  L    V +I AG+  +IA
Sbjct: 230 GRTFSFGSDALGQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIA 278



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 124/300 (41%), Gaps = 75/300 (25%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV--AHS-------KVYTWGCNLHHQILDE 204
           LG  K S  +  I   S   LT  +G   I+   AHS       +V+ WG N H      
Sbjct: 42  LGRGKRSEGSFSIYPVS---LTSGVGIVQIAAGRAHSLAVADDGRVFAWGSNEH------ 92

Query: 205 VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANT-TIQPLPKRVP 263
                                                    G LG+ NT T Q +PKR+ 
Sbjct: 93  -----------------------------------------GQLGMENTITWQEMPKRIN 111

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               +V ++       H + +T +G VY WG    G+  H        P+L+   L    
Sbjct: 112 QLNEVVQVA---SGSDHCIALTEDGRVYVWGEQADGRCIH-------HPELVE-HLNAIP 160

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGE 381
           + +V AG  H  A++  G ++TWG+ + G LG  D + + +   VT++  +G V  +CG+
Sbjct: 161 IVRVEAGARHCVAISASGAVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGD 220

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           +HT++L+  G T +S GS  LG+ G  +   K   P  +  L    V ++ AG   ++A+
Sbjct: 221 NHTILLTHCGRT-FSFGSDALGQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAI 279



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSR-----PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +VY WG        ++  G+C         L ++P  I  +EAG      + ++G +  +
Sbjct: 134 RVYVWG--------EQADGRCIHHPELVEHLNAIP--IVRVEAGARHCVAISASGAVFTW 183

Query: 244 GK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G+   G LG+ +   Q     V  +   + +  + C + H + +T  G  +S+G    G+
Sbjct: 184 GQNNSGELGMDDFRPQTSVHHVT-QMDGLGVVEAACGDNHTILLTHCGRTFSFGSDALGQ 242

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
            G G  L +R     +  L G  VT+++AG  H+ A+   G  Y +G    G+LG+G + 
Sbjct: 243 CGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAIIR-GSPYPFGLNSSGQLGNGKIM 301

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDG 391
           ++ TP    +L  V AV  G   T  +   G
Sbjct: 302 TQSTPRKTDDLDHVTAVFAGYHQTFFIRSAG 332


>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
 gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
          Length = 392

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 156/296 (52%), Gaps = 28/296 (9%)

Query: 231 TFLLDSTGGLLVYGKGW---LGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTS 286
           TF++   G + +YG G     GL +++++      VP++     L V   + +H + +  
Sbjct: 43  TFMVKKDGSV-IYGTGSDANGGLGSSSVKGKTTSPVPVDDLSDVLMVDTGT-SHTVALQK 100

Query: 287 EGEVYSWGVGEHGKLGHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           +G V++WG   +G+LG+    S ++ P  +    +   V QV AG + + A+ EDG ++ 
Sbjct: 101 DGTVWTWGWSAYGELGNEKAKSTEKTPHHVK---WLSDVKQVRAGENFTLALKEDGTVWA 157

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           +G+   G+LG G  ++R  P  V+ L+D+ A+  GE  +L LS+DG TVW+ G+ ++G+L
Sbjct: 158 FGKNRSGQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDG-TVWAWGNNSVGQL 216

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL-------GLRSSSI 458
           G+    K   P  +  L    V  +  G     A+T +G V+ WG        G + SS 
Sbjct: 217 GNGTREKALQPVQVSELTD--VIAISTGEKQGYAVTSNGDVYGWGYNQGKLGDGTKKSS- 273

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
             ++PVL+ G+  + ++ V  G  H LAL +   V+AWG+NT GQ G   +  PV+
Sbjct: 274 --NSPVLIDGI--YDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLG---YGTPVN 322



 Score = 99.0 bits (245), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 19/312 (6%)

Query: 205 VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVP 263
           V+GK + P      S++  ++ G   T  L   G +  +G    G L N   +   K   
Sbjct: 69  VKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPH 128

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               +  +   +  E   L +  +G V+++G    G+LG G T ++ +P  + G      
Sbjct: 129 HVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLT---D 185

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           +  + AG   S A++EDG ++ WG    G+LG+G  +    P  V+EL+DV A+S GE  
Sbjct: 186 IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQPVQVSELTDVIAISTGEKQ 245

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
              ++ +G  V+  G  N GKLG        +P +I+ +  + V  V +G   ++AL  D
Sbjct: 246 GYAVTSNGD-VYGWGY-NQGKLGDGTKKSSNSPVLIDGI--YDVIAVDSGKQHTLALKED 301

Query: 444 GLVFWWGLGLRSSSISFHTPV----------LVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           G V+ WG       + + TPV          L +    +QIV +  G  H  A+ +   V
Sbjct: 302 GTVWAWGTNTHGQ-LGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTV 360

Query: 494 YAWGSNTMGQCG 505
           ++WG N+ G+ G
Sbjct: 361 WSWGFNSNGELG 372



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 117/243 (48%), Gaps = 13/243 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ +G N   Q+ D       +P   S  ++I  I+AG+  +  L   G +  +G   +G
Sbjct: 155 VWAFGKNRSGQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVG 214

Query: 250 -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            L N T +   + V +      +++S   E     VTS G+VY WG    GKLG G   S
Sbjct: 215 QLGNGTREKALQPVQVSELTDVIAIS-TGEKQGYAVTSNGDVYGWGY-NQGKLGDGTKKS 272

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTL 367
              P LI G +Y   V  V +G  H+ A+ EDG ++ WG   HG+LG+G  +    TP  
Sbjct: 273 SNSPVLIDG-IY--DVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQ 329

Query: 368 V----TE-LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           V    TE L+ + A+  G  H+  + +DG TVWS G  + G+LG   + K   P  IE +
Sbjct: 330 VFLESTEPLNQIVAIDAGGFHSHAIKKDG-TVWSWGFNSNGELGLGHSKKQMYPAKIETI 388

Query: 423 RKF 425
             F
Sbjct: 389 NLF 391



 Score = 43.9 bits (102), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 452 GLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
           GL SSS+   T  PV V  LS   +VD   G SH +AL +   V+ WG +  G+ G +  
Sbjct: 63  GLGSSSVKGKTTSPVPVDDLSDVLMVDT--GTSHTVALQKDGTVWTWGWSAYGELGNEKA 120

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
            +    P  V  L D  V+Q+ AG  F++A
Sbjct: 121 KSTEKTPHHVKWLSD--VKQVRAGENFTLA 148


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 128/253 (50%), Gaps = 16/253 (6%)

Query: 211 RPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           RPRL ++L + + + +  G   T  L   G L   G    G LG  +T  +P PK + L 
Sbjct: 206 RPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR-- 323
             I  +       ++VL VT  G VYS+G G +  LGHG    + +P+ I    + ++  
Sbjct: 266 EGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQ--TFRRKDI 323

Query: 324 -VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV-SCGE 381
            V  VSAG  H+ A+   G +Y+WG+G  G LGHGD   +  P+LV  L    AV +C  
Sbjct: 324 HVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACAR 383

Query: 382 SH-TLVLSQDGHTVWSMGSGNLGKLGHED---TGKVTTPKVIEALRKFRVRKVCAGTSFS 437
              T VL  DG +V+  G    G LG  D   T KV TP+V+++LR  RV ++  G   +
Sbjct: 384 KRKTFVLVDDG-SVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHT 442

Query: 438 VALTWDGLVFWWG 450
           V +T  G +F +G
Sbjct: 443 VVVTNQGQMFGFG 455



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 20/275 (7%)

Query: 261 RVPLEAAIVSLSVSKCSEAHVLTV--TSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--M 316
           R  L  A+ ++S  + S     TV  T +G++Y+ G   HG+LGHG+TL +  PK+I  +
Sbjct: 206 RPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELL 265

Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS---- 372
            G+    V Q++AG S+  AVT++G++Y++G G +  LGHG+      P  +        
Sbjct: 266 EGI--GPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDI 323

Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCA 432
            V  VS G+ H + L   G  V+S G G  G LGH D    T P ++  L+     + CA
Sbjct: 324 HVVHVSAGDEHAVALDSSGF-VYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACA 382

Query: 433 GTSFSVALTWDGLVFWWG------LGLRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHV 484
               +  L  DG V+ +G      LG     I+    TP ++  L +H++  +S G  H 
Sbjct: 383 RKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHT 442

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
           + ++   +++ +G N   Q G D     + QP+++
Sbjct: 443 VVVTNQGQMFGFGDNERVQLGHDTLRGCL-QPTEI 476



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 124/266 (46%), Gaps = 31/266 (11%)

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQ-------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           +  VYS G    G LGHG   +Q       R P L         V QVSA H+H+A V +
Sbjct: 128 DSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSL-------ANVVQVSASHNHAAFVLQ 180

Query: 340 DGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWS 396
            G ++T G+      GH D  +    P LV  L  V    VS G + T+ L++ G  +++
Sbjct: 181 SGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQ-LYT 239

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWG----- 450
            GS   G+LGH DT    TPK+IE L     V ++ AG S+ +A+T +G+V+ +G     
Sbjct: 240 CGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNF 299

Query: 451 -LGLRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
            LG       F    + T       +V VS GD H +AL     VY+WG    G CG   
Sbjct: 300 CLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGK---GYCGALG 356

Query: 509 FSNPVDQ--PSKVVGLEDVCVRQICA 532
             + +D+  PS V  L+     Q CA
Sbjct: 357 HGDEIDKTLPSLVNCLKSRLAVQACA 382



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 128/312 (41%), Gaps = 21/312 (6%)

Query: 246 GWLGLANTTIQPLPK---RVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
           G LG    T Q +     R P  A +V +S S     H   V   GEV++ G       G
Sbjct: 140 GVLGHGAETTQCVAFTRIRFPSLANVVQVSAS---HNHAAFVLQSGEVFTCGDNSSFCCG 196

Query: 303 HGNTLSQ-RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           H +T     RP+L+   L      QVS G + +  +T  G LYT G   HG+LGHGD   
Sbjct: 197 HKDTNRPIFRPRLVEA-LKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLD 255

Query: 362 RHTPTLVTELSDVGAV---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
           R TP ++  L  +G V   + G S+ L ++ +G  V+S G G+   LGH +      P+ 
Sbjct: 256 RPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNG-VVYSFGYGSNFCLGHGEQHDEFQPRA 314

Query: 419 IEALRK--FRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSS 471
           I+  R+    V  V AG   +VAL   G V+ WG G          I    P LV  L S
Sbjct: 315 IQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKS 374

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQ 529
              V           L     VY +G    G  G    + +  V  P  +  L    V Q
Sbjct: 375 RLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQ 434

Query: 530 ICAGSLFSIAYT 541
           I  G   ++  T
Sbjct: 435 ISTGLYHTVVVT 446



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)

Query: 175 TYNIGDTDISVAHSKVYTWGCNL---HHQILDEVRGKCSRPR-LQSLPS---NIRHIEAG 227
           +Y +  TD  V +S  + +G N    H +  DE +     PR +Q+      ++ H+ AG
Sbjct: 279 SYVLAVTDNGVVYS--FGYGSNFCLGHGEQHDEFQ-----PRAIQTFRRKDIHVVHVSAG 331

Query: 228 QFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH-VLT 283
                 LDS+G +  +GKG+   LG  +   + LP  V    +   L+V  C+       
Sbjct: 332 DEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKS--RLAVQACARKRKTFV 389

Query: 284 VTSEGEVYSWGVGEHGKLGHGN---TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           +  +G VY +G    G LG  +   T     P+ ++  L   RV+Q+S G  H+  VT  
Sbjct: 390 LVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPR-VLDSLRAHRVSQISTGLYHTVVVTNQ 448

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPT--LVTELSD 373
           G ++ +G+ +  +LGH  L+    PT   V E +D
Sbjct: 449 GQMFGFGDNERVQLGHDTLRGCLQPTEIFVQETAD 483


>gi|403346770|gb|EJY72792.1| hypothetical protein OXYTRI_06078 [Oxytricha trifallax]
          Length = 1774

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 37/265 (13%)

Query: 266  AAIVSLSVSK-----CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGL 319
            A + S+S ++     C   H + +T+ G+V SWG G  G LGHG+ ++  +PK I  G +
Sbjct: 840  ATLYSMSFTQVAWISCGYEHCMVLTNLGQVASWGFGASGCLGHGDYVAYLQPKYINQGEI 899

Query: 320  YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG----------HG--DLKSRHTPTL 367
            +GK +T + AG  H++A+  +G LY WG  D G+LG          +G   L  +     
Sbjct: 900  FGKFITYIDAGGYHNSAIDIEGNLYMWGRSDVGQLGLKVNQLQKDNYGFVSLIPQQLKYF 959

Query: 368  VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
              +   +  V+ GE+H++ L  +G  V+S G  N  +LG +        +V  A+  +R+
Sbjct: 960  ENKQRRIKQVALGEAHSIALDHEG-AVYSFGWNNHSQLGFKQEHCEQKAEVKFAI--YRI 1016

Query: 428  R--------KVCAGTSFSVALTWDGL-VFWWG------LGLRSSSISFHTPVLVTGLSSH 472
            +        K+ +G+ FSVA+T     ++ WG      LGL +   +   P LV   ++ 
Sbjct: 1017 QFFDNMPCSKIASGSIFSVAITEQRTNLYIWGSGSNGQLGLGNIKQA-DQPTLVEFPNNS 1075

Query: 473  QIVDVSIGDSHVLALSQYNEVYAWG 497
            Q++DV+ GDS+V+AL   ++VY WG
Sbjct: 1076 QVIDVNCGDSNVIALLGNSQVYGWG 1100



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 17/195 (8%)

Query: 280  HVLTVTSEGEVYSWGVGEHGKLG-HGNTLSQRR--------PKLIMGGLYGKRVTQVSAG 330
            H   +  EG +Y WG  + G+LG   N L +           +L       +R+ QV+ G
Sbjct: 913  HNSAIDIEGNLYMWGRSDVGQLGLKVNQLQKDNYGFVSLIPQQLKYFENKQRRIKQVALG 972

Query: 331  HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--------GAVSCGES 382
             +HS A+  +G +Y++G  +H +LG           +   +  +          ++ G  
Sbjct: 973  EAHSIALDHEGAVYSFGWNNHSQLGFKQEHCEQKAEVKFAIYRIQFFDNMPCSKIASGSI 1032

Query: 383  HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
             ++ +++    ++  GSG+ G+LG  +  +   P ++E     +V  V  G S  +AL  
Sbjct: 1033 FSVAITEQRTNLYIWGSGSNGQLGLGNIKQADQPTLVEFPNNSQVIDVNCGDSNVIALLG 1092

Query: 443  DGLVFWWGLGLRSSS 457
            +  V+ WG G+ +S+
Sbjct: 1093 NSQVYGWGEGITNSN 1107



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 25/199 (12%)

Query: 371  LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI---EALRKFRV 427
             + V  +SCG  H +VL+  G  V S G G  G LGH D      PK I   E   KF +
Sbjct: 847  FTQVAWISCGYEHCMVLTNLGQ-VASWGFGASGCLGHGDYVAYLQPKYINQGEIFGKF-I 904

Query: 428  RKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL---------SSH 472
              + AG   + A+  +G ++ WG      LGL+ + +       V+ +            
Sbjct: 905  TYIDAGGYHNSAIDIEGNLYMWGRSDVGQLGLKVNQLQKDNYGFVSLIPQQLKYFENKQR 964

Query: 473  QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQP---SKVVGLEDVCV 527
            +I  V++G++H +AL     VY++G N   Q G  Q++     +      ++   +++  
Sbjct: 965  RIKQVALGEAHSIALDHEGAVYSFGWNNHSQLGFKQEHCEQKAEVKFAIYRIQFFDNMPC 1024

Query: 528  RQICAGSLFSIAYTVPPSN 546
             +I +GS+FS+A T   +N
Sbjct: 1025 SKIASGSIFSVAITEQRTN 1043


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 165/353 (46%), Gaps = 62/353 (17%)

Query: 238 GGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           G L  +G    G LG+  T  Q LP ++   + +VSL+     E H L V+ +G V+SWG
Sbjct: 7   GALWTWGGNDDGRLGIGATGDQNLPVQLSYLSNVVSLAGG---EKHSLAVSGDGSVWSWG 63

Query: 295 VGEHGKLG----------------------------HGNTLSQ------RRPKLIMGGLY 320
               G+LG                             G+            P     GL 
Sbjct: 64  SNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLS 123

Query: 321 G--KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS 378
           G    V  ++AG   S  +  DG +++WG   +  LG GD   R+TP  V  LS+  A++
Sbjct: 124 GCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSNAVALA 183

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLG----HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            G+ HTL L++DG +VWS G    G+LG    HEDT   +TPK +EA+    V  + A T
Sbjct: 184 AGDDHTLALTRDG-SVWSWGWNYNGQLGLGSIHEDT-YESTPKKVEAISN--VTAIAAQT 239

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             + ALT DG V+ WG      LG+   +     P  V  LS+  +V ++ G +H LA++
Sbjct: 240 YHTQALTRDGNVWSWGSNDFGQLGMGDQN-DRDAPQKVEALSN--VVAINAGGNHSLAVT 296

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           +  +V+AWG N+ GQ G  +  +  D P KV  L +V    I AG   ++A T
Sbjct: 297 RDGQVWAWGENSEGQLGLGDLWDR-DAPQKVEALSNVVA--INAGGDHTLALT 346



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 27/268 (10%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           VP+ AA    S         L + ++G V+SWG   +  LG G+ + +  P+ +      
Sbjct: 129 VPMLAAGTQFS---------LGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVE---AL 176

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS---RHTPTLVTELSDVGAVS 378
                ++AG  H+ A+T DG +++WG   +G+LG G +       TP  V  +S+V A++
Sbjct: 177 SNAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIA 236

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
               HT  L++DG+ VWS GS + G+LG  D      P+ +EAL    V  + AG + S+
Sbjct: 237 AQTYHTQALTRDGN-VWSWGSNDFGQLGMGDQNDRDAPQKVEALSN--VVAINAGGNHSL 293

Query: 439 ALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           A+T DG V+ WG      LGL         P  V  LS+  +V ++ G  H LAL++   
Sbjct: 294 AVTRDGQVWAWGENSEGQLGL-GDLWDRDAPQKVEALSN--VVAINAGGDHTLALTRDGS 350

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
           V+AWG N  GQ G     +  ++P  V+
Sbjct: 351 VWAWGKNGRGQIGTGEGQSLYNEPVHVI 378



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 13/223 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V++WGCN +  +    R   + P+     SN   + AG   T  L   G +  +G    G
Sbjct: 148 VWSWGCNTYATLGLGDRVDRNTPQKVEALSNAVALAAGDDHTLALTRDGSVWSWGWNYNG 207

Query: 247 WLGLAN---TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
            LGL +    T +  PK+V    AI +++       H   +T +G V+SWG  + G+LG 
Sbjct: 208 QLGLGSIHEDTYESTPKKVE---AISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGM 264

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+   +  P+ +        V  ++AG +HS AVT DG ++ WGE   G+LG GDL  R 
Sbjct: 265 GDQNDRDAPQKVE---ALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQLGLGDLWDRD 321

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
            P  V  LS+V A++ G  HTL L++DG +VW+ G    G++G
Sbjct: 322 APQKVEALSNVVAINAGGDHTLALTRDG-SVWAWGKNGRGQIG 363



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 129/307 (42%), Gaps = 58/307 (18%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + VT  G +++WG  + G+LG G T  Q  P  +    Y   V  ++ G  HS AV+ DG
Sbjct: 1   MAVTQGGALWTWGGNDDGRLGIGATGDQNLPVQLS---YLSNVVSLAGGEKHSLAVSGDG 57

Query: 342 LLYTWGEGDHGRL--------------------------------GHGDLKS-------R 362
            +++WG    G+L                                G GD+         +
Sbjct: 58  SVWSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFK 117

Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             P L    + V  ++ G   +L L  DG TVWS G      LG  D     TP+ +EAL
Sbjct: 118 TAPGLSGCGNAVPMLAAGTQFSLGLKTDG-TVWSWGCNTYATLGLGDRVDRNTPQKVEAL 176

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS--SSISFHTPVLVTGLSSHQI 474
                  + AG   ++ALT DG V+ WG      LGL S        TP  V  +S+  +
Sbjct: 177 SN--AVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAISN--V 232

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
             ++    H  AL++   V++WGSN  GQ G  +  N  D P KV  L +V    I AG 
Sbjct: 233 TAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGD-QNDRDAPQKVEALSNVVA--INAGG 289

Query: 535 LFSIAYT 541
             S+A T
Sbjct: 290 NHSLAVT 296



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 17/217 (7%)

Query: 154 LGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSK---VYTWGCNLHHQI-LDEVRGKC 209
           LGDR   N+   +++ S   +    GD D ++A ++   V++WG N + Q+ L  +    
Sbjct: 161 LGDRVDRNTPQKVEALSN-AVALAAGD-DHTLALTRDGSVWSWGWNYNGQLGLGSIHEDT 218

Query: 210 --SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPL 264
             S P+     SN+  I A  + T  L   G +  +G    G LG+ +   +  P++V  
Sbjct: 219 YESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDAPQKVEA 278

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
            + +V+++       H L VT +G+V++WG    G+LG G+   +  P+ +        V
Sbjct: 279 LSNVVAINAGG---NHSLAVTRDGQVWAWGENSEGQLGLGDLWDRDAPQKVE---ALSNV 332

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
             ++AG  H+ A+T DG ++ WG+   G++G G+ +S
Sbjct: 333 VAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGEGQS 369


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 10/250 (4%)

Query: 211 RPRL-QSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           RP+L ++L     + + AG   T  L   G     G    G LG  +T  +P+PK V   
Sbjct: 206 RPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRV 324
             I  +       ++VL +T +G VYS+G G +  LGHG    + +P++I      G  +
Sbjct: 266 KTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHI 325

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGESH 383
            +VSAG  H+ A+  +G +YTWG+G  G LGHGD   + TP ++  L++  AV  C    
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKR 385

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              +  +G  ++  G    G LG  D G   KV  P+V+E L+  RV +V  G   ++ +
Sbjct: 386 KTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445

Query: 441 TWDGLVFWWG 450
           T  G +F +G
Sbjct: 446 TQRGRIFGFG 455



 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 14/248 (5%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           ++ EG  Y+ G   HG+LGHG+TL +  PK++        V Q++AG S+  A+T+DG +
Sbjct: 231 LSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSV 290

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMGS 399
           Y++G G +  LGHG+ +    P ++      G     VS G+ H + L  +G  V++ G 
Sbjct: 291 YSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGR-VYTWGK 349

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL--- 453
           G  G LGH D     TP+V+  L      +VCA    +  L   GL++   W G G    
Sbjct: 350 GYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGF 409

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             R  S     P ++  L  H++  VS G  H + ++Q   ++ +G N   Q G D+   
Sbjct: 410 PDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRG 469

Query: 512 PVDQPSKV 519
            ++ P+++
Sbjct: 470 CLE-PTEI 476



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 18/296 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMG 317
           P   P  A +  +S ++   A VL     G+V + G       GH +T     RPKL+  
Sbjct: 156 PIEFPFPAQVAQVSATQNHSAFVL---QSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEA 212

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
            L G    QV+AG   +  ++ +G  YT G   HG+LGHGD   R  P +V  L  +G V
Sbjct: 213 -LKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPV 271

Query: 378 ---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK--FRVRKVCA 432
              + G S+ L L+QDG +V+S GSG+   LGH +      P+VI+A ++    + +V A
Sbjct: 272 VQIAAGPSYVLALTQDG-SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSA 330

Query: 433 GTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G   +VAL  +G V+ WG G              TP ++  L++   V V         L
Sbjct: 331 GDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVL 390

Query: 488 SQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +   +Y +G    G  G      S+ V +P  +  L+   V Q+  G   +I  T
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVT 446



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 190 VYTWG-----CNLHHQILDEVRGKCSRPR-LQSLPSNIRHI---EAGQFCTFLLDSTGGL 240
           VY++G     C  H +  DE++     PR +Q+      HI    AG      LDS G +
Sbjct: 290 VYSFGSGSNFCLGHGEQQDELQ-----PRVIQAFKRKGIHILRVSAGDEHAVALDSNGRV 344

Query: 241 LVYGKGWLGL-----ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEV-YSWG 294
             +GKG+ G       N  I P    V L      L+V  C+      V  EG + Y +G
Sbjct: 345 YTWGKGYCGALGHGDENDKITP-QVLVNLNNC---LAVQVCARKRKTFVLVEGGLLYGFG 400

Query: 295 VGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
               G LG    G +    RP+ ++  L   RV+QVS G  H+  VT+ G ++ +G+ + 
Sbjct: 401 WMGFGSLGFPDRGVSDKVLRPR-VLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNER 459

Query: 352 GRLGHGDLKSRHTPT 366
            +LGH  L+    PT
Sbjct: 460 AQLGHDSLRGCLEPT 474


>gi|392944589|ref|ZP_10310231.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Frankia
           sp. QA3]
 gi|392287883|gb|EIV93907.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Frankia
           sp. QA3]
          Length = 408

 Score =  116 bits (290), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 151/332 (45%), Gaps = 27/332 (8%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH 280
           I AG++  + +   G    +G    G LG    T   +P RV     +V+L+       +
Sbjct: 85  IAAGRYAGYAVHRDGTAWAWGYNAYGQLGNGTITNSAVPVRVSGLTRVVALA---GGSVN 141

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
              +  +G V+SWG   +G+LG+G T + R P  ++G     RV  +++G +   A+ +D
Sbjct: 142 GYALRQDGTVWSWGYNNYGQLGNGTTTNSRVPVRVVGL---DRVIAIASGGTTGYALRQD 198

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           G ++ WG  D G+LG+G   +   P  V  L  V A++ G+     L +DG TVW+ G  
Sbjct: 199 GTVWAWGYNDEGQLGNGTTANSPLPVRVLGLHGVRAIAGGQETGYALRRDG-TVWAWGHN 257

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL--------G 452
           N G+LG+      T P  I  L +       +  +   AL  DG  + WGL        G
Sbjct: 258 NHGQLGNGTVVSSTIPVAIRNLSEVTAIAASSEGNSGYALRGDGTAWAWGLNNTGQLGNG 317

Query: 453 LRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
              +S+    PV VTG +    +  +S G     A+ +   V+AWGSN  GQ G    + 
Sbjct: 318 TDDTSL---VPVQVTGSTGLVGVTAISAGSFSGYAVRRDGTVWAWGSNFFGQLGNGTTTP 374

Query: 512 PVD-QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               +P +V G   V   +  AG  FS  YT+
Sbjct: 375 SFSLRPVRVSG---VARAEAIAGGGFS-GYTL 402



 Score =  107 bits (266), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 6/218 (2%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           +SWG    G LG+G T +   P  + G     +V  ++AG     AV  DG  + WG   
Sbjct: 49  WSWGYNGLGHLGNGTTTNSAVPVRVTGLTGLTQVVGIAAGRYAGYAVHRDGTAWAWGYNA 108

Query: 351 HGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           +G+LG+G + +   P  V+ L+ V A++ G  +   L QDG TVWS G  N G+LG+  T
Sbjct: 109 YGQLGNGTITNSAVPVRVSGLTRVVALAGGSVNGYALRQDG-TVWSWGYNNYGQLGNGTT 167

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---GLRSSSISFHTPVLVT 467
                P  +  L   RV  + +G +   AL  DG V+ WG    G   +  + ++P+ V 
Sbjct: 168 TNSRVPVRVVGLD--RVIAIASGGTTGYALRQDGTVWAWGYNDEGQLGNGTTANSPLPVR 225

Query: 468 GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            L  H +  ++ G     AL +   V+AWG N  GQ G
Sbjct: 226 VLGLHGVRAIAGGQETGYALRRDGTVWAWGHNNHGQLG 263



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 16/212 (7%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
           V+ WG N   Q+ +        P R+  L   +R I  GQ   + L   G +  +G    
Sbjct: 201 VWAWGYNDEGQLGNGTTANSPLPVRVLGL-HGVRAIAGGQETGYALRRDGTVWAWGHNNH 259

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHV-LTVTSEGEVYSWGVGEHGKLGHG 304
           G LG        +P  +   + + +++ S  SE +    +  +G  ++WG+   G+LG+G
Sbjct: 260 GQLGNGTVVSSTIPVAIRNLSEVTAIAAS--SEGNSGYALRGDGTAWAWGLNNTGQLGNG 317

Query: 305 NTLSQRRPKLIMG--GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
              +   P  + G  GL G  VT +SAG     AV  DG ++ WG    G+LG+G     
Sbjct: 318 TDDTSLVPVQVTGSTGLVG--VTAISAGSFSGYAVRRDGTVWAWGSNFFGQLGNGTTTPS 375

Query: 363 HT--PTLVTELSDVGAVSCG--ESHTLVLSQD 390
            +  P  V+ ++   A++ G    +TLV + D
Sbjct: 376 FSLRPVRVSGVARAEAIAGGGFSGYTLVNTWD 407


>gi|315506657|ref|YP_004085544.1| hyalin [Micromonospora sp. L5]
 gi|315413276|gb|ADU11393.1| Hyalin [Micromonospora sp. L5]
          Length = 1017

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 168/335 (50%), Gaps = 32/335 (9%)

Query: 190 VYTWGCNLHHQILD-EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           V  WG NL  Q+ +  +  + +   +  L S I  + +G   ++ L  +G +  +G+  L
Sbjct: 677 VSAWGDNLLGQLGNGSIFSETTAVPVSGL-SGILAVSSGDASSYALTRSGVVHSWGENLL 735

Query: 249 G-LANTTIQPLPKRVPLEAAIVSLSVSK---CSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
           G L N +   L  R P++  +  L+ +K       HVL + S+G V +WG    G+LG  
Sbjct: 736 GQLGNGSR--LQSRRPVQ--VDGLTGAKQIAAGNDHVLALKSDGTVAAWGSNLAGQLGRT 791

Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHS-----HSAAVTEDGLLYTWGEGDHGRLGHGDL 359
             LS  +P  + G      V QV+AG +     HS A+  DG ++TWG G +G+LG GD 
Sbjct: 792 GVLSATKPAAVPGL---TSVVQVAAGGTPGLAGHSVALKGDGTVWTWGHGLNGQLGLGDH 848

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED-TGKVTTPKV 418
           +S  TPT V  LS+V  ++   ++T  L  DG TVW+ G GN G++G+ D T   TTP  
Sbjct: 849 RSTATPTQVPGLSNVVLIAADGNNTYALKSDG-TVWAWGDGNHGQIGNPDATHSQTTPLK 907

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG-LRSSSISFHTPVLVTGLSS 471
           +       V  + AG++ ++A+  DG V+ WG      LG  R   +   TPV  +GL+ 
Sbjct: 908 VNI---SGVVSIDAGSTTAMAVKGDGTVWGWGSNASGQLGDDRDCGLHCSTPVKASGLTG 964

Query: 472 HQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                ++ G  H L ++    V+ +G N +GQ G 
Sbjct: 965 AGW--IASGLLHSLVVNTDGNVHGYGGNLLGQLGN 997



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 22/296 (7%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL 282
           + AG+  +  ++    +  +G   LG L N +I      VP+      L+VS   +A   
Sbjct: 661 VAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSETTAVPVSGLSGILAVSS-GDASSY 719

Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
            +T  G V+SWG    G+LG+G+ L  RRP + + GL G +  Q++AG+ H  A+  DG 
Sbjct: 720 ALTRSGVVHSWGENLLGQLGNGSRLQSRRP-VQVDGLTGAK--QIAAGNDHVLALKSDGT 776

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES-----HTLVLSQDGHTVWSM 397
           +  WG    G+LG   + S   P  V  L+ V  V+ G +     H++ L  DG TVW+ 
Sbjct: 777 VAAWGSNLAGQLGRTGVLSATKPAAVPGLTSVVQVAAGGTPGLAGHSVALKGDG-TVWTW 835

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------L 451
           G G  G+LG  D     TP  +  L    V  + A  + + AL  DG V+ WG      +
Sbjct: 836 GHGLNGQLGLGDHRSTATPTQVPGLSN--VVLIAADGNNTYALKSDGTVWAWGDGNHGQI 893

Query: 452 GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQD 507
           G   ++ S  TP+ V   +   +V +  G +  +A+     V+ WGSN  GQ G D
Sbjct: 894 GNPDATHSQTTPLKV---NISGVVSIDAGSTTAMAVKGDGTVWGWGSNASGQLGDD 946



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 16/211 (7%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLV 386
           V+AG  HS AV +D  +  WG+   G+LG+G + S  T   V+ LS + AVS G++ +  
Sbjct: 661 VAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSETTAVPVSGLSGILAVSSGDASSYA 720

Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
           L++ G  V S G   LG+LG+    +   P  ++ L     +++ AG    +AL  DG V
Sbjct: 721 LTRSG-VVHSWGENLLGQLGNGSRLQSRRPVQVDGLTG--AKQIAAGNDHVLALKSDGTV 777

Query: 447 FWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDS-----HVLALSQYNEVYAW 496
             WG  L     R+  +S   P  V GL+S  +V V+ G +     H +AL     V+ W
Sbjct: 778 AAWGSNLAGQLGRTGVLSATKPAAVPGLTS--VVQVAAGGTPGLAGHSVALKGDGTVWTW 835

Query: 497 GSNTMGQCGQDNFSNPVDQPSKVVGLEDVCV 527
           G    GQ G  +  +    P++V GL +V +
Sbjct: 836 GHGLNGQLGLGDHRSTA-TPTQVPGLSNVVL 865



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 5/187 (2%)

Query: 190  VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
            V+TWG  L+ Q+ L + R   +  ++  L SN+  I A    T+ L S G +  +G G  
Sbjct: 832  VWTWGHGLNGQLGLGDHRSTATPTQVPGL-SNVVLIAADGNNTYALKSDGTVWAWGDGNH 890

Query: 249  GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            G          +  PL+  I  +          + V  +G V+ WG    G+LG      
Sbjct: 891  GQIGNPDATHSQTTPLKVNISGVVSIDAGSTTAMAVKGDGTVWGWGSNASGQLGDDRDCG 950

Query: 309  QR-RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
                  +   GL G     +++G  HS  V  DG ++ +G    G+LG+G  K   TPT 
Sbjct: 951  LHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGNLLGQLGNGTRKGATTPTT 1008

Query: 368  VTELSDV 374
            V+ ++ V
Sbjct: 1009 VSGVTAV 1015


>gi|115375506|ref|ZP_01462765.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|115367461|gb|EAU66437.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 531

 Score =  116 bits (290), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 88/243 (36%), Positives = 123/243 (50%), Gaps = 29/243 (11%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGN--TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           V  +G +Y WG    G+LG G   T  QR PK + G    + V  V+   +HS A+ EDG
Sbjct: 174 VVRQGALYLWGRNNRGQLGLGAEVTADQRVPKPVPG---MEGVAAVALNQNHSMALKEDG 230

Query: 342 LLYTWGEGDHGRLGHG-----------DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
            ++ WGE   G+LG G           DL +R +PT V  LS   A++ G  H+LVL +D
Sbjct: 231 TVWAWGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSGAVALALGYRHSLVLMED 290

Query: 391 GHTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           G TV + G  + G+LG   T      P ++  L +  V KV AG+  SVAL  DG V+ W
Sbjct: 291 G-TVRAFGDNSTGQLGDGTTESPRDYPVLVGGLTE--VVKVVAGSMHSVALKRDGTVWVW 347

Query: 450 G------LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           G      LG  +   + H TP  V G+++   VD++ G  H+L L     V +WG +  G
Sbjct: 348 GRNTYGNLGQGTQDSTAHPTPAQVPGVANG--VDIATGRDHILVLHAGGTVSSWGLDASG 405

Query: 503 QCG 505
           Q G
Sbjct: 406 QLG 408



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 145/353 (41%), Gaps = 39/353 (11%)

Query: 185 VAHSKVYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           V    +Y WG N   Q+    EV      P+       +  +   Q  +  L   G +  
Sbjct: 175 VRQGALYLWGRNNRGQLGLGAEVTADQRVPKPVPGMEGVAAVALNQNHSMALKEDGTVWA 234

Query: 243 YG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--------HVLTVTSEGEVY 291
           +G   +G LGL        P+   L A      V   S A        H L +  +G V 
Sbjct: 235 WGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSGAVALALGYRHSLVLMEDGTVR 294

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           ++G    G+LG G T S R   +++GGL    V +V AG  HS A+  DG ++ WG   +
Sbjct: 295 AFGDNSTGQLGDGTTESPRDYPVLVGGL--TEVVKVVAGSMHSVALKRDGTVWVWGRNTY 352

Query: 352 GRLGHG--DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG---SGNLG--- 403
           G LG G  D  +  TP  V  +++   ++ G  H LVL   G TV S G   SG LG   
Sbjct: 353 GNLGQGTQDSTAHPTPAQVPGVANGVDIATGRDHILVLHAGG-TVSSWGLDASGQLGFGE 411

Query: 404 -KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSS 457
              G +    V    +++A      R V A  + S A   DG +  WG          S 
Sbjct: 412 AIPGEQSNAPVQVKNLVDA------RFVFANGNMSYAQRADGTLLSWGQNFNGQLGNGSK 465

Query: 458 ISFHTPV-LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
              + PV    GL    ++ +S G +HV+A  +   ++ WG +  G  G+++ 
Sbjct: 466 TDTNVPVPAAEGLKG--LLTLSPGATHVVAFHRDGSLFTWGWSFSGSLGREDL 516



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 34/241 (14%)

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD--LKS 361
           GNT +++      GGL G       AG SH+  V + G LY WG  + G+LG G      
Sbjct: 150 GNT-AEQTVSFHFGGLSG-------AGGSHTGVVRQ-GALYLWGRNNRGQLGLGAEVTAD 200

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGKVTTPKV 418
           +  P  V  +  V AV+  ++H++ L +DG TVW+ G    G+LG     + G+  TP +
Sbjct: 201 QRVPKPVPGMEGVAAVALNQNHSMALKEDG-TVWAWGENAQGQLGLGKPPEAGQPRTPDL 259

Query: 419 IEALRKFRVRKVCA------GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
                  RV  +        G   S+ L  DG V  +G      LG  ++      PVLV
Sbjct: 260 TARWSPTRVEGLSGAVALALGYRHSLVLMEDGTVRAFGDNSTGQLGDGTTESPRDYPVLV 319

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG---QDNFSNPVDQPSKVVGLE 523
            GL+  ++V V  G  H +AL +   V+ WG NT G  G   QD+ ++P   P++V G+ 
Sbjct: 320 GGLT--EVVKVVAGSMHSVALKRDGTVWVWGRNTYGNLGQGTQDSTAHPT--PAQVPGVA 375

Query: 524 D 524
           +
Sbjct: 376 N 376



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 60/182 (32%), Positives = 84/182 (46%), Gaps = 24/182 (13%)

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           G    G SHT V+ Q    +W   + G LG LG E T     PK +  +    V  V   
Sbjct: 163 GLSGAGGSHTGVVRQGALYLWGRNNRGQLG-LGAEVTADQRVPKPVPGMEG--VAAVALN 219

Query: 434 TSFSVALTWDGLVFWWG------LGL---------RSSSISFH-TPVLVTGLSSHQIVDV 477
            + S+AL  DG V+ WG      LGL         R+  ++   +P  V GLS    V +
Sbjct: 220 QNHSMALKEDGTVWAWGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSG--AVAL 277

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           ++G  H L L +   V A+G N+ GQ G     +P D P  V GL +V   ++ AGS+ S
Sbjct: 278 ALGYRHSLVLMEDGTVRAFGDNSTGQLGDGTTESPRDYPVLVGGLTEVV--KVVAGSMHS 335

Query: 538 IA 539
           +A
Sbjct: 336 VA 337



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 44/258 (17%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNI---GDTDI---------SVAHSK- 189
           LV + D  ++  GD  +       D T+     Y +   G T++         SVA  + 
Sbjct: 285 LVLMEDGTVRAFGDNSTGQLG---DGTTESPRDYPVLVGGLTEVVKVVAGSMHSVALKRD 341

Query: 190 --VYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYG- 244
             V+ WG N +  +    +   + P    +P  +N   I  G+    +L + G +  +G 
Sbjct: 342 GTVWVWGRNTYGNLGQGTQDSTAHPTPAQVPGVANGVDIATGRDHILVLHAGGTVSSWGL 401

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT--------SEGEVYSWG 294
              G LG            +P E +   + V    +A  +           ++G + SWG
Sbjct: 402 DASGQLGFGEA--------IPGEQSNAPVQVKNLVDARFVFANGNMSYAQRADGTLLSWG 453

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
              +G+LG+G+      P     GL G  +  +S G +H  A   DG L+TWG    G L
Sbjct: 454 QNFNGQLGNGSKTDTNVPVPAAEGLKG--LLTLSPGATHVVAFHRDGSLFTWGWSFSGSL 511

Query: 355 GHGDLKSRHT---PTLVT 369
           G  DL  R T   P LVT
Sbjct: 512 GREDLLDRWTYTEPILVT 529


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  116 bits (290), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 88/274 (32%), Positives = 129/274 (47%), Gaps = 18/274 (6%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + S+G +Y+WG    G+LG+ + L+   P L+     G   TQVSAG  HS AV  
Sbjct: 60  HSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLV-STPDGVTFTQVSAGADHSLAVGS 118

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS-----DVGAVSCGESHTLVLSQDGHTV 394
           DG  Y WG    GRLG+G       P LV+  +      +  V  G  H+L +  +G  +
Sbjct: 119 DGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNG-DI 177

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEA---LRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
           +S G    G+LG   T   + P  + A          +V AG   S+A+  +G  + WG 
Sbjct: 178 YSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGE 237

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LG+ S S +   P LV+  +      VS GD H LA+    + YAWG+N  GQ G
Sbjct: 238 ARGGQLGIGSISRT-PAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLG 296

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
               ++ +  P  V  +  + V Q+ AG+  S+A
Sbjct: 297 NATTTSSL-APVLVSPMGGLAVTQVSAGADHSLA 329



 Score =  108 bits (270), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 119/406 (29%), Positives = 170/406 (41%), Gaps = 41/406 (10%)

Query: 147 ADDNIKPLGDRKSSN-SNTDIDSTSTPKLTYN---IGDTDISVA--HS-------KVYTW 193
           +D NI   G   S    N  I ++S P L      +  T +S    HS         Y W
Sbjct: 66  SDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAW 125

Query: 194 GCNLHHQILDEVRGKCSRPRLQS---LPS--NIRHIEAGQFCTFLLDSTGGLLVYG---K 245
           G N   ++ +      S P L S   +PS   I  + AG F +  + S G +  +G    
Sbjct: 126 GRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRS 185

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS--EAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LG   T    +P +V   A    ++ S+ S  + H L + S G+ Y+WG    G+LG 
Sbjct: 186 GQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGI 245

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+      P L+     G   TQVSAG  HS AV  DG  Y WG  D G+LG+    S  
Sbjct: 246 GSISRTPAPALV-SAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSL 304

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
            P LV+ +    V  VS G  H+L +  DG+  ++ G    G+LG+      T P ++ A
Sbjct: 305 APVLVSPMGGLAVTQVSAGADHSLAIGADGNA-YAWGLNVNGQLGNNTITTSTVPVMVTA 363

Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
                  ++ AG   S+    D   + WG        SF    L  G S   +V V+I  
Sbjct: 364 PDGVTFTRIEAGGLHSLTAASDENTYTWGAN------SFGQ--LGNGTSDGSLVPVAISR 415

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCV 527
             V+      EV ++G     +  Q N S  V  P+   G+ DV V
Sbjct: 416 FPVI-----TEV-SFGGVVGTELSQSNGSWTVVAPAHEPGVVDVIV 455



 Score = 91.7 bits (226), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 23/242 (9%)

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV 374
           + G L G   TQVSAG +HS A+  DG +Y WG    G+LG+  + +   P LV+    V
Sbjct: 42  VSGVLPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV 101

Query: 375 --GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA---LRKFRVRK 429
               VS G  H+L +  DG+  ++ G    G+LG+  +   + P ++ A        + +
Sbjct: 102 TFTQVSAGADHSLAVGSDGNA-YAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQ 160

Query: 430 VCAGTSFSVALTWDGLVFWWGLGLRS------SSISFHTPVLVT------GLSSHQIVDV 477
           V AG   S+A+  +G ++ WG   RS      ++++   P+ V+      G++  Q   V
Sbjct: 161 VMAGGFHSLAVGSNGDIYSWGYN-RSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQ---V 216

Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
           S GD H LA+    + YAWG    GQ G  + S     P+ V     V   Q+ AG L S
Sbjct: 217 SAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISR-TPAPALVSAPAGVSFTQVSAGDLHS 275

Query: 538 IA 539
           +A
Sbjct: 276 LA 277


>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
           vitripennis]
          Length = 533

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
            L VT +G+VY+ G    G LG G++ S   PK +   L GK +   + G   H  A+T 
Sbjct: 36  ALIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEA-LCGKGIKTFAYGSGPHVLALTN 94

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSM 397
            G +Y+WG   +  LG+G      TPTL   L++  V A++CG  H++ L++DG  V+S 
Sbjct: 95  KGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGE-VYSW 153

Query: 398 GSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
           G  N G++    +     P KV  AL    V  +  G + S+A+T  G VF WG      
Sbjct: 154 GQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYNGVGQ 213

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           LG+  + ++  +P  VTGL+   I  V+ G +H LALS    +Y WG N  GQ G  N +
Sbjct: 214 LGI-GNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKA 272

Query: 511 N 511
           N
Sbjct: 273 N 273



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 19/282 (6%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  ++     PK+V         + +  S  HVL +T++GE+YSWG   + +LG+G+
Sbjct: 54  GCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKGEIYSWGHNGYCELGNGS 113

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P L +  L  K VT ++ G  HS A+TEDG +Y+WG+ + G++  G   ++  P
Sbjct: 114 TNQGLTPTLCL-NLNEKVVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAP 172

Query: 366 TLVTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             V        V +++CG++ ++ ++  G  V+  G   +G+LG  +     +P  +  L
Sbjct: 173 RKVNSALTGKVVVSIACGQTSSMAVTDVGE-VFGWGYNGVGQLGIGNYVNQLSPCKVTGL 231

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               + KV  G + ++AL+ +G ++ WG      LGL + + +  TP+ +      +I D
Sbjct: 232 NGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKANAC-TPIKLNVTEMGRISD 290

Query: 477 VS-IGDSHV-LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           ++ +  +H+ +A+ Q  ++Y W     GQC   + ++P+  P
Sbjct: 291 IATLHYNHISVAMGQGGKIYMW-----GQCRGQSVTSPMATP 327



 Score = 94.4 bits (233), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 7/223 (3%)

Query: 234 LDSTGGLLVYG-KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
           L + G +  +G  G+  L N +T Q L   + L      ++   C   H + +T +GEVY
Sbjct: 92  LTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALTEDGEVY 151

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           SWG    G++  G + +Q  P+ +   L GK V  ++ G + S AVT+ G ++ WG    
Sbjct: 152 SWGQNNCGQVSSGISSNQGAPRKVNSALTGKVVVSIACGQTSSMAVTDVGEVFGWGYNGV 211

Query: 352 GRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           G+LG G+  ++ +P  VT L+   +  V+CG +HTL LS +G  ++  G    G+LG  +
Sbjct: 212 GQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLALSDEG-ALYVWGGNGFGQLGLGN 270

Query: 410 TGKVTTPKVIEALRKFRVRKVCA--GTSFSVALTWDGLVFWWG 450
                TP  +      R+  +        SVA+   G ++ WG
Sbjct: 271 KANACTPIKLNVTEMGRISDIATLHYNHISVAMGQGGKIYMWG 313


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 18/262 (6%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + +T EG+VY+ G   HG+LGHG+T+ +  PK+I        V QV+AG S++ AVT+DG
Sbjct: 220 VILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDG 279

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELS----DVGAVSCGESHTLVLSQDGHTVWSM 397
            ++++G   +  LGHGD  +   P  +         V  VS G+ H + L   G+ V++ 
Sbjct: 280 TVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGY-VYTW 338

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL- 453
           G G  G LGH D    T+P++I +L+     +VCA    +  LT +G V    W G G  
Sbjct: 339 GRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSL 398

Query: 454 ----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
               R SS     P ++  L  H +  +S G  H +A++    V+ +G N   Q GQ+  
Sbjct: 399 GFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYI 458

Query: 510 SNPVDQPSKVV----GLEDVCV 527
              + +P++++     +ED+ +
Sbjct: 459 RGCL-KPTEIMFHKSSMEDIAI 479



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 122/253 (48%), Gaps = 24/253 (9%)

Query: 218 PSNIRHIEAGQFC---------TFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           P+ I  ++ G FC         T +L   G +   G    G LG  +T  +  PK + L 
Sbjct: 198 PTQIEALK-GTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELF 256

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR-- 323
                +       ++   VT +G V+S+G   +  LGHG+  ++  P+ I    + +R  
Sbjct: 257 EGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQS--FKRRNI 314

Query: 324 -VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGE 381
            V +VSAG  H+ A+   G +YTWG G  G LGHGD   + +P L+  L    AV  C  
Sbjct: 315 HVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCAR 374

Query: 382 SH-TLVLSQDGHTV---WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
              T VL+ +G  V   W MG G+LG    E + KV  P V+++LR   V ++  G   +
Sbjct: 375 KRKTFVLTDEGSVVAFGW-MGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHT 433

Query: 438 VALTWDGLVFWWG 450
           VA+T  G+VF +G
Sbjct: 434 VAVTNKGIVFGFG 446



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 123/266 (46%), Gaps = 37/266 (13%)

Query: 290 VYSWGVGEHGKLGHGNTLSQ-------RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
           VYS G    G LGHG   +Q         P L        RV  +SA H+H+A VTE G 
Sbjct: 122 VYSCGSSLCGVLGHGPDTTQCVAFSRVSFPAL-------SRVVNISAFHNHAAFVTETGQ 174

Query: 343 LYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGS 399
           ++T G+      GHGD+ ++   PT +  L       V+ G S T++L+++G  V++ GS
Sbjct: 175 VFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQ-VYTCGS 233

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI 458
              G+LGH DT     PK+IE       V +V AG S++ A+T DG V  +G     S  
Sbjct: 234 NTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSFG-----SCT 288

Query: 459 SF-------HTPVLVTGLSSHQ-----IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           +F       H  +L   + S +     +V VS GD H +AL     VY WG    G  G 
Sbjct: 289 NFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGH 348

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICA 532
            +  N    P  +  L+     Q+CA
Sbjct: 349 GD-ENDKTSPELIGSLKGQVAVQVCA 373



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 117/275 (42%), Gaps = 15/275 (5%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNT-LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
           H   VT  G+V++ G       GHG+   +  RP  I   L G    QV+ G S +  +T
Sbjct: 165 HAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEA-LKGTFCKQVATGLSFTVILT 223

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGESHTLVLSQDGHTVW 395
            +G +YT G   HG+LGHGD   R  P ++      S V  V+ G S+T  ++ DG TV 
Sbjct: 224 REGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDG-TVH 282

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEAL--RKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           S GS     LGH D      P+ I++   R   V +V AG   +VAL   G V+ WG G 
Sbjct: 283 SFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGY 342

Query: 454 -----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--Q 506
                        +P L+  L     V V         L+    V A+G    G  G   
Sbjct: 343 CGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPD 402

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              S+ V +P  +  L    V QI  G   ++A T
Sbjct: 403 RESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVT 437



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 14/255 (5%)

Query: 166 IDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSL---PSNIR 222
           +  T   ++   +  T I     +VYT G N H Q+        + P++  L    S + 
Sbjct: 204 LKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVV 263

Query: 223 HIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSE 278
            + AG   TF +   G +  +G      LG  +   + LP+ +   +   + +      +
Sbjct: 264 QVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGD 323

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
            H + + + G VY+WG G  G LGHG+   +  P+LI G L G+   QV A    +  +T
Sbjct: 324 EHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELI-GSLKGQVAVQVCARKRKTFVLT 382

Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRH---TPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           ++G +  +G    G LG  D +S      P ++  L    V  +S G  HT+ ++  G  
Sbjct: 383 DEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKG-I 441

Query: 394 VWSMGSGNLGKLGHE 408
           V+  G     +LG E
Sbjct: 442 VFGFGDNERAQLGQE 456



 Score = 44.7 bits (104), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 6/154 (3%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  + AG      LD+ G +  +G+G+   LG  +   +  P+ +      V++ V   
Sbjct: 315 HVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCA- 373

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR--PKLIMGGLYGKRVTQVSAGHSHS 334
            +     +T EG V ++G    G LG  +  S  +     ++  L G  V+Q+S G  H+
Sbjct: 374 RKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHT 433

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
            AVT  G+++ +G+ +  +LG   ++    PT +
Sbjct: 434 VAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEI 467


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 10/250 (4%)

Query: 211 RPRLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE 265
           RP+L  +   +  + + AG   T  L   G     G    G LG  +T  +P PK V   
Sbjct: 206 RPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFL 265

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG-GLYGKRV 324
             I  +       ++VL VT +G VYS+G G +  LGHG    + +P++I      G  +
Sbjct: 266 KNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHI 325

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-CGESH 383
            +VSAG  H+ A+  +G +YTWG+G  G LGHGD   + TP ++  L +  AV  C    
Sbjct: 326 LRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKR 385

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
              +  +G  ++  G    G LG  D G   KV  P+V+E L+  RV +V  G   ++ +
Sbjct: 386 KTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445

Query: 441 TWDGLVFWWG 450
           T  G +F +G
Sbjct: 446 TQGGRIFGFG 455



 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 175/388 (45%), Gaps = 35/388 (9%)

Query: 158 KSSNSNTDIDSTSTPKLTYNIGDTD-ISVAHSKVYTWGCNLHHQIL---DEVRGKCSRPR 213
           +S   ++D+  TS  K+    G    + + +SKVY+ G +L   +    +  +     P 
Sbjct: 98  QSVEQSSDMVETSQGKMQIATGKYHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPI 157

Query: 214 LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK------GWLGLANTTIQP----LPKRVP 263
               P+ +  + A Q  +  +  +G +L  G       G L  +    +P    + K  P
Sbjct: 158 EFPFPAQVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTP 217

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            +     L  +       + ++ EG  Y+ G   HG+LGHG+T+ +  PK++        
Sbjct: 218 CKQVAAGLHFT-------VFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGP 270

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSC 379
           V Q++AG S+  AVT+DG +Y++G G +  LGHG+ +    P ++      G     VS 
Sbjct: 271 VVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSA 330

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G+ H + L  +G  V++ G G  G LGH D     TP+V+  L+     +VCA    +  
Sbjct: 331 GDEHAVALDSNGR-VYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFV 389

Query: 440 LTWDGLVF---WWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           L   GL++   W G G      R  S     P ++  L  H++  VS G  H + ++Q  
Sbjct: 390 LVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQGG 449

Query: 492 EVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
            ++ +G N   Q G ++    ++ P+++
Sbjct: 450 RIFGFGDNERAQLGHNSLRGCLE-PTEI 476



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 18/296 (6%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMG 317
           P   P  A +  +S ++   A VL     GEV + G       GH +T     RPKL+  
Sbjct: 156 PIEFPFPAQVAQVSATQNHSAFVL---QSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEV 212

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV 377
            L G    QV+AG   +  ++ +G  YT G   HG+LGHGD   R  P +V  L ++G V
Sbjct: 213 -LKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPV 271

Query: 378 ---SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK--FRVRKVCA 432
              + G S+ L ++QDG +V+S GSG+   LGH +      P+VI+A ++    + +V A
Sbjct: 272 VQIAAGPSYVLAVTQDG-SVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSA 330

Query: 433 GTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
           G   +VAL  +G V+ WG G              TP ++  L +   V V         L
Sbjct: 331 GDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFVL 390

Query: 488 SQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            +   +Y +G    G  G      S+ V +P  +  L+   V Q+  G   +I  T
Sbjct: 391 VEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVT 446


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  115 bits (289), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 94/318 (29%), Positives = 148/318 (46%), Gaps = 28/318 (8%)

Query: 233 LLDSTGGLLVYG---KGWLGLANTTIQPLPKRV----PLEAAIVSLSVSKCSEAHVLTVT 285
           ++ + G L  +G    G LG  NT     P  V    P +  +V+     C   H +  T
Sbjct: 49  VVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVA-----CGRNHTIAAT 103

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
             G +YS+G G  G+LGHG+      PK+I G L  ++   ++ G   SAA+TE+G LYT
Sbjct: 104 ESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEG-LDVQKYKHLACGSDFSAAITENGELYT 162

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
           WG    G+ G G+      PT +     V  VSCG  H  V+++DG +++  G    GKL
Sbjct: 163 WGSCGEGQNGLGE--DTEIPTRLHLHGKVRMVSCGYYHMAVVTEDG-SLYMCGEKEGGKL 219

Query: 406 G--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           G  HE     +  + I+++    V   C G  F+  +T +G V+ +G      LGL SS 
Sbjct: 220 GLDHEQLDNTSQLQKIKSIEDQVVVAAC-GAEFTAVVTKNGSVYTFGQGNQGQLGLGSSM 278

Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDNFSNPVDQ 515
           +    P  +      +   VS G+S    ++++  +Y +G    G+   G + FSN   +
Sbjct: 279 METEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTF-K 337

Query: 516 PSKVVGLEDVCVRQICAG 533
           P KV    +  V+ +  G
Sbjct: 338 PEKVKRFNNFTVKMVTCG 355



 Score =  112 bits (281), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 73/220 (33%), Positives = 115/220 (52%), Gaps = 7/220 (3%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGE 381
           V  +S G  HSA VT +G LYT+G  D G+LGHG+ KS   P++V +L    V  V+CG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           +HT+  ++ GH ++S G G  G+LGH D      PK+IE L   + + +  G+ FS A+T
Sbjct: 97  NHTIAATESGH-LYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAIT 155

Query: 442 WDGLVFWWG-LGLRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEVYAWGSN 499
            +G ++ WG  G   + +   T +  T L  H ++  VS G  H+  +++   +Y  G  
Sbjct: 156 ENGELYTWGSCGEGQNGLGEDTEI-PTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMCGEK 214

Query: 500 TMGQCGQDNFS-NPVDQPSKVVGLEDVCVRQICAGSLFSI 538
             G+ G D+   +   Q  K+  +ED  V   C     ++
Sbjct: 215 EGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAV 254



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 92/324 (28%), Positives = 145/324 (44%), Gaps = 33/324 (10%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL--QSLPSNIRHIEAGQFCTFLLDSTGGL 240
           +  A+ K+YT+GCN   Q+        ++P +  +  P  +  +  G+  T     +G L
Sbjct: 49  VVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHL 108

Query: 241 LVY---GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK-----CSEAHVLTVTSEGEVYS 292
             +   G G LG  +     +PK       I  L V K     C       +T  GE+Y+
Sbjct: 109 YSFGCGGDGQLGHGDAEDSHVPK------IIEGLDVQKYKHLACGSDFSAAITENGELYT 162

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           WG    G+ G G   ++   +L + G    +V  VS G+ H A VTEDG LY  GE + G
Sbjct: 163 WGSCGEGQNGLGED-TEIPTRLHLHG----KVRMVSCGYYHMAVVTEDGSLYMCGEKEGG 217

Query: 353 RLG--HGDLKSRHTPTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           +LG  H  L +      +  + D V   +CG   T V++++G +V++ G GN G+LG   
Sbjct: 218 KLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNG-SVYTFGQGNQGQLGLGS 276

Query: 410 TGKVTT-PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS-FH 461
           +   T  P+ I    K + R V  G SF+  +T  G ++ +G      LGL     S   
Sbjct: 277 SMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTF 336

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVL 485
            P  V   ++  +  V+ G  H+L
Sbjct: 337 KPEKVKRFNNFTVKMVTCGGCHML 360



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 18/245 (7%)

Query: 155 GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA---HSKVYTWG-CNLHHQILDEVRGKCS 210
           GD + S+    I+     K  +    +D S A   + ++YTWG C      L E      
Sbjct: 122 GDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGE---DTE 178

Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
            P    L   +R +  G +   ++   G L + G+   G LGL +  +    +   +++ 
Sbjct: 179 IPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSI 238

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR-PKLIMGGLYGK-RVT 325
              + V+ C       VT  G VY++G G  G+LG G+++ +   P+ I   L+ K +  
Sbjct: 239 EDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERI--PLFEKVKAR 296

Query: 326 QVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD--LKSRHTPTLVTELSD--VGAVSCGE 381
            VS G S +A +T+ G LYT+G+G HG+LG GD    +   P  V   ++  V  V+CG 
Sbjct: 297 TVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGG 356

Query: 382 SHTLV 386
            H LV
Sbjct: 357 CHMLV 361


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +  L+D+    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ V  L +  +V +S GD+H   L+Q  +V+ +G N  GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 42/329 (12%)

Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R   Q   LP  I+ +E         G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   VGA        +SCG++HT VL+QDG  V++ G    G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H   L     
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFD 333

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S+   VDV +   H+ A +  N V
Sbjct: 334 ISCLISAEDFVDVQV--KHIFAGTYANFV 360



 Score = 90.9 bits (224), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           + WG            L +RR      G  G  + Q ++G  HS  +  +  + + G+  
Sbjct: 3   FCWG-------ADSRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +    P  +  L    V  VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++ TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      + PV  ++P  V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVVYISCG 244



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +  L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 60.5 bits (145), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 37/236 (15%)

Query: 171 TPKLTYNIGDTDI---SVAH---------SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQS 216
           TPK    + D  I   S  H         S+V++WG N H Q  +  E   + S  R++S
Sbjct: 118 TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS 177

Query: 217 LPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE-AAIVSL 271
           L    +  + AG   +F L   G    +G    G L L+   + P+    PL   A+ +L
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV-PVQSNKPLSVGALKNL 236

Query: 272 SVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQV 327
            V    C +AH   +T +G+V+++G    G+LG+  T  +R P+L+  + GL    V+Q+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL----VSQI 292

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGE 381
             G  H+       L Y    G     GHG  D      P  +TE  D+  +   E
Sbjct: 293 DCGSYHT-------LAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAE 341


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 152/347 (43%), Gaps = 19/347 (5%)

Query: 190 VYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           ++ WG  +H ++    +++      R       + I+ I  G+  T ++   G +   G 
Sbjct: 28  MFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGN 87

Query: 246 GWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG-H 303
              G L +   +   + +P   A V    + C   H L +   G+++SWG    G+LG +
Sbjct: 88  NDYGQLGHEKGRKRLQLIPGLDAFV-FKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLN 146

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSR 362
                +  P+++   L    V Q++ G  H+ A+T +G LY+WG    G+LG G D K  
Sbjct: 147 SKNFMESSPRMVKT-LGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYE 205

Query: 363 HTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             P  ++    +    ++CG  H++ +S+ G  V+  G    G+LG  DT     P  ++
Sbjct: 206 IKPKFISAFIGIPIAFIACGGYHSIAISKSG-AVFGWGKNTFGQLGLNDTQDRNLPCQLQ 264

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIV 475
            L+  ++     G  FSV LT DG VF  G G+       S+ +   P  V  L    + 
Sbjct: 265 TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVT 324

Query: 476 DVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
            +S G  H LAL      VYAWG    GQ G  + +  V  P  V G
Sbjct: 325 QISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHS-TRSVTTPQVVHG 370



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 24/298 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLLVY 243
            ++Y+ G N + Q+  E      R RLQ +P       +    G + T  ++  G L  +
Sbjct: 80  GEIYSCGNNDYGQLGHEK----GRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 244 G---KGWLGL-ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G   +G LGL +   ++  P+ V      V + ++ C   H   +T+ GE+YSWG    G
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIA-CGMKHAFALTNNGELYSWGSNSEG 194

Query: 300 KLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
           +LG G +T  + +PK I     G  +  ++ G  HS A+++ G ++ WG+   G+LG  D
Sbjct: 195 QLGLGTDTKYEIKPKFI-SAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLND 253

Query: 359 LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
            + R+ P  +  L +  +   +CGE  ++ L+ DG  V++ G+G  G+LGH        P
Sbjct: 254 TQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDG-GVFTCGAGMYGQLGHGSNSNEILP 312

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWGLGLRS-----SSISFHTPVLVTG 468
           + +  L    V ++  G   ++AL    G V+ WGLG        S+ S  TP +V G
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHG 370



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 23/295 (7%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           +P+ +  + A   +    C E + + +T  GE+YS G  ++G+LGH     ++R +LI  
Sbjct: 51  IPRELDFKKA-AEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEK--GRKRLQLI-P 106

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH----TPTLVTEL-- 371
           GL      + + G  H+ A+ E G L++WG    G+LG   L S++    +P +V  L  
Sbjct: 107 GLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLG---LNSKNFMESSPRMVKTLGT 163

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKV 430
           S V  ++CG  H   L+ +G  ++S GS + G+LG   DT     PK I A     +  +
Sbjct: 164 SVVVQIACGMKHAFALTNNGE-LYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFI 222

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
             G   S+A++  G VF WG      LGL  +    + P  +  L + +I   + G+   
Sbjct: 223 ACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQ-DRNLPCQLQTLQNAKICYAACGEEFS 281

Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           + L+    V+  G+   GQ G  + SN +  P +V+ L    V QI  G   ++A
Sbjct: 282 VFLTVDGGVFTCGAGMYGQLGHGSNSNEI-LPRQVMELMGSTVTQISCGKRHTLA 335



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 22/268 (8%)

Query: 289 EVYSWGVGEHGKLGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +++ WG   HG+LG G     N L  R             + Q++ G +++  +T+ G +
Sbjct: 27  DMFCWGSTIHGELGLGGIEDENILIPRELDFKKAA----EIQQIACGENYTVVITQIGEI 82

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGN 401
           Y+ G  D+G+LGH   K R    L+  L        +CG  HTL +++ G  ++S GS  
Sbjct: 83  YSCGNNDYGQLGHE--KGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQ-LFSWGSNT 139

Query: 402 LGKLGHEDTGKV-TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLR 454
            G+LG      + ++P++++ L    V ++  G   + ALT +G ++ WG      LGL 
Sbjct: 140 EGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 455 SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
           + +     P  ++      I  ++ G  H +A+S+   V+ WG NT GQ G ++ +   +
Sbjct: 200 TDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLND-TQDRN 258

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            P ++  L++  +     G  FS+  TV
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTV 286


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 133/242 (54%), Gaps = 18/242 (7%)

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           +H + +  +G V++WG   +G+LG+    S ++ P  +    +   V QV AG + + A+
Sbjct: 93  SHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPHHVK---WLSDVKQVRAGENFTLAL 149

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSM 397
            EDG ++ +G+   G+LG G  ++R  P  V+ L+D+ A+  GE  +L LS+DG TVW+ 
Sbjct: 150 KEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDG-TVWAW 208

Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-----LG 452
           G+ ++G+LG+    K   P  +  L    V  +  G     A+T +G V+ WG     LG
Sbjct: 209 GNNSVGQLGNGTREKALQPVQVSELTD--VIAISTGEKQGYAVTSNGDVYGWGYNQGKLG 266

Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
              ++ S ++PVL+ G+  + ++ V  G  H LAL +   V+AWG+NT GQ G   +  P
Sbjct: 267 -DGTNKSRNSPVLIDGI--YDVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLG---YGTP 320

Query: 513 VD 514
           V+
Sbjct: 321 VN 322



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 19/312 (6%)

Query: 205 VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVP 263
           V+GK + P      S++  ++ G   T  L   G +  +G    G L N   +   K   
Sbjct: 69  VKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKSTEKTPH 128

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               +  +   +  E   L +  +G V+++G    G+LG G T ++ +P  + G      
Sbjct: 129 HVKWLSDVKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTETRVKPVQVSGLT---D 185

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESH 383
           +  + AG   S A++EDG ++ WG    G+LG+G  +    P  V+EL+DV A+S GE  
Sbjct: 186 IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREKALQPVQVSELTDVIAISTGEKQ 245

Query: 384 TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
              ++ +G  V+  G  N GKLG        +P +I+ +  + V  V +G   ++AL  D
Sbjct: 246 GYAVTSNGD-VYGWGY-NQGKLGDGTNKSRNSPVLIDGI--YDVIAVDSGKQHTLALKED 301

Query: 444 GLVFWWGLGLRSSSISFHTPV----------LVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           G V+ WG       + + TPV          L +    +QIV +  G  H  A+ +   V
Sbjct: 302 GTVWAWGTNTHGQ-LGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIKKDGTV 360

Query: 494 YAWGSNTMGQCG 505
           ++WG N+ G+ G
Sbjct: 361 WSWGFNSNGELG 372



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 13/243 (5%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+ +G N   Q+ D       +P   S  ++I  I+AG+  +  L   G +  +G   +G
Sbjct: 155 VWAFGKNRSGQLGDGTTETRVKPVQVSGLTDIVAIDAGEEFSLALSEDGTVWAWGNNSVG 214

Query: 250 -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            L N T +   + V +      +++S   E     VTS G+VY WG    GKLG G   S
Sbjct: 215 QLGNGTREKALQPVQVSELTDVIAIS-TGEKQGYAVTSNGDVYGWGY-NQGKLGDGTNKS 272

Query: 309 QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTL 367
           +  P LI  G+Y   V  V +G  H+ A+ EDG ++ WG   HG+LG+G  +    TP  
Sbjct: 273 RNSPVLI-DGIY--DVIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQ 329

Query: 368 V----TE-LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           V    TE L+ + A+  G  H+  + +DG TVWS G  + G+LG   + K   P  IE +
Sbjct: 330 VFLESTEPLNQIVAIDAGGFHSHAIKKDG-TVWSWGFNSNGELGLGHSKKQMYPAKIETI 388

Query: 423 RKF 425
             F
Sbjct: 389 NLF 391



 Score = 42.0 bits (97), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           L SSS+   T  PV V  LS   +VD   G SH +AL +   V+ WG +  G+ G +   
Sbjct: 64  LGSSSVKGKTTSPVPVDDLSDVLMVDT--GTSHTVALQKDGTVWTWGWSAYGELGNEKAK 121

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +    P  V  L D  V+Q+ AG  F++A
Sbjct: 122 STEKTPHHVKWLSD--VKQVRAGENFTLA 148


>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
 gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
           SB210]
          Length = 1146

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 152/312 (48%), Gaps = 35/312 (11%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPK--RVPLEAAIVSLSVSK 275
           I+ I   Q  +  + + G L V G    G LGL   T+  + K   +P+   I  L V+ 
Sbjct: 580 IKQISTSQNHSACISANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVA- 638

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C + H L +T   +VYSWG   H K+G  +     +P  I   L  K V QV  G  HSA
Sbjct: 639 CGDYHTLALTDTDQVYSWGGTLHKKVGQRSG----KPAPIQQ-LNKKGVIQVDCGDYHSA 693

Query: 336 AVTEDGLLYTWGEG----DHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHTLVLSQ 389
           A+T++G +YTWG G    + G+LG G +K    P  +   E   +  VSCG+ HT+ L+ 
Sbjct: 694 AITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTS 753

Query: 390 DGHTVWSMGSGNLGKLG---HEDTG---KVTTPKV----IEALRKFRVRKVCAGTSFSVA 439
           + + ++  G+G  G+LG   HE T    KV   +        L +  ++ +  G   ++ 
Sbjct: 754 E-NELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLL 812

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           LT +G ++  G      LGLR+S        LV  L+  +I+ ++ G +H LALS  N++
Sbjct: 813 LTNNGYIYSSGYGRQGQLGLRNSENQCEFQ-LVWTLTKKKIIKIAAGWNHSLALSDQNDI 871

Query: 494 YAWGSNTMGQCG 505
           +A G    GQ G
Sbjct: 872 FACGHGARGQLG 883



 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 45/335 (13%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLL 241
           A+ ++Y  G  LH ++  E     +  + Q +P      +  +  G + T  L  T  + 
Sbjct: 595 ANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTLALTDTDQVY 654

Query: 242 VYGKGWL--GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG--- 296
            +G G L   +   + +P P +   +  ++ +    C + H   +T  G++Y+WG G   
Sbjct: 655 SWG-GTLHKKVGQRSGKPAPIQQLNKKGVIQVD---CGDYHSAAITQNGDIYTWGGGGQD 710

Query: 297 -EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              G+LG G+      P+  +    GK++ +VS G  H+ A+T +  L+ WG G+ G LG
Sbjct: 711 YNKGQLGLGHVKDIENPEK-LKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGEFGELG 769

Query: 356 HGDLKSRHTPTLVTE--------------LSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
               K  +TP  V                 + +  + CG  HTL+L+ +G+ ++S G G 
Sbjct: 770 TS--KHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGY-IYSSGYGR 826

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR------- 454
            G+LG  ++      +++  L K ++ K+ AG + S+AL+    +F  G G R       
Sbjct: 827 QGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGWNHSLALSDQNDIFACGHGARGQLGLGD 886

Query: 455 --SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
             S +I  H    V  L       +S G  H  A+
Sbjct: 887 EESRTIFTH----VVSLGGKNTATISAGGDHSWAV 917



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 44/254 (17%)

Query: 282 LTVTSEGE-------VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK----------RV 324
           + V +EG+       +++WG  E G+L  GN   Q++P       Y K           +
Sbjct: 530 VNVQNEGQGNSIKCYIFAWGKNESGELSFGN---QKQP------FYNKPENPKNLDRIYI 580

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL----VTELSDVGAVSCG 380
            Q+S   +HSA ++ +G LY  G   HG+LG  +L   +        + +   V  V+CG
Sbjct: 581 KQISTSQNHSACISANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACG 640

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
           + HTL L+ D   V+S G G L K   + +GK   P  I+ L K  V +V  G   S A+
Sbjct: 641 DYHTLALT-DTDQVYSWG-GTLHKKVGQRSGK---PAPIQQLNKKGVIQVDCGDYHSAAI 695

Query: 441 TWDGLVFWWGLGLRSSSI---------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           T +G ++ WG G +  +              P  +      +IV VS G  H +AL+  N
Sbjct: 696 TQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSEN 755

Query: 492 EVYAWGSNTMGQCG 505
           E++ WG+   G+ G
Sbjct: 756 ELFGWGAGEFGELG 769



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 27/260 (10%)

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY-GKRVTQVSAGHSHSA 335
           S+ H   +++ GE+Y  G   HGKLG          K  M  ++ G +V QV+ G  H+ 
Sbjct: 586 SQNHSACISANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGIKVLQVACGDYHTL 645

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHT 393
           A+T+   +Y+WG   H ++G    K    P  + +L+  G   V CG+ H+  ++Q+G  
Sbjct: 646 ALTDTDQVYSWGGTLHKKVGQRSGK----PAPIQQLNKKGVIQVDCGDYHSAAITQNG-D 700

Query: 394 VWSMGSG----NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           +++ G G    N G+LG      +  P+ ++     ++ KV  G   ++ALT +  +F W
Sbjct: 701 IYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSENELFGW 760

Query: 450 G---LGLRSSSISFHTPVLVTG------------LSSHQIVDVSIGDSHVLALSQYNEVY 494
           G    G   +S   +TP+ V              L  + I ++  G  H L L+    +Y
Sbjct: 761 GAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIY 820

Query: 495 AWGSNTMGQCGQDNFSNPVD 514
           + G    GQ G  N  N  +
Sbjct: 821 SSGYGRQGQLGLRNSENQCE 840


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 131/261 (50%), Gaps = 15/261 (5%)

Query: 288 GEVYSWGVGEHGKLGHGNT---LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
           G ++++G G+  +LGHG+T    +Q  P+ +     G  V   S    H AAVTEDG ++
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNL 402
           TWG G  GRLGH ++     P  V  L  +    V+CG  HTL L+ DG  V++ G+   
Sbjct: 126 TWGRGTFGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGR-VFAWGNNKT 183

Query: 403 GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
           G +G  D G    P+ IE+LR  ++  + AG   S AL+ +  V+ WG      LGL   
Sbjct: 184 GCVGVSDRG-TCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQG 242

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           +     P  +  L +  IV ++ G  H+LALS   EVYAWG    GQ   +   +  + P
Sbjct: 243 ARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKVD-TNIP 301

Query: 517 SKVVGLEDVCVRQICAGSLFS 537
             +  L++  V+ I AG   S
Sbjct: 302 HVIDALKESRVKMIAAGGSHS 322



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 27/303 (8%)

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           G +Y+WG G+ G+LG G    +  P+ I   +  +  T  +AG + +AA+T+ G+L+T+G
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQ-IAKEIDNEICTFTAAGANTTAAITQGGVLWTFG 72

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD----VGAVSCG--ESHTLVLSQDGHTVWSMGSGN 401
           +GD  +LGHGD        L  E+ D    +  V+C   + H   +++DG +VW+ G G 
Sbjct: 73  QGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDG-SVWTWGRGT 131

Query: 402 LGKLGHE--DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL 453
            G+LGHE  +TG    P+ +  L   R  KV  G   ++ALT DG VF WG      +G+
Sbjct: 132 FGRLGHEVHETG---IPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVGV 188

Query: 454 RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV 513
                    P  +  L   +I+D+S G     ALS  +EVY WG++  GQ G    +  +
Sbjct: 189 SDRGTC--APQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARYI 246

Query: 514 DQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVR------PHTFTL 567
            QP+++  L +V + QI  G    +A +      A          + +      PH    
Sbjct: 247 SQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKVDTNIPHVIDA 306

Query: 568 IRE 570
           ++E
Sbjct: 307 LKE 309



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 17/219 (7%)

Query: 238 GGLLVYGKGWLGLANTTIQP--LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
           G +  +G+G  G     +    +P++VP    +  + V+ C   H L +T +G V++WG 
Sbjct: 122 GSVWTWGRGTFGRLGHEVHETGIPEKVPGLDGMRFVKVA-CGHVHTLALTDDGRVFAWGN 180

Query: 296 GEHGKLGHGNTLSQR---RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
            + G +G    +S R    P+ I   L GK++  +SAG   SAA++ +  +YTWG  ++G
Sbjct: 181 NKTGCVG----VSDRGTCAPQEIES-LRGKKIIDISAGMESSAALSAEHEVYTWGADNYG 235

Query: 353 RLGHGDLKSRH--TPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
           +LG G   +R+   PT +  L +V  V  +CG+ H L LS  G  V++ G G  G+  +E
Sbjct: 236 QLGLGQ-GARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGE-VYAWGQGLQGQTANE 293

Query: 409 DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
                  P VI+AL++ RV+ + AG S S  +   G +F
Sbjct: 294 KKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLF 332



 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSL-PSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
            +V+ WG N    +    RG C+   ++SL    I  I AG   +  L +   +  +G  
Sbjct: 173 GRVFAWGNNKTGCVGVSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGAD 232

Query: 246 --GWLGL---ANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
             G LGL   A    QP   R      IV ++   C + H+L +++ GEVY+WG G  G+
Sbjct: 233 NYGQLGLGQGARYISQPTRIRTLRNVPIVQIA---CGQYHMLALSAAGEVYAWGQGLQGQ 289

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
             +   +    P +I   L   RV  ++AG SHSA V + G L+T GE
Sbjct: 290 TANEKKVDTNIPHVIDA-LKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336


>gi|374582676|ref|ZP_09655770.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus youngiae DSM 17734]
 gi|374418758|gb|EHQ91193.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Desulfosporosinus youngiae DSM 17734]
          Length = 747

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 145/304 (47%), Gaps = 36/304 (11%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT-LSQRRPKLIMGGLY 320
            P++    SLS       H LT++S+G V++WG    G+LG+  + L      +    L 
Sbjct: 39  APVQTRGASLSTVSAGMFHSLTLSSDGTVWAWGDNSEGQLGNNQSELPDSSTPVQASDL- 97

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK---------------SRHTP 365
              V  V+AG +HS A+  DG ++ WG  + G+ G G ++                 +TP
Sbjct: 98  -TNVVAVAAGGAHSLALKNDGTVWGWGNNEFGQAGFGKIELIAGGPDFYMPEQYLKSYTP 156

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT---PKVI--- 419
             V  L+DV A++ G  ++L L  DG T+WS GS   G+LG+     + T    KV+   
Sbjct: 157 LQVQGLTDVIAIAAGMDYSLALKADG-TIWSWGSSQNGQLGNPSGKGLFTNIPAKVVVDT 215

Query: 420 --EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDV 477
             +AL    + K+ AG++F++AL  DG V+ WG GL       H  V    +  H + DV
Sbjct: 216 NGQALTG--ITKISAGSAFALALKDDGTVWTWG-GLLVDEEGVHN-VTSAAIQVHSLTDV 271

Query: 478 ---SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGS 534
              S G +H LAL     V+ WG N + Q G  +     + P ++ G+ +  V  I AGS
Sbjct: 272 INISAGYNHSLALKSDGTVWGWGKNDLFQLGDRDTQQSWNTPLQISGINN--VHSIVAGS 329

Query: 535 LFSI 538
             S+
Sbjct: 330 YLSL 333



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 156/362 (43%), Gaps = 51/362 (14%)

Query: 190 VYTWGCNLHHQILDEVRG--KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG N   Q+ +        S P   S  +N+  + AG   +  L + G +  +G   
Sbjct: 67  VWAWGDNSEGQLGNNQSELPDSSTPVQASDLTNVVAVAAGGAHSLALKNDGTVWGWGNNE 126

Query: 248 LGLANTTI--------------QPLPKRVPLEA-AIVSLSVSKCSEAHVLTVTSEGEVYS 292
            G A                  Q L    PL+   +  +        + L + ++G ++S
Sbjct: 127 FGQAGFGKIELIAGGPDFYMPEQYLKSYTPLQVQGLTDVIAIAAGMDYSLALKADGTIWS 186

Query: 293 WGVGEHGKLGH--GNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYTWG 347
           WG  ++G+LG+  G  L    P  ++    G+    +T++SAG + + A+ +DG ++TWG
Sbjct: 187 WGSSQNGQLGNPSGKGLFTNIPAKVVVDTNGQALTGITKISAGSAFALALKDDGTVWTWG 246

Query: 348 ------EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGN 401
                 EG H                V  L+DV  +S G +H+L L  DG TVW  G  +
Sbjct: 247 GLLVDEEGVH--------NVTSAAIQVHSLTDVINISAGYNHSLALKSDG-TVWGWGKND 297

Query: 402 LGKLGHEDTGKV-TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---LGLRSSS 457
           L +LG  DT +   TP  I  +    V  + AG+  S+ L  DG V+ WG    G    +
Sbjct: 298 LFQLGDRDTQQSWNTPLQISGIN--NVHSIVAGSYLSLVLKTDGTVWSWGGNLWGQLGDA 355

Query: 458 ISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
           + F        PV V  L++   +   +G   V+A      ++AWG+N+ GQ G + F  
Sbjct: 356 VPFEQEPLSMNPVQVNELTNATALASGLG--FVIARQSGGTIWAWGANSEGQLGNNTFGG 413

Query: 512 PV 513
           PV
Sbjct: 414 PV 415


>gi|408501717|ref|YP_006865636.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408466541|gb|AFU72070.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1828

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 41/323 (12%)

Query: 218  PSNIRHIEA--GQFCTFLLDSTGGLLVYGK---GWLGLA-NTTIQPLPKRVPLEAAI--- 268
            P  +R  +A  G++ T  + S G +  +G    G LG + N+     P R+    AI   
Sbjct: 775  PRAVRFAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDAIKGK 834

Query: 269  VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
            + ++VS   +A+ + + S+G VY+WG    G+LG+G T S    + +       ++T +S
Sbjct: 835  IFIAVS-AGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSS-EPVKAQTDNAKITAIS 892

Query: 329  AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLS 388
            AG +++ A+  DG +YTWG+   G+LG G+  S  TPT VT LS++ A+S G +    L 
Sbjct: 893  AGRAYAMALASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTALSNITAISAGFTSGTALD 952

Query: 389  QDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL------RKFRVRKVCAGTSFSVALTW 442
              GH  W+ G  + G+LG+    +  TP  ++ L       +F +  + AG    +AL  
Sbjct: 953  SQGH-AWTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYI-AISAGYQHVLALDT 1010

Query: 443  DGLVFWWGLGLR-------------SSSISF-HTPVLVTGLSSHQIVDVSIGDSHVLALS 488
            D  ++ WG G               S++ISF   PV +T +S+        GD    A+ 
Sbjct: 1011 DHDLYGWGSGTAIGSTTDTNVSKRGSTAISFGDEPVNITAISA--------GDDGSEAID 1062

Query: 489  QYNEVYAWGSNTMGQCGQDNFSN 511
               ++Y WG    GQ G   + N
Sbjct: 1063 DSGKIYTWGKEAYGQLGNGVYDN 1085



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 150/356 (42%), Gaps = 46/356 (12%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNI------RHIEAGQFCTFLLDSTGGLLVY 243
             Y WG N   Q+ +  +     P     PS+         + AG   +  L S G    +
Sbjct: 1347 AYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFAYTQVSAGYGFSLALGSDGNAYAW 1406

Query: 244  G--------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYSW 293
            G        KG  G  NTT  P+  + P   A    + ++ S    H L V  + + Y+W
Sbjct: 1407 GDNGRGQLGKGAAGGTNTT--PVQVKKP-SGAGTDFAYTQVSAGGYHSLAVGKDHQAYAW 1463

Query: 294  G-VGEHGKLGHGNTLSQRRPKLIMGGLY---GKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            G     G++G GNT       + +       G +V QVSAG+ HS  +   G  Y WG G
Sbjct: 1464 GDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGYG 1523

Query: 350  DHGRLGHGDLKSRHTPTLVT-----ELSDVG----AVSCGESHTLVLSQDGHTVWSMGSG 400
            D GRLG+    S+ TP  V+     E   +G     VS G SH+L + +DG   ++ G+ 
Sbjct: 1524 DSGRLGNNAKSSQATPVSVSSPVKYEDGSIGFFATQVSAGGSHSLAIGRDGK-AYAWGAN 1582

Query: 401  NLGKLGHEDTGKVTTPKVIE----ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------ 450
              G+LG  DT     P ++         F+  ++ AG  F   +   G ++ WG      
Sbjct: 1583 TDGRLGTGDTNDAAIPTLVANPDGGSDGFKPTEISAGGWFCAGIDDKGKIYTWGSNGHNA 1642

Query: 451  LGLRSSSISF-HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            LG  S S S   +PVLV+   S     +S G+  VL +   +  Y WG N+  Q G
Sbjct: 1643 LGNVSISGSISESPVLVSKDGS--TTQISAGERQVLVIDSNDMAYGWGDNSSRQLG 1696



 Score =  103 bits (258), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 144/316 (45%), Gaps = 43/316 (13%)

Query: 254  TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
            TI P P +  +  A VS       + H L V S+G  Y+WG    G+LG+G+  S + P 
Sbjct: 1317 TITP-PSQRGIRFAQVS-----TGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPV 1370

Query: 314  LI-----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT-PTL 367
             +      G  +    TQVSAG+  S A+  DG  Y WG+   G+LG G     +T P  
Sbjct: 1371 QVKKPSDAGTDF--AYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQ 1428

Query: 368  VTELSDVGA------VSCGESHTLVLSQDGHTVWSMGS-GNLGKLGHEDT-GKVTTPKVI 419
            V + S  G       VS G  H+L + +D H  ++ G   N G++G  +T G    P  +
Sbjct: 1429 VKKPSGAGTDFAYTQVSAGGYHSLAVGKD-HQAYAWGDRSNGGQVGDGNTTGNAPAPVAV 1487

Query: 420  EALR---KFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSS 471
             A      F+VR+V AG   S+ +   G  + WG G       ++  S  TPV V+    
Sbjct: 1488 NASATSPGFQVRQVSAGYQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPVK 1547

Query: 472  HQ-------IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV---- 520
            ++          VS G SH LA+ +  + YAWG+NT G+ G  + +N    P+ V     
Sbjct: 1548 YEDGSIGFFATQVSAGGSHSLAIGRDGKAYAWGANTDGRLGTGD-TNDAAIPTLVANPDG 1606

Query: 521  GLEDVCVRQICAGSLF 536
            G +     +I AG  F
Sbjct: 1607 GSDGFKPTEISAGGWF 1622



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 131/304 (43%), Gaps = 39/304 (12%)

Query: 215 QSLPSNIRHIEAGQFCTFLL--DSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLS 272
           QSL ++   +   Q+ T  +  D TGG  +           T+ P PK   +  A VS  
Sbjct: 179 QSLTAHWSSVNDAQWTTADVSGDDTGGSAI-----------TLTP-PKPRGVRFAQVS-- 224

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG--GLYGKRVTQVSAG 330
                  H L V S+G VY+WG    G+LG   T+++  P  I     + GK    VSAG
Sbjct: 225 ---AGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTPVRITENEAIKGKTFISVSAG 281

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
            + S A+  DG +YTWG+   G LG+G   +   P      + + A+S G  H + LS  
Sbjct: 282 TTFSMALASDGTVYTWGDNSRGELGNGSTTNSSVPVKANLNATITAISAGYWHAMALSSS 341

Query: 391 GHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           G T+++ G    G+LG+  TG  V       +        + AG  F  AL   G  + W
Sbjct: 342 G-TIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQGHAYAW 400

Query: 450 G-----------LGLRSSSISFHTPVLVTGLSSHQ-----IVDVSIGDSHVLALSQYNEV 493
           G           +   SS  + +TP  + G S+         D+  G  HVLALS   +V
Sbjct: 401 GRNQGGQLSIGTMDGTSSGSNVYTPSRIYGDSTGNPDSTVYTDIDAGYLHVLALSNSGKV 460

Query: 494 YAWG 497
           Y WG
Sbjct: 461 YYWG 464



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 136/290 (46%), Gaps = 24/290 (8%)

Query: 262  VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIM--GG 318
             P +   V  + +     H L V S+G VY+WG    G LG+  N+ +   P  I     
Sbjct: 771  TPPKPRAVRFAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATTPVRITENDA 830

Query: 319  LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV--TELSDVGA 376
            + GK    VSAG ++S A+  DG +YTWG    G+LG+G   S  +  +   T+ + + A
Sbjct: 831  IKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSEPVKAQTDNAKITA 890

Query: 377  VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            +S G ++ + L+ DG TV++ G    G+LG  +    +TP  + AL    +  + AG + 
Sbjct: 891  ISAGRAYAMALASDG-TVYTWGDNTQGQLGIGNYDSHSTPTKVTALS--NITAISAGFTS 947

Query: 437  SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ-----IVDVSIGDSHVL 485
              AL   G  + WG      LG  + + S  TP  V  L + Q      + +S G  HVL
Sbjct: 948  GTALDSQGHAWTWGQNDKGQLGNGAPNRS-PTPTRVQDLDTGQPDTRFYIAISAGYQHVL 1006

Query: 486  ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV--GLEDVCVRQICAG 533
            AL   +++Y WGS T    G    +N   + S  +  G E V +  I AG
Sbjct: 1007 ALDTDHDLYGWGSGTA--IGSTTDTNVSKRGSTAISFGDEPVNITAISAG 1054



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 113/230 (49%), Gaps = 24/230 (10%)

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHT 364
           TL+  +P+ +       R  Q SAG  H+ AV  DG +Y WG    G LG+  +  +  T
Sbjct: 769 TLTPPKPRAV-------RFAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNSGTATT 821

Query: 365 PTLVTELSDVG-----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
           P  +TE   +      AVS G+++++ L+ DG TV++ G+   G+LG+  TG  ++  V 
Sbjct: 822 PVRITENDAIKGKIFIAVSAGDAYSMALASDG-TVYTWGNNGKGQLGNGTTGSYSSEPVK 880

Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQ 473
                 ++  + AG ++++AL  DG V+ WG      LG+ +   S  TP  VT LS   
Sbjct: 881 AQTDNAKITAISAGRAYAMALASDGTVYTWGDNTQGQLGIGNYD-SHSTPTKVTALS--N 937

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
           I  +S G +   AL      + WG N  GQ G +   N    P++V  L+
Sbjct: 938 ITAISAGFTSGTALDSQGHAWTWGQNDKGQLG-NGAPNRSPTPTRVQDLD 986



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 107/248 (43%), Gaps = 32/248 (12%)

Query: 321  GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA---- 376
            G R  QVS G +HS AV  DG  Y WG+   G+LG+G   S  TP  V + SD G     
Sbjct: 1325 GIRFAQVSTGKNHSLAVGSDGNAYAWGDNSTGQLGNGSKDSSKTPVQVKKPSDAGTDFAY 1384

Query: 377  --VSCGESHTLVLSQDGHT-VWS-MGSGNLGK--LGHEDTGKVTTPKVIEALRKFRVRKV 430
              VS G   +L L  DG+   W   G G LGK   G  +T  V   K   A   F   +V
Sbjct: 1385 TQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAAGGTNTTPVQVKKPSGAGTDFAYTQV 1444

Query: 431  CAGTSFSVALTWDGLVFWWG-------LGLRSSSISFHTPVLVTGLSSH---QIVDVSIG 480
             AG   S+A+  D   + WG       +G  +++ +   PV V   ++    Q+  VS G
Sbjct: 1445 SAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGNTTGNAPAPVAVNASATSPGFQVRQVSAG 1504

Query: 481  DSHVLALSQYNEVYAWGSNTMGQCGQD---------NFSNPVDQPSKVVGLEDVCVRQIC 531
              H L +    + YAWG    G+ G +         + S+PV      +G       Q+ 
Sbjct: 1505 YQHSLIIGISGQTYAWGYGDSGRLGNNAKSSQATPVSVSSPVKYEDGSIGF---FATQVS 1561

Query: 532  AGSLFSIA 539
            AG   S+A
Sbjct: 1562 AGGSHSLA 1569



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 28/233 (12%)

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           TL+  +P+       G R  QVSAGH H+ AV  DG +Y WG+   G LG     +++TP
Sbjct: 209 TLTPPKPR-------GVRFAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTP 261

Query: 366 TLVTELSDVG-----AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
             +TE   +      +VS G + ++ L+ DG TV++ G  + G+LG+  T   + P  ++
Sbjct: 262 VRITENEAIKGKTFISVSAGTTFSMALASDG-TVYTWGDNSRGELGNGSTTNSSVP--VK 318

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
           A     +  + AG   ++AL+  G ++ WG      LG   + ++ +        S    
Sbjct: 319 ANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTF 378

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQC------GQDNFSNPVDQPSKVVG 521
             +S G     AL      YAWG N  GQ       G  + SN V  PS++ G
Sbjct: 379 TTISAGYDFQTALDSQGHAYAWGRNQGGQLSIGTMDGTSSGSN-VYTPSRIYG 430



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 155/353 (43%), Gaps = 43/353 (12%)

Query: 218 PSNIR--HIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVS-- 270
           P  +R   + AG   T  + S G +  +G   KG LG + T  +  P R+    AI    
Sbjct: 215 PRGVRFAQVSAGHDHTLAVGSDGHVYAWGDNSKGELGDSTTINKNTPVRITENEAIKGKT 274

Query: 271 -LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSA 329
            +SVS       + + S+G VY+WG    G+LG+G+T +   P  +   L    +T +SA
Sbjct: 275 FISVS-AGTTFSMALASDGTVYTWGDNSRGELGNGSTTNSSVP--VKANL-NATITAISA 330

Query: 330 GHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELS-DVGAVSCGESHTLV 386
           G+ H+ A++  G +YTWG+ ++G+LG+G   +    +P  V+        +S G      
Sbjct: 331 GYWHAMALSSSGTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTA 390

Query: 387 LSQDGHT-VWSMGSG---NLGKLGHEDTG-KVTTPKVIEALRKFR-----VRKVCAGTSF 436
           L   GH   W    G   ++G +    +G  V TP  I               + AG   
Sbjct: 391 LDSQGHAYAWGRNQGGQLSIGTMDGTSSGSNVYTPSRIYGDSTGNPDSTVYTDIDAGYLH 450

Query: 437 SVALTWDGLVFWWGL----GLRSSSISFHT--PVLV---TGLSSHQIVDVSIGDSHVLAL 487
            +AL+  G V++WG     G   ++ S H+  P LV   TG ++   V  S GD     +
Sbjct: 451 VLALSNSGKVYYWGYPLTKGDDPNADSVHSFYPSLVSLPTGAATP--VSASAGDYSSAVV 508

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV------VGLEDVCVRQICAGS 534
                +Y +GSN+ GQ G D  + P    ++V      V   DVC   +  GS
Sbjct: 509 DSAGSLYMFGSNSSGQLG-DGTTKPKSTMTEVSLTGVTVAAFDVCRHSLAIGS 560



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 40/318 (12%)

Query: 249  GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAH--VLTVTSEGEVYSWGVGEHGKLGHG-- 304
            G  +++  P+  + P +A     + ++ S  +   L + S+G  Y+WG    G+LG G  
Sbjct: 1361 GSKDSSKTPVQVKKPSDAG-TDFAYTQVSAGYGFSLALGSDGNAYAWGDNGRGQLGKGAA 1419

Query: 305  ---NT--LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE-GDHGRLGHGD 358
               NT  +  ++P    G       TQVSAG  HS AV +D   Y WG+  + G++G G+
Sbjct: 1420 GGTNTTPVQVKKPS---GAGTDFAYTQVSAGGYHSLAVGKDHQAYAWGDRSNGGQVGDGN 1476

Query: 359  LKSRHTPTLVTELS------DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
                    +    S       V  VS G  H+L++   G T ++ G G+ G+LG+     
Sbjct: 1477 TTGNAPAPVAVNASATSPGFQVRQVSAGYQHSLIIGISGQT-YAWGYGDSGRLGNNAKSS 1535

Query: 413  VTTPKVIEALRK-------FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
              TP  + +  K       F   +V AG S S+A+  DG  + WG      LG   ++ +
Sbjct: 1536 QATPVSVSSPVKYEDGSIGFFATQVSAGGSHSLAIGRDGKAYAWGANTDGRLGTGDTNDA 1595

Query: 460  FHTPVLVT----GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
               P LV     G    +  ++S G      +    ++Y WGSN     G  + S  + +
Sbjct: 1596 -AIPTLVANPDGGSDGFKPTEISAGGWFCAGIDDKGKIYTWGSNGHNALGNVSISGSISE 1654

Query: 516  PSKVVGLEDVCVRQICAG 533
             S V+  +D    QI AG
Sbjct: 1655 -SPVLVSKDGSTTQISAG 1671



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 78/169 (46%), Gaps = 7/169 (4%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI---EALRKFRVRKVCAG 433
           VS G  HTL +  DGH V++ G  + G+LG   T    TP  I   EA++      V AG
Sbjct: 223 VSAGHDHTLAVGSDGH-VYAWGDNSKGELGDSTTINKNTPVRITENEAIKGKTFISVSAG 281

Query: 434 TSFSVALTWDGLVFWWGLGLRS---SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           T+FS+AL  DG V+ WG   R    +  + ++ V V    +  I  +S G  H +ALS  
Sbjct: 282 TTFSMALASDGTVYTWGDNSRGELGNGSTTNSSVPVKANLNATITAISAGYWHAMALSSS 341

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
             +Y WG N  GQ G  +    V+     V    V    I AG  F  A
Sbjct: 342 GTIYTWGDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTA 390



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 119/297 (40%), Gaps = 79/297 (26%)

Query: 224  IEAGQFCTFLLDSTGGLLVYG---KGWLGLANT---TIQPLPKRVPLEAAIVSLSVSKCS 277
            + AG   +  L S G +  +G   KG LG   T   + +P+  +    A I ++S  +  
Sbjct: 839  VSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSSEPVKAQTD-NAKITAISAGR-- 895

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
             A+ + + S+G VY+WG    G+LG GN  S   P  +   L    +T +SAG +   A+
Sbjct: 896  -AYAMALASDGTVYTWGDNTQGQLGIGNYDSHSTPTKVTA-L--SNITAISAGFTSGTAL 951

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--------AVSCGESHTLVLSQ 389
               G  +TWG+ D G+LG+G      TPT V +L D G        A+S G  H L L  
Sbjct: 952  DSQGHAWTWGQNDKGQLGNGAPNRSPTPTRVQDL-DTGQPDTRFYIAISAGYQHVLALDT 1010

Query: 390  DGHTVWSMGSG---------NLGKLGH-------------------------EDTGKVTT 415
            D H ++  GSG         N+ K G                          +D+GK+ T
Sbjct: 1011 D-HDLYGWGSGTAIGSTTDTNVSKRGSTAISFGDEPVNITAISAGDDGSEAIDDSGKIYT 1069

Query: 416  ----------------------PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
                                  PK I   +  +   V   +    A+  DGL++ WG
Sbjct: 1070 WGKEAYGQLGNGVYDNTAWQINPKTITLAQSVKACTVSTSSHHQTAIGSDGLLYTWG 1126



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 16/181 (8%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRP-RLQSLPS---NIRH---IEAGQFCTFLLDSTGGLLV 242
             +TWG N   Q+ +    +   P R+Q L +   + R    I AG      LD+   L  
Sbjct: 957  AWTWGQNDKGQLGNGAPNRSPTPTRVQDLDTGQPDTRFYIAISAGYQHVLALDTDHDLYG 1016

Query: 243  YGKGWLGLANTTIQPLPKR----VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G G   + +TT   + KR    +      V+++     +     +   G++Y+WG   +
Sbjct: 1017 WGSG-TAIGSTTDTNVSKRGSTAISFGDEPVNITAISAGDDGSEAIDDSGKIYTWGKEAY 1075

Query: 299  GKLGHG---NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
            G+LG+G   NT  Q  PK I      K  T  ++ H H  A+  DGLLYTWG   + +LG
Sbjct: 1076 GQLGNGVYDNTAWQINPKTITLAQSVKACTVSTSSH-HQTAIGSDGLLYTWGYSYYNQLG 1134

Query: 356  H 356
             
Sbjct: 1135 R 1135



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 137/337 (40%), Gaps = 44/337 (13%)

Query: 147 ADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA-----------HSKVYTWGC 195
            D++   LGD  + N NT +  T    +    G T ISV+              VYTWG 
Sbjct: 243 GDNSKGELGDSTTINKNTPVRITENEAIK---GKTFISVSAGTTFSMALASDGTVYTWGD 299

Query: 196 NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLAN 252
           N   ++ +      S P   +L + I  I AG +    L S+G +  +G    G LG  +
Sbjct: 300 NSRGELGNGSTTNSSVPVKANLNATITAISAGYWHAMALSSSGTIYTWGDNEYGQLGNGH 359

Query: 253 TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG---NTLSQ 309
           T +        + ++ V+ +           + S+G  Y+WG  + G+L  G    T S 
Sbjct: 360 TGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQGHAYAWGRNQGGQLSIGTMDGTSSG 419

Query: 310 RR---PKLIMGGLYGKR----VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD---L 359
                P  I G   G       T + AG+ H  A++  G +Y WG      L  GD    
Sbjct: 420 SNVYTPSRIYGDSTGNPDSTVYTDIDAGYLHVLALSNSGKVYYWGY----PLTKGDDPNA 475

Query: 360 KSRHT--PTLV---TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KV 413
            S H+  P+LV   T  +   + S G+  + V+   G +++  GS + G+LG   T  K 
Sbjct: 476 DSVHSFYPSLVSLPTGAATPVSASAGDYSSAVVDSAG-SLYMFGSNSSGQLGDGTTKPKS 534

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           T  +V           VC     S+A+  DGL + WG
Sbjct: 535 TMTEVSLTGVTVAAFDVC---RHSLAIGSDGLPYSWG 568



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 18/145 (12%)

Query: 408 EDTGK----VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
           +DTG     +T PK     R  R  +  AG   ++A+  DG V+ WG      LG   +S
Sbjct: 761 DDTGGSKITLTPPKP----RAVRFAQASAGRYHTLAVGSDGHVYAWGNQASGGLGNSKNS 816

Query: 458 ISFHTPVLVT---GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD 514
            +  TPV +T    +     + VS GD++ +AL+    VY WG+N  GQ G     +   
Sbjct: 817 GTATTPVRITENDAIKGKIFIAVSAGDAYSMALASDGTVYTWGNNGKGQLGNGTTGSYSS 876

Query: 515 QPSKVVGLEDVCVRQICAGSLFSIA 539
           +P K    ++  +  I AG  +++A
Sbjct: 877 EPVKAQ-TDNAKITAISAGRAYAMA 900



 Score = 46.6 bits (109), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 110/298 (36%), Gaps = 39/298 (13%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAH---------SKVYTW 193
           + T  D++   LG+  ++NS+  +      K   N   T IS  +           +YTW
Sbjct: 294 VYTWGDNSRGELGNGSTTNSSVPV------KANLNATITAISAGYWHAMALSSSGTIYTW 347

Query: 194 GCNLHHQILDEVRG---KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GW 247
           G N + Q+ +   G     S   + S       I AG      LDS G    +G+   G 
Sbjct: 348 GDNEYGQLGNGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQGHAYAWGRNQGGQ 407

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA----------HVLTVTSEGEVYSWGVG- 296
           L +           V   + I   S                 HVL +++ G+VY WG   
Sbjct: 408 LSIGTMDGTSSGSNVYTPSRIYGDSTGNPDSTVYTDIDAGYLHVLALSNSGKVYYWGYPL 467

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
             G   + +++    P L+            SAG   SA V   G LY +G    G+LG 
Sbjct: 468 TKGDDPNADSVHSFYPSLVSLPTGAATPVSASAGDYSSAVVDSAGSLYMFGSNSSGQLGD 527

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGES---HTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           G  K + T   +TE+S  G          H+L +  DG   +S G    GKLG    G
Sbjct: 528 GTTKPKST---MTEVSLTGVTVAAFDVCRHSLAIGSDG-LPYSWGEAKSGKLGQGSKG 581



 Score = 46.2 bits (108), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 113/293 (38%), Gaps = 54/293 (18%)

Query: 96  SSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACLVYLILVTLADDNIKPLG 155
           S+  S VP+  +L   NA +  +      A ++    + S+  +Y    T  D+    LG
Sbjct: 309 STTNSSVPVKANL---NATITAIS-----AGYWHAMALSSSGTIY----TWGDNEYGQLG 356

Query: 156 DRKSSNSNTDIDSTSTPKLTYNIGDTDISVA-----------HSKVYTWGCNLHHQI-LD 203
                N +T ++  ++P    + G T  +++               Y WG N   Q+ + 
Sbjct: 357 -----NGHTGVNVNASPAAVSSSGVTFTTISAGYDFQTALDSQGHAYAWGRNQGGQLSIG 411

Query: 204 EVRGKCSRPRLQSLPSNI-------------RHIEAGQFCTFLLDSTGGLLVYG----KG 246
            + G  S   + + PS I               I+AG      L ++G +  +G    KG
Sbjct: 412 TMDGTSSGSNVYT-PSRIYGDSTGNPDSTVYTDIDAGYLHVLALSNSGKVYYWGYPLTKG 470

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
               A++     P  V L     +   +   +     V S G +Y +G    G+LG G T
Sbjct: 471 DDPNADSVHSFYPSLVSLPTGAATPVSASAGDYSSAVVDSAGSLYMFGSNSSGQLGDGTT 530

Query: 307 LSQRRPKLIMG--GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
               +PK  M    L G  V        HS A+  DGL Y+WGE   G+LG G
Sbjct: 531 ----KPKSTMTEVSLTGVTVAAFDVCR-HSLAIGSDGLPYSWGEAKSGKLGQG 578


>gi|328712156|ref|XP_001946936.2| PREDICTED: serine/threonine-protein kinase Nek8-like [Acyrthosiphon
           pisum]
          Length = 516

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 23/266 (8%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           P ++P    IV L+VS   + H + +TS+  +++WG  +HG+LGHG     +     +  
Sbjct: 146 PVQLPFRVQIVQLAVS---QTHFVALTSDYSIFTWGEDKHGQLGHGEETPWKNDPQCVVS 202

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGA 376
           L  K +TQV AGH+ S  V+  GL+ T G+G +G LGHGD  S   P L+  L   DV  
Sbjct: 203 LLDKHITQVGAGHNFSVFVSSTGLVMTTGDGKYGALGHGDWNSVSRPKLIDFLLKVDVVK 262

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           +SCG  H   L+ +G  +++ G GN G+LG  +      P ++      ++  +  G   
Sbjct: 263 ISCGNYHLAALTNEGQ-LYTWGRGNHGQLGLGNLQDCCFPILVNWHLDEKIGSIKCGPEC 321

Query: 437 SVALTWDGLVFWWGLGLRSSSISFHTPVL----------------VTGLSSHQIVDVSIG 480
           +  +T    V+  GL  + + +  + P L                V  L   ++  V  G
Sbjct: 322 TAVITDCQNVYACGLN-KCNKLGLNRPSLFKLKFKEVPFESLFTKVKFLDGLRVTYVCFG 380

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCGQ 506
           + H  A++    V  WGSN   Q G+
Sbjct: 381 ECHSAAITAQGHVVIWGSNIYSQRGK 406



 Score = 42.0 bits (97), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 454 RSSSISFHTPVLVTGLS---SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           RS    F +P  +T +      QIV +++  +H +AL+    ++ WG +  GQ G    +
Sbjct: 132 RSVVYQFSSPTNLTPVQLPFRVQIVQLAVSQTHFVALTSDYSIFTWGEDKHGQLGHGEET 191

Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSI 538
              + P  VV L D  + Q+ AG  FS+
Sbjct: 192 PWKNDPQCVVSLLDKHITQVGAGHNFSV 219


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 21/230 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG   +G+LG G       +  R+ +      +GKRV  V  G  H+A + EDG +YT G
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEF----FHGKRVRDVGCGRRHTAFLLEDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L    + A+SCGESHTL L+  G  V+S G G+ G+L
Sbjct: 60  CNDLGQLGHE--KSRKKPEQVVALDAQIIVALSCGESHTLALNDKGQ-VFSWGLGSDGQL 116

Query: 406 GHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           G  +  + +  P+ I++L   +V +V  G   S+AL+  G +F WG      LGL  +  
Sbjct: 117 GLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQ 176

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
           S   P  +  L       ++ G +H  AL+    V+ WG N  GQ G ++
Sbjct: 177 SISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLND 226



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 166/354 (46%), Gaps = 30/354 (8%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRV-PLEAAI-VSLSVSKCS 277
           +R +  G+  T  L   G +   G   LG L +   +  P++V  L+A I V+LS   C 
Sbjct: 36  VRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQIIVALS---CG 92

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E+H L +  +G+V+SWG+G  G+LG  N     R    +  L   +V QV+ G+ HS A+
Sbjct: 93  ESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLAL 152

Query: 338 TEDGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV 394
           ++ G +++WG+  +G+LG G   +S   P  +  L  +    ++ G +H+  L+  G  V
Sbjct: 153 SKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSG-AV 211

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           +  G    G+LG  DT     P +++ALR  RV  +  G   + ALT +G VF +G G  
Sbjct: 212 FGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGY 271

Query: 453 --LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALS-QYNEVYAWGSNTMGQCGQDN 508
             L  +S +    P  V  L  + +  ++ G  H LA +    ++ ++G    GQ G  +
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRS 331

Query: 509 FSN-----PVDQP--------SKVVGLEDVCVRQICAGSLFSIAYTVPPSNSAL 549
             N     PV  P           +G E   V +I AG   S A+    SN  +
Sbjct: 332 TCNRKSPAPVKGPWASSSASSDSDIG-ESCVVNRIYAGGDQSFAHYSSSSNEQM 384



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 98/214 (45%), Gaps = 21/214 (9%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--------VGAVSCGESHTLVLSQDGHTV 394
           +  WG   +G+LG G +       +V E           V  V CG  HT  L +DG TV
Sbjct: 1   MLCWGNASYGQLGLGGIDEE----IVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDG-TV 55

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           ++ G  +LG+LGHE + K   P+ + AL    +  +  G S ++AL   G VF WGLG  
Sbjct: 56  YTCGCNDLGQLGHEKSRK--KPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSD 113

Query: 453 ----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
               L +       P  +  LS  Q+  V+ G  H LALS+   +++WG N  GQ G   
Sbjct: 114 GQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGM 173

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
               +  P  +  L+ +   QI AG   S A T+
Sbjct: 174 TGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTL 207



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 11/243 (4%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V++WG     Q+      +C R PR ++SL    +  +  G + +  L   G +  +G
Sbjct: 103 GQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWG 162

Query: 245 K---GWLGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           +   G LGL  T     +P+ +     I    ++    AH   +T  G V+ WG  + G+
Sbjct: 163 QNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIA-AGGAHSFALTLSGAVFGWGRNKFGQ 221

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           LG  +T  +  P L+   L  +RV  +S G  H+AA+T++G ++T+G G +G+LGH    
Sbjct: 222 LGLNDTNDRCFPALLKA-LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V EL    V  ++CG  HTL  +     + S G G  G+LG   T    +P  
Sbjct: 281 HEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAP 340

Query: 419 IEA 421
           ++ 
Sbjct: 341 VKG 343


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ V  L +  +V +S GD+H   L+Q  +V+ +G N  GQ G
Sbjct: 210 SGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 42/329 (12%)

Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R   Q   LP  I+ +E         G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G    SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   VGA        +SCG++HT VL+QDG  V++ G    G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H+  L     
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHSEALTENFD 333

Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
               +S+  +VDV +   H+ A +  N V
Sbjct: 334 ISCLISAEDLVDVHV--KHIFAGTYANFV 360



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           + WG            L +RR      G  G  + Q ++G  HS  +  +  + + G+  
Sbjct: 3   FCWGTD-------SRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51

Query: 351 HGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
            G+LG    +    P  +  L    V  VSCG+ H+L +   G  V++ G+G+ G+LG  
Sbjct: 52  RGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110

Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
           +  +++ TPK I  L   ++ +V  G   S+AL+ D  VF WG      LGL     S  
Sbjct: 111 EFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170

Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
           +P  V  L    +  V+ G +H  ALS     + WGSN+ GQ      + PV  ++P  V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV 230

Query: 520 VGLEDVCVRQICAG 533
             L+++ V  I  G
Sbjct: 231 GALKNLGVVYISCG 244



 Score = 89.0 bits (219), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 9/170 (5%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   S+A
Sbjct: 31  GERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLA 89

Query: 440 LTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           +   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+ ++
Sbjct: 90  VCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSKDSQ 148

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
           V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 149 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  E   + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 ---KGWLGLANTTIQPLPKRVPLE-AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C +AH   +T +G+V+++G    
Sbjct: 207 SNSSGQLALSGRNV-PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVVSFGHG 315


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 11/253 (4%)

Query: 206 RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLE 265
           RG+ SR       + +R   +G+  + LL S G +   G    G       P  KR  L 
Sbjct: 10  RGRQSREAAGG--AELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLI 67

Query: 266 AAIVSLSVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            A+ +L+V    C + H L V  +G V++WG G  G+LG G         + +  L G +
Sbjct: 68  QALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIK 127

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCG 380
           + QVS GH HS A+++DG +++WG   HG+LG G +  S+ +P  V  L  +    V+ G
Sbjct: 128 IIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAG 187

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKL---GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
            +H+  LS  G T +  GS N G+L   G+    +   P+ I AL++  V  +  G+  +
Sbjct: 188 GAHSFALSLSG-TSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246

Query: 438 VALTWDGLVFWWG 450
             LT DG VF +G
Sbjct: 247 AVLTQDGKVFTFG 259


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 160/364 (43%), Gaps = 40/364 (10%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           S ++ I  G   T  L + G +   G      LG    T +PLP  +P   A V + ++ 
Sbjct: 36  SPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP--IPELQAYVVIQIA- 92

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +T  G++ SWG  + G++GH           I+  L  + V Q++ G++HS 
Sbjct: 93  CGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSL 152

Query: 336 AVTEDGLLYTWGEGDHGRLG---HGDLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
           A+T  G LY+WG   +G+LG     DL   + P  +T +  +    ++CG +H+ ++S+ 
Sbjct: 153 ALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKS 212

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
              V+  G    G+LG  D      P  ++++R   VR V  G  +SV LT +G VF  G
Sbjct: 213 S-AVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCG 271

Query: 451 LGLRSS-----SISFHTPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQC 504
            G         S +   P +V  L    I  V+ G+ H LAL      VY++G    GQ 
Sbjct: 272 AGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQL 331

Query: 505 GQDN---------FSNPVDQPSKVVGLE-------DVCVRQICAGSLFSIAYT------V 542
           G  N            P   PS    +E        V +R+I +G   SI  T      V
Sbjct: 332 GTRNTISQTLPKVVIGPWVSPSGSALMESSEGADKSVVIRKIFSGGDQSIVTTTFYVDKV 391

Query: 543 PPSN 546
           PP +
Sbjct: 392 PPED 395



 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 16/264 (6%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR---VTQVSAGHSHSAAVTEDGLLYTW 346
           +Y WG   HG+LG G   +++   L+   +  K    V Q++ GH H+  +T +G +Y  
Sbjct: 3   LYCWGDASHGQLGLGGIENEQ--ILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYAC 60

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G  DH +LGH     R  P    +   V  ++CG  H++ L++ G  + S G  + G++G
Sbjct: 61  GNNDHHQLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQ-ILSWGDNDCGQVG 119

Query: 407 HE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           H  D   +  PK++  L    V ++  G + S+ALT  G ++ WG      LG++S    
Sbjct: 120 HSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL 179

Query: 460 FHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
            H+  P+ +T +    +  ++ G +H   +S+ + V+ WG NT GQ G ++  N    PS
Sbjct: 180 PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA-YPS 238

Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
           ++  +  + VR +  G  +S+  T
Sbjct: 239 QLKSMRTLGVRFVTCGDEYSVFLT 262



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLV--- 242
           S V+ WG N   Q+ L++ + +    +L+S+ +  +R +  G   +  L + GG+     
Sbjct: 213 SAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGA 272

Query: 243 --YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHG 299
             YG+   G++N  + P   R+ +E    +++   C   H L  V S G VYS+G+G  G
Sbjct: 273 GNYGQLGHGVSNNEMIP---RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASG 329

Query: 300 KLGHGNTLSQRRPKLIMG 317
           +LG  NT+SQ  PK+++G
Sbjct: 330 QLGTRNTISQTLPKVVIG 347


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 139/279 (49%), Gaps = 21/279 (7%)

Query: 246 GWLGLAN--TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL +  +TI+P    V     IVSLS    +  HV+  T++GEV++WG   + +LG+
Sbjct: 52  GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYG--TGPHVVIATADGEVFAWGHNGYSQLGN 109

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T     P L+   L GKRVT+V+ G  H+ A+T DG ++ WG  + G++G G   ++ 
Sbjct: 110 GTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQP 169

Query: 364 TPTLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           TP  V+   +   V  V CG+  ++ +  +G  ++  G    G+LG  + G   TP  I 
Sbjct: 170 TPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGE-IYGWGYNCNGQLGLGNNGNQQTPCRIA 228

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
           AL+   V +V  G + ++ALT +G V+ WG      LG  + S +   P L+       +
Sbjct: 229 ALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKS-NQALPTLINTDKERMV 287

Query: 475 VDVSIGDSHV-LALSQYNEVYAWGSNTMGQCGQDNFSNP 512
              +   SH   A +Q  +V  W     GQC     S+P
Sbjct: 288 EVAACHTSHTSAAKTQSGQVLMW-----GQCRGQAVSSP 321


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 30/285 (10%)

Query: 224 IEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK----- 275
           +  G   T L+   G L  +G    G LGL +T     P      + + SL   K     
Sbjct: 40  VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKP------SCVKSLKHEKAKLVA 93

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C  +H L  T +G+VY WG G  G+LG G +T     P L+    +  +   VS G+ H+
Sbjct: 94  CGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLD---FDSKAISVSCGYYHT 150

Query: 335 AAVTEDGLLYTWGEGDHGRLG--HGDLKSRHTPTLVTELSD-VGAVSCGESHTLVLSQDG 391
           A VTEDG LYT+GE ++G+LG  + DL S  TP  VT + + V  V CG  HT  +++ G
Sbjct: 151 AVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESG 210

Query: 392 HTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
             V++ G+G  G+LGH ++  +  TP  +E  R    +    G +F+  +T  G ++ +G
Sbjct: 211 -AVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFG 269

Query: 451 ------LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALS 488
                 LGL   S +    P  V   +  Q+  V+ G  H++ ++
Sbjct: 270 DGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIA 314



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 18/231 (7%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG 380
           R+  V+ G  H+A VTE+G LYT+G  D G+LG G  K+   P+ V  L    A  V+CG
Sbjct: 36  RICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACG 95

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            SHTL+ + DG  V+  G G+ G+LG  EDT + T P +++   K     V  G   +  
Sbjct: 96  RSHTLIATGDGK-VYVWGGGSEGQLGLGEDTTECTEPTLLDFDSK--AISVSCGYYHTAV 152

Query: 440 LTWDGLVFWWG------LGLRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
           +T DG ++ +G      LGL +S + S  TP  VTG+   ++  V  G  H  A+++   
Sbjct: 153 VTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGI-KEKVKFVVCGGGHTTAIAESGA 211

Query: 493 VYAWGSNTMGQCGQDN--FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           VY +G+   GQ G  N    +P   P +V    D   +    G  F+   T
Sbjct: 212 VYTFGNGASGQLGHGNSLLESPT--PHRVERFRDADCKHASCGENFTAVIT 260


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 137/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 26  ASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEA-LCGKKIK 84

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 85  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 144

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 145 HHSVALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 203

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL  ++++  TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 204 LDNGEVYGWGYNGNGQLGL-GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 262

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 263 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 309



 Score =  100 bits (249), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 110 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGS 169

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 170 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQL 229

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 230 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 287

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 288 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 318



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 240 LLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           + V+G  +   LG  +     +PK++         S+S  S  HVL  T +G VY+WG  
Sbjct: 50  VFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHN 109

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            + +LG+G T     P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G 
Sbjct: 110 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGS 169

Query: 357 GDLKSRHTPTLVTE---LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           G   ++ TP  VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  +    
Sbjct: 170 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNVNQ 228

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            TP  + AL    V ++  G + ++ALT +GL++ WG
Sbjct: 229 LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 265



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 151 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 210

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 211 GWGYNGNGQLGLGNNVNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 267

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 268 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 319


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 99/180 (55%), Gaps = 4/180 (2%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C + H L ++  GE+++WG   HG+LG G          I+  L G  + Q+SAG SHS 
Sbjct: 43  CGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSM 102

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
           A++  G +Y+WG  D G+LG G    +  P+L+  L +  V  ++CG SHT +L++DG  
Sbjct: 103 ALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDG-L 161

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWGLG 452
           V++ G+G  G+LGH  T     P ++  L   RV +V  G   ++A   D G VF +G G
Sbjct: 162 VFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSG 221



 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 6/203 (2%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
            NI  I  G + +  L   G L  +G+   G LG+          ++    + V L+   
Sbjct: 36  KNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQIS 95

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
             ++H + ++  G +YSWG  + G+LG G+T  +  P LI   L  ++V  ++ G SH+A
Sbjct: 96  AGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIE-ALENQKVEFLACGGSHTA 154

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHT 393
            +T+DGL++T+G G +G+LGH   ++   P LVT+L+   V  V+CG  HTL    D   
Sbjct: 155 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGK 214

Query: 394 VWSMGSGNLGKLGHEDTGKVTTP 416
           V+S GSG  G+LG+  T     P
Sbjct: 215 VFSFGSGEEGQLGNGGTHNQLIP 237



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 28/252 (11%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H+L ++S+G+ + +            ++   R + I   L  K + Q++ G  HS A+++
Sbjct: 7   HMLILSSDGKPFEYNY----------SIEHARFQCI---LQEKNIIQITCGDYHSLALSK 53

Query: 340 DGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWS 396
            G L+ WG+  HG+LG G +  S   P +V  LS V    +S G+SH++ LS  G+ ++S
Sbjct: 54  GGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGN-IYS 112

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
            G  + G+LG   T     P +IEAL   +V  +  G S +  LT DGLVF +G G    
Sbjct: 113 WGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ 172

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQCGQDNFS 510
              +S+ +   P LVT L+ +++  V+ G  H LA +S   +V+++GS   GQ G     
Sbjct: 173 LGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTH 232

Query: 511 N-----PVDQPS 517
           N     P+  PS
Sbjct: 233 NQLIPLPMKLPS 244



 Score = 89.0 bits (219), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 15/187 (8%)

Query: 189 KVYTWGCNLHHQ-----ILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
           +++ WG NLH Q     I D          L  +P  +  I AG+  +  L  +G +  +
Sbjct: 56  ELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVP--LAQISAGKSHSMALSVSGNIYSW 113

Query: 244 GK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           G+   G LGL +T  +  P  +  LE   V      C  +H   +T +G V+++G G++G
Sbjct: 114 GRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLA--CGGSHTALLTKDGLVFTFGAGKYG 171

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLGHGD 358
           +LGH +T ++ RP L+   L G RVTQV+ G  H+ A   D G ++++G G+ G+LG+G 
Sbjct: 172 QLGHNSTQNELRPCLVT-KLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGG 230

Query: 359 LKSRHTP 365
             ++  P
Sbjct: 231 THNQLIP 237



 Score = 56.6 bits (135), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 21/162 (12%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
           G  H L+LS DG                E    +   +    L++  + ++  G   S+A
Sbjct: 4   GAEHMLILSSDGKPF-------------EYNYSIEHARFQCILQEKNIIQITCGDYHSLA 50

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           L+  G +F WG      LG+     S   P +V  LS   +  +S G SH +ALS    +
Sbjct: 51  LSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNI 110

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           Y+WG N  GQ G  + ++  D PS +  LE+  V  + C GS
Sbjct: 111 YSWGRNDFGQLGLGH-TDDKDFPSLIEALENQKVEFLACGGS 151



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%)

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
           L    I+ ++ GD H LALS+  E++AWG N  GQ G     +    P  V  L  V + 
Sbjct: 33  LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLA 92

Query: 529 QICAGSLFSIAYTV 542
           QI AG   S+A +V
Sbjct: 93  QISAGKSHSMALSV 106


>gi|147920282|ref|YP_685948.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
 gi|110621344|emb|CAJ36622.1| predicted regulator of chromosome condensation [Methanocella
           arvoryzae MRE50]
          Length = 451

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 168/364 (46%), Gaps = 41/364 (11%)

Query: 182 DISVA---HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
           D+SVA   +  V+ WG             +   P L  + +NI    AG F    L   G
Sbjct: 42  DVSVALNDNGTVFMWGDTRDGTF------RSDEPVLVDI-TNITAASAGVFNALFLKDDG 94

Query: 239 GLLVYGKGWLG-LANTTIQPLPKRVPLE--AAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
            +   G    G L + T     K V ++  + +V++S   C   H L +  +G V++WG 
Sbjct: 95  TVWAIGDNEYGQLGDGTRVDSSKAVQVQCLSEVVAISAGDC---HNLALKRDGTVWAWGC 151

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
              G++G+ N        + + GL G  V ++SAG+  S A+T DG ++ WG  ++G++G
Sbjct: 152 NLFGQIGNDNVGHDELTPVQVPGLSG--VKEISAGYMGSKAITGDGTVWAWGINEYGQIG 209

Query: 356 HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH--EDTGKV 413
            G  + R  P  ++ +++V A+  GE  T +  +   +VW+ G+   G+LG   EDT  +
Sbjct: 210 DGTKEIRSLPVRIS-INNVSAIDTGEYGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSM 268

Query: 414 TTP-------KVIEALRK--FRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSS 456
             P       +++       + V  V AG   S+A+  DG ++ WG         GL+  
Sbjct: 269 MLPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGENQEGRFGNGLKFG 328

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
             S   PV+V GL  + IV V  G S++LALS    VY WG N  G  G    S  V +P
Sbjct: 329 RDSIR-PVIVPGL--NNIVSVKAGASYMLALSDDGTVYGWGKNIFGAVGNGERSETVVKP 385

Query: 517 SKVV 520
             V+
Sbjct: 386 LIVI 389



 Score = 76.3 bits (186), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 135/297 (45%), Gaps = 40/297 (13%)

Query: 264 LEAAIVSLSVSKCSEAHV-LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           + A   S  VS  ++A V + +   G V+ WG    G      T     P L+       
Sbjct: 26  MPATAFSKVVSIDAQADVSVALNDNGTVFMWGDTRDG------TFRSDEPVLV----DIT 75

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
            +T  SAG  ++  + +DG ++  G+ ++G+LG G          V  LS+V A+S G+ 
Sbjct: 76  NITAASAGVFNALFLKDDGTVWAIGDNEYGQLGDGTRVDSSKAVQVQCLSEVVAISAGDC 135

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           H L L +DG TVW+ G    G++G+++ G    TP  +  L    V+++ AG   S A+T
Sbjct: 136 HNLALKRDG-TVWAWGCNLFGQIGNDNVGHDELTPVQVPGLSG--VKEISAGYMGSKAIT 192

Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGD-SHVLALSQYNEVY 494
            DG V+ WG      +G  +  I    PV +   S + +  +  G+    +AL     V+
Sbjct: 193 GDGTVWAWGINEYGQIGDGTKEIR-SLPVRI---SINNVSAIDTGEYGTSIALKSDGSVW 248

Query: 495 AWGSNTMGQCG---QDNFSN--PVDQ-------PSKVVGLEDVCVRQICAGSLFSIA 539
            WG+N  GQ G   +D  S   PV         P K  GL +V    + AG+  S+A
Sbjct: 249 TWGNNGQGQLGDPAEDTLSMMLPVSNLGSERLVPGKTGGLYNVT--SVSAGARNSLA 303



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 59/219 (26%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
           +V  + A    S A+ ++G ++ WG+   G         R    ++ +++++ A S G  
Sbjct: 33  KVVSIDAQADVSVALNDNGTVFMWGDTRDGTF-------RSDEPVLVDITNITAASAGVF 85

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           + L L  DG TVW++G    G+LG  D  +V + K ++                      
Sbjct: 86  NALFLKDDG-TVWAIGDNEYGQLG--DGTRVDSSKAVQ---------------------- 120

Query: 443 DGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
                                  V  LS  ++V +S GD H LAL +   V+AWG N  G
Sbjct: 121 -----------------------VQCLS--EVVAISAGDCHNLALKRDGTVWAWGCNLFG 155

Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           Q G DN  +    P +V GL    V++I AG + S A T
Sbjct: 156 QIGNDNVGHDELTPVQVPGLS--GVKEISAGYMGSKAIT 192


>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
           terrae PB90-1]
 gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
           PB90-1]
          Length = 1848

 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 178/398 (44%), Gaps = 50/398 (12%)

Query: 191 YTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFL---------LDSTGGLL 241
           Y WG N   Q+ +   G      +  + ++   + AG+    L         L S G + 
Sbjct: 135 YAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLAGKTLVALATSYRHSLALASDGTVY 194

Query: 242 VYG---KGWLGLAN----TTIQPLPKRVPLEAAIVSLSVSKCSEA--HVLTVTSEGEVYS 292
            +G    G LG  +    T I  +P  V +   +   ++   +    H L + S+G VY+
Sbjct: 195 AWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALASDGIVYA 254

Query: 293 WGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           WG    G+LG G+T   + P  +   G L GK V  ++AG +HS AV  DG +Y WG+  
Sbjct: 255 WGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVASDGTVYAWGDNY 314

Query: 351 HGRLGHGDLKSRHTPTLV--TELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           + +LG G L     P  V  TEL+   V  V+ G+ H+L  + DG TV++ G    G++G
Sbjct: 315 YAQLGDGSLTDSSVPVPVDLTELAGKSVADVAGGDRHSLAQASDG-TVYAWGDNTNGQMG 373

Query: 407 HEDTGKVTTPKVI-----EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
             DT     P  +      AL    +  V AG   ++AL  DG V  WG      LG  S
Sbjct: 374 --DTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDGTVCTWGYNYNGQLGNNS 431

Query: 456 SSISFHT--PVLVT---GLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
           S     +  P+ V     L    IV V  G SH LAL+    +  WG N+ GQ G ++ +
Sbjct: 432 SGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDNSTT 491

Query: 511 N---PVDQPSKVVGLEDVCVRQICAGSLFSIA-YTVPP 544
           N   PV   +   GL    +   C  +++S+A  TVPP
Sbjct: 492 NRTVPVTVSAG--GLMFQALGTTCD-AVYSLALATVPP 526


>gi|310818131|ref|YP_003950489.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309391203|gb|ADO68662.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 512

 Score =  115 bits (288), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 88/243 (36%), Positives = 123/243 (50%), Gaps = 29/243 (11%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGN--TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           V  +G +Y WG    G+LG G   T  QR PK + G    + V  V+   +HS A+ EDG
Sbjct: 155 VVRQGALYLWGRNNRGQLGLGAEVTADQRVPKPVPG---MEGVAAVALNQNHSMALKEDG 211

Query: 342 LLYTWGEGDHGRLGHG-----------DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
            ++ WGE   G+LG G           DL +R +PT V  LS   A++ G  H+LVL +D
Sbjct: 212 TVWAWGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSGAVALALGYRHSLVLMED 271

Query: 391 GHTVWSMGSGNLGKLGHEDT-GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           G TV + G  + G+LG   T      P ++  L +  V KV AG+  SVAL  DG V+ W
Sbjct: 272 G-TVRAFGDNSTGQLGDGTTESPRDYPVLVGGLTE--VVKVVAGSMHSVALKRDGTVWVW 328

Query: 450 G------LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
           G      LG  +   + H TP  V G+++   VD++ G  H+L L     V +WG +  G
Sbjct: 329 GRNTYGNLGQGTQDSTAHPTPAQVPGVANG--VDIATGRDHILVLHAGGTVSSWGLDASG 386

Query: 503 QCG 505
           Q G
Sbjct: 387 QLG 389



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 145/353 (41%), Gaps = 39/353 (11%)

Query: 185 VAHSKVYTWGCNLHHQIL--DEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           V    +Y WG N   Q+    EV      P+       +  +   Q  +  L   G +  
Sbjct: 156 VRQGALYLWGRNNRGQLGLGAEVTADQRVPKPVPGMEGVAAVALNQNHSMALKEDGTVWA 215

Query: 243 YG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEA--------HVLTVTSEGEVY 291
           +G   +G LGL        P+   L A      V   S A        H L +  +G V 
Sbjct: 216 WGENAQGQLGLGKPPEAGQPRTPDLTARWSPTRVEGLSGAVALALGYRHSLVLMEDGTVR 275

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           ++G    G+LG G T S R   +++GGL    V +V AG  HS A+  DG ++ WG   +
Sbjct: 276 AFGDNSTGQLGDGTTESPRDYPVLVGGL--TEVVKVVAGSMHSVALKRDGTVWVWGRNTY 333

Query: 352 GRLGHG--DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG---SGNLG--- 403
           G LG G  D  +  TP  V  +++   ++ G  H LVL   G TV S G   SG LG   
Sbjct: 334 GNLGQGTQDSTAHPTPAQVPGVANGVDIATGRDHILVLHAGG-TVSSWGLDASGQLGFGE 392

Query: 404 -KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-----RSSS 457
              G +    V    +++A      R V A  + S A   DG +  WG          S 
Sbjct: 393 AIPGEQSNAPVQVKNLVDA------RFVFANGNMSYAQRADGTLLSWGQNFNGQLGNGSK 446

Query: 458 ISFHTPV-LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
              + PV    GL    ++ +S G +HV+A  +   ++ WG +  G  G+++ 
Sbjct: 447 TDTNVPVPAAEGLKG--LLTLSPGATHVVAFHRDGSLFTWGWSFSGSLGREDL 497



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 34/241 (14%)

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD--LKS 361
           GNT +++      GGL G       AG SH+  V + G LY WG  + G+LG G      
Sbjct: 131 GNT-AEQTVSFHFGGLSG-------AGGSHTGVVRQ-GALYLWGRNNRGQLGLGAEVTAD 181

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGKVTTPKV 418
           +  P  V  +  V AV+  ++H++ L +DG TVW+ G    G+LG     + G+  TP +
Sbjct: 182 QRVPKPVPGMEGVAAVALNQNHSMALKEDG-TVWAWGENAQGQLGLGKPPEAGQPRTPDL 240

Query: 419 IEALRKFRVRKVCA------GTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
                  RV  +        G   S+ L  DG V  +G      LG  ++      PVLV
Sbjct: 241 TARWSPTRVEGLSGAVALALGYRHSLVLMEDGTVRAFGDNSTGQLGDGTTESPRDYPVLV 300

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG---QDNFSNPVDQPSKVVGLE 523
            GL+  ++V V  G  H +AL +   V+ WG NT G  G   QD+ ++P   P++V G+ 
Sbjct: 301 GGLT--EVVKVVAGSMHSVALKRDGTVWVWGRNTYGNLGQGTQDSTAHPT--PAQVPGVA 356

Query: 524 D 524
           +
Sbjct: 357 N 357



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 44/258 (17%)

Query: 143 LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNI---GDTDI---------SVAHSK- 189
           LV + D  ++  GD  +       D T+     Y +   G T++         SVA  + 
Sbjct: 266 LVLMEDGTVRAFGDNSTGQLG---DGTTESPRDYPVLVGGLTEVVKVVAGSMHSVALKRD 322

Query: 190 --VYTWGCNLHHQILDEVRGKCSRPRLQSLP--SNIRHIEAGQFCTFLLDSTGGLLVYG- 244
             V+ WG N +  +    +   + P    +P  +N   I  G+    +L + G +  +G 
Sbjct: 323 GTVWVWGRNTYGNLGQGTQDSTAHPTPAQVPGVANGVDIATGRDHILVLHAGGTVSSWGL 382

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVT--------SEGEVYSWG 294
              G LG            +P E +   + V    +A  +           ++G + SWG
Sbjct: 383 DASGQLGFGEA--------IPGEQSNAPVQVKNLVDARFVFANGNMSYAQRADGTLLSWG 434

Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
              +G+LG+G+      P     GL G  +  +S G +H  A   DG L+TWG    G L
Sbjct: 435 QNFNGQLGNGSKTDTNVPVPAAEGLKG--LLTLSPGATHVVAFHRDGSLFTWGWSFSGSL 492

Query: 355 GHGDLKSRHT---PTLVT 369
           G  DL  R T   P LVT
Sbjct: 493 GREDLLDRWTYTEPILVT 510


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 141/263 (53%), Gaps = 18/263 (6%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  ++    +PK++   +    +S+S  S  H+L  T +GE+++WG   + +LG+G T 
Sbjct: 54  LGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P L+   L  K+VT+V+ G  HS A+T+ G +Y WG  + G++G G   ++ TP  
Sbjct: 114 QGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQVGSGSTANQPTPRR 173

Query: 368 VTE-LSDVGAVS--CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           V+  L +  AVS  CG++ +L +  +G  V+  G    G+LG  + G   TP  +  L+ 
Sbjct: 174 VSSCLQNKVAVSIVCGQTSSLAVVDNGE-VYGWGYNGNGQLGLGNNGNQVTPCRLVGLQG 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWGL--------GLRSSSISFHTPVLVTGLSSHQIVD 476
             V+++ +G + S+ALT +GL++ WG         G +S+ +S   PV +      +IV+
Sbjct: 233 LCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSNQLS---PVQIL-TEKERIVE 288

Query: 477 VSIGDS-HV-LALSQYNEVYAWG 497
           ++   S H   A +Q  +VY WG
Sbjct: 289 IAACHSTHTSAAKTQSGQVYMWG 311



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 16/258 (6%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    + +T++ EV+ +G+     LG G++LS   PK  +  L G++V 
Sbjct: 19  ASIRKACVFGSSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIVPKK-LDFLSGRKVV 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SDVGAVSCGE 381
            +S G   H    TEDG L+ WG   + +LG+G       P LV+       V  V+CG 
Sbjct: 78  SLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL--RKFRVRKVCAGTSFSVA 439
            H++ L+  G  V++ G  N G++G   T    TP+ + +    K  V  VC  TS S+A
Sbjct: 138 HHSMALTDTGE-VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTS-SLA 195

Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           +  +G V+ WG      LGL ++     TP  + GL    +  +  G +H +AL+    +
Sbjct: 196 VVDNGEVYGWGYNGNGQLGLGNNGNQV-TPCRLVGLQGLCVQQIVSGYAHSMALTDEGLL 254

Query: 494 YAWGSNTMGQCGQDNFSN 511
           YAWG+NT GQ G  N SN
Sbjct: 255 YAWGANTYGQLGTGNKSN 272



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 9/226 (3%)

Query: 232 FLLDSTGGLLVYG-KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEG 288
            L    G L  +G  G+  L N T       V + A +++  V++  C   H + +T  G
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTG 147

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
           EVY+WG    G++G G+T +Q  P+ +   L  K    +  G + S AV ++G +Y WG 
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGY 207

Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             +G+LG G+  ++ TP  +  L    V  +  G +H++ L+ +G  +++ G+   G+LG
Sbjct: 208 NGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEG-LLYAWGANTYGQLG 266

Query: 407 HEDTGKVTTPKVIEALRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
             +     +P  I    K R+ ++  C  T  S A T  G V+ WG
Sbjct: 267 TGNKSNQLSPVQI-LTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 80/169 (47%), Gaps = 13/169 (7%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIR-HIEAGQFCTFLLDSTG---GLLV 242
           +VY WG N   Q+          PR  S  L + +   I  GQ  +  +   G   G   
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGY 207

Query: 243 YGKGWLGLANTTIQPLPKR-VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
            G G LGL N   Q  P R V L+   V   VS    AH + +T EG +Y+WG   +G+L
Sbjct: 208 NGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVS--GYAHSMALTDEGLLYAWGANTYGQL 265

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           G GN  +Q  P  I+     +R+ +++A HS   SAA T+ G +Y WG+
Sbjct: 266 GTGNKSNQLSPVQIL--TEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  115 bits (288), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 127/259 (49%), Gaps = 24/259 (9%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQR-----RPKLIMGGLYGKRVTQVSAGHSHSAA 336
           L +   G V S+G  ++G LGHG    ++     RP+ I   L  ++V  VSAG  HS  
Sbjct: 51  LMLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYI-DALKNEKVICVSAGELHSGC 109

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT----ELSDVGAVSCGESHTLVLSQDGH 392
           VT DG +YTWGEG  G+LG GD +    P  VT    E   V  +SCG  HTLV++++G 
Sbjct: 110 VTADGDVYTWGEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGE 169

Query: 393 TVWSMGSGNLG-----KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
            V+S G G  G      L  +D      PK+++AL  FR   V AG   S+ L   G ++
Sbjct: 170 -VFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLY 228

Query: 448 WWGLGLRSS-----SISFHTPVLVTGLSSH--QIVDVSIGDSHVLALSQYNEVYAWGSNT 500
            +G G   +      +    PV V     +  +I  +S G    +A+S   +VYAWG   
Sbjct: 229 TFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWGKAK 288

Query: 501 MGQCGQDNFSNPVDQPSKV 519
            G+ G  N +N +  P KV
Sbjct: 289 EGRIGLGN-NNDICLPRKV 306



 Score =  102 bits (253), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 30/285 (10%)

Query: 209 CSRPRLQSLPSNIRHI--EAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVP 263
           C RPR      N + I   AG+  +  + + G +  +G+G+   LGL +     LP++V 
Sbjct: 83  CLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGEGFCGQLGLGDRRPHLLPEQVT 142

Query: 264 L----EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN-TL----SQRRPKL 314
           L    +  + ++S   C   H L VT EGEV+SWG+G +G L   N TL     Q  PKL
Sbjct: 143 LGGLEDECVSNMS---CGCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKL 199

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD- 373
           +   L   R   VSAGH HS  + E G LYT+G G  G LGHGDL  +  P  V +  + 
Sbjct: 200 V-DALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEEN 258

Query: 374 ---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE-ALRKFRVRK 429
              +  +S G   ++ +S  G  V++ G    G++G  +   +  P+ ++     F+   
Sbjct: 259 NVRIHQMSAGVDMSMAVSTTG-DVYAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVD 317

Query: 430 VCAGTSFSVALTWDGLVFWW-GLGLRSSSISFHT-----PVLVTG 468
           V  G   S+ +  DG V+   G+G+       +T     PVL++G
Sbjct: 318 VECGYVHSLIIGLDGSVYQCGGVGVDGKDDGQNTGGDGFPVLLSG 362



 Score =  100 bits (249), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 29/277 (10%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGL-YGKRVTQVSAGHSH-SAAVTEDGLLYTWG 347
           + SWGV + G+ GHG+      PKL++G + +G R+ QV+AG       + + G + ++G
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFG 63

Query: 348 EGDHGRLGHGD---------LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
              +G LGHG          L+ R+   L  E   V  VS GE H+  ++ DG  V++ G
Sbjct: 64  TAQYGALGHGYDAGKQLSDCLRPRYIDALKNE--KVICVSAGELHSGCVTADG-DVYTWG 120

Query: 399 SGNLGKLGHEDTGKVTTPKVIE--ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---- 452
            G  G+LG  D      P+ +    L    V  +  G   ++ +T +G VF WGLG    
Sbjct: 121 EGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYGV 180

Query: 453 LRSSSISFHTPV------LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           L + +++   P       LV  L + + V VS G  H + L ++  +Y +GS   G  G 
Sbjct: 181 LDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALGH 240

Query: 507 DNFSNPVDQPSKVVGLEDVCVR--QICAGSLFSIAYT 541
            +     + P KV+  E+  VR  Q+ AG   S+A +
Sbjct: 241 GDLVGQ-EFPVKVMQFEENNVRIHQMSAGVDMSMAVS 276



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 13/179 (7%)

Query: 181 TDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTF 232
           T +     +V++WG    + +LD +      P  Q  P  +          + AG   + 
Sbjct: 161 TLVVTEEGEVFSWGLG-RYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSM 219

Query: 233 LLDSTGGLLVYGKGW---LGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEG 288
           +LD  GGL  +G G    LG  +   Q  P +V   E   V +          + V++ G
Sbjct: 220 VLDEHGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTG 279

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +VY+WG  + G++G GN      P+ +  G    +   V  G+ HS  +  DG +Y  G
Sbjct: 280 DVYAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDGSVYQCG 338



 Score = 44.7 bits (104), Expect = 0.48,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 16/166 (9%)

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV---CAGTSFSVALTWDGLVF 447
           G  + S G    G+ GH D   V+ PK++     + VR V     G    + L   G V 
Sbjct: 1   GSGIASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVL 60

Query: 448 WWGLGLRSSSISFHT----------PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            +G     +    +           P  +  L + +++ VS G+ H   ++   +VY WG
Sbjct: 61  SFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWG 120

Query: 498 SNTMGQCGQDNFSNPVDQPSKVV--GLEDVCVRQICAGSLFSIAYT 541
               GQ G  +   P   P +V   GLED CV  +  G   ++  T
Sbjct: 121 EGFCGQLGLGD-RRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVT 165


>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 14/248 (5%)

Query: 284 VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
           +T  G VYS G   HG+LGHG+TL +  PK+I        V Q++AG S+  AVT+ G++
Sbjct: 231 LTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVV 290

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELS----DVGAVSCGESHTLVLSQDGHTVWSMGS 399
           Y++G G +  LGHG+  +   P  +         V  VS G+ H + L   G  V++ G 
Sbjct: 291 YSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGF-VYTWGK 349

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF---WWGLGL--- 453
           G  G LGH D    T P+ + +L+     +VCA    +  L   G VF   W G G    
Sbjct: 350 GYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGF 409

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
             R  S     P ++  L +H++  +S G  H +A++   +V+ +G N   Q G D    
Sbjct: 410 PDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRG 469

Query: 512 PVDQPSKV 519
            + +P+++
Sbjct: 470 CL-EPTEI 476



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 123/254 (48%), Gaps = 18/254 (7%)

Query: 211 RPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP 263
           RPR    L+ +P   + + AG   T  L  TG +   G    G LG  +T  +P PK + 
Sbjct: 206 RPRFVEALKGVP--CKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIE 263

Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
               I S++      ++VL VT  G VYS+G G +  LGHG   ++  P+ I    + ++
Sbjct: 264 SFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQ--TFRRK 321

Query: 324 ---VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVS-C 379
              V +VSAG  H  A+   G +YTWG+G  G LGHGD   +  P  +  L    AV  C
Sbjct: 322 NLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVC 381

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG---KVTTPKVIEALRKFRVRKVCAGTSF 436
                  +  DG  V+  G    G LG  D G   KV  P+++++LR  RV ++  G   
Sbjct: 382 ARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYH 441

Query: 437 SVALTWDGLVFWWG 450
           +VA+T  G VF +G
Sbjct: 442 TVAVTSQGQVFGFG 455



 Score =  100 bits (249), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 129/268 (48%), Gaps = 22/268 (8%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           H L + S   VYS G    G LGHG   +Q     ++    L   RV QVSA H+H+A +
Sbjct: 122 HTLLI-SNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSL--ARVVQVSASHNHAAYI 178

Query: 338 TEDGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV 394
            E G ++T G+      GH D  +    P  V  L  V    V+ G + T+ L++ GH V
Sbjct: 179 LESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGH-V 237

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKF-RVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G+   G+LGH DT    TPK+IE+      V ++ AG S+ +A+T  G+V+ +G   
Sbjct: 238 YSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGS 297

Query: 451 ---LGLRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
              LG       FH   + T    +  +V VS GD HV+AL     VY WG    G CG 
Sbjct: 298 NFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGK---GYCGA 354

Query: 507 DNFSNPVDQ--PSKVVGLEDVCVRQICA 532
               + +D+  P  +  L+     Q+CA
Sbjct: 355 LGHGDEIDKTLPEPLNSLKSHLAVQVCA 382



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 127/292 (43%), Gaps = 18/292 (6%)

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-RRPKLIMGGLYG 321
           P  A +V +S S    A++L     GEV++ G       GH +T     RP+ +   L G
Sbjct: 160 PSLARVVQVSASHNHAAYIL---ESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEA-LKG 215

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV---S 378
               QV+AG + +  +T  G +Y+ G   HG+LGHGD   R TP ++     +G+V   +
Sbjct: 216 VPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIA 275

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK--FRVRKVCAGTSF 436
            G S+ L ++  G  V+S GSG+   LGH +      P+ I+  R+    V +V AG   
Sbjct: 276 AGPSYVLAVTDSG-VVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEH 334

Query: 437 SVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
            VAL   G V+ WG G          I    P  +  L SH  V V         L    
Sbjct: 335 VVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGG 394

Query: 492 EVYAWGSNTMGQCG--QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
            V+ +G    G  G      S+ V +P  +  L    V QI  G   ++A T
Sbjct: 395 CVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVT 446



 Score = 57.4 bits (137), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  + AG      LDS+G +  +GKG+   LG  +   + LP+  PL +    L+V  C
Sbjct: 324 HVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPE--PLNSLKSHLAVQVC 381

Query: 277 SEAH-VLTVTSEGEVYSWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
           +       +   G V+ +G    G LG    G +    RP+ I+  L   RV+Q+S G  
Sbjct: 382 ARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPR-ILDSLRAHRVSQISTGLY 440

Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
           H+ AVT  G ++ +G+ +  +LGH  L+    PT
Sbjct: 441 HTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPT 474


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 25/281 (8%)

Query: 246 GWLGLAN--TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G LGL +  +TI+P    V     IVSLS    +  HV+  T++GEVY+WG   + +LG+
Sbjct: 61  GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYG--TGPHVVIATADGEVYAWGHNGYSQLGN 118

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G T     P L+   L  KRVT+V+ G  H+ A+T DG +Y WG  + G++G G   ++ 
Sbjct: 119 GTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQP 178

Query: 364 TPTLVTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
           TP  V+       V  ++CG+  ++ +  +G  ++  G    G+LG  + G   TP  I 
Sbjct: 179 TPRRVSSCLQNKVVVNIACGQLCSMAVLDNGE-IYGWGYNCNGQLGLGNNGNQQTPCRIA 237

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-RSSSISFHTPVLVTGLSSHQ 473
           AL+   + +V  G + ++ALT +G V+ WG      LG    S+ +  TP+        +
Sbjct: 238 ALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTPI---NTDKER 294

Query: 474 IVDV-SIGDSHV-LALSQYNEVYAWGSNTMGQCGQDNFSNP 512
           IV+V +   SH   A +Q  +V  W     GQC     ++P
Sbjct: 295 IVEVAACHTSHTSAAKTQSGQVLMW-----GQCRGQAVASP 330



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
            L VT   EV++ G    G LG G+  S   P+ I   L GK++  +S G   H    T 
Sbjct: 43  ALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRI-DVLCGKKIVSLSYGTGPHVVIATA 101

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE--LSD-VGAVSCGESHTLVLSQDGHTVWS 396
           DG +Y WG   + +LG+G      TP LV+   LS  V  V+CG  HT+ L+ DG  V++
Sbjct: 102 DGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGE-VYA 160

Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T    TP+ V   L+   V  +  G   S+A+  +G ++ WG     
Sbjct: 161 WGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNG 220

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL ++  +  TP  +  L    IV V+ G +H LAL+    VYAWG+N+ GQ G  N 
Sbjct: 221 QLGLGNNG-NQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNK 279

Query: 510 SN 511
           SN
Sbjct: 280 SN 281



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 33/285 (11%)

Query: 129 QVDLIRSACLV-----YLILVTLADDNIK---------PLGDRKSSNSNTDIDSTSTPK- 173
           ++ LIR AC+        + VT+ D+             LGD +S+     ID     K 
Sbjct: 26  ELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKI 85

Query: 174 --LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAG 227
             L+Y  G    I+ A  +VY WG N + Q+ +        P L S   L   +  +  G
Sbjct: 86  VSLSYGTGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACG 145

Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP---LEAAIVSLSVSKCSEAHV 281
              T  L + G +  +G    G +G  +T  QP P+RV        +V+++   C +   
Sbjct: 146 SHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIA---CGQLCS 202

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + V   GE+Y WG   +G+LG GN  +Q+ P  I   L G  + QV+ G++H+ A+T++G
Sbjct: 203 MAVLDNGEIYGWGYNCNGQLGLGNNGNQQTPCRI-AALQGVNIVQVACGYAHTLALTDEG 261

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHT 384
            +Y WG   +G+LG G+  ++  PT +    +  V   +C  SHT
Sbjct: 262 FVYAWGANSYGQLGTGNKSNQALPTPINTDKERIVEVAACHTSHT 306


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  115 bits (287), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 99/358 (27%), Positives = 159/358 (44%), Gaps = 32/358 (8%)

Query: 186 AHSKVYTWGCNLHHQI----LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
           A + V  WG     Q+     DE    C    L+  P  +R + +G   +  +   G L 
Sbjct: 3   ASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALE--PYAVRSVVSGSRNSLAICDDGTLF 60

Query: 242 VYG---KGWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
            +G   +G LG    T  + +P +V    A V +  +     H L V  +G  Y+WG  E
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSQVK-ALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKR------VTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           +G+ G      +    L    +  KR      V QV+AG +HS  +T +G +++WG+   
Sbjct: 120 YGQCGEEPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQ--- 176

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
                GD+K    P  V  L +V  ++ G  H L L ++G T+W+ G+   G+LG  DT 
Sbjct: 177 -PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENG-TLWAWGNNEYGQLGTGDTQ 234

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-------SSSISFHTPV 464
             + P  ++ L    +  + AG   S ALT  G V+ WG G         +   S   P 
Sbjct: 235 PRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQ 294

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQD-NFSNPVDQPSKV 519
            V  L+   I+ VS G +H +AL++   ++++G    G+  CG+      P+D P K+
Sbjct: 295 KVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKI 352



 Score =  114 bits (284), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 88/266 (33%), Positives = 131/266 (49%), Gaps = 22/266 (8%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V +WG GE G+LG G T  ++    ++  L    V  V +G  +S A+ +DG L+TWG  
Sbjct: 7   VIAWGSGEDGQLGLG-TNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWN 65

Query: 350 DHGRLGHG-DLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
             G LGH  + K+ + P+ V  L++V  V  + G  H L +   G   ++ G    G+ G
Sbjct: 66  QRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRA-YAWGGNEYGQCG 124

Query: 407 HEDTGK----------VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS 456
            E+ GK          +  PK      K  VR+V AG + SV LT +G V+ WG      
Sbjct: 125 -EEPGKDEMERPLRRDIVIPK--RCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPPG 181

Query: 457 SI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
            I     PV V GL + +++  ++G  H LAL +   ++AWG+N  GQ G  + + P  Q
Sbjct: 182 DIKQISIPVRVQGLENVRLI--AVGAFHNLALEENGTLWAWGNNEYGQLGTGD-TQPRSQ 238

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYT 541
           P  V GL+ + +  I AG   S A T
Sbjct: 239 PIPVQGLDSLTLVDIAAGGWHSTALT 264



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 28/201 (13%)

Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIV 269
           R+Q L  N+R I  G F    L+  G L  +G    G LG  +T  QP  + +P++  + 
Sbjct: 191 RVQGL-ENVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGDT--QPRSQPIPVQG-LD 246

Query: 270 SLSVSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQ 326
           SL++   +    H   +T +GEVY WG GEHG+LG G N  S +     +  L G+ + Q
Sbjct: 247 SLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQ 306

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--------ELSDVG--- 375
           VS G +HS A+T DG ++++G GDHGRLG G   +   P  V         + +D     
Sbjct: 307 VSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPEGQFNDAAEDD 366

Query: 376 -------AVSCGESHTLVLSQ 389
                   V+CG  HTL + +
Sbjct: 367 DGKWVAKVVACGGRHTLAIVE 387



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG-- 450
           TV + GSG  G+LG     +     V+EAL  + VR V +G+  S+A+  DG +F WG  
Sbjct: 6   TVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWN 65

Query: 451 ----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
               LG    + + + P  V  L++ +IV  +IG  H LA+      YAWG N  GQCG+
Sbjct: 66  QRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 507 DNFSNPVDQP-SKVVGLEDVC-----VRQICAGSLFSIAYT 541
           +   + +++P  + + +   C     VRQ+ AG   S+  T
Sbjct: 126 EPGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLT 166


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 163/365 (44%), Gaps = 34/365 (9%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP--------- 263
           S   +I  + AG   T +L +TG +   G   +G  G+     + +P+ VP         
Sbjct: 41  SRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIGEID-ETVPEMVPSLTKVTLRE 99

Query: 264 ---LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLY 320
                A  VSL  S     H++ VT EGE+ + G    G+LGHG           + G  
Sbjct: 100 PSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFA 159

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVS 378
           G RVT+V+  +SH+  VT+D   +T+G   +G+LGHGD  SR  P  +     +G  +V+
Sbjct: 160 GYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVA 219

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           CG  HT+V    G  ++S G  + G+LG E      TP    A     V ++  G   +V
Sbjct: 220 CGVYHTVVSVASG-GLYSFGKNDHGQLGLEGGESRFTPVQHRACTSV-VEQLACGYYHTV 277

Query: 439 ALTWDGLVFWW--------GLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           AL+  G V  +        GLG R S+        + GL   +I+ V+ G  H ++L   
Sbjct: 278 ALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGL---RIIQVACGSYHTISLDDE 334

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPP--SNSA 548
             VY +G N  GQ G     +   +P  V GL    V Q+ AG   ++  T PP    + 
Sbjct: 335 GRVYPFGRNNHGQLGTGTREDAC-RPCFVEGLSQSFVCQVAAGFYHTLCLTGPPLERKAG 393

Query: 549 LSSAF 553
             SAF
Sbjct: 394 HGSAF 398



 Score = 70.5 bits (171), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 26/241 (10%)

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           E E+Y +G    G+LG G+TL +  P L      GK +  V+AG+  +A +T  G +Y+ 
Sbjct: 10  ERELYGFGQNACGELGLGDTLERHTPTLSQTS-RGKDIVGVTAGNELTAVLTNTGEVYSC 68

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDV----------GAVSC-----GESHTLVLSQDG 391
           G    G+ G G++     P +V  L+ V          G VS      G  H +V++++G
Sbjct: 69  GYNSEGQCGIGEIDET-VPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEG 127

Query: 392 HTVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
             + + G  N G+LGH + GK  + P+ +     +RV KV    S +V +T D   + +G
Sbjct: 128 E-LQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFG 186

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                 LG    S S   P  +       ++ V+ G  H +       +Y++G N  GQ 
Sbjct: 187 GNGYGQLGHGDHS-SRSAPAALACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQL 245

Query: 505 G 505
           G
Sbjct: 246 G 246



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 181 TDISVAHSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGG 239
           T +SVA   +Y++G N H Q+ L+    + +  + ++  S +  +  G + T  L   G 
Sbjct: 225 TVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGE 284

Query: 240 LLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           ++ +G+   G LGL +        +VP  A +  + V+ C   H +++  EG VY +G  
Sbjct: 285 VVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVA-CGSYHTISLDDEGRVYPFGRN 343

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
            HG+LG G      RP  +  GL    V QV+AG  H+  +T   L    G G
Sbjct: 344 NHGQLGTGTREDACRPCFVE-GLSQSFVCQVAAGFYHTLCLTGPPLERKAGHG 395



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 23/190 (12%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTL--VTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           LY +G+   G LG GD   RHTPTL   +   D+  V+ G   T VL+  G  V+S G  
Sbjct: 13  LYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGE-VYSCGYN 71

Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRK-------------VCAGTSFSVALTWDGLVF 447
           + G+ G  +  + T P+++ +L K  +R+                G+   V +T +G + 
Sbjct: 72  SEGQCGIGEIDE-TVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQ 130

Query: 448 WWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
             G      LG       +  P  V G + +++  V+   SH + ++  +  + +G N  
Sbjct: 131 TCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGY 190

Query: 502 GQCGQDNFSN 511
           GQ G  + S+
Sbjct: 191 GQLGHGDHSS 200


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 171/399 (42%), Gaps = 88/399 (22%)

Query: 258 LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
           LP R+   + I+ +    C E H   VT +G+V+SWG    G+LGH  + S   PK+I  
Sbjct: 14  LP-RLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKII-D 71

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL---SD- 373
            L    +  ++ G  ++ AV+  G LY WGEG H  LG  + + + +P    +L   SD 
Sbjct: 72  SLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHS-LGFKNNQCQRSPWFPHKLIRTSDG 130

Query: 374 --VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
             V  ++CG+ HT ++S  G  +++ G G  G LGH DT  V  PK +E+LR  RV+ V 
Sbjct: 131 ISVAKIACGQWHTAIVSSTGK-LFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVA 189

Query: 432 AGTSFSVAL-----------------TWD------------------------------- 443
            G   + A+                 TW                                
Sbjct: 190 CGPWHTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQ 249

Query: 444 ---GLVFWWG------LG-LRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNE 492
              G+VF  G      LG  RS S       +V G L +  + D+S G+SHV  L+   +
Sbjct: 250 VSCGVVFTIGSKDHGQLGNPRSDSACI---CMVEGPLKTEFVKDISSGNSHVAVLTMNGK 306

Query: 493 VYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
           V+ WG  T GQ G  ++   +D+  P+ V  LED  V  I   S F+    V   +  +S
Sbjct: 307 VFTWGKGTEGQLGLGDY---LDRTFPTLVEALEDKQVDSIVCSSNFTAVICV---HGEIS 360

Query: 551 SAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIPFCS 589
           S  T +C   R     L   F  +   C+  G    FC+
Sbjct: 361 SKDT-VCSSCR-----LAFRFTRKKHNCYNCGSM--FCN 391


>gi|196010051|ref|XP_002114890.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
 gi|190582273|gb|EDV22346.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
          Length = 697

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 21/264 (7%)

Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
           ++V+++   C +     +T  G + ++G G +G LGHGN      PK I+  L G  +  
Sbjct: 396 SVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNEAAHPK-IVESLIGYEIVN 454

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGAVSCGESHT 384
           VS G SH  A+T +  L+ WG GD+GRLG  + K+   P L+   E     +V CG   +
Sbjct: 455 VSCGASHIMAITAEHELFAWGRGDNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCS 514

Query: 385 LVLSQDGHTVWSMGSGNLGKLGHE--DTGKVTTPKVIE-----ALRKFRVRKVCAGTSFS 437
           +VL  DG  +   GS    KL  +  DTG V     +       L    + +V AGTS +
Sbjct: 515 MVLCCDG-CLLVCGSNRANKLSLDTSDTGLVDEKHSLTRVPSMPLSSLSIEQVAAGTSHT 573

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
             +T DG ++  G      LG   S     +   V+ L+  QI  ++ GD+  +A++  N
Sbjct: 574 AVITEDGKLYTCGVNTYGQLGYEQSKQRV-SAKQVSSLNHKQIKYIACGDAFTIAVTADN 632

Query: 492 EVYAWGSNTMGQCG---QDNFSNP 512
           EVYAWG  + G+ G   + NF  P
Sbjct: 633 EVYAWGKGSRGRLGLGTEKNFVEP 656



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 14/196 (7%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVY 243
           A  +++ WG   + ++        S P L  LP   +   +  G  C+ +L   G LLV 
Sbjct: 467 AEHELFAWGRGDNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVC 526

Query: 244 G-----KGWLGLANTTI---QPLPKRVPLEAAIVSLSVSKCSE--AHVLTVTSEGEVYSW 293
           G     K  L  ++T +   +    RVP    + SLS+ + +   +H   +T +G++Y+ 
Sbjct: 527 GSNRANKLSLDTSDTGLVDEKHSLTRVP-SMPLSSLSIEQVAAGTSHTAVITEDGKLYTC 585

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           GV  +G+LG+  +  QR     +  L  K++  ++ G + + AVT D  +Y WG+G  GR
Sbjct: 586 GVNTYGQLGYEQS-KQRVSAKQVSSLNHKQIKYIACGDAFTIAVTADNEVYAWGKGSRGR 644

Query: 354 LGHGDLKSRHTPTLVT 369
           LG G  K+   P  +T
Sbjct: 645 LGLGTEKNFVEPQRIT 660



 Score = 42.7 bits (99), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 9/147 (6%)

Query: 208 KCSRPRLQSLPSN---IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKR 261
           K S  R+ S+P +   I  + AG   T ++   G L   G    G LG   +  +   K+
Sbjct: 547 KHSLTRVPSMPLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQSKQRVSAKQ 606

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           V        +    C +A  + VT++ EVY+WG G  G+LG G   +   P+ I    Y 
Sbjct: 607 VS-SLNHKQIKYIACGDAFTIAVTADNEVYAWGKGSRGRLGLGTEKNFVEPQRITFNHYN 665

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGE 348
             +  +++ H ++   T   L Y  G+
Sbjct: 666 FEILSLASRHGNTLMSTR--LKYNNGD 690


>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 612

 Score =  115 bits (287), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 28/264 (10%)

Query: 288 GEVYSWGVGEHGKLGH-----GNTLSQRR-----PKLIMGGLYGKRVTQVSAGHSHSAAV 337
           G +YSWG    G++G+      N    R+     PKL+   L    + QVS G+ HS A+
Sbjct: 131 GVLYSWGQNTEGQMGNVYDPKTNNPKHRKIKINFPKLVYP-LKDSIIIQVSCGYQHSVAI 189

Query: 338 TEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           T +G +  WG+    +LG G     S + P  +  + ++  VSCG  HTL L  + + V+
Sbjct: 190 TFNGNVLVWGDNSSSQLGLGINSPNSIYYPVQIPNIQNIINVSCGSEHTLALD-NRNQVY 248

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
           S G+G  G LGH +     +PK+I+  +  +V  +  G   S+ALT  G V+ WG     
Sbjct: 249 SWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSLALTKKGHVYSWGRNEGG 308

Query: 451 -LGLRSSSISFH-----TPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
            LGL    +  +      P  + G L    +  ++ GD+H LAL+Q  +V+ WG N  GQ
Sbjct: 309 QLGLNQDVLKDNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQVFGWGYNINGQ 368

Query: 504 --CGQDNFSNPVDQPSKVVGLEDV 525
              GQ      V +P ++  L+ +
Sbjct: 369 LGLGQQQSDKQVSEPKQIKNLQKI 392



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 110/452 (24%), Positives = 185/452 (40%), Gaps = 75/452 (16%)

Query: 156 DRKSSNSNTDIDSTSTPKLTYN-----------IGDTDISVAHSK-----VYTWGCNLHH 199
           D   +N N   +++S  K   N           I + D S    K     +Y+WG N   
Sbjct: 83  DENKNNENDKTEASSYSKFEKNKPINQSGNIVQILEKDSSTFSKKDAIGVLYSWGQNTEG 142

Query: 200 QILDEVRGKCSRPRLQSLPSN------------IRHIEAGQFCTFLLDSTGGLLVYG--- 244
           Q+ +    K + P+ + +  N            I  +  G   +  +   G +LV+G   
Sbjct: 143 QMGNVYDPKTNNPKHRKIKINFPKLVYPLKDSIIIQVSCGYQHSVAITFNGNVLVWGDNS 202

Query: 245 KGWLGLANTTIQPL--PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
              LGL   +   +  P ++P    I+++S   C   H L + +  +VYSWG GE G LG
Sbjct: 203 SSQLGLGINSPNSIYYPVQIPNIQNIINVS---CGSEHTLALDNRNQVYSWGNGEGGLLG 259

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG------H 356
           H N   Q  PK+I       +V  +  G  HS A+T+ G +Y+WG  + G+LG       
Sbjct: 260 HSNEEIQASPKII-DKFQDLQVEFIICGGLHSLALTKKGHVYSWGRNEGGQLGLNQDVLK 318

Query: 357 GDLKSRHTPTLVT---ELSDVGAVSCGESHTLVLSQDGHTV-WSMG-SGNLGKLGHEDTG 411
            +L     P  +    E   V  ++ G++H+L L+Q+G    W    +G LG LG + + 
Sbjct: 319 DNLYFCCLPEKICGQLEGVFVKQIAAGDAHSLALAQNGQVFGWGYNINGQLG-LGQQQSD 377

Query: 412 K-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF--------------------WWG 450
           K V+ PK I+ L+K   +  C G +    L  + L                      +  
Sbjct: 378 KQVSEPKQIKNLQKIE-KVFCCGLNDQNQLGIEKLPIKIQNTHNQSILNQNINIIDQYKA 436

Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH----VLALSQYNEVYAWGSNTMGQCGQ 506
                ++ + + P  +       ++ +S G +H    VLA +++  V+AWG N  GQ G 
Sbjct: 437 NDNSKNNNNIYIPKRMDCFYQMPVLHLSCGHNHSLAFVLADTKHYMVFAWGMNKHGQLGI 496

Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            +          +  L+D+    +  GS  S+
Sbjct: 497 GDTGQNSSMARPITYLQDIIAYSMACGSYHSL 528



 Score = 44.3 bits (103), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 316 MGGLYGKRVTQVSAGHSHSAAV----TEDGLLYTWGEGDHGRLGHGDL-KSRHTPTLVTE 370
           M   Y   V  +S GH+HS A     T+  +++ WG   HG+LG GD  ++      +T 
Sbjct: 452 MDCFYQMPVLHLSCGHNHSLAFVLADTKHYMVFAWGMNKHGQLGIGDTGQNSSMARPITY 511

Query: 371 LSDVGAVS--CGESHTLVLSQD 390
           L D+ A S  CG  H+L++  D
Sbjct: 512 LQDIIAYSMACGSYHSLLIIND 533


>gi|428162745|gb|EKX31860.1| hypothetical protein GUITHDRAFT_47937, partial [Guillardia theta
           CCMP2712]
          Length = 231

 Score =  115 bits (287), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 12/192 (6%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           +++  C E H + +T EG++Y+WG G  G+LG G   S   P+ +   L  +R+  VSAG
Sbjct: 12  VTMMACGEYHSVCLTEEGDMYAWGRGSDGQLGLGRMESSPVPRFV-SSLGKQRIKWVSAG 70

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVT--------ELSDVGAVSCGE 381
            + + AVTE+G LY WG+    +LG G    R  +PT +         E  ++  V+CG 
Sbjct: 71  WNFTGAVTEEGRLYMWGDNSLLQLGLGRAAPRQLSPTRIMFDPHEGAGEELEIEGVACGF 130

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA-LRKFRVRKVCAGTSFSVAL 440
            H    +++G   WS G G  G+LGH D    + PK I+  L + RVR++  G  F+VAL
Sbjct: 131 GHACCWTREGGG-WSWGFGVRGQLGHGDLLSQSIPKWIKGELEEERVRRMLCGGQFTVAL 189

Query: 441 TWDGLVFWWGLG 452
           T  G V+ WG G
Sbjct: 190 TEGGRVYAWGSG 201



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/157 (36%), Positives = 76/157 (48%), Gaps = 9/157 (5%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKG---WLGLANTTIQPL-PKRV---PLEAAIVSLSV 273
           I+ + AG   T  +   G L ++G      LGL     + L P R+   P E A   L +
Sbjct: 64  IKWVSAGWNFTGAVTEEGRLYMWGDNSLLQLGLGRAAPRQLSPTRIMFDPHEGAGEELEI 123

Query: 274 S--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
               C   H    T EG  +SWG G  G+LGHG+ LSQ  PK I G L  +RV ++  G 
Sbjct: 124 EGVACGFGHACCWTREGGGWSWGFGVRGQLGHGDLLSQSIPKWIKGELEEERVRRMLCGG 183

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
             + A+TE G +Y WG G   R+G G  +    PTLV
Sbjct: 184 QFTVALTEGGRVYAWGSGSKRRMGSGREEDVLVPTLV 220



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 24/210 (11%)

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD- 373
           ++  L  +RVT ++ G  HS  +TE+G +Y WG G  G+LG G ++S   P  V+ L   
Sbjct: 3   VIPSLRDRRVTMMACGEYHSVCLTEEGDMYAWGRGSDGQLGLGRMESSPVPRFVSSLGKQ 62

Query: 374 -VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR--------- 423
            +  VS G + T  ++++G  ++  G  +L +LG    G+   P+ +   R         
Sbjct: 63  RIKWVSAGWNFTGAVTEEGR-LYMWGDNSLLQLG---LGR-AAPRQLSPTRIMFDPHEGA 117

Query: 424 --KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTG-LSSHQIV 475
             +  +  V  G   +   T +G  + WG G+R        +S   P  + G L   ++ 
Sbjct: 118 GEELEIEGVACGFGHACCWTREGGGWSWGFGVRGQLGHGDLLSQSIPKWIKGELEEERVR 177

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +  G    +AL++   VYAWGS +  + G
Sbjct: 178 RMLCGGQFTVALTEGGRVYAWGSGSKRRMG 207



 Score = 49.3 bits (116), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---------LRSSSISFHTPVLV 466
           P+VI +LR  RV  +  G   SV LT +G ++ WG G         + SS +    P  V
Sbjct: 1   PRVIPSLRDRRVTMMACGEYHSVCLTEEGDMYAWGRGSDGQLGLGRMESSPV----PRFV 56

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           + L   +I  VS G +   A+++   +Y WG N++ Q G
Sbjct: 57  SSLGKQRIKWVSAGWNFTGAVTEEGRLYMWGDNSLLQLG 95


>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
          Length = 1384

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 146/337 (43%), Gaps = 54/337 (16%)

Query: 254 TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
           T+   P  +P +  I  ++V      HV+ +T E  V++WG G  G+LGHGN  S   P 
Sbjct: 529 TMALTPIMLPSKTKIRDVAVG---SGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPS 585

Query: 314 LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-- 371
           L+ G L GK + Q   G   S   +++G++ T G+G  G LGHGD  S   P L+  L  
Sbjct: 586 LVEG-LKGKSIIQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLR 644

Query: 372 -------SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
                   DV +V+CG  H  V+  +   V++ G G  G+LG         P+ +     
Sbjct: 645 DQLSLYSVDVVSVACGSHHVCVVGSESE-VFTWGRGKNGRLGLGSEQDFCQPQEVTVPDN 703

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS--------SSISFHTPVL----- 465
             +++   G   ++ LT  G +   G      LGL           +I   T V      
Sbjct: 704 LSIKECHCGRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIF 763

Query: 466 --VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLE 523
             V  L  H++VD+S+G  H   + +   VY +G N+ GQ G  N S   D P +V   E
Sbjct: 764 TPVRELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGN-SKEQDAPIQVKAFE 822

Query: 524 D-----------VCVRQICA-------GSLFSIAYTV 542
           D           V   +IC+       G  +++A TV
Sbjct: 823 DKPAFVCKFLCYVAFSEICSSLQRVRCGESYTVAGTV 859



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 104/277 (37%), Gaps = 73/277 (26%)

Query: 210 SRPRL--------QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGLANTTI 255
           SRPRL         SL S ++  +  G     ++ S   +  +G+G      LG      
Sbjct: 634 SRPRLIEALLRDQLSLYSVDVVSVACGSHHVCVVGSESEVFTWGRGKNGRLGLGSEQDFC 693

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI 315
           QP    VP     +S+    C     L +T  G + + G  E  KLG    L+ R+  L+
Sbjct: 694 QPQEVTVPDN---LSIKECHCGRDGTLLLTDVGSMLACGNNEGNKLG----LNHRQGFLM 746

Query: 316 -MGGLYGK------------------RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            M  ++ K                  RV  +S G  HSA V E G +YT+G+   G+LG 
Sbjct: 747 AMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGT 806

Query: 357 GDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
           G+ K +  P  V    D  A  C     +  S+                           
Sbjct: 807 GNSKEQDAPIQVKAFEDKPAFVCKFLCYVAFSE--------------------------- 839

Query: 417 KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
            +  +L++ R      G S++VA T D  +++WG  L
Sbjct: 840 -ICSSLQRVR-----CGESYTVAGTVDNGLYFWGTRL 870


>gi|225159176|ref|ZP_03725480.1| Alpha-tubulin suppressor and related RCC1 domain-containing
           protein-like protein [Diplosphaera colitermitum TAV2]
 gi|224802228|gb|EEG20496.1| Alpha-tubulin suppressor and related RCC1 domain-containing
           protein-like protein [Diplosphaera colitermitum TAV2]
          Length = 1690

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 150/319 (47%), Gaps = 40/319 (12%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKGW----LGLANTTIQPLPKRVPLEAAIVSLSVS 274
           S+I  + AG    FL  S G  +V+G GW    LG   TT + +P ++  +   +S S+ 
Sbjct: 230 SSIVAVSAGNHSLFL-SSNG--IVWGSGWNDGQLGDGTTTHRSIPVQITSDGVAISASL- 285

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
                H L + ++G  ++ G   +G+LG G  +    P  IM       V  VS G  HS
Sbjct: 286 ----GHSLFLRNDGTAWASGSNYYGQLGDGTKIDSHTPVQIM-----TDVAAVSVGAWHS 336

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
             +  DG  +  G    GRLG G   +R TP  V  + DV A+S G SH+L L  DG T 
Sbjct: 337 LFLKVDGTAWASGYNYLGRLGDGTTTNRSTPVQV--MRDVAAISGGGSHSLFLKSDG-TA 393

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           W+ G    G+LG+  T   +TP  ++ +R   V  + AG+S S+ L  DG    W  G  
Sbjct: 394 WATGYNGSGQLGNGTTTNRSTP--VQVMRD--VVAISAGSSHSLFLKSDGTA--WATGYN 447

Query: 455 SS-------SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
           SS       + +  TPV V       +V +S G SH L L +   V+A GSN  GQ G  
Sbjct: 448 SSGQLGNGTTTNCSTPVQVM----RDVVAISAGSSHSLFLKRDGSVWACGSNEYGQLGDG 503

Query: 507 --DNFSNPVDQPSKVVGLE 523
             DN + PV   +K  G+ 
Sbjct: 504 TTDNRTTPVQVMNKATGIS 522



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 128/277 (46%), Gaps = 27/277 (9%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G G LG    T +  P +V   AA +S         H L + ++G V++ G    G+LG 
Sbjct: 736 GFGQLGDGTRTNRSTPVQVMDGAASIS-----AGGNHSLFLKADGTVWASGYNSDGQLGD 790

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G    +  P  +M       VT VSAG+SHS  +  DG ++  G  + G+LG G    R 
Sbjct: 791 GTKTDRDTPVQVM-----SDVTAVSAGYSHSLFLKRDGTVWAVGSNNFGQLGDGTKTDRS 845

Query: 364 TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
           TP  V  +S V A+S G+SH+L L +DG TVW+ G    G+LG   T   +TP  I    
Sbjct: 846 TP--VQTMSGVMAISAGDSHSLFLKRDG-TVWASGINESGRLGDGTTTNRSTPVQIMG-- 900

Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH 483
              V  + AG S S+ L  DG V  W  G    +   + PV +      ++  +S G SH
Sbjct: 901 --NVAAISAGGSHSLFLKADGTV--WTTGW---TFENYAPVHIM----SEVTAISAGTSH 949

Query: 484 VLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVV 520
            L L      +A G N  GQ G D      D+P + +
Sbjct: 950 SLYLKNDGSAWASGYNYYGQLG-DGTRTKRDEPVQAI 985



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 27/243 (11%)

Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
           +P++  I++  V+    +H L + ++G V++ G    G+LG G   ++  P  +M G   
Sbjct: 703 IPVQ--IMNDMVAVSDNSHSLFLKNDGTVWASGSNGFGQLGDGTRTNRSTPVQVMDG--- 757

Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGE 381
                +SAG +HS  +  DG ++  G    G+LG G    R TP  V  +SDV AVS G 
Sbjct: 758 --AASISAGGNHSLFLKADGTVWASGYNSDGQLGDGTKTDRDTPVQV--MSDVTAVSAGY 813

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           SH+L L +DG TVW++GS N G+LG       +TP  ++ +    V  + AG S S+ L 
Sbjct: 814 SHSLFLKRDG-TVWAVGSNNFGQLGDGTKTDRSTP--VQTMSG--VMAISAGDSHSLFLK 868

Query: 442 WDGLVFWWGLGLRSS-------SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
            DG V  W  G+  S       + +  TPV + G     +  +S G SH L L     V+
Sbjct: 869 RDGTV--WASGINESGRLGDGTTTNRSTPVQIMG----NVAAISAGGSHSLFLKADGTVW 922

Query: 495 AWG 497
             G
Sbjct: 923 TTG 925



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 25/233 (10%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L +  +G  ++ G    G+LG G T ++  P  +M     + V  +S G SHS  +  
Sbjct: 335 HSLFLKVDGTAWASGYNYLGRLGDGTTTNRSTPVQVM-----RDVAAISGGGSHSLFLKS 389

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG  +  G    G+LG+G   +R TP  V  + DV A+S G SH+L L  DG T W+ G 
Sbjct: 390 DGTAWATGYNGSGQLGNGTTTNRSTPVQV--MRDVVAISAGSSHSLFLKSDG-TAWATGY 446

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR----- 454
            + G+LG+  T   +TP  ++ +R   V  + AG+S S+ L  DG V  W  G       
Sbjct: 447 NSSGQLGNGTTTNCSTP--VQVMRD--VVAISAGSSHSLFLKRDGSV--WACGSNEYGQL 500

Query: 455 --SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
              ++ +  TPV V     ++   +S G+ H L        +A GSN  G  G
Sbjct: 501 GDGTTDNRTTPVQVM----NKATGISAGNQHSLFQRSDGTAWASGSNGSGALG 549



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 16/194 (8%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKC 276
           ++  I  G   +  L S G     G    G LG   TT +  P +V  +   +S      
Sbjct: 373 DVAAISGGGSHSLFLKSDGTAWATGYNGSGQLGNGTTTNRSTPVQVMRDVVAIS-----A 427

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
             +H L + S+G  ++ G    G+LG+G T +   P  +M     + V  +SAG SHS  
Sbjct: 428 GSSHSLFLKSDGTAWATGYNSSGQLGNGTTTNCSTPVQVM-----RDVVAISAGSSHSLF 482

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
           +  DG ++  G  ++G+LG G   +R TP  V  ++    +S G  H+L    DG T W+
Sbjct: 483 LKRDGSVWACGSNEYGQLGDGTTDNRTTPVQV--MNKATGISAGNQHSLFQRSDG-TAWA 539

Query: 397 MGSGNLGKLGHEDT 410
            GS   G LG   T
Sbjct: 540 SGSNGSGALGDGTT 553



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 28/216 (12%)

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
           +SHS  +  DG ++  G    G+LG G   +R TP  V  +    ++S G +H+L L  D
Sbjct: 717 NSHSLFLKNDGTVWASGSNGFGQLGDGTRTNRSTPVQV--MDGAASISAGGNHSLFLKAD 774

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G TVW+ G  + G+LG        TP  ++ +    V  V AG S S+ L  DG V  W 
Sbjct: 775 G-TVWASGYNSDGQLGDGTKTDRDTP--VQVMSD--VTAVSAGYSHSLFLKRDGTV--WA 827

Query: 451 LGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
           +G  +       +     TPV     +   ++ +S GDSH L L +   V+A G N  G+
Sbjct: 828 VGSNNFGQLGDGTKTDRSTPV----QTMSGVMAISAGDSHSLFLKRDGTVWASGINESGR 883

Query: 504 CGQDNFSNPVDQPSKVVGLEDVCVRQICAG---SLF 536
            G    +N    P +++G     V  I AG   SLF
Sbjct: 884 LGDGTTTNR-STPVQIMG----NVAAISAGGSHSLF 914


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 26/352 (7%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCS 277
            N+R +  G   T  +   G +   G   LG L +   +  P++V    A + ++VS C 
Sbjct: 34  KNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKPEQVGALDAQIIVAVS-CG 92

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           EAH L +  +G+V+SWG   +G++G        R    +  L   ++ QV+ GH HS A+
Sbjct: 93  EAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLAL 152

Query: 338 TEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV 394
           ++D  +++WG+  +G+LG G ++K    P  +  LS +    ++ G  H+  L+  G  +
Sbjct: 153 SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISG-AI 211

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           +  G    G+LG  D      P ++++LR  ++  +C G   + ALT +G VF +G G  
Sbjct: 212 FGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 271

Query: 453 --LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQD- 507
             L  +S +    P  V  L    +  ++ G  H LA       +Y++G    GQ G   
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 508 --NFSNPVDQPSKVVGLED-----------VCVRQICAGSLFSIAYTVPPSN 546
             N  +P       +  ED            C+++I +G   S A+ +   N
Sbjct: 332 TINRKSPFTVKGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQSFAHYITIQN 383



 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 119/265 (44%), Gaps = 26/265 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  RR    +     K V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFIN----KNVRDVGCGSRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L    + AVSCGE+HTL L+  G  V+S G    G++
Sbjct: 60  CNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQ-VFSWGHAVYGQI 116

Query: 406 GHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           G     + +  P+ I++L   ++ +V  G   S+AL+ D  +F WG      LGL     
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ--P 516
               P  +  LS      ++ G  H  AL+    ++ WG N  GQ G    ++  D+  P
Sbjct: 177 KECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG---LTDETDRNVP 233

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           + +  L    +  IC G   + A T
Sbjct: 234 ALLKSLRSQKIIHICCGEDHTAALT 258



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V++WG  ++ QI L         PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL     +    R     + +  +       H   +T  G ++ WG  + G+L
Sbjct: 163 QNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLTDETDRNVPAL-LKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HTL        ++S G G  G+LG   T    +P  +
Sbjct: 282 EVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 173/422 (40%), Gaps = 80/422 (18%)

Query: 206 RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQP--LPKRV 262
           + K +   LQ     +    AG   T  +   G +  +G    G L N T +   +P RV
Sbjct: 29  KNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRV 88

Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
                +V++S       H L +  +G V+ WG   H   G   +   R     +     K
Sbjct: 89  KGLKDVVAVS---AGTFHSLALKKDGSVWIWG---HTNYGQRKSDVYRDFTTPVKVKELK 142

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGES 382
            +  ++AG   S AV  DG ++ WG  +HG LG G LK    P  V  L DV AVS G  
Sbjct: 143 NIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLY 202

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGH----------------------------------- 407
           H+L L +DG TVWS G    G+LG+                                   
Sbjct: 203 HSLALKRDG-TVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNK 261

Query: 408 ------------EDTGKVTTPKVIEALRKF-RVRKVCAGTSFSVALTWDGLVFWWG---L 451
                       E  GK+    +   +R   +V  + AG   S+AL  DG V+ WG    
Sbjct: 262 DGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSY 321

Query: 452 GLRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
           G+  S++  H+  PV V GL    +V V+ G  H +AL++   ++AWG+N  GQ G++N 
Sbjct: 322 GVLGSNVGEHSFLPVQVKGL--KNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENN 379

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS-------------NSALSSAFTPL 556
           S  ++ P KV  L++V    I AG   ++A     +             N    S++ P 
Sbjct: 380 SFSLNLPYKVKWLDNVVA--IAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPT 437

Query: 557 CV 558
           CV
Sbjct: 438 CV 439



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 122/246 (49%), Gaps = 17/246 (6%)

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           L + N+ ++   K + G  +  +V    AG  H+ A+ +DG ++ WG    G+LG+G  K
Sbjct: 23  LSNANSKNKENSKELQGENF--KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYK 80

Query: 361 SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
               P  V  L DV AVS G  H+L L +DG +VW  G  N G+   +     TTP  ++
Sbjct: 81  DSCIPVRVKGLKDVVAVSAGTFHSLALKKDG-SVWIWGHTNYGQRKSDVYRDFTTPVKVK 139

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
            L+   +  + AG  FS+A+  DG V+ WG      LG+ S   S   PV V GL    +
Sbjct: 140 ELK--NIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPS-AVPVKVKGL--KDV 194

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVVGLEDVCVRQICAG 533
           V VS G  H LAL +   V++WG N  G+ G     +  V  P +V GL DV    I AG
Sbjct: 195 VAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIA--ISAG 252

Query: 534 SLFSIA 539
              SIA
Sbjct: 253 GFHSIA 258



 Score =  105 bits (262), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 171/414 (41%), Gaps = 84/414 (20%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH------IEAGQFCTFLLDSTGGLLVY 243
           V+ WG  +      E  GK     +   P  IR       I AG   +  L   G + V+
Sbjct: 265 VWIWGGGII-----EKNGKIDNSYI---PVRIRWLNKVVAIAAGYRHSIALKDDGTVWVW 316

Query: 244 GKGWLGLANTTIQP---LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           G    G+  + +     LP +V     +V+++  +    H + +T  G +++WG    G+
Sbjct: 317 GHNSYGVLGSNVGEHSFLPVQVKGLKNVVAVAAGRL---HSVALTKNGTIWAWGNNAFGQ 373

Query: 301 LGH-GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG   N+ S   P  +    +   V  ++AG SH+ A+  DG +++WG  + G+LG+G  
Sbjct: 374 LGRENNSFSLNLPYKVK---WLDNVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTY 430

Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG--------------------- 398
           KS + PT V  L+    V  G  H+L + +DG TVW  G                     
Sbjct: 431 KSSYIPTCVKGLNKAVLVEAGSQHSLAVDKDG-TVWVWGFIESVWSEKNTKDILSPLPIK 489

Query: 399 ----------------------SGNLGKLGHE-------DTGKVTTPKVIEALRKFRVRK 429
                                  GN+   G++       D+   +  K+I       VR 
Sbjct: 490 IGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRS 549

Query: 430 VCAGTSFSVALTWDGLVFWWG---LGLRSSSISF-HTPVLVTGLSSHQIVDVSIGDSHVL 485
           + AG   S+A+  DG V+ WG   L  +   ++F   PV + GLS   +V V+ G  H L
Sbjct: 550 IAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFSEKPVKIKGLSG--VVKVAAGKYHSL 607

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           AL +   V++WG N  GQ G          P +V GL +V    I AG   S+A
Sbjct: 608 ALKKDGTVWSWGYNAYGQLGNGTRETSF-VPVRVKGLNNVVA--IAAGDYHSMA 658



 Score = 95.1 bits (235), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 64/364 (17%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG   + Q   +V    + P       NI  I AG   +  + S G +  +G    G
Sbjct: 113 VWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172

Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG---- 302
            LG+ +     +P +V     +V++S       H L +  +G V+SWG  E G+LG    
Sbjct: 173 ELGIGSLKPSAVPVKVKGLKDVVAVS---AGLYHSLALKRDGTVWSWGYNEDGELGNRPT 229

Query: 303 -------------------------HGNTLSQRRPKLIMGG------------------L 319
                                    H   L++     I GG                   
Sbjct: 230 EDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIR 289

Query: 320 YGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSC 379
           +  +V  ++AG+ HS A+ +DG ++ WG   +G LG    +    P  V  L +V AV+ 
Sbjct: 290 WLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLKNVVAVAA 349

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSV 438
           G  H++ L+++G T+W+ G+   G+LG E+    +  P  ++ L    V  + AG S ++
Sbjct: 350 GRLHSVALTKNG-TIWAWGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIAAGGSHTL 406

Query: 439 ALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
           A+  DG V+ WG   +      +  S + P  V GL  ++ V V  G  H LA+ +   V
Sbjct: 407 AIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGL--NKAVLVEAGSQHSLAVDKDGTV 464

Query: 494 YAWG 497
           + WG
Sbjct: 465 WVWG 468



 Score = 90.1 bits (222), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L V ++G V+SWG             S++  K+   GL G  V +V+AG  HS A+ +
Sbjct: 556 HSLAVRTDGTVWSWGDTNLDNKEKYLNFSEKPVKIK--GLSG--VVKVAAGKYHSLALKK 611

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
           DG +++WG   +G+LG+G  ++   P  V  L++V A++ G+ H++ L +DG TVW  GS
Sbjct: 612 DGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNNVVAIAAGDYHSMALKKDG-TVWVWGS 670

Query: 400 GNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
              G+LG  +    T P  +E L    V  + AG + SVAL  DG V+ WG+
Sbjct: 671 NIRGQLGRRNIEFSTVPLKVEKLD--NVVAIAAGDTHSVALKKDGTVWVWGI 720



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 167/413 (40%), Gaps = 80/413 (19%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---G 246
           V+ WG N +  +   V      P       N+  + AG+  +  L   G +  +G    G
Sbjct: 313 VWVWGHNSYGVLGSNVGEHSFLPVQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372

Query: 247 WLGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            LG  N +    LP +V     +V+++      +H L +  +G V+SWG    G+LG+G 
Sbjct: 373 QLGRENNSFSLNLPYKVKWLDNVVAIA---AGGSHTLAIKRDGTVWSWGANNKGQLGNGT 429

Query: 306 TLSQRRPKLIMG-----------------------GLYG--------------------- 321
             S   P  + G                        ++G                     
Sbjct: 430 YKSSYIPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIK 489

Query: 322 ----KRVTQVSAGHSHSAAVTEDGLLYTWGEGD---HGRLGHGDLKSRHTPTLVTELSDV 374
                 +T+++ G  +   + +DG +  WG G+     +     + S      +  + +V
Sbjct: 490 IGKLNDITEIAGGLDYILVLRKDGNI--WGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNV 547

Query: 375 GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
            +++ G  H+L +  DG TVWS G  NL     +       P  I+ L    V KV AG 
Sbjct: 548 RSIAAGYFHSLAVRTDG-TVWSWGDTNLDNK-EKYLNFSEKPVKIKGLSG--VVKVAAGK 603

Query: 435 SFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
             S+AL  DG V+ WG      LG  +   SF  PV V GL  + +V ++ GD H +AL 
Sbjct: 604 YHSLALKKDGTVWSWGYNAYGQLGNGTRETSF-VPVRVKGL--NNVVAIAAGDYHSMALK 660

Query: 489 QYNEVYAWGSNTMGQCGQDN--FSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           +   V+ WGSN  GQ G+ N  FS     P KV  L++V    I AG   S+A
Sbjct: 661 KDGTVWVWGSNIRGQLGRRNIEFSTV---PLKVEKLDNVVA--IAAGDTHSVA 708



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 148/332 (44%), Gaps = 50/332 (15%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--KGW 247
           V++WG N   Q+ +        P      +    +EAG   +  +D  G + V+G  +  
Sbjct: 414 VWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLVEAGSQHSLAVDKDGTVWVWGFIESV 473

Query: 248 LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
               NT   + PLP ++     I  ++       ++L +  +G ++          G GN
Sbjct: 474 WSEKNTKDILSPLPIKIGKLNDITEIA---GGLDYILVLRKDGNIW----------GCGN 520

Query: 306 TLSQRR---------PKLI-MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
               R+          KLI +  +  K V  ++AG+ HS AV  DG +++WG+ +     
Sbjct: 521 DFYFRKFTDSSVSSVTKLIRLDNI--KNVRSIAAGYFHSLAVRTDGTVWSWGDTNL---- 574

Query: 356 HGDLKSRH-----TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
             D K ++      P  +  LS V  V+ G+ H+L L +DG TVWS G    G+LG+   
Sbjct: 575 --DNKEKYLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDG-TVWSWGYNAYGQLGNGTR 631

Query: 411 GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSS----SISFHT-PVL 465
                P  ++ L    V  + AG   S+AL  DG V+ WG  +R      +I F T P+ 
Sbjct: 632 ETSFVPVRVKGLN--NVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLK 689

Query: 466 VTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           V  L +  +V ++ GD+H +AL +   V+ WG
Sbjct: 690 VEKLDN--VVAIAAGDTHSVALKKDGTVWVWG 719


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  115 bits (287), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 175/372 (47%), Gaps = 45/372 (12%)

Query: 208 KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW---LGLA----NTTIQP-LP 259
           K   P L S  SNI  I  G   ++ +D+   +  +G      LGL+    N   Q  +P
Sbjct: 17  KVQTPHLISDISNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIP 76

Query: 260 KRVPLEAAIVSLSVSKCSE-----AHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRPK 313
           +++ +   +  LS  K +       H    ++E  +VY WG+GE+GKLG+  +   + P+
Sbjct: 77  EQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPE 136

Query: 314 LIMG-----GLYGKRVTQVSAGHSHSAAVTED---------GLLYTWGEGDHGRLGHGDL 359
           +  G     G+  + ++++S G +H+ AV +            LY WG     +LG    
Sbjct: 137 IFNGLKQPEGIQWE-ISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTG 195

Query: 360 KSRHTPTLVTELS------DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGK 412
           K+ +    + E+S      +V +V      T+ + + G  ++S G G   +LG++ +   
Sbjct: 196 KTDYVNQPL-EMSPDYWEGNVESVKACSDFTIAIDKQGR-IFSWGKGGFNRLGYKAEIVN 253

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
              P  IE+L K ++ +   G+  S A+T +G ++ WG      LG   +      P  V
Sbjct: 254 QKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIF-PKEV 312

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             L +  IV V+ G+ H LALS+ NE+++WG N+ GQ G+ + +     P K+   ED  
Sbjct: 313 QALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKS 372

Query: 527 VRQICAGSLFSI 538
           ++QI  GS  S+
Sbjct: 373 IKQIACGSKHSL 384



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 5/182 (2%)

Query: 272 SVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGH 331
           SV  CS+   + +  +G ++SWG G   +LG+   +  ++  L +  L  +++ Q S G 
Sbjct: 217 SVKACSD-FTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESLSKQQIIQFSLGS 275

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
            HSAA+T +G LYTWG   +G+LGHG  K+   P  V  L +  + +V+CGE HTL LS+
Sbjct: 276 FHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSK 335

Query: 390 DGHTVWSMGSGNLGKLGHEDTG-KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
           + + ++S G  + G+LG      K + PK I       ++++  G+  S+ L  DG V+ 
Sbjct: 336 N-NELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKSIKQIACGSKHSLVLLQDGTVYS 394

Query: 449 WG 450
           WG
Sbjct: 395 WG 396



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)

Query: 187 HSKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYG 244
           + ++YTWG + + Q+   + +       +Q+L +  I  +  G+  T  L     L  +G
Sbjct: 284 NGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWG 343

Query: 245 ---KGWLGLANTTIQPL-PKRVPL--EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
               G LG A+  ++   PK++    + +I  ++   C   H L +  +G VYSWG  ++
Sbjct: 344 LNSSGQLGRASENLKSSDPKKISFFEDKSIKQIA---CGSKHSLVLLQDGTVYSWGSNQY 400

Query: 299 GKLG 302
           G+LG
Sbjct: 401 GQLG 404


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  115 bits (287), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 20/240 (8%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHS 334
           C   H + +T EG V+ WG+G  G LG+G       P  I + GL+     +++AG  HS
Sbjct: 306 CGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGLF---FNEIAAGAYHS 362

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS----DVGAVSCGESHTLVLSQD 390
            A+ ++  +Y WG  + G+LG G+ +++  P  +T           + CG+ H+  ++ +
Sbjct: 363 LALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTN 422

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
              +++ G+G+  +LGH        PK IE L+   V  V  GT  S+ +T +G V+ WG
Sbjct: 423 KE-LYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWG 481

Query: 451 ------LGLRSSSISFHTPVLVTGLSSHQIVDVSI-----GDSHVLALSQYNEVYAWGSN 499
                 LG+ +      T     GL S    D S      G SH L+LS+   +Y WGSN
Sbjct: 482 SSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGSN 541



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVS 274
           +L      I  G   T  L   G + ++G G  G L N  +  L     ++ + +  +  
Sbjct: 296 ALKQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGLFFNEI 355

Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS---AGH 331
                H L +    +VY WGV   G+LG GN  +Q  PK +    + ++  Q      G 
Sbjct: 356 AAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLT--FFDRKKIQCQYLYCGD 413

Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQ 389
            HSA +T +  LYTWG GD+ RLGHG L     P  +  L DV    V+ G  H+L ++ 
Sbjct: 414 QHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITN 473

Query: 390 DGHTVWSMGSGNLGKLGH--EDTGKVTTPKVI----EALRKFRVRKVCAGTSFSVALTWD 443
           +G  V++ GS     LG   +     T P+ +    ++ R     +V AGTS S++L+ +
Sbjct: 474 EGF-VYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSEN 532

Query: 444 GLVFWWG------LGLR 454
           G ++ WG      LG+R
Sbjct: 533 GHLYVWGSNKNSLLGVR 549



 Score = 67.8 bits (164), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 27/201 (13%)

Query: 231 TFLLDSTGGLLVYGKGWLGL-------ANTTIQPLPKRVP----LEAAIVSLSVS----- 274
           T+ +D+TG L   G    G+            Q +P++ P     E +   + +      
Sbjct: 629 TYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNT 688

Query: 275 -----KCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVS 328
                 C   H + VT++G  Y WG  ++ +LG G  +     P L+ G +  K +    
Sbjct: 689 IIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAI 748

Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT---PTLVTELSDVGAVSCGESHTL 385
            G   SA +T+ G ++++G  + G LGH +LK+ +    P ++ ++  +  ++C      
Sbjct: 749 TGEKFSALLTDQGEVWSFGTSEFGVLGH-ELKNFYVIMEPRMINDIPSMINLACSNQTMF 807

Query: 386 VLSQDGHTVWSMGSGNLGKLG 406
            + Q    +W+ G+   G+LG
Sbjct: 808 AIDQK-QQLWAWGNNQFGQLG 827



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 91/403 (22%), Positives = 143/403 (35%), Gaps = 56/403 (13%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQF-CTFL---------L 234
             +++VY WG N   Q+             Q LP  +   +  +  C +L         +
Sbjct: 366 AKNNQVYGWGVNNRGQL------GIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACI 419

Query: 235 DSTGGLLVYGKG---WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
            +   L  +G G    LG      +  PK++ +   +  L V+     H L +T+EG VY
Sbjct: 420 TTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVA-LGTIHSLCITNEGFVY 478

Query: 292 SWGVGEHGKLG------HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYT 345
           +WG  +   LG         TL QR   L+          QV+AG SHS +++E+G LY 
Sbjct: 479 AWGSSKDSVLGMPTQQYKDQTLPQR-VGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYV 537

Query: 346 WGEGDHGRLGHGDLKSRHT--PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
           WG   +  LG       HT  P  V +  D+   SC E   L  +        M    L 
Sbjct: 538 WGSNKNSLLGVRLQGQEHTCVPQKVEQSEDLEK-SCIEK-ALFFNLKKEEQQMMKDEKLV 595

Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRS-------- 455
                   K      +    + + +    GT  +  +   G ++  G   +         
Sbjct: 596 TFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHK 655

Query: 456 -------------SSISFH---TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
                          I F    TP+ +    +  I  +S   +H +A++     Y WGSN
Sbjct: 656 KQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSN 715

Query: 500 TMGQCGQDNFSNPVDQPSKVVG-LEDVCVRQICAGSLFSIAYT 541
              Q G    S+ V  P  + G +E   +     G  FS   T
Sbjct: 716 QYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSALLT 758



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 12/173 (6%)

Query: 377 VSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           + CG  HT+ L+++G   +W MGS   G LG+     + TP  I+    F   ++ AG  
Sbjct: 304 IVCGHHHTMALTEEGAVFIWGMGSQ--GCLGNGRVDDLETPTQIDISGLF-FNEIAAGAY 360

Query: 436 FSVALTWDGLVFWWGLGLRS-----SSISFHTPVLVTGLSSHQIV--DVSIGDSHVLALS 488
            S+AL  +  V+ WG+  R      +  +   P  +T     +I    +  GD H   ++
Sbjct: 361 HSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACIT 420

Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
              E+Y WG+    + G     + ++ P K+  L+DV V  +  G++ S+  T
Sbjct: 421 TNKELYTWGNGDYYRLGHGMLLDEME-PKKIEILQDVYVLDVALGTIHSLCIT 472



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 54/184 (29%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVT---ELSDVGAVSCGE 381
           +S  ++H  AVT  G  Y WG   + +LG G  +S H  TP L+    E   +     GE
Sbjct: 693 ISCQYNHCIAVTAKGNAYCWGSNQYNQLGLG-FQSDHVFTPILLEGAIEQKVIIMAITGE 751

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
             + +L+  G  VWS G+   G LGHE             L+ F V              
Sbjct: 752 KFSALLTDQGE-VWSFGTSEFGVLGHE-------------LKNFYV-------------- 783

Query: 442 WDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
                                P ++  + S  +++++  +  + A+ Q  +++AWG+N  
Sbjct: 784 ------------------IMEPRMINDIPS--MINLACSNQTMFAIDQKQQLWAWGNNQF 823

Query: 502 GQCG 505
           GQ G
Sbjct: 824 GQLG 827


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 170/385 (44%), Gaps = 48/385 (12%)

Query: 190 VYTWGCNLHHQI----LDEVRGKCSRPRLQSLPS----NIRHIEAGQFCTFLLDSTGGLL 241
           V++WGC    Q+    L +     S PR   +P+     IR I  G   T +L   G ++
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPR--EVPALAGKQIREISCGLRHTCVLLRDGTVM 60

Query: 242 VYG---KGWLGLANTTIQPLP----KRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           + G   +G LG      Q  P      VP    +V   VS C   H L VT  G+V  WG
Sbjct: 61  MCGANDRGQLG------QDRPGSELAHVPATETLVITQVS-CGNDHTLAVTDRGQVLGWG 113

Query: 295 VGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
             + G+ G   G++  +R+P+ +   L   +V QV+ G  HS A+T DG ++ WG+   G
Sbjct: 114 RNDRGQCGLSTGDSEDKRKPRFLKS-LSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFG 172

Query: 353 RLGHGDLKS---RHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH 407
           +LG G       R  P  ++ L  V    ++CG  H+  LS  G  V+  G  N G+LG 
Sbjct: 173 QLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSG-AVFGWGKNNCGQLGL 231

Query: 408 EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHT 462
             T    +P  ++ L+  +V+ +  G +++  LT  G +F +G G        S  +   
Sbjct: 232 GTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVN 291

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQDNFSN---------P 512
           P  V G    +I  V+ G  H L L  +    ++ G  + GQ G DN S+         P
Sbjct: 292 PRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGP 351

Query: 513 VDQPSKVVGLEDVCVRQICAGSLFS 537
            + PS   G  +    +   GS+F+
Sbjct: 352 WEAPSSTEGCSNGEESRSIIGSIFA 376



 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 15/266 (5%)

Query: 290 VYSWGVGEHGKLG---HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
           V+SWG  + G+LG    G+ +        +  L GK++ ++S G  H+  +  DG +   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
           G  D G+LG     S       TE   +  VSCG  HTL ++  G  V   G  + G+ G
Sbjct: 63  GANDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQ-VLGWGRNDRGQCG 121

Query: 407 --HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW--------GLGLRSS 456
               D+     P+ +++L   +V +V  G+  S+ALT DG +F W        G+G    
Sbjct: 122 LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGR 181

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
           ++    P  ++ L    I  ++ G  H  ALS    V+ WG N  GQ G     + V  P
Sbjct: 182 TLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVS-P 240

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTV 542
           + +  L+   V+ I  G  ++   T 
Sbjct: 241 TPLKNLKTKQVKYIACGQNYTAILTA 266



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 137/302 (45%), Gaps = 41/302 (13%)

Query: 133 IRSACLVY---LILVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVA--- 186
           +R  C++     +++  A+D  + LG  +  +    + +T T  +T      D ++A   
Sbjct: 47  LRHTCVLLRDGTVMMCGANDRGQ-LGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTD 105

Query: 187 HSKVYTWGCNLHHQILDEVRGKCS----------RPR-LQSLPS-NIRHIEAGQFCTFLL 234
             +V  WG N         RG+C           +PR L+SL S  +  +  G   +  L
Sbjct: 106 RGQVLGWGRN--------DRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMAL 157

Query: 235 DSTGGLLVYGK---GWLGLA---NTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTS 286
              G +  +G    G LG+     T  +  P+++   +++  + + +  C   H   ++ 
Sbjct: 158 TRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQL---SSLPGVPIRRLACGGWHSFALSV 214

Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
            G V+ WG    G+LG G T  +  P  +   L  K+V  ++ G +++A +T  G L+ +
Sbjct: 215 SGAVFGWGKNNCGQLGLGTTEDRVSPTPLKN-LKTKQVKYIACGQNYTAILTASGGLFLF 273

Query: 347 GEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G+G  G+LGHG   +   P  V     S++  V+CG  HTLVL       +S+G G+ G+
Sbjct: 274 GQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQ 333

Query: 405 LG 406
           LG
Sbjct: 334 LG 335



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
           ++LS   C  A  L     G ++ +G G  G+LGHG+  ++  P+ +   L G  +TQV+
Sbjct: 435 MALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFL-GNEITQVA 493

Query: 329 AGHSHSAAVT-EDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
            G  H+  +    G  Y+ G+G  G+LG  +  S+   +LV
Sbjct: 494 CGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLV 534



 Score = 48.9 bits (115), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMG 398
           G L+ +G+G  G+LGHG   +   P  V +   +++  V+CG  HTLVL       +S+G
Sbjct: 454 GGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSLG 513

Query: 399 SGNLGKLG 406
            G+ G+LG
Sbjct: 514 QGSKGQLG 521


>gi|403369334|gb|EJY84511.1| hypothetical protein OXYTRI_17643 [Oxytricha trifallax]
          Length = 1141

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 38/343 (11%)

Query: 181 TDISVAHSKVYTWG-----CNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAG-QFCTFLL 234
           T+ +   +++Y WG       +HH            P++ S    I +I  G +   F+ 
Sbjct: 16  TEDNAEFTEIYVWGRVGLEQTIHHM-----------PKICSFNIVINYIACGDEHTAFIA 64

Query: 235 DSTGGLLVYG---KGWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEV 290
           +  G +   G    G LG+   T++     VP L   I  +    C   H + +  +GE+
Sbjct: 65  EQVGHVYCMGSNADGKLGIGEKTLKS--SNVPCLVEGIQDIVQVACGSQHTMALNRKGEI 122

Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
           Y+WG G +G LG G+     +P++I   L  +R+  ++AG+ HS  + E+  +Y  GE  
Sbjct: 123 YAWGGGFYGALGLGDARMCDKPQIIQA-LQHERIVDIAAGNRHSLFLAENQRVYGCGESK 181

Query: 351 HGRLGHGDLKSRH---TPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            G+LG G         +P  +T LS  G   V CG+ H+L L+     V+S G  + G+L
Sbjct: 182 AGQLGLGQGNQHDRILSPQSITALSGQGVKKVCCGKFHSLFLTH-SKEVFSTGGNSFGQL 240

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSI---SFHT 462
           G  +   +  P+ I+ L K  V ++ A   +S A+T    +F WG G+    +     H 
Sbjct: 241 GTGNQSNLYVPEKIKNLSK--VNQISA-WQYSAAITEQDELFVWGTGIFGEYLIPTQQHF 297

Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           P       + Q   + IG S  + +   N+ Y WG+NT  + G
Sbjct: 298 PK--DKCQTSQFKSIQIGGSFSVLIDHQNKAYVWGANTNNEIG 338



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 120/256 (46%), Gaps = 26/256 (10%)

Query: 289 EVYSWG-VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTW 346
           E+Y WG VG    + H        PK+    +    +  ++ G  H+A + E  G +Y  
Sbjct: 24  EIYVWGRVGLEQTIHH-------MPKICSFNIV---INYIACGDEHTAFIAEQVGHVYCM 73

Query: 347 GEGDHGRLGHGD--LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
           G    G+LG G+  LKS + P LV  + D+  V+CG  HT+ L++ G  +++ G G  G 
Sbjct: 74  GSNADGKLGIGEKTLKSSNVPCLVEGIQDIVQVACGSQHTMALNRKGE-IYAWGGGFYGA 132

Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF--------WWGLGLRSS 456
           LG  D      P++I+AL+  R+  + AG   S+ L  +  V+          GLG  + 
Sbjct: 133 LGLGDARMCDKPQIIQALQHERIVDIAAGNRHSLFLAENQRVYGCGESKAGQLGLGQGNQ 192

Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
                +P  +T LS   +  V  G  H L L+   EV++ G N+ GQ G  N SN +  P
Sbjct: 193 HDRILSPQSITALSGQGVKKVCCGKFHSLFLTHSKEVFSTGGNSFGQLGTGNQSN-LYVP 251

Query: 517 SKVVGLEDVCVRQICA 532
            K+  L    V QI A
Sbjct: 252 EKIKNLSK--VNQISA 265


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V +++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVSIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score =  100 bits (250), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 18/234 (7%)

Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTE 370
           PK  M G       QV+ G  H+ A+ +DG ++TWG   +G+LG G+       P  +  
Sbjct: 104 PKKSMEGF-----VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEG 158

Query: 371 LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
           L DV  V+ G  H+L L +DG TVW+ G    G+LG E   +  TP  ++ L    V+ +
Sbjct: 159 LEDVIKVAAGSRHSLALKKDG-TVWAWGYNYYGQLGDESNIRRNTPVQVKGLTG--VKDI 215

Query: 431 CAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
            AG  FSVAL  DG V+ WG   +      + I+ + P+   G+S+  I  +S GD HVL
Sbjct: 216 DAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSN--ITQISAGDEHVL 273

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           AL +   V+ WG+   GQ G    ++ +  P K+    +  V+ + AG++ S A
Sbjct: 274 ALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTE--VKSVKAGTMVSAA 325



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 149/322 (46%), Gaps = 27/322 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
           V+ WG N + Q+ DE   + + P      + ++ I+AG F +  L   G +  +G   KG
Sbjct: 181 VWAWGYNYYGQLGDESNIRRNTPVQVKGLTGVKDIDAGDFFSVALRDDGTVWGWGYNYKG 240

Query: 247 WLGLANTTIQPLPKRVPLEAAIVS-LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
            +G        +   VPL+   VS ++     + HVL +  +  V+ WG G+ G+LG+G 
Sbjct: 241 QIGCG----TGINSNVPLQTVGVSNITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGT 296

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-- 363
             S  R    +       V  V AG   SAA+ EDG L+ WG+  +G +G+    SR+  
Sbjct: 297 AASFLRIPEKLSSF--TEVKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGN----SRNIN 350

Query: 364 -TPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
            +P    ++S + AV   +     L  DG TVW+ G    G LG         P V+   
Sbjct: 351 SSPVQRKDISGIKAVELNQYCAAALKNDG-TVWTWGKNINGILGLGTALDSQIPSVVSGT 409

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT-PVLVTGLSSHQIVDV 477
               V  +  G +    +  DG ++ WG      L + ++ + T PV + G+S+  I  +
Sbjct: 410 GDVEV--ISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGISN--ISKI 465

Query: 478 SIGDSHVLALSQYNEVYAWGSN 499
           S G  HVLA+ +   ++AWG+N
Sbjct: 466 SCGGKHVLAIDENKTLWAWGNN 487



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 24/275 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKC-SRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG--KG 246
           ++ WG N + Q++D+V     S      +P  ++  +  +      + T  L+VY   + 
Sbjct: 481 LWAWGNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRT--LVVYEDEEV 538

Query: 247 WLGLANTTIQP------LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
           W+  A  T+        LP ++     +  +SV K    H+L +  +G VYS G    G+
Sbjct: 539 WIYAAKNTVAGDEQSVYLPYKIEGLEGVTDVSVGK---NHILALKDDGYVYSAGNSYWGQ 595

Query: 301 LGHG-----NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           LG G     N+ S+        GL    +  V+AG  HS A+  DG ++TWG    G L 
Sbjct: 596 LGDGSQTHHNSYSETFNLTKAKGL--TNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELA 653

Query: 356 HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
           HG+      P     L ++ A+S G ++ L L +DG TVW+ G    G+LG+  T K   
Sbjct: 654 HGNDTFSLEPMQAEGLENICAISAGNNYNLALKEDG-TVWAWGDNTYGQLGNGSTYKTNV 712

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           P  ++ L    + K+ AG   S A+T DG V+ WG
Sbjct: 713 PVQVDGLE--NIVKIIAGRDSSFAITKDGDVWAWG 745



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 18/269 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E H + +  +G V++WG   +G+LG G     +R PK I G    + V +V+AG  HS
Sbjct: 116 CGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGL---EDVIKVAAGSRHS 172

Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
            A+ +DG ++ WG   +G+LG      R+TP  V  L+ V  +  G+  ++ L  DG TV
Sbjct: 173 LALKKDGTVWAWGYNYYGQLGDESNIRRNTPVQVKGLTGVKDIDAGDFFSVALRDDG-TV 231

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
           W  G    G++G         P  ++ +    + ++ AG    +AL  D  V+ WG G +
Sbjct: 232 WGWGYNYKGQIGCGTGINSNVP--LQTVGVSNITQISAGDEHVLALDKDKNVWGWGAGDK 289

Query: 455 -----SSSISF-HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
                 ++ SF   P  ++  +  ++  V  G     A+ +   ++ WG NT G  G   
Sbjct: 290 GQLGNGTAASFLRIPEKLSSFT--EVKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSR 347

Query: 509 --FSNPVDQPSKVVGLEDVCVRQICAGSL 535
              S+PV Q   + G++ V + Q CA +L
Sbjct: 348 NINSSPV-QRKDISGIKAVELNQYCAAAL 375



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 169/368 (45%), Gaps = 32/368 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSR-PRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWL 248
           V+ WG     Q+ +       R P   S  + ++ ++AG   +  +   G L ++G    
Sbjct: 281 VWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVKSVKAGTMVSAAIKEDGTLWIWGDNTY 340

Query: 249 GLANTT--IQPLPKRVPLEAAIVSLSVSK-CSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G+   +  I   P +    + I ++ +++ C+ A    + ++G V++WG   +G LG G 
Sbjct: 341 GIMGNSRNINSSPVQRKDISGIKAVELNQYCAAA----LKNDGTVWTWGKNINGILGLGT 396

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            L  + P ++ G      V  +S G +H A +  DG L+TWG   +G+LG+G++     P
Sbjct: 397 ALDSQIPSVVSGT---GDVEVISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITEP 453

Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG-------NLGKLGHEDTGKVTTPKV 418
             +  +S++  +SCG  H L + ++  T+W+ G+        ++G      +     P  
Sbjct: 454 VTINGISNISKISCGGKHVLAIDEN-KTLWAWGNNDYLQLIDDVGLSAESGSNDYCIPFA 512

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--LRSSSISFHTPVLVTGLSSHQIVD 476
           +++ +   V+ + A  + ++ +  D  V+ +     +     S + P  + GL    + D
Sbjct: 513 VKSEKD--VKDIVAAFNRTLVVYEDEEVWIYAAKNTVAGDEQSVYLPYKIEGLEG--VTD 568

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQD-----NFSNPVDQPSKVVGLEDVCVRQIC 531
           VS+G +H+LAL     VY+ G++  GQ G       N  +     +K  GL ++    + 
Sbjct: 569 VSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHHNSYSETFNLTKAKGLTNIVA--VA 626

Query: 532 AGSLFSIA 539
           AGS  S+A
Sbjct: 627 AGSEHSVA 634



 Score = 89.7 bits (221), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 9/188 (4%)

Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAG 330
           ++V+  SE H + + ++G V++WG  + G+L HGN      P +   GL  + +  +SAG
Sbjct: 623 VAVAAGSE-HSVALKNDGTVWTWGSNQFGELAHGNDTFSLEP-MQAEGL--ENICAISAG 678

Query: 331 HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
           ++++ A+ EDG ++ WG+  +G+LG+G     + P  V  L ++  +  G   +  +++D
Sbjct: 679 NNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPVQVDGLENIVKIIAGRDSSFAITKD 738

Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G  VW+ G  N G+LG   T    TP  I+A +    + + +G  F++ L  DG V   G
Sbjct: 739 GD-VWAWGKNNCGQLGDGTTQNRLTPVKIDAFKG--CKSIVSGMDFTMVLMNDGTVI--G 793

Query: 451 LGLRSSSI 458
           +G   S +
Sbjct: 794 VGSNVSGV 801



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 23/228 (10%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP-------TLVTELSDVGA 376
           VT VS G +H  A+ +DG +Y+ G    G+LG G  ++ H         T    L+++ A
Sbjct: 566 VTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGS-QTHHNSYSETFNLTKAKGLTNIVA 624

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
           V+ G  H++ L  DG TVW+ GS   G+L H +      P   E L    +  + AG ++
Sbjct: 625 VAAGSEHSVALKNDG-TVWTWGSNQFGELAHGNDTFSLEPMQAEGLE--NICAISAGNNY 681

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           ++AL  DG V+ WG      LG   S+   + PV V GL    IV +  G     A+++ 
Sbjct: 682 NLALKEDGTVWAWGDNTYGQLG-NGSTYKTNVPVQVDGL--ENIVKIIAGRDSSFAITKD 738

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            +V+AWG N  GQ G     N +  P K+   +  C + I +G  F++
Sbjct: 739 GDVWAWGKNNCGQLGDGTTQNRL-TPVKIDAFKG-C-KSIVSGMDFTM 783



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 164/372 (44%), Gaps = 36/372 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
           V+TWG N++  +          P + S   ++  I  G+    ++ S G L  +G    G
Sbjct: 381 VWTWGKNINGILGLGTALDSQIPSVVSGTGDVEVISCGKTHMAIIKSDGTLWTWGYNIYG 440

Query: 250 -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
            L N  +  + + V +   I ++S   C   HVL +     +++WG  ++ +L     LS
Sbjct: 441 QLGNGNVDYITEPVTING-ISNISKISCGGKHVLAIDENKTLWAWGNNDYLQLIDDVGLS 499

Query: 309 QRRPK----LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
                    +       K V  + A  + +  V ED  ++ +   +      GD +S + 
Sbjct: 500 AESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAKN---TVAGDEQSVYL 556

Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG---------HEDTGKVTT 415
           P  +  L  V  VS G++H L L  DG+ V+S G+   G+LG         + +T  +T 
Sbjct: 557 PYKIEGLEGVTDVSVGKNHILALKDDGY-VYSAGNSYWGQLGDGSQTHHNSYSETFNLTK 615

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
            K +       +  V AG+  SVAL  DG V+ WG      L   + + S   P+   GL
Sbjct: 616 AKGLT-----NIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSLE-PMQAEGL 669

Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
               I  +S G+++ LAL +   V+AWG NT GQ G  + +   + P +V GLE++   +
Sbjct: 670 --ENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGS-TYKTNVPVQVDGLENIV--K 724

Query: 530 ICAGSLFSIAYT 541
           I AG   S A T
Sbjct: 725 IIAGRDSSFAIT 736



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 10/184 (5%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSK 275
           +NI  + AG   +  L + G +  +G    G L   N T    P +      I ++S   
Sbjct: 620 TNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGNDTFSLEPMQAEGLENICAIS--- 676

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
               + L +  +G V++WG   +G+LG+G+T     P + + GL  + + ++ AG   S 
Sbjct: 677 AGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVP-VQVDGL--ENIVKIIAGRDSSF 733

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           A+T+DG ++ WG+ + G+LG G  ++R TP  +       ++  G   T+VL  DG TV 
Sbjct: 734 AITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKIDAFKGCKSIVSGMDFTMVLMNDG-TVI 792

Query: 396 SMGS 399
            +GS
Sbjct: 793 GVGS 796


>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
          Length = 1011

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 13/234 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
            L +T  G +YSWG+  +GKLG  +      P  IM  L  K++TQ++ G  HS A+ E 
Sbjct: 233 ALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIME-LKNKQITQIACGKDHSLALDEI 291

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD---VGAVSCGESHTLVLSQDGHTVWSM 397
           G +Y WG G  GRLG         PT+V    D   V  ++CG+ H++ + QDG  V+S 
Sbjct: 292 GCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGR-VFSW 350

Query: 398 GSGNLGKLGHED-TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL--- 453
           G    GKLG+ +  G  +TP+ +E++     ++V  G   S+ LT  G V+ +G      
Sbjct: 351 GQAGFGKLGYSNPMGFQSTPRRVESIPA--CKQVSCGNWHSLTLTNGGDVYAFGSNREGR 408

Query: 454 --RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
             R  +     P  V   ++ +I  +  G +    L+  N +Y WG+N  GQ G
Sbjct: 409 CGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLG 462



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 121/228 (53%), Gaps = 15/228 (6%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGE 381
           V+ V  G + +  +T+ G++Y+WG   +G+LG         P+ + EL +  +  ++CG+
Sbjct: 223 VSNVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGK 282

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL-RKFRVRKVCAGTSFSVAL 440
            H+L L + G  V++ G+G  G+LG   T  V+ P ++     + +V  +  G   S+A+
Sbjct: 283 DHSLALDEIG-CVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAV 341

Query: 441 TWDGLVFWWG------LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
             DG VF WG      LG  S+ + F  TP  V  + + +   VS G+ H L L+   +V
Sbjct: 342 CQDGRVFSWGQAGFGKLGY-SNPMGFQSTPRRVESIPACK--QVSCGNWHSLTLTNGGDV 398

Query: 494 YAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           YA+GSN  G+CG++  +     P++V+   ++ +++I AG  F+   T
Sbjct: 399 YAFGSNREGRCGRE-LTTVESPPNRVIFDANIKIKKIGAGLNFNAVLT 445



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 152/389 (39%), Gaps = 38/389 (9%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR--LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           +Y+WG   + ++    +  C  P   ++     I  I  G+  +  LD  G +  +G G 
Sbjct: 242 IYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLALDEIGCVYAWGNGA 301

Query: 248 ---LGLANTTIQPLPKRV---PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              LGL  T +  LP  V   P +  +V ++   C + H + V  +G V+SWG    GKL
Sbjct: 302 GGRLGLNKTDVVSLPTMVAHFPDQVKVVGIA---CGQDHSMAVCQDGRVFSWGQAGFGKL 358

Query: 302 GHGNTLS-QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
           G+ N +  Q  P+ +      K   QVS G+ HS  +T  G +Y +G    GR G     
Sbjct: 359 GYSNPMGFQSTPRRVESIPACK---QVSCGNWHSLTLTNGGDVYAFGSNREGRCGRELTT 415

Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
               P  V   ++  +  +  G +   VL+   + +++ G+ + G+L     G +   K 
Sbjct: 416 VESPPNRVIFDANIKIKKIGAGLNFNAVLTT-SNMIYTWGNNDKGQL-----GVLIETKS 469

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVS 478
                           S   A   D   +               P LV  L  + I ++ 
Sbjct: 470 NSTNNSRNNNNNNNYISVYAATLNDTYTY--------------VPQLVKTLLPYPINNIE 515

Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
           +G  HV+ L+   EV  +GSN M Q G            KV       V +I AG+  S+
Sbjct: 516 VGYEHVVVLTDAGEVITFGSNQMDQLGHGELLRDAGTFRKVEIQNKSTVFKIAAGNYASL 575

Query: 539 AYTVPPSNSALSSAFTPLCVDVRPHTFTL 567
             ++   +S   S    L  D R +   L
Sbjct: 576 V-SLSSGHSIFGSEMAQLLKDERYYDLCL 603


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 26/352 (7%)

Query: 219 SNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCS 277
            N+R +  G   T  +   G +   G   LG L +   +  P++V    A + ++VS C 
Sbjct: 34  KNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKPEQVGALDAQIIVAVS-CG 92

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           EAH L +  +G+V+SWG   +G++G        R    +  L   ++ QV+ GH HS A+
Sbjct: 93  EAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLAL 152

Query: 338 TEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV 394
           ++D  +++WG+  +G+LG G ++K    P  +  LS +    ++ G  H+  L+  G  +
Sbjct: 153 SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISG-AI 211

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           +  G    G+LG  D      P ++++LR  ++  +C G   + ALT +G VF +G G  
Sbjct: 212 FGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGY 271

Query: 453 --LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCGQD- 507
             L  +S +    P  V  L    +  ++ G  H LA       +Y++G    GQ G   
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 508 --NFSNPVDQPSKVVGLED-----------VCVRQICAGSLFSIAYTVPPSN 546
             N  +P       +  ED            C+++I +G   S A+ +   N
Sbjct: 332 TINRKSPFTVKGNWLTYEDYVRHLPEANGCYCLKRIYSGGDQSFAHYITIQN 383



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 119/265 (44%), Gaps = 26/265 (9%)

Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  RR    +     K V  V  G  H+  V +DG +YT G
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFIN----KNVRDVGCGSRHTVFVLDDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
             D G+LGH   KSR  P  V  L    + AVSCGE+HTL L+  G  V+S G    G++
Sbjct: 60  CNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQ-VFSWGHAVYGQI 116

Query: 406 GHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
           G     + +  P+ I++L   ++ +V  G   S+AL+ D  +F WG      LGL     
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ--P 516
               P  +  LS      ++ G  H  AL+    ++ WG N  GQ G    ++  D+  P
Sbjct: 177 KECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG---LTDETDRNVP 233

Query: 517 SKVVGLEDVCVRQICAGSLFSIAYT 541
           + +  L    +  IC G   + A T
Sbjct: 234 ALLKSLRSQKIIHICCGEDHTAALT 258



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 9/242 (3%)

Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V++WG  ++ QI L         PR ++SL    I  +  G   +  L     +  +G
Sbjct: 103 GQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL     +    R     + +  +       H   +T  G ++ WG  + G+L
Sbjct: 163 QNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G  +   +  P L +  L  +++  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLTDETDRNVPAL-LKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HTL        ++S G G  G+LG   T    +P  +
Sbjct: 282 EVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTV 341

Query: 420 EA 421
           + 
Sbjct: 342 KG 343


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
           R +S+     I  I  G + +  L   G L  +G+   G LG+          ++    A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLA 189

Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
            + L+     EAH + ++  G +YSWG  E G+LG  +T S+  P LI   L  ++V  +
Sbjct: 190 GIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLI-EALDNQKVEFL 248

Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
           + G SH+A +T+DGLL+T+G G HG+LGH   ++   P LV EL+   V  ++CG  HTL
Sbjct: 249 ACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTL 308

Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
               D   V+S GSG  G+LG+  T     P
Sbjct: 309 AYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 107/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G          I+  L G  +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPL 193

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG+ + G+LG    +S+ +P+L+  L +  V  ++CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           HT +L+QDG  +++ G+G  G+LGH  T     P ++  L   RV ++  G   ++A   
Sbjct: 254 HTALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVS 312

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 116/217 (53%), Gaps = 11/217 (5%)

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--G 375
           L  K++ Q++ G  HS A+++ G L+ WG+  HG+LG G    S   P +V  L+ +   
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLA 194

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
            +S GE+H++ LS  G+ ++S G    G+LG + T    +P +IEAL   +V  +  G S
Sbjct: 195 QISAGEAHSMALSMSGN-IYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGS 253

Query: 436 FSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQ 489
            +  LT DGL+F +G G       +S+ +   P LV  L+ +++  ++ G  H LA +S 
Sbjct: 254 HTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSD 313

Query: 490 YNEVYAWGSNTMGQCGQDNFSNP-VDQPSKVVGLEDV 525
             +V+++GS   GQ G     +  +  P KV   ED+
Sbjct: 314 LGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDL 350



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 24/198 (12%)

Query: 184 SVAHSK---VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTF 232
           S+A SK   ++ WG NLH Q+     G   +    + P  + H        I AG+  + 
Sbjct: 150 SLALSKGGELFAWGQNLHGQL-----GVGRKFPSTTAPQIVEHLAGIPLAQISAGEAHSM 204

Query: 233 LLDSTGGLLVYGK---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEG 288
            L  +G +  +GK   G LGL +T  +  P  +  L+   V      C  +H   +T +G
Sbjct: 205 ALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLA--CGGSHTALLTQDG 262

Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWG 347
            ++++G G+HG+LGH +T ++ RP L+   L G RVTQ++ G  H+ A   D G ++++G
Sbjct: 263 LLFTFGAGKHGQLGHNSTQNELRPCLV-AELAGNRVTQIACGRWHTLAYVSDLGKVFSFG 321

Query: 348 EGDHGRLGHGDLKSRHTP 365
            G  G+LG+G  + +  P
Sbjct: 322 SGKEGQLGNGGTRDQLIP 339



 Score = 61.6 bits (148), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 20/168 (11%)

Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
           + ++  G  H L+LS DG            K    D   +   +    L++ ++ ++  G
Sbjct: 99  IHSMDLGADHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146

Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
              S+AL+  G +F WG      LG+     S   P +V  L+   +  +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAHSMAL 206

Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           S    +Y+WG N  GQ G D+ +   D PS +  L++  V  + C GS
Sbjct: 207 SMSGNIYSWGKNEFGQLGLDH-TESKDSPSLIEALDNQKVEFLACGGS 253



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 6/130 (4%)

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSH 472
           + TPK I+  +  ++  +  G    + L+ DG  F         + S       + L   
Sbjct: 85  LRTPKCIKLGKNMKIHSMDLGADHMLILSSDGKPF------EYDNYSMKHLRFESILQEK 138

Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
           +I+ ++ GD H LALS+  E++AWG N  GQ G          P  V  L  + + QI A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISA 198

Query: 533 GSLFSIAYTV 542
           G   S+A ++
Sbjct: 199 GEAHSMALSM 208


>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 864

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 161/340 (47%), Gaps = 36/340 (10%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK- 245
             V  WG N   Q+ D      + P  +  LPS I+ I AG   +  + + G +  +G  
Sbjct: 82  GAVLAWGQNNSGQLGDGSTQNRTLPVNVLGLPS-IKAISAGGSYSLAVGADGKVWAWGAN 140

Query: 246 -------GWLG-------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVY 291
                  G+LG        A+  + P+   +P  AA VS  ++     H L +  +G+++
Sbjct: 141 NSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAAVSGGLN-----HSLALAKDGKLW 195

Query: 292 SWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           +WG   +G+LG G T ++  P  +   + G  +  ++AG  HS A+  DG ++ WG  + 
Sbjct: 196 AWGANTYGQLGDGTTANRLAPVSVN--IPGGAIA-IAAGWYHSLAIARDGRVWAWGRNNS 252

Query: 352 GRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           G++G+G   ++ TP +V       AV+ G SH+LV+  +G TVWS G+ N G+LG     
Sbjct: 253 GQVGNGGTANQLTPVVVAFPGSAIAVAGGGSHSLVVLSNG-TVWSWGANNAGQLGDGSNA 311

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLV 466
              +P  +  +      KV AG  FS+A+T DG V+ WG   R      S  +   PV +
Sbjct: 312 TRVSPIQVPGIGV--ATKVAAGGYFSLAITSDG-VWSWGQNTRGQLGNGSLANSSVPVFI 368

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           T  S    + +S G  H L L     ++AWG N  GQ G 
Sbjct: 369 TATS--NALALSGGYHHSLILRPGCPIWAWGFNAYGQLGD 406



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 36/317 (11%)

Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLS 272
           SL +  + + AG + + LL STG +L +G+   G LG  +T  + LP  V    +I ++S
Sbjct: 60  SLSNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPVNVLGLPSIKAIS 119

Query: 273 VSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK------------LIMGGLY 320
                 ++ L V ++G+V++WG    G+LG G   + +               +I GG  
Sbjct: 120 AGG---SYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGG-- 174

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG 380
                 VS G +HS A+ +DG L+ WG   +G+LG G   +R  P  V       A++ G
Sbjct: 175 ---AAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIPGGAIAIAAG 231

Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             H+L +++DG  VW+ G  N G++G+  T    TP V+ A     +  V  G S S+ +
Sbjct: 232 WYHSLAIARDGR-VWAWGRNNSGQVGNGGTANQLTPVVV-AFPGSAI-AVAGGGSHSLVV 288

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LG  S++    +P+ V G+       V+ G    LA++  + V+
Sbjct: 289 LSNGTVWSWGANNAGQLGDGSNATRV-SPIQVPGIG--VATKVAAGGYFSLAITS-DGVW 344

Query: 495 AWGSNTMGQCGQDNFSN 511
           +WG NT GQ G  + +N
Sbjct: 345 SWGQNTRGQLGNGSLAN 361



 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 32/280 (11%)

Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
           H L + S G V +WG    G+LG G+T ++  P  ++ GL    +  +SAG S+S AV  
Sbjct: 74  HSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPVNVL-GL--PSIKAISAGGSYSLAVGA 130

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRH----------TPTLVTELSDVGAVSCGESHTLVLSQ 389
           DG ++ WG  + G+LG G L +            TP  +       AVS G +H+L L++
Sbjct: 131 DGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAAVSGGLNHSLALAK 190

Query: 390 DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           DG  +W+ G+   G+LG   T     P  +          + AG   S+A+  DG V+ W
Sbjct: 191 DGK-LWAWGANTYGQLGDGTTANRLAPVSVNI--PGGAIAIAAGWYHSLAIARDGRVWAW 247

Query: 450 GLGLRSSSISFH--------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           G   R++S            TPV+V    S   + V+ G SH L +     V++WG+N  
Sbjct: 248 G---RNNSGQVGNGGTANQLTPVVVAFPGS--AIAVAGGGSHSLVVLSNGTVWSWGANNA 302

Query: 502 GQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           GQ G  + +  V  P +V G+      ++ AG  FS+A T
Sbjct: 303 GQLGDGSNATRV-SPIQVPGIG--VATKVAAGGYFSLAIT 339



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 60/231 (25%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
            K++ WG N + Q+ D        P   ++P     I AG + +  +   G +  +G+  
Sbjct: 192 GKLWAWGANTYGQLGDGTTANRLAPVSVNIPGGAIAIAAGWYHSLAIARDGRVWAWGRNN 251

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
            G +G   T  Q  P  V    + ++++      +H L V S G V+SWG    G+LG G
Sbjct: 252 SGQVGNGGTANQLTPVVVAFPGSAIAVAGGG---SHSLVVLSNGTVWSWGANNAGQLGDG 308

Query: 305 NTLSQRRPKLIMG-GLYGKRVTQVSAGHSHSAAVTEDGL--------------------- 342
           +  ++  P  + G G+     T+V+AG   S A+T DG+                     
Sbjct: 309 SNATRVSPIQVPGIGV----ATKVAAGGYFSLAITSDGVWSWGQNTRGQLGNGSLANSSV 364

Query: 343 ----------------------------LYTWGEGDHGRLGHGDLKSRHTP 365
                                       ++ WG   +G+LG G L  R  P
Sbjct: 365 PVFITATSNALALSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTLVDRLAP 415


>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
           domestica]
          Length = 531

 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    + VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TP  V  L S  ++ +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N SN +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 14/261 (5%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG +Y WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V +++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVSIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPCRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V ++  G + ++ALT +GL++ WG      LG  + S +  +P  +  +   ++V+++
Sbjct: 233 VCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKS-NLLSPAQIM-VEKERVVEIA 290

Query: 479 IGDS-HV-LALSQYNEVYAWG 497
              S H   A +Q   VY WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (252), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEVY+WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L  V    + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPCRVAALHSVCVLQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKSNLLSPAQI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 11/172 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +VY WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G    G G LGL N   Q  P RV    ++  L +  C  AH L +T EG +Y+WG   +
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIV-CGYAHTLALTDEGLLYAWGANTY 262

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 263 GQLGTGNKSNLLSPAQIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  114 bits (286), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 154/327 (47%), Gaps = 37/327 (11%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLG 249
            +Y WG N   QI D       +P    +  ++  +  G + +  +   G L ++G    G
Sbjct: 760  LYMWGVNDFGQIGDGTTKNRYKPT--KILDHVVSVSLGDYYSGAITQDGSLYMWGSNVYG 817

Query: 250  -LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
             + + T +   K   +   ++++S+  C   H   +T +G +Y WG  + G++G G T  
Sbjct: 818  QIGDGTTEDRYKPTKILDHVIAVSLGYC---HSGAITQDGSLYMWGSNDSGQIGDGTTED 874

Query: 309  QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
            + +P  I+       V  VS G SHS A+T+DG LY WG    G +G G  + R+ PT +
Sbjct: 875  RYKPTKIL-----DHVIAVSLGVSHSGAITQDGSLYMWGSNSRGGIGDGTTEVRYKPTKI 929

Query: 369  TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG---HEDTGKVTTPKVIEALRKF 425
              L  V AVS    ++  ++QDG +++  GS   G++G    ED  K T  K+++     
Sbjct: 930  --LDHVIAVSLQTGNSGAITQDG-SLYMWGSNVYGEIGDGTEEDRYKPT--KILD----- 979

Query: 426  RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH-TPVLVTGLSSHQIVDVS 478
             V  V  G   S A+T DG ++ WG      +G  +    +  T +L        ++ VS
Sbjct: 980  HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKIL------DHVIAVS 1033

Query: 479  IGDSHVLALSQYNEVYAWGSNTMGQCG 505
            +G  H  A++Q   +Y WG N+ GQ G
Sbjct: 1034 LGVGHSGAITQDGSLYMWGWNSDGQIG 1060



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 148/305 (48%), Gaps = 36/305 (11%)

Query: 227  GQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT 283
            G + + ++   G L ++G    G +G   T  +  P ++      VSL      + +   
Sbjct: 747  GDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKILDHVVSVSLG-----DYYSGA 801

Query: 284  VTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLL 343
            +T +G +Y WG   +G++G G T  + +P  I+       V  VS G+ HS A+T+DG L
Sbjct: 802  ITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKIL-----DHVIAVSLGYCHSGAITQDGSL 856

Query: 344  YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLG 403
            Y WG  D G++G G  + R+ PT +  L  V AVS G SH+  ++QDG +++  GS + G
Sbjct: 857  YMWGSNDSGQIGDGTTEDRYKPTKI--LDHVIAVSLGVSHSGAITQDG-SLYMWGSNSRG 913

Query: 404  KLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
             +G   T     P K+++      V  V   T  S A+T DG ++ WG      +G  + 
Sbjct: 914  GIGDGTTEVRYKPTKILD-----HVIAVSLQTGNSGAITQDGSLYMWGSNVYGEIGDGTE 968

Query: 457  SISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
               +  T +L        ++ VS+GD H  A++Q   +Y WG N  G+ G D       +
Sbjct: 969  EDRYKPTKIL------DHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIG-DGTEEDRYK 1021

Query: 516  PSKVV 520
            P+K++
Sbjct: 1022 PTKIL 1026



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 18/233 (7%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
            +Y WG N   QI D       +P    +  ++  +  G   +  +   G L ++G   +G
Sbjct: 856  LYMWGSNDSGQIGDGTTEDRYKPT--KILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRG 913

Query: 247  WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
             +G   T ++  P ++      VSL            +T +G +Y WG   +G++G G  
Sbjct: 914  GIGDGTTEVRYKPTKILDHVIAVSLQTGNSG-----AITQDGSLYMWGSNVYGEIGDGTE 968

Query: 307  LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT 366
              + +P  I+       V  VS G  HS A+T+DG LY WG   +G +G G  + R+ PT
Sbjct: 969  EDRYKPTKIL-----DHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPT 1023

Query: 367  LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
             +  L  V AVS G  H+  ++QDG +++  G  + G++G   T    TP  I
Sbjct: 1024 KI--LDHVIAVSLGVGHSGAITQDG-SLYMWGWNSDGQIGDGTTKARYTPTQI 1073



 Score = 75.1 bits (183), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 17/184 (9%)

Query: 190  VYTWGCNLHHQILD---EVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
            +Y WG N    I D   EVR K ++     +  +++   +G      +   G L ++G  
Sbjct: 904  LYMWGSNSRGGIGDGTTEVRYKPTKILDHVIAVSLQTGNSG-----AITQDGSLYMWGSN 958

Query: 247  WLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
              G + + T +   K   +   ++++S+    + H   +T +G +Y WG   +G++G G 
Sbjct: 959  VYGEIGDGTEEDRYKPTKILDHVIAVSLG---DDHSGAITQDGSLYMWGRNYYGEIGDGT 1015

Query: 306  TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
               + +P  I+       V  VS G  HS A+T+DG LY WG    G++G G  K+R+TP
Sbjct: 1016 EEDRYKPTKIL-----DHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTP 1070

Query: 366  TLVT 369
            T +T
Sbjct: 1071 TQIT 1074


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  114 bits (286), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 18/257 (7%)

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR-HTPTLVTELSDVG--AVSC 379
           RV  VS G  HS AV   G ++ WG G  G+LG G+ K R  TP  +  L+ +    VSC
Sbjct: 98  RVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSC 157

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV 438
           G  H+L LS+DG  V+S G  + G+LG  ++    T+P+ + +L    + +V AG + S 
Sbjct: 158 GYYHSLALSEDGQ-VFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSF 216

Query: 439 ALTWDGLVFWWG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           AL+  G  F WG        L    + +  + P+ V  L +  +V +S G  H   L+Q 
Sbjct: 217 ALSLSGTSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQN 276

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
             VY +G+N+ GQ G            ++ GL    V QI  GS  ++AY V  +   +S
Sbjct: 277 GAVYTFGANSSGQLGHSAEQRGPQCVERIDGL----VSQIDCGSYHTLAY-VYTTGQVVS 331

Query: 551 SAFTPLCVDVRPHTFTL 567
               P C     H+ T+
Sbjct: 332 FGHGPSCTSNSTHSETV 348



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 4/168 (2%)

Query: 288  GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
            GE+++WG   HG+LG G          I+  L G  + Q+SAG +HS A++  G +Y+WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 348  EGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
            + D G+LG G  +S+ +P+L+  L    V  ++CG SHT +L+QDG  V++ G+G  G+L
Sbjct: 973  KNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDG-LVFTFGAGKYGQL 1031

Query: 406  GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD-GLVFWWGLG 452
            GH  T     P ++  L   RV ++  G   ++A   + G VF +G G
Sbjct: 1032 GHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSG 1079



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 10/193 (5%)

Query: 238  GGLLVYGK---GWLGLANT-TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            G L  +G+   G LGL       P P+ V   A +  + +S   EAH + ++  G VYSW
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQIS-AGEAHSMALSMTGNVYSW 971

Query: 294  GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
            G  + G+LG G+T S+  P L+   L  ++V  ++ G SH+A +T+DGL++T+G G +G+
Sbjct: 972  GKNDFGQLGLGHTESKDSPSLLR-ALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 354  LGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
            LGH   +    P LVTEL  + V  ++CG  HTL    +   V++ GSG  G+LG  + G
Sbjct: 1031 LGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG--NCG 1088

Query: 412  KVTTPKVIEALRK 424
                P     LR+
Sbjct: 1089 THNQPNSYVNLRR 1101



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 7/181 (3%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C + H L V  +G V++WG G  G+LG G    +      +  L G ++ QVS G+ HS 
Sbjct: 104 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSL 163

Query: 336 AVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDGH 392
           A++EDG +++WG+  HG+LG G ++ S+ +P  V  L  +    V+ G +H+  LS  G 
Sbjct: 164 ALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSG- 222

Query: 393 TVWSMGSGNLGKL---GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
           T +  GS + G+L   G +   +   P  + AL+   V  +  G+  +  LT +G V+ +
Sbjct: 223 TSFGWGSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTF 282

Query: 450 G 450
           G
Sbjct: 283 G 283



 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 13/191 (6%)

Query: 341  GLLYTWGEGDHGRLGHGDL-KSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSM 397
            G L+ WG+  HG+LG G +  S  TP +V  L+ V  V  S GE+H++ LS  G+ V+S 
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGN-VYSW 971

Query: 398  GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---- 453
            G  + G+LG   T    +P ++ AL   +V  +  G S +  LT DGLVF +G G     
Sbjct: 972  GKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQL 1031

Query: 454  -RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQCGQDNFSN 511
              SS+     P LVT L  +++  ++ G  H LA +S+  +V+A+GS   GQ G     N
Sbjct: 1032 GHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHN 1091

Query: 512  PVDQPSKVVGL 522
               QP+  V L
Sbjct: 1092 ---QPNSYVNL 1099



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 119/280 (42%), Gaps = 22/280 (7%)

Query: 183 ISVAH-SKVYTWGCNLHHQI-LDEVRGKCSRP-RLQSLPS-NIRHIEAGQFCTFLLDSTG 238
           ++V H  +V+ WG     Q+ + E + +   P ++++L    I  +  G + +  L   G
Sbjct: 110 LAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSLALSEDG 169

Query: 239 GLLVYGK---GWLGLANTT-IQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            +  +GK   G LGL      Q  P+RV  LE   + L+      AH   ++  G  + W
Sbjct: 170 QVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEG--IPLAQVAAGGAHSFALSLSGTSFGW 227

Query: 294 GVGEHGKLGHGNTLS--QRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDH 351
           G    G+L    T +  QR   L +G L    V  +S G  H+A +T++G +YT+G    
Sbjct: 228 GSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSS 287

Query: 352 GRLGHGDLKSRHTPTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT 410
           G+LGH     +  P  V  +   V  + CG  HTL        V S G G         +
Sbjct: 288 GQLGHS--AEQRGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFGHGPSCTSNSTHS 345

Query: 411 GKVTTPKVI------EALRKFRVRKVCAGTSFSVALTWDG 444
             VT    I      + L   +V+ + AGT  +   T+ G
Sbjct: 346 ETVTDNADISCLISADDLVDIQVKHIFAGTHANFVTTYQG 385



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)

Query: 402 LGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRS 455
           L  L  E++   + P+ I+A    RV  V  G   S+A+   G VF WG      LG+  
Sbjct: 74  LPALLREESAPSSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE 133

Query: 456 SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQ 515
                 TP  +  L+  +I+ VS G  H LALS+  +V++WG N+ GQ G          
Sbjct: 134 FKERSFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS 193

Query: 516 PSKVVGLEDVCVRQICAGSLFSIAYTV 542
           P +V  LE + + Q+ AG   S A ++
Sbjct: 194 PQRVRSLEGIPLAQVAAGGAHSFALSL 220



 Score = 48.9 bits (115), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 444  GLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
            G +F WG      LGL     S  TP +V  L+   +V +S G++H +ALS    VY+WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 498  SNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
             N  GQ G  + +   D PS +  L+   V  + C GS
Sbjct: 973  KNDFGQLGLGH-TESKDSPSLLRALDSQKVDFLACGGS 1009


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 103/217 (47%), Gaps = 11/217 (5%)

Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G GE G+LG GN      PK I      K+V  VS G  HSA  TE   + TWG G  GR
Sbjct: 41  GNGESGRLGLGNENCCNIPKRIN---IKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGR 97

Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           LG GD  SR  P L      V  +SCG   T VL+  G  V++ G G+ GKLGH +    
Sbjct: 98  LGTGDEISRTQPVLPEH--KVAQISCGSDWTAVLTLAG-KVFTFGVGSYGKLGHGNDSNQ 154

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTG 468
             PK++E L   RV  +  G     AL  +G VF WG G        S      PVLV G
Sbjct: 155 LVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKG 214

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
           ++    + V  G  H+   +   E+Y WG N  GQCG
Sbjct: 215 MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCG 251



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 39/315 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPR----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           V++WG     Q+        S PR    L+  PS I  +  G+                 
Sbjct: 2   VFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGE----------------S 45

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LGL N     +PKR+ ++  +V +S   C + H    T    V +WG G  G+LG G+
Sbjct: 46  GRLGLGNENCCNIPKRINIKKKVVGVS---CGDEHSAVFTEANTVLTWGNGTGGRLGTGD 102

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
            +S+ +P L        +V Q+S G   +A +T  G ++T+G G +G+LGHG+  ++  P
Sbjct: 103 EISRTQPVLPE-----HKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVP 157

Query: 366 TLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR 423
            LV EL    V ++SCG  H   L+ +G  V++ G G  G+LGH        P +++ + 
Sbjct: 158 KLVEELDTERVVSLSCGADHMAALNIEG-DVFTWGCGGNGRLGHGSERDSKKPVLVKGMN 216

Query: 424 KFRVRKV-CAGTSFSVALTWDGLVFWWGLGLRSS-SISFH-----TPVLVTGLSSHQIVD 476
                 V C G    V  T DG ++ WG  +     +  H     TPVLV  L   +++ 
Sbjct: 217 GLVALTVECGGYHMGVT-TLDGELYMWGWNVYGQCGLGLHVENQLTPVLVEQLRGKRVLM 275

Query: 477 VSIGDSHVLALSQYN 491
           V+ G+SH +AL   N
Sbjct: 276 VACGESHTMALVSNN 290



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 28/222 (12%)

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
           V+SWG+G  G+LGH +  +   P+ +                  SA   +  ++   G G
Sbjct: 2   VFSWGLGNGGQLGHHDEENGSFPREV------------------SALRKKPSVIIAVGNG 43

Query: 350 DHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED 409
           + GRLG G+    + P  +     V  VSCG+ H+ V ++  +TV + G+G  G+LG  D
Sbjct: 44  ESGRLGLGNENCCNIPKRINIKKKVVGVSCGDEHSAVFTEA-NTVLTWGNGTGGRLGTGD 102

Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPV 464
               T P     L + +V ++  G+ ++  LT  G VF +G+G    L   + S    P 
Sbjct: 103 EISRTQP----VLPEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPK 158

Query: 465 LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
           LV  L + ++V +S G  H+ AL+   +V+ WG    G+ G 
Sbjct: 159 LVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGH 200



 Score = 43.1 bits (100), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 20/165 (12%)

Query: 188 SKVYTWGC---------NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
            KV+T+G          N  +Q++ ++  +    R+ SL     H+ A       L+  G
Sbjct: 133 GKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAA-------LNIEG 185

Query: 239 GLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
            +  +G    G LG  +      P  V     +V+L+V +C   H+   T +GE+Y WG 
Sbjct: 186 DVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTV-ECGGYHMGVTTLDGELYMWGW 244

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
             +G+ G G  +  +   +++  L GKRV  V+ G SH+ A+  +
Sbjct: 245 NVYGQCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTMALVSN 289


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ +  L +  ++ +S GD H   L Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 44/330 (13%)

Query: 198 HHQIL---DEVRGKCSRPR---------LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R R         +Q+L + N+  +  G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G  + SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEVPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   +GA        +SCG+ HT VL QDG  V++ G  + G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H P  +TG  
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVISFGHGPSDTSKPTH-PEALTGNF 332

Query: 469 -----LSSHQIVDVSIGDSHVLALSQYNEV 493
                +S+  +VDV +   H+ A +  N V
Sbjct: 333 DIRCLISAEDLVDVQV--KHIFAGTYANFV 360



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVS 378
           G  + Q ++G  HS  +  +  + + G+   G+LG         P  +  L   +V  VS
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFS 437
           CG+ H+L +   G  V++ G+G+ G+LG  +  +++ TPK I  L   ++ +V  G   S
Sbjct: 82  CGKEHSLAVCHKGR-VFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHS 140

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL+ D  VF WG      LGL     S  +P  V  L    +  V+ G +H  ALS   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCG 200

Query: 492 EVYAWGSNTMGQCGQDNFSNPV--DQPSKVVGLEDVCVRQICAG 533
             + WGSN+ GQ      + PV  ++P  +  L+++ V  I  G
Sbjct: 201 TSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  EV  + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 K---GWLGLANTTIQPLPKRVPLE-AAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C + H   +  +G+V+++G    
Sbjct: 207 SNSAGQLALSGRNV-PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVISFGHG 315


>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
           mellifera]
          Length = 502

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 128/250 (51%), Gaps = 15/250 (6%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTED 340
           L VT +  VY+ G    G LG G+T S   PK I   L GK +   + G   H  A+TE+
Sbjct: 37  LIVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKE-LCGKDIKTFAYGKGPHVLALTEE 95

Query: 341 GLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
           G +Y+WG+  H  LG+       TP ++T L +  +  ++CG  H+L L+ DG  V++ G
Sbjct: 96  GKVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGE-VYAWG 154

Query: 399 SGNLGKLG-HEDTGKVT-TPKVIE-ALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
               G++G H+DT  V   P+ +   L   +V  +  G SFSV +T +G V+ WG     
Sbjct: 155 QNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGCNDVG 214

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LG+ +++  FH P  +T L+   I  V  G  H LALS    +Y WG N  GQ G    
Sbjct: 215 QLGIENNNDQFH-PCKITSLAKIVIEKVVCGSIHTLALSDEGVLYVWGDNNYGQLGLTTV 273

Query: 510 SNPVDQPSKV 519
              + +P+K+
Sbjct: 274 LLNIWKPTKL 283



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 23/249 (9%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG+ +T     PK++         + +     HVL +T EG+VYSWG   H +LG+  
Sbjct: 54  GCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEEGKVYSWGQNCHYELGNTF 113

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
                 P +I   L  + +  ++ G  HS A+T DG +Y WG+   G++G  D       
Sbjct: 114 NNQALTPGIIT-NLCNEFIIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHD-----DT 167

Query: 366 TLVTEL----------SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT 415
           TLV ++            V  +SCG+S ++V++ +G  V+S G  ++G+LG E+      
Sbjct: 168 TLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGE-VYSWGCNDVGQLGIENNNDQFH 226

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGL 469
           P  I +L K  + KV  G+  ++AL+ +G+++ WG      LGL +  ++   P  +   
Sbjct: 227 PCKITSLAKIVIEKVVCGSIHTLALSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKLEVP 286

Query: 470 SSHQIVDVS 478
              +++D++
Sbjct: 287 EMRRVLDIA 295



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 15/215 (6%)

Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGES-HTLVLSQDGHT 393
           VT+D ++Y  G    G LG GD +S   P  + EL   D+   + G+  H L L+++G  
Sbjct: 39  VTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLALTEEG-K 97

Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
           V+S G     +LG+    +  TP +I  L    +  +  G+  S+ALT DG V+ WG   
Sbjct: 98  VYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWGQN- 156

Query: 454 RSSSISFHTPV---------LVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
            S  +  H            L   L+  +++ +S GDS  + ++   EVY+WG N +GQ 
Sbjct: 157 TSGQVGCHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGCNDVGQL 216

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G +N +N    P K+  L  + + ++  GS+ ++A
Sbjct: 217 GIEN-NNDQFHPCKITSLAKIVIEKVVCGSIHTLA 250



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 8/174 (4%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYGK- 245
           KVY+WG N H+++ +    +   P + +   N  I  I  G   +  L + G +  +G+ 
Sbjct: 97  KVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTNDGEVYAWGQN 156

Query: 246 --GWLGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
             G +G  + T  +Q +P+++        +    C ++  + VT+ GEVYSWG  + G+L
Sbjct: 157 TSGQVGCHDDTTLVQDIPRKLNFTLTGKKVICISCGDSFSVVVTNNGEVYSWGCNDVGQL 216

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
           G  N   Q  P  I   L    + +V  G  H+ A++++G+LY WG+ ++G+LG
Sbjct: 217 GIENNNDQFHPCKIT-SLAKIVIEKVVCGSIHTLALSDEGVLYVWGDNNYGQLG 269



 Score = 70.9 bits (172), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 17/172 (9%)

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSV-AL 440
           +  L++++D   V+++GS   G LG  DT     PK I+ L    ++    G    V AL
Sbjct: 34  NEALIVTKD-KMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKGPHVLAL 92

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
           T +G V+ WG      LG   ++ +  TP ++T L +  I+D++ G  H LAL+   EVY
Sbjct: 93  TEEGKVYSWGQNCHYELGNTFNNQAL-TPGIITNLCNEFIIDIACGSHHSLALTNDGEVY 151

Query: 495 AWGSNTMGQCG-QDNFSNPVDQPSK----VVGLEDVCVRQICAGSLFSIAYT 541
           AWG NT GQ G  D+ +   D P K    + G + +C   I  G  FS+  T
Sbjct: 152 AWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKKVIC---ISCGDSFSVVVT 200


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    + VT   EV+ +GV     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEAIYVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLEL-LSGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  +     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALADDGE-VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TP  V  L S  ++ +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N SN +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 14/261 (5%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++ L +     S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  I   L  K+VT+V+ G  HS A+ +DG +Y WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V +++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVSIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPCRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V ++  G + ++ALT +GL++ WG      LG  + S +  +P  +  +   ++V+++
Sbjct: 233 VCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKS-NLLSPAQIM-VEKERVVEIA 290

Query: 479 IGDS-HV-LALSQYNEVYAWG 497
              S H   A +Q   VY WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P ++     I  ++   C   H + +  +GEVY+WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L  V    + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPCRVAALHSVCVLQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKSNLLSPAQI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 80/168 (47%), Gaps = 11/168 (6%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG---GLLV 242
           +VY WG N   Q+          PR  +   +I+    I  GQ  +  +   G   G   
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY 207

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
            G G LGL N   Q  P RV    ++  L +  C  AH L +T EG +Y+WG   +G+LG
Sbjct: 208 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIV-CGYAHTLALTDEGLLYAWGANTYGQLG 266

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 267 TGNKSNLLSPAQIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 126/257 (49%), Gaps = 14/257 (5%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S +  L VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSN 511
           AWG+NT GQ G  N +N
Sbjct: 256 AWGANTYGQLGTGNKNN 272



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 14/261 (5%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
             V ++  G + ++ALT +GL++ WG      LG  + + +  +P  +  +   +IV+++
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKN-NLLSPAHIM-VEKERIVEIA 290

Query: 479 IGDS-HV-LALSQYNEVYAWG 497
              S H   A +Q   VY WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K R+ ++  C     S A T  G V+ WG
Sbjct: 281 VEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +R+ +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERIVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 137/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT + EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSVALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
              G V+ WG      LGL  ++++  TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDTGEVYGWGYNGNGQLGL-GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKT 302



 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV + G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPTHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +      PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +   G  V+  G    G+LG  +     TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDTGE-VYGWGYNGNGQLGLGNNVNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +  TG   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNVNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPTHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ +  L +  ++ +S GD H   L Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 44/330 (13%)

Query: 198 HHQIL---DEVRGKCSRPR---------LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R R         +Q+L + N+  +  G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G  + SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEVPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   +GA        +SCG+ HT VL QDG  V++ G  + G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G    S   H P  +TG  
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVISFGHGPSDKSKPTH-PEALTGNF 332

Query: 469 -----LSSHQIVDVSIGDSHVLALSQYNEV 493
                +S+  +VDV +   H+ A +  N V
Sbjct: 333 DIRCLISAEDLVDVQV--KHIFAGTYANFV 360



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVS 378
           G  + Q ++G  HS  +  +  + + G+   G+LG         P  +  L   +V  VS
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFS 437
           CG+ H+L +   G  V++ G+G+ G+LG  +  +++ TPK I  L   ++ +V  G   S
Sbjct: 82  CGKEHSLAVCHKGR-VFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHS 140

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL+ D  VF WG      LGL     S  +P  V  L    +  V+ G +H  ALS   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCG 200

Query: 492 EVYAWGSNTMGQCGQDNFSNPV--DQPSKVVGLEDVCVRQICAG 533
             + WGSN+ GQ      + PV  ++P  +  L+++ V  I  G
Sbjct: 201 TSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  EV  + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 K---GWLGLANTTIQPLPKRVPLE-AAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C + H   +  +G+V+++G    
Sbjct: 207 SNSAGQLALSGRNV-PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVISFGHG 315


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           VL VT   EV+  G+   G LG G+  S   PK  +  L GK++  +S G   H    TE
Sbjct: 75  VLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKR-LDSLCGKKIACLSYGSGPHVVLATE 133

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TELSD--VGAVSCGESHTLVLSQDGHTVWS 396
           +G +YTWG   + +LG+G       P  V T L +  V  V+CG  H++VL+ DG  V++
Sbjct: 134 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE-VYT 192

Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T     P+ V   L+   V  +  G   S+A+  +G V+ WG     
Sbjct: 193 WGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNG 252

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL SS  +  TP  +  L   ++  V+ G +H L L+   ++YAWG+N+ GQ G  N 
Sbjct: 253 QLGLGSSG-NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 311

Query: 510 SN 511
           SN
Sbjct: 312 SN 313



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +      PKR+          +S  S  HV+  T EGEVY+WG   + +LG+G 
Sbjct: 93  GCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 152

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P  +   L  K+V +V+ G  HS  +T DG +YTWG  + G++G G   ++  P
Sbjct: 153 TNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIP 212

Query: 366 TLVTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             VT       V  ++CG+  ++ + ++G  V+  G    G+LG   +G   TP  I AL
Sbjct: 213 RRVTSCLQNKVVVNIACGQMCSMAVVENGE-VYVWGYNGNGQLGLGSSGNQPTPCRIAAL 271

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
           +  RV++V  G + ++ LT +G ++ WG      LG  + S   + P  VT      I  
Sbjct: 272 QGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY-PTTVTVDKDRVIEI 330

Query: 477 VSIGDSHV-LALSQYNEVYAWG 497
            +   +H   A +Q  +VY WG
Sbjct: 331 AACHSAHTSAAKTQSGQVYMWG 352



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 33/299 (11%)

Query: 129 QVDLIRSACLV----YLILVTLADDNIKPLGDRKSSNSNT-DIDSTSTPK---------- 173
           ++ LIR AC+       +L    +D +  LG   S    T D+ ST  PK          
Sbjct: 58  ELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKI 117

Query: 174 --LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAG 227
             L+Y  G    ++    +VYTWG N + Q+ +        P   S   +   +  +  G
Sbjct: 118 ACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACG 177

Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP---LEAAIVSLSVSKCSEAHV 281
              + +L S G +  +G    G +G  +T  QP+P+RV        +V+++   C +   
Sbjct: 178 SHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIA---CGQMCS 234

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + V   GEVY WG   +G+LG G++ +Q  P  I   L G RV +V+ G +H+  +T++G
Sbjct: 235 MAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEG 293

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
            +Y WG   +G+LG G+  ++  PT VT   D  +   +C  +HT         V+  G
Sbjct: 294 QIYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 15/171 (8%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
            +VYTWG N   Q+          PR + S   N  + +I  GQ C+  +   G + V+G
Sbjct: 188 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWG 247

Query: 245 ---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHG 299
               G LGL ++  QP P R+   AA+  + V +  C  AH L +T EG++Y+WG   +G
Sbjct: 248 YNGNGQLGLGSSGNQPTPCRI---AALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 304

Query: 300 KLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           +LG GN  +Q  P  +   +   RV +++A HS   SAA T+ G +Y WG+
Sbjct: 305 QLGTGNKSNQSYPTTVT--VDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 353


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ +  L +  ++ +S GD H   L Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 44/330 (13%)

Query: 198 HHQIL---DEVRGKCSRPR---------LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R R         +Q+L + N+  +  G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G  + SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEVPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   +GA        +SCG+ HT VL QDG  V++ G  + G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G    S   H P  +TG  
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVISFGHGPSDKSKPTH-PEALTGNF 332

Query: 469 -----LSSHQIVDVSIGDSHVLALSQYNEV 493
                +S+  +VDV +   H+ A +  N V
Sbjct: 333 DIRCLISAEDLVDVQV--KHIFAGTYANFV 360



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVS 378
           G  + Q ++G  HS  +  +  + + G+   G+LG         P  +  L   +V  VS
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFS 437
           CG+ H+L +   G  V++ G+G+ G+LG  +  +++ TPK I  L   ++ +V  G   S
Sbjct: 82  CGKEHSLAVCHKGR-VFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHS 140

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL+ D  VF WG      LGL     S  +P  V  L    +  V+ G +H  ALS   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCG 200

Query: 492 EVYAWGSNTMGQCGQDNFSNPV--DQPSKVVGLEDVCVRQICAG 533
             + WGSN+ GQ      + PV  ++P  +  L+++ V  I  G
Sbjct: 201 TSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  EV  + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 K---GWLGLANTTIQPLPKRVPLE-AAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C + H   +  +G+V+++G    
Sbjct: 207 SNSAGQLALSGRNV-PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVISFGHG 315


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 150/336 (44%), Gaps = 38/336 (11%)

Query: 148 DDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISV------------AHSKVYTWGC 195
           D  +     R+ + +  D+ +++ P+   N+ D DI              +   VY+WG 
Sbjct: 16  DGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGW 75

Query: 196 N----LHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWL 248
                L H  L  +         +     + +I  G   +  +   G L V+G+   G L
Sbjct: 76  GSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQL 135

Query: 249 GLAN---TTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           GL        + LP + P+       ++ K  C   H   +TS G VY WG G+ G+LG 
Sbjct: 136 GLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGI 195

Query: 304 GNT----------LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
           G+           +   RP L+     G++V QV+ G  HSAAVTE G +Y WG+ D+G 
Sbjct: 196 GSVWMKDPENESLMGASRPHLLKA-FNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGM 254

Query: 354 LGHGDLKSRHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
           LG G    +  P  +    D+    VSCG  HT+V+++ G   ++ G G  G+LG  DT 
Sbjct: 255 LGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSG-DCYAFGRGEYGRLGLGDTK 313

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
             T P +++AL+   V +   G S ++ +T DG  +
Sbjct: 314 SRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAY 349



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 110/229 (48%), Gaps = 26/229 (11%)

Query: 188 SKVYTWGCNLHHQIL----------DEVRGKCSRPRLQSL--PSNIRHIEAGQFCTFLLD 235
            +VY WG     Q+           +E     SRP L        +  +  G F +  + 
Sbjct: 180 GRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVT 239

Query: 236 STGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
             G + V+GK   G LG+  ++ Q +PKR+     I  L VS C   H + V   G+ Y+
Sbjct: 240 EQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVS-CGGWHTVVVAKSGDCYA 298

Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
           +G GE+G+LG G+T S+ RP L+   L GK V Q + G SH+  VT DG  Y  G  DHG
Sbjct: 299 FGRGEYGRLGLGDTKSRTRPHLVKA-LKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHG 357

Query: 353 RLGHGDLKSRHTPTLVTELSDVGAV-----SCGESHTLVLSQDGHTVWS 396
           RLG  D+K+   PT +    D+G +     S G +H++ L      ++S
Sbjct: 358 RLGLADMKALGVPTRL----DLGPIPVRQFSAGGAHSVALMHSSRPIFS 402



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 170/401 (42%), Gaps = 65/401 (16%)

Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM------------GGLYGKRVTQVSAGHSH 333
           SE  V ++G  + G+LG G   ++RRP L +            G L  + +  VS G  H
Sbjct: 4   SECVVTAFGCNDDGQLGTG---AKRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRH 60

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT----ELSDVGAVSCGESHTLVLSQ 389
           + A+T  G +Y+WG G  G+LGHGDLK  + P  +     E  +V  +SCG  H+  +++
Sbjct: 61  TMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTK 120

Query: 390 DGHTVWSMGSGNLGKLG--------HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
           DG T++  G  + G+LG        HE    V  P + E      + KV  G + + ALT
Sbjct: 121 DG-TLYVWGESHWGQLGLPKEYEAAHESL-PVKCP-MPEGEAGETIVKVSCGGTHTAALT 177

Query: 442 WDGLVFWWG------LGLRS---------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
             G V+ WG      LG+ S         S +    P L+   +  ++V V+ G  H  A
Sbjct: 178 SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAA 237

Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQ--PSKVVGLEDVCVRQICAGSLFSIAYTVPP 544
           +++   VY WG    G  G    S   DQ  P ++   +D+ V ++  G   ++      
Sbjct: 238 VTEQGHVYVWGKEDYGMLGVGQSS---DQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSG 294

Query: 545 SNSALSSA-FTPLCVD-----VRPHTFTLIREFLEQYSAC------FETGDYIPFCS-KV 591
              A     +  L +       RPH    ++      +AC      F T D   + + + 
Sbjct: 295 DCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRP 354

Query: 592 THAQFILLLLRLLS--SHLYLALIGARSSSVLGNETAALRH 630
            H +  L  ++ L   + L L  I  R  S  G  + AL H
Sbjct: 355 DHGRLGLADMKALGVPTRLDLGPIPVRQFSAGGAHSVALMH 395


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 130/275 (47%), Gaps = 16/275 (5%)

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           E H L + +   V S G    G+LG         P+ I   L    V  VS G  HS AV
Sbjct: 32  ERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA-LETLNVDLVSCGKEHSLAV 90

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
              G ++ WG G  G+LG G+ K    TP  +T L+ +    VSCG  H+L LS+D   V
Sbjct: 91  CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQ-V 149

Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
           +S G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G  F WG   
Sbjct: 150 FSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                L  R+  +  + P+ +  L +  ++ +S GD H   L Q  +V+ +G N+ GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
                 P  +  ++V   D  V QI  GS  ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302



 Score = 99.0 bits (245), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 44/330 (13%)

Query: 198 HHQIL---DEVRGKCSRPR---------LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           +H++L   D  RG+  R R         +Q+L + N+  +  G+  +  +   G +  +G
Sbjct: 41  NHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWG 100

Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
              +G LG+     I   PK++     I  + VS C   H L ++ + +V+SWG   HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159

Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
           LG G  + SQ  P+ +   L G  + QV+AG +HS A++  G  + WG    G+L    L
Sbjct: 160 LGLGKEVPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215

Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
             R+ P    +   +GA        +SCG+ HT VL QDG  V++ G  + G+LG+  T 
Sbjct: 216 SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTP 274

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
           +   P+++E +    V ++  G+  ++A     G V  +G G   +S   H P  +TG  
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVISFGHGPSDTSKPTH-PEALTGNF 332

Query: 469 -----LSSHQIVDVSIGDSHVLALSQYNEV 493
                +S+  +VDV +   H+ A +  N V
Sbjct: 333 DIRCLISAEDLVDVQV--KHIFAGTYANFV 360



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 321 GKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVS 378
           G  + Q ++G  HS  +  +  + + G+   G+LG         P  +  L   +V  VS
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 379 CGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT-TPKVIEALRKFRVRKVCAGTSFS 437
           CG+ H+L +   G  V++ G+G+ G+LG  +  +++ TPK I  L   ++ +V  G   S
Sbjct: 82  CGKEHSLAVCHKGR-VFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHS 140

Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
           +AL+ D  VF WG      LGL     S  +P  V  L    +  V+ G +H  ALS   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCG 200

Query: 492 EVYAWGSNTMGQCGQDNFSNPV--DQPSKVVGLEDVCVRQICAG 533
             + WGSN+ GQ      + PV  ++P  +  L+++ V  I  G
Sbjct: 201 TSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCG 244



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 9/173 (5%)

Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
            + GE H+L+L  + H V S G  + G+LG     +   P+ I+AL    V  V  G   
Sbjct: 28  AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEH 86

Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
           S+A+   G VF WG G            ISF TP  +T L+  +I+ VS G  H LALS+
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            ++V++WG N+ GQ G          P +V  LE + + Q+ AG   S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 17/174 (9%)

Query: 188 SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
           S+V++WG N H Q  +  EV  + S  R++SL    +  + AG   +F L   G    +G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206

Query: 245 K---GWLGLANTTIQPLPKRVPLE-AAIVSLSV--SKCSEAHVLTVTSEGEVYSWGVGEH 298
               G L L+   + P+    PL   A+ +L V    C + H   +  +G+V+++G    
Sbjct: 207 SNSAGQLALSGRNV-PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSS 265

Query: 299 GKLGHGNTLSQRRPKLI--MGGLYGKRVTQVSAGHSHS-AAVTEDGLLYTWGEG 349
           G+LG+  T  +R P+L+  + GL    V+Q+  G  H+ A V   G + ++G G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGL----VSQIDCGSYHTLAYVHTTGQVISFGHG 315


>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
           harrisii]
          Length = 531

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    + VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEAIYVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TP  V  L S  ++ +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N SN +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEVY+WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L  V    + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPCRVAALHSVCVLQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKSNLLSPAQI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 11/172 (6%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +VY WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
           G    G G LGL N   Q  P RV    ++  L +  C  AH L +T EG +Y+WG   +
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIV-CGYAHTLALTDEGLLYAWGANTY 262

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 263 GQLGTGNKSNLLSPAQIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score =  100 bits (249), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 14/242 (5%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
           VL VT   EV+  G+   G LG G+  S   PK  +  L GK++  +S G   H    TE
Sbjct: 74  VLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKR-LDSLCGKKIACLSYGSGPHVVLATE 132

Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLV-TELSD--VGAVSCGESHTLVLSQDGHTVWS 396
           +G +YTWG   + +LG+G       P  V T L +  V  V+CG  H++VL+ DG  V++
Sbjct: 133 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE-VYT 191

Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
            G  N G++G   T     P+ V   L+   V  +  G   S+A+  +G V+ WG     
Sbjct: 192 WGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNG 251

Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
            LGL SS  +  TP  +  L   ++  V+ G +H L L+   ++YAWG+N+ GQ G  N 
Sbjct: 252 QLGLGSSG-NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNK 310

Query: 510 SN 511
           SN
Sbjct: 311 SN 312



 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 14/263 (5%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           G LG  +      PKR+          +S  S  HV+  T EGEVY+WG   + +LG+G 
Sbjct: 92  GCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 151

Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
           T     P  +   L  K+V +V+ G  HS  +T DG +YTWG  + G++G G   ++  P
Sbjct: 152 TNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIP 211

Query: 366 TLVTELSD---VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
             VT       V  ++CG+  ++ + ++G  V+  G    G+LG   +G   TP  I AL
Sbjct: 212 RRVTSCLQNKVVVNIACGQMCSMAVVENGE-VYVWGYNGNGQLGLGSSGNQPTPCRIAAL 270

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
           +  RV++V  G + ++ LT +G ++ WG      LG  + S   + P  VT +   ++V+
Sbjct: 271 QGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSY-PTTVT-VDKDRVVE 328

Query: 477 VSIGDSH--VLALSQYNEVYAWG 497
           ++   S     A +Q  +VY WG
Sbjct: 329 IAACHSAHTSAAKTQSGQVYMWG 351



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 33/299 (11%)

Query: 129 QVDLIRSACLV----YLILVTLADDNIKPLGDRKSSNSNT-DIDSTSTPK---------- 173
           ++ LIR AC+       +L    +D +  LG   S    T DI ST  PK          
Sbjct: 57  ELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKI 116

Query: 174 --LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAG 227
             L+Y  G    ++    +VYTWG N + Q+ +        P   S   +   +  +  G
Sbjct: 117 ACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACG 176

Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP---LEAAIVSLSVSKCSEAHV 281
              + +L S G +  +G    G +G  +T  QP+P+RV        +V+++   C +   
Sbjct: 177 SHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIA---CGQMCS 233

Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
           + V   GEVY WG   +G+LG G++ +Q  P  I   L G RV +V+ G +H+  +T++G
Sbjct: 234 MAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEG 292

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
            +Y WG   +G+LG G+  ++  PT VT   D  V   +C  +HT         V+  G
Sbjct: 293 QIYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 15/170 (8%)

Query: 189 KVYTWGCNLHHQILDEVRGKCSRPR-LQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG- 244
           +VYTWG N   Q+          PR + S   N  + +I  GQ C+  +   G + V+G 
Sbjct: 188 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY 247

Query: 245 --KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGK 300
              G LGL ++  QP P R+   AA+  + V +  C  AH L +T EG++Y+WG   +G+
Sbjct: 248 NGNGQLGLGSSGNQPTPCRI---AALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQ 304

Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           LG GN  +Q  P  +   +   RV +++A HS   SAA T+ G +Y WG+
Sbjct: 305 LGTGNKSNQSYPTTVT--VDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQ 352


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 21/336 (6%)

Query: 201 ILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTI 255
           I   ++G  + P+     S+  I+ +  G   +  L   G +   G   KG LG      
Sbjct: 15  ISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN 74

Query: 256 QPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKL 314
           +P       +  IV ++   C E+H L ++ +G+++SWG G  G+LGH  T  S   P+L
Sbjct: 75  KPEQIGALADQHIVHVA---CGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRL 131

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSD 373
           I   L  + + QVS G+ H  A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  
Sbjct: 132 IK-KLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEG 190

Query: 374 V--GAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           +    V+ G +H+  LS  G  V+  G  N G+LG  D     +P  ++ LR  +V  + 
Sbjct: 191 IPLAQVAAGGAHSFALSLSG-AVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYIS 249

Query: 432 AGTSFSVALTWDGLVFWWGLG----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLA 486
            G   +  LT  G VF +G G    L   S++    P  V  L   ++  ++ G  H LA
Sbjct: 250 CGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLA 309

Query: 487 L-SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
                  +YA+G    GQ G  +  N V  PS V G
Sbjct: 310 FVPSSGLIYAFGCGARGQLGTGHTCN-VKCPSPVKG 344



 Score = 91.3 bits (225), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 20/214 (9%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTE------LSD--VGAVSCGESHTLVLSQDGHTV 394
           +  WG   +  LGH    S +   +VTE      +SD  +  V+CG +H++ L +DG  V
Sbjct: 1   MLCWG---YWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGE-V 56

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
           ++ GS   G+LGHE  G    P+ I AL    +  V  G S S+AL+  G +F WG    
Sbjct: 57  YTCGSNTKGQLGHEREG--NKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 114

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
             LG  ++  S   P L+  L+   I+ VS G+ H +AL+   + + WG N  GQ G   
Sbjct: 115 GQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGK 174

Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
                  P +V  LE + + Q+ AG   S A ++
Sbjct: 175 EFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSL 208



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 185 VAHSKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLL 241
            A  + +TWG N H Q  +  E   + S  R++SL    +  + AG   +F L  +G + 
Sbjct: 154 AADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVF 213

Query: 242 VYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
            +G+   G LGL++ T +  P  V L      + +S C E H   +T  G V+++G G  
Sbjct: 214 GWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSF 272

Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA-VTEDGLLYTWGEGDHGRLGHG 357
           G+LGH +   +  P+ ++  L G  VTQ++ G  H+ A V   GL+Y +G G  G+LG G
Sbjct: 273 GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTG 331

Query: 358 DLKSRHTPTLV 368
              +   P+ V
Sbjct: 332 HTCNVKCPSPV 342


>gi|405970894|gb|EKC35758.1| X-linked retinitis pigmentosa GTPase regulator-like protein
            [Crassostrea gigas]
          Length = 1288

 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 152/344 (44%), Gaps = 60/344 (17%)

Query: 218  PSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
            P ++  +  G+  T+   S G L   G G L L NT   P          I  LSVS C 
Sbjct: 708  PQHVGVVRNGELYTWGKTSQGRL---GHGDLALENTVSPPCRVETLHMLQIKVLSVS-CG 763

Query: 278  EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
              H + +T +G VY WG  ++G++G G T    RP                         
Sbjct: 764  GEHTVALTQQG-VYGWGSSKYGQVGTGTTHIYSRP------------------------- 797

Query: 338  TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTVW 395
                ++Y+WG G HG+LGHG+++   TPT VT L+  +V  +  G  H+LVL++ G  V+
Sbjct: 798  ----IVYSWGWGVHGQLGHGNIEDALTPTKVTFLTSLNVSHIQAGHCHSLVLTEQG-VVY 852

Query: 396  SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
            S G G  G+LG  +  K + P  +  L + ++  V      +VA+T    V+ WG     
Sbjct: 853  SFGCGFFGQLGIGNNRKSSVPVKVHTLPE-KIAIVATRYFHNVAVTHSNKVYTWGCHPYN 911

Query: 452  ---------GLRSSSISFHTPV--------LVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
                       R +      PV        + TG    +I  V++G SH L ++   +VY
Sbjct: 912  LRFVAHAARKARQAGKFMGDPVERYLLPEVVDTGYVHGRITKVAVGSSHGLLMTLDGDVY 971

Query: 495  AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSI 538
            +WG N  GQ G +N    + QP+ +  + D  +  + +G  F++
Sbjct: 972  SWGRNAEGQIG-NNSKYEMKQPNIITQINDRQMAHLASGGEFNV 1014



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 31/242 (12%)

Query: 190  VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
            VY+WG  +H Q+    +    +  ++  L S N+ HI+AG   + +L   G +  +G G+
Sbjct: 799  VYSWGWGVHGQLGHGNIEDALTPTKVTFLTSLNVSHIQAGHCHSLVLTEQGVVYSFGCGF 858

Query: 248  ---LGLANTTIQPLPKRV---PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG------- 294
               LG+ N     +P +V   P + AIV+         H + VT   +VY+WG       
Sbjct: 859  FGQLGIGNNRKSSVPVKVHTLPEKIAIVATRY-----FHNVAVTHSNKVYTWGCHPYNLR 913

Query: 295  --------VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW 346
                      + GK           P+++  G    R+T+V+ G SH   +T DG +Y+W
Sbjct: 914  FVAHAARKARQAGKFMGDPVERYLLPEVVDTGYVHGRITKVAVGSSHGLLMTLDGDVYSW 973

Query: 347  GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
            G    G++G+        P ++T+++D  +  ++ G    + +  +G  VW  G  + G+
Sbjct: 974  GRNAEGQIGNNSKYEMKQPNIITQINDRQMAHLASGGEFNVTMDTEG-LVWVWGKNDFGQ 1032

Query: 405  LG 406
            LG
Sbjct: 1033 LG 1034



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 90/209 (43%), Gaps = 44/209 (21%)

Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT---PTLVTELS----DVGAVSC 379
           V  G  H   V  +G LYTWG+   GRLGHGDL   +T   P  V  L      V +VSC
Sbjct: 704 VGTGPQH-VGVVRNGELYTWGKTSQGRLGHGDLALENTVSPPCRVETLHMLQIKVLSVSC 762

Query: 380 GESHTLVLSQDGHTVW----------------------SMGSGNLGKLGHEDTGKVTTPK 417
           G  HT+ L+Q G   W                      S G G  G+LGH +     TP 
Sbjct: 763 GGEHTVALTQQGVYGWGSSKYGQVGTGTTHIYSRPIVYSWGWGVHGQLGHGNIEDALTPT 822

Query: 418 VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL---------RSSSISFHTPVLVTG 468
            +  L    V  + AG   S+ LT  G+V+ +G G          R SS+    PV V  
Sbjct: 823 KVTFLTSLNVSHIQAGHCHSLVLTEQGVVYSFGCGFFGQLGIGNNRKSSV----PVKVHT 878

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
           L   +I  V+    H +A++  N+VY WG
Sbjct: 879 LPE-KIAIVATRYFHNVAVTHSNKVYTWG 906


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 38/256 (14%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKL---GHGNTLSQRRPKLIMGGLYG----------- 321
           C   H L +T +G ++ +G+G  GKL        L Q + K+  G L             
Sbjct: 275 CGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNVYEPTE 334

Query: 322 ------KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG 375
                 ++  QV+ G SHS A+T++G ++TWG+   G+LG G    +  PT++       
Sbjct: 335 LLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTMIIIEVMAT 394

Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
           ++  G+ H+  +S D   +++ G+G   +LGH  T     PK +  L    V  V  G +
Sbjct: 395 SICSGDQHSAFIS-DEKELYTWGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMT 453

Query: 436 FSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
            ++A+T +G V+ WG      LG++ ++ S H P             VS G  H +AL+ 
Sbjct: 454 HTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPTR-----------VSAGGLHSMALTD 502

Query: 490 YNEVYAWGSNTMGQCG 505
              +Y+WGS+  G  G
Sbjct: 503 QGILYSWGSSKGGVLG 518



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 77/320 (24%)

Query: 258  LPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR-PKLI 315
             P  +P  +  I+ +S   CS  H + ++ +G  YSWG  ++ +LG G        P+ I
Sbjct: 780  FPFLIPYFKNKIIFMS---CSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKI 836

Query: 316  MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT---PTLVTELS 372
             G L  KR+   +     SA +T+ G ++T+G  D G LGH D K+ +    P ++ ++ 
Sbjct: 837  QGALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGH-DEKNYYVVSEPKMINDIP 895

Query: 373  DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-------------------------- 406
             +  ++ G    + +++    +++ G+   G+LG                          
Sbjct: 896  PMIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQITNNNMNMNQFGPDIDIDDSQDEI 955

Query: 407  ---------HEDTGKVTTPKV--------IEALRKFRVRKVCAGTSFSVALTWDGLVFWW 449
                      E   K+T  ++        IE  RK ++R++  G   SVA+  D L   +
Sbjct: 956  KQKEKKIDLDEQNKKITKNQIIYKPQKVKIENDRKIQIRQIGMGMFHSVAI--DDLGHLY 1013

Query: 450  GLGLRSSSISFHTPVLVTGLS---------------SHQIVDVSIGDSHVLALSQ----- 489
              GLR  S      +   GLS               +HQ   VS+ + H LAL+Q     
Sbjct: 1014 SCGLRKFS-GLAESLSKEGLSGFDDTFIYLKKDHMLNHQFQQVSVSEYHTLALTQDQTGE 1072

Query: 490  -YNEVYAWGSNTMGQ-CGQD 507
              N V+ WG   +G  C +D
Sbjct: 1073 FNNVVFGWGLCNLGNLCLKD 1092



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 17/175 (9%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
           + +++TWG N   Q+    R    +P +  +      I +G   +  +     L  +G G
Sbjct: 359 NGQIFTWGKNTRGQLGQGHRNDQLKPTMIIIEVMATSICSGDQHSAFISDEKELYTWGNG 418

Query: 247 W---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG- 302
               LG   TT +  PK+V +   +    VS C   H L +T+EG VY+WG G  GKLG 
Sbjct: 419 QYFRLGHGVTTDELYPKKVVVLEDVYVTHVS-CGMTHTLAITNEGFVYAWGDGMSGKLGV 477

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
             N  S   P            T+VSAG  HS A+T+ G+LY+WG    G LG G
Sbjct: 478 QENNKSLHLP------------TRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 105/251 (41%), Gaps = 52/251 (20%)

Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL---------------------GHGDLKSR 362
           +  VS GH H+  +T+ G ++ +G G  G+L                     G+ +  + 
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329

Query: 363 HTPT--LVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVTTPKV 418
           + PT  LV        V+CG SH++ L+ +G  +++ G    G+LG  H +     T  +
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTDNGQ-IFTWGKNTRGQLGQGHRNDQLKPTMII 388

Query: 419 IEALRKFRVRKVCAGTSFSVAL-------TW-DGLVFWWGLGLRSSSISFHTPVLVTGLS 470
           IE +       +C+G   S  +       TW +G  F  G G+ +  +    P  V  L 
Sbjct: 389 IEVM----ATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDEL---YPKKVVVLE 441

Query: 471 SHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI 530
              +  VS G +H LA++    VYAWG    G+ G    +  +  P++V           
Sbjct: 442 DVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPTRV----------- 490

Query: 531 CAGSLFSIAYT 541
            AG L S+A T
Sbjct: 491 SAGGLHSMALT 501


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  114 bits (284), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G+  S   PK  +  L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKK-LDALCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKT 302



 Score =  100 bits (250), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 233 LLDSTGGLLVYGKGWLGLA----NTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSE 287
           +L ST   +VY  G  G +     TT Q L P +V     I  +    C   H + + ++
Sbjct: 87  VLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAAD 146

Query: 288 GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           GEV++WG    G++G G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWG 206

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL 405
              +G+LG G+  ++ TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+L
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQL 265

Query: 406 GHEDTGKVTTPKVIEALRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           G  +   + +P  I  + K RV ++  C     S A T  G V+ WG
Sbjct: 266 GTGNKNNLLSPAHI-MVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 129/266 (48%), Gaps = 15/266 (5%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A I    V   S    + +T   EV+ +G+     LG G+  S   PK +   L GKR+ 
Sbjct: 18  ATIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLES-LSGKRIR 76

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG +Y WG   + +LG+G      TP  V     +  V  V+CG 
Sbjct: 77  SLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGS 136

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H+L LS DG  V++ G  N G++G   T    TP KV   L+   V  +  G + SVA+
Sbjct: 137 HHSLALSSDGD-VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAI 195

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TP  V  L    I+ ++ G +H LAL+    +Y
Sbjct: 196 VDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALQGVCIMQIACGYAHTLALTDEGLMY 254

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVV 520
           +WG+NT GQ G  N SN +  P +++
Sbjct: 255 SWGANTYGQLGTGNKSNQLS-PGQIL 279



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H L ++S+G+VY+WG    G++G 
Sbjct: 102 GYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGS 161

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L  K V  ++ G + S A+ ++G +Y WG   +G+LG G+  ++ 
Sbjct: 162 GSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL 221

Query: 364 TPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L  V    ++CG +HTL L+ +G  ++S G+   G+LG  +     +P  I  
Sbjct: 222 TPCRVAALQGVCIMQIACGYAHTLALTDEG-LMYSWGANTYGQLGTGNKSNQLSPGQI-L 279

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  GLV+ WG
Sbjct: 280 MEKERVVEIAACHSAHTSAAKTQSGLVYMWG 310



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 111/206 (53%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++   +     S+S  S  HV+  T +GEVY+WG   + +LG+G T 
Sbjct: 53  LGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTN 112

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A++ DG +Y WG  + G++G G   ++ TP  
Sbjct: 113 QGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRK 172

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           V+   +   V +++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL+ 
Sbjct: 173 VSNCLQTKIVVSIACGQTSSVAIVDNGE-VYGWGYNGNGQLGLGNNGNQLTPCRVAALQG 231

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             + ++  G + ++ALT +GL++ WG
Sbjct: 232 VCIMQIACGYAHTLALTDEGLMYSWG 257



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 81/167 (48%), Gaps = 11/167 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIR-HIEAGQFCTFLLDSTG---GLLVY 243
           VY WG N   Q+          PR  S  L + I   I  GQ  +  +   G   G    
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYN 207

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G G LGL N   Q  P RV     +  + ++ C  AH L +T EG +YSWG   +G+LG 
Sbjct: 208 GNGQLGLGNNGNQLTPCRVAALQGVCIMQIA-CGYAHTLALTDEGLMYSWGANTYGQLGT 266

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
           GN  +Q  P  I+  +  +RV +++A HS   SAA T+ GL+Y WG+
Sbjct: 267 GNKSNQLSPGQIL--MEKERVVEIAACHSAHTSAAKTQSGLVYMWGQ 311


>gi|384248125|gb|EIE21610.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 609

 Score =  114 bits (284), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 25/259 (9%)

Query: 254 TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK 313
           +IQ    R+PL+    SL      +A++L+ T+  EVYSWG G + +LG      Q  P 
Sbjct: 93  SIQDFKGRIPLDLLSASL------KAYLLSGTAS-EVYSWGNGANYQLGTEAEGLQLTPN 145

Query: 314 LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD--LKSRHTPTLVTEL 371
             +  L+G  +  ++A   HSAAV +DG LYTWG G  GRLGH +  + S  +  ++  L
Sbjct: 146 R-LDSLHGTPIVALAAAKFHSAAVAKDGSLYTWGFGRGGRLGHPEFHIHSGESAVILPRL 204

Query: 372 ------SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
                   V AV+ G+ HT+ +++ G  +++ GS   G+LG+       TP+ + ++R+ 
Sbjct: 205 VALPGRRTVAAVATGKHHTVAVTRAGE-LFTWGSNRDGRLGYTAVDSQPTPRRVTSMRQ- 262

Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGLR-------SSSISFHTPVLVTGLSSHQIVDVS 478
           RV  V A    +V L   G V+ WG  L+       S S S   P +V  +    I  V+
Sbjct: 263 RVMAVAAANRHTVVLAEGGTVYSWGSNLQGQLGYGTSDSASNAVPRIVEAMVGKTITAVA 322

Query: 479 IGDSHVLALSQYNEVYAWG 497
               H + L+   +VY WG
Sbjct: 323 AAKRHTVVLTVEGDVYTWG 341



 Score =  105 bits (262), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 61/278 (21%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLV 242
           +S   S+VY+WG   ++Q+  E  G      LQ  P+              LDS  G   
Sbjct: 115 LSGTASEVYSWGNGANYQLGTEAEG------LQLTPNR-------------LDSLHG--- 152

Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
                                    IV+L+ +K    H   V  +G +Y+WG G  G+LG
Sbjct: 153 -----------------------TPIVALAAAK---FHSAAVAKDGSLYTWGFGRGGRLG 186

Query: 303 ------HGNTLSQRRPKLIMGGLYGKR-VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG 355
                 H    +   P+L+   L G+R V  V+ G  H+ AVT  G L+TWG    GRLG
Sbjct: 187 HPEFHIHSGESAVILPRLV--ALPGRRTVAAVATGKHHTVAVTRAGELFTWGSNRDGRLG 244

Query: 356 HGDLKSRHTPTLVTELSD-VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH--EDTGK 412
           +  + S+ TP  VT +   V AV+    HT+VL++ G TV+S GS   G+LG+   D+  
Sbjct: 245 YTAVDSQPTPRRVTSMRQRVMAVAAANRHTVVLAEGG-TVYSWGSNLQGQLGYGTSDSAS 303

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
              P+++EA+    +  V A    +V LT +G V+ WG
Sbjct: 304 NAVPRIVEAMVGKTITAVAAAKRHTVVLTVEGDVYTWG 341



 Score = 69.7 bits (169), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 22/217 (10%)

Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
           +Y+WG G + +LG      + TP  +  L  + + A++  + H+  +++DG ++++ G G
Sbjct: 122 VYSWGNGANYQLGTEAEGLQLTPNRLDSLHGTPIVALAAAKFHSAAVAKDG-SLYTWGFG 180

Query: 401 NLGKLGHED------TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG---- 450
             G+LGH +         V  P+++    +  V  V  G   +VA+T  G +F WG    
Sbjct: 181 RGGRLGHPEFHIHSGESAVILPRLVALPGRRTVAAVATGKHHTVAVTRAGELFTWGSNRD 240

Query: 451 --LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--- 505
             LG  +   S  TP  VT +   +++ V+  + H + L++   VY+WGSN  GQ G   
Sbjct: 241 GRLGYTAVD-SQPTPRRVTSMR-QRVMAVAAANRHTVVLAEGGTVYSWGSNLQGQLGYGT 298

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
            D+ SN V  P  V  +    +  + A    ++  TV
Sbjct: 299 SDSASNAV--PRIVEAMVGKTITAVAAAKRHTVVLTV 333



 Score = 42.4 bits (98), Expect = 2.6,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 53/262 (20%)

Query: 164 TDIDSTSTPKLTYNIGDTDISVAHSK-----------VYTWGCNLHHQI----LDEVRGK 208
           T +DS  TP+   ++    ++VA +            VY+WG NL  Q+     D     
Sbjct: 246 TAVDSQPTPRRVTSMRQRVMAVAAANRHTVVLAEGGTVYSWGSNLQGQLGYGTSDSASNA 305

Query: 209 CSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAA- 267
             R     +   I  + A +  T +L   G +  +G   +          PKRV L  A 
Sbjct: 306 VPRIVEAMVGKTITAVAAAKRHTVVLTVEGDVYTWGHRVV---------TPKRVQLAGAR 356

Query: 268 ------------------IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
                             +     S+ +  H + V + G  +S  + + G +    +   
Sbjct: 357 DVARAANASGASAGGWEVVFHRGQSQVARPHAVAVCA-GAAHSACLDQSGAVLAWRSADP 415

Query: 310 R-RPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTW-GEGDHGRL--GHGDLKSRHTP 365
           R   + + G L GKRV  ++AG   +A VT++G +Y W G      L  G G   SR   
Sbjct: 416 RLHVQEVGGDLAGKRVVHIAAGKYRTATVTDEGDVYMWEGWSKPAELSAGRGCALSR--- 472

Query: 366 TLVTELSDVGAVSCGESHTLVL 387
             V  +  V   + GE H+L L
Sbjct: 473 --VEGVKRVTHAAVGEKHSLAL 492


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G+  S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   RV  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           AWG+NT GQ G  N +N +     +V  E V     C  +  S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302



 Score =  100 bits (249), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
           LG  +     +PK++         S+S  S  HVL  T +G VY+WG   + +LG+G T 
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
               P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G G   ++ TP  
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173

Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
           VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G   TP  + AL  
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232

Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
             V ++  G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
           G   LG   T     P +V     I  +    C   H + + ++GEV++WG    G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
           G+T +Q  P+ +   L+ KRV  ++ G + S AV ++G +Y WG   +G+LG G+  ++ 
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222

Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
           TP  V  L    V  + CG +HTL L+ +G  +++ G+   G+LG  +   + +P  I  
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280

Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
           + K RV ++  C     S A T  G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 310

 Score =  114 bits (284), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 86/272 (31%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           ++T TS   + +WG GE G+LG G T  ++    ++  L    V  V +G  +S A+ +D
Sbjct: 1   MVTATS---IIAWGSGEDGQLGIG-TNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDD 56

Query: 341 GLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSM 397
           G ++TWG    G LGH  + K+ + P+ V  L++V     + G  H L +   G   ++ 
Sbjct: 57  GTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRA-YAW 115

Query: 398 GSGNLGKLGHE----DTGKVTTPKVIEALR---KFRVRKVCAGTSFSVALTWDGLVFWWG 450
           G    G+ G E    + G+     ++   R   K  VR+V AG + SV LT +G V+ WG
Sbjct: 116 GGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 451 LGLRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
                  I     PV V GL + ++  +++G  H LAL +   + AWG+N  GQ G  + 
Sbjct: 176 QPWPPGDIKQISVPVRVQGLENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD- 232

Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
           + P   P  V GL+D+ +  I AG   S A T
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALT 264



 Score =  101 bits (251), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 28/263 (10%)

Query: 282 LTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED 340
           L +  +G +++WG  + G LGH   T ++  P  +   L   ++TQ + G  H  AV + 
Sbjct: 51  LAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQ 109

Query: 341 GLLYTWGEGDHGRLGHGDLKSRH---------TPTLVTELSDVGAVSCGESHTLVLSQDG 391
           G  Y WG  ++G+ G   LK             P        V  V+ G +H++VL+++G
Sbjct: 110 GRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREG 169

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
           H VW+ G          D  +++ P  ++ L    VR +  G   ++AL  DG +  WG 
Sbjct: 170 H-VWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLALEEDGRLLAWGN 222

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LG   +  + H PV V GL    +VD++ G  H  AL+   EVY WG    G+ G
Sbjct: 223 NEYGQLGTGDTQPTSH-PVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281

Query: 506 ---QDNFSNPVDQPSKVVGLEDV 525
               D  S  V Q   ++  ED+
Sbjct: 282 LGDNDKSSKMVPQKVNLLAEEDI 304



 Score = 76.3 bits (186), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 16/198 (8%)

Query: 187 HSKVYTWGCNLHHQILDE---------VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDST 237
             + Y WG N + Q  +E         VR     P+  +    +R + AG   + +L   
Sbjct: 109 QGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTRE 168

Query: 238 GGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
           G +  +G+ W       I  +P RV     + ++ +      H L +  +G + +WG  E
Sbjct: 169 GHVWTWGQPWPPGDIKQIS-VPVRV---QGLENVRLIAVGAFHNLALEEDGRLLAWGNNE 224

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +G+LG G+T     P  + G L    +  ++AG  HS A+T+ G +Y WG G+HGRLG G
Sbjct: 225 YGQLGTGDTQPTSHPVPVQG-LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG 283

Query: 358 --DLKSRHTPTLVTELSD 373
             D  S+  P  V  L++
Sbjct: 284 DNDKSSKMVPQKVNLLAE 301



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 63/253 (24%), Positives = 100/253 (39%), Gaps = 60/253 (23%)

Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLG-LANTTIQPLPKRVPLEAAIVSLSV 273
           P ++R + +G   +  +   G +  +G   +G LG    T  + +P RV    A V ++ 
Sbjct: 37  PYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVK-ALANVKITQ 95

Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ-----RR---------PKLIM--- 316
           +     H L V  +G  Y+WG  E+G+ G      +     RR         PKL +   
Sbjct: 96  AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQV 155

Query: 317 --GGLYGKRVTQ---------------------------------VSAGHSHSAAVTEDG 341
             GG +   +T+                                 ++ G  H+ A+ EDG
Sbjct: 156 AAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDG 215

Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQDGHTVWSMGS 399
            L  WG  ++G+LG GD +    P  V  L D+  V  + G  H+  L+  G  V+  G 
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGE-VYGWGR 274

Query: 400 GNLGKLGHEDTGK 412
           G  G+LG  D  K
Sbjct: 275 GEHGRLGLGDNDK 287


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 190/435 (43%), Gaps = 36/435 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG  L   +  E   K S PRL       +++ I  G+    ++   G +  +G   
Sbjct: 232 VFLWGSVLGSMLGSEDIPK-SLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYS 290

Query: 248 LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLG 302
            G  +  +      PK V   A++   +V+  S+ H   +T  GE++ WG G H  G + 
Sbjct: 291 SGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK-HTCAITVSGELFEWGEGAHSLGLMN 349

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                +Q  P   +G +    V++++ G  H+A +T  G L+T+G+G  G LGHGD +  
Sbjct: 350 DWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGV 409

Query: 363 HTPTLVTEL--SDVGAVSCGESHTLVL-----SQDGHT----VWSMGSGNLGKLGHEDTG 411
             P  V  L  S V +V+CG  HT  +     S  G+     +++ G  + GKLGH D  
Sbjct: 410 ARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRK 469

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVT 467
               P  +++L  + + +V  GT+ +V LT  G+VF  G      L +      +   V 
Sbjct: 470 MKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVE 529

Query: 468 G-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           G L +  + ++S G SHV  L+   +V+ WG    GQ G  ++SN    P+ V  LE   
Sbjct: 530 GPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSN-RSSPTLVEALEGRD 588

Query: 527 VRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP 586
           V  +  G  F+ A  +  + S    +    C         ++  F  +   C+  G    
Sbjct: 589 VESVVCGFNFTAAICLHKTMSMKDQSVCSSC--------QMVFGFTRKEHNCYNCGSM-- 638

Query: 587 FCSKVTHAQFILLLL 601
           FCS  T  +  +  L
Sbjct: 639 FCSSCTSNKITMAAL 653


>gi|288923321|ref|ZP_06417455.1| regulator of chromosome condensation RCC1 [Frankia sp. EUN1f]
 gi|288345337|gb|EFC79732.1| regulator of chromosome condensation RCC1 [Frankia sp. EUN1f]
          Length = 418

 Score =  113 bits (283), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 98/328 (29%), Positives = 161/328 (49%), Gaps = 26/328 (7%)

Query: 220 NIRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVS--LSVSKC 276
           ++R +  G    F L+S G +  +G   +G L N TI  +   VP++ A +    +++  
Sbjct: 86  DVRAVAGGYTVGFALNSDGTVWAWGLNDVGQLGNGTI--INSNVPVQVAGLDGIRAIAAG 143

Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
           ++ +   +  +G V++WG    G+LG+G  ++     + + GL G R   ++A  S + A
Sbjct: 144 TDGNGYALRRDGTVWAWGANTTGQLGNGQPIANSTIPVQVVGLAGIRA--IAADGSTAYA 201

Query: 337 VTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
           +  DG ++ WG    G+LG+G  + +   P  +  LSD+ A++   +    L +DG TVW
Sbjct: 202 LRRDGTVWAWGSNTTGQLGNGQPIANSILPIQIPALSDIRAITARGASAFALRRDG-TVW 260

Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
           + GS   G+LG+       TP  +  L    +R++ AG   + AL  +G V+ WG     
Sbjct: 261 AWGSNTTGQLGNGTLVPSLTPVAVPNLTN--IRRIAAGVGVTYALDENGTVWAWGDNTLG 318

Query: 451 -LGLRSSSISFHTPVLVTGLSSH-QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
            LG  S + S   P+ VTG +     V ++ G S   AL      +AWGSN++GQ G  N
Sbjct: 319 QLGNGSLAPSL-IPLPVTGETGLVGAVSIAAGASGGYALRWDGTAFAWGSNSVGQLGNGN 377

Query: 509 FSNPVDQ---PSKVVGLEDVCVRQICAG 533
            +  V Q   P  + GL D  VR I  G
Sbjct: 378 PA--VAQSAVPLPIPGLGD--VRAISGG 401



 Score =  100 bits (249), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 21/287 (7%)

Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVL--TVTSEGEVYSWGVGEHGKLGH 303
           G LG   T+  P    VP+        V   +  + +   + S+G V++WG+ + G+LG+
Sbjct: 60  GQLGNGTTSPTPSYSAVPVTDLTGLDDVRAVAGGYTVGFALNSDGTVWAWGLNDVGQLGN 119

Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAG-HSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
           G  ++   P + + GL G R   ++AG   +  A+  DG ++ WG    G+LG+G   + 
Sbjct: 120 GTIINSNVP-VQVAGLDGIRA--IAAGTDGNGYALRRDGTVWAWGANTTGQLGNGQPIAN 176

Query: 363 HT-PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIE 420
            T P  V  L+ + A++   S    L +DG TVW+ GS   G+LG+ +       P  I 
Sbjct: 177 STIPVQVVGLAGIRAIAADGSTAYALRRDG-TVWAWGSNTTGQLGNGQPIANSILPIQIP 235

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
           AL    +R + A  + + AL  DG V+ WG      LG   + +   TPV V  L++ + 
Sbjct: 236 ALSD--IRAITARGASAFALRRDGTVWAWGSNTTGQLG-NGTLVPSLTPVAVPNLTNIRR 292

Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG 521
           +   +G ++  AL +   V+AWG NT+GQ G  + + P   P  V G
Sbjct: 293 IAAGVGVTY--ALDENGTVWAWGDNTLGQLGNGSLA-PSLIPLPVTG 336



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 22/254 (8%)

Query: 292 SWGVGEHGKLGHGNTLSQRR----PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           +WG+   G+LG+G T         P   + GL    V  V+ G++   A+  DG ++ WG
Sbjct: 53  AWGLNNVGQLGNGTTSPTPSYSAVPVTDLTGL--DDVRAVAGGYTVGFALNSDGTVWAWG 110

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCG-ESHTLVLSQDGHTVWSMGSGNLGKLG 406
             D G+LG+G + + + P  V  L  + A++ G + +   L +DG TVW+ G+   G+LG
Sbjct: 111 LNDVGQLGNGTIINSNVPVQVAGLDGIRAIAAGTDGNGYALRRDG-TVWAWGANTTGQLG 169

Query: 407 H-EDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
           + +     T P  +  L    +R + A  S + AL  DG V+ WG      LG      +
Sbjct: 170 NGQPIANSTIPVQVVGLAG--IRAIAADGSTAYALRRDGTVWAWGSNTTGQLGNGQPIAN 227

Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKV 519
              P+ +  LS   I  ++   +   AL +   V+AWGSNT GQ G      P   P  V
Sbjct: 228 SILPIQIPALSD--IRAITARGASAFALRRDGTVWAWGSNTTGQLGNGTLV-PSLTPVAV 284

Query: 520 VGLEDVCVRQICAG 533
             L +  +R+I AG
Sbjct: 285 PNLTN--IRRIAAG 296



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 78/270 (28%), Positives = 122/270 (45%), Gaps = 18/270 (6%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCT-FLLDSTGGLLVYG---K 245
           V+ WG N   Q+ +      + P   +    IR I AG     + L   G +  +G    
Sbjct: 106 VWAWGLNDVGQLGNGTIINSNVPVQVAGLDGIRAIAAGTDGNGYALRRDGTVWAWGANTT 165

Query: 246 GWLG----LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           G LG    +AN+TI   P +V   A I +++    S A+ L    +G V++WG    G+L
Sbjct: 166 GQLGNGQPIANSTI---PVQVVGLAGIRAIAADG-STAYALR--RDGTVWAWGSNTTGQL 219

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G+G  ++     + +  L   R   ++A  + + A+  DG ++ WG    G+LG+G L  
Sbjct: 220 GNGQPIANSILPIQIPALSDIRA--ITARGASAFALRRDGTVWAWGSNTTGQLGNGTLVP 277

Query: 362 RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIE 420
             TP  V  L+++  ++ G   T  L ++G TVW+ G   LG+LG+        P  V  
Sbjct: 278 SLTPVAVPNLTNIRRIAAGVGVTYALDENG-TVWAWGDNTLGQLGNGSLAPSLIPLPVTG 336

Query: 421 ALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
                    + AG S   AL WDG  F WG
Sbjct: 337 ETGLVGAVSIAAGASGGYALRWDGTAFAWG 366



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 86/205 (41%), Gaps = 25/205 (12%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQS-LP------SNIRHIEAGQFCTFLLDSTGGLLV 242
           V+ WG N   Q+ +       +P   S LP      S+IR I A     F L   G +  
Sbjct: 208 VWAWGSNTTGQLGN------GQPIANSILPIQIPALSDIRAITARGASAFALRRDGTVWA 261

Query: 243 YGKGWLG-LANTTIQP--LPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
           +G    G L N T+ P   P  VP    I  ++           +   G V++WG    G
Sbjct: 262 WGSNTTGQLGNGTLVPSLTPVAVPNLTNIRRIAAGV---GVTYALDENGTVWAWGDNTLG 318

Query: 300 KLGHGNTLSQRRPKLIMG--GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
           +LG+G+      P  + G  GL G     ++AG S   A+  DG  + WG    G+LG+G
Sbjct: 319 QLGNGSLAPSLIPLPVTGETGLVG--AVSIAAGASGGYALRWDGTAFAWGSNSVGQLGNG 376

Query: 358 D--LKSRHTPTLVTELSDVGAVSCG 380
           +  +     P  +  L DV A+S G
Sbjct: 377 NPAVAQSAVPLPIPGLGDVRAISGG 401


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  113 bits (283), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 7/191 (3%)

Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
           E  I+ ++   C + H L ++  GE+++WG   HG+LG G+  +      I+  L G  +
Sbjct: 255 EKXIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPL 311

Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
            Q+SAG +HS A++  G +Y+WG  D G+LG G    +  P+L+  L +  V  ++CG S
Sbjct: 312 VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGS 371

Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
           HT +L++DG  V++ G+G  G+LGH  T     P+++  L   RV ++  G   ++A   
Sbjct: 372 HTALLTKDG-LVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVS 430

Query: 443 D-GLVFWWGLG 452
           D G VF +G G
Sbjct: 431 DLGKVFSFGSG 441



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 137/273 (50%), Gaps = 29/273 (10%)

Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
           PK + L       SV + +E ++L ++S+G+ + +            ++   R + I   
Sbjct: 207 PKCIKLGKKAKIHSVDQGAE-YMLILSSDGKPFEYNY----------SIEHARFQCI--- 252

Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVGAV 377
           L  K + Q++ G  HS A+++ G L+ WG+  HG+LG G    S   P +V  LS +  V
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLV 312

Query: 378 --SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTS 435
             S G++H++ LS  G+ ++S G  + G+LG   T     P +IEAL   +V  +  G S
Sbjct: 313 QISAGKAHSMALSMSGN-IYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGS 371

Query: 436 FSVALTWDGLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQ 489
            +  LT DGLVF +G G       +S+ +   P LVT L+ +++  ++ G  H LA +S 
Sbjct: 372 HTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSD 431

Query: 490 YNEVYAWGSNTMGQCGQDNFSN-----PVDQPS 517
             +V+++GS   GQ G     N     P+  PS
Sbjct: 432 LGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPS 464



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 11/185 (5%)

Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGK 245
           +++ WG NLH Q+ +       + P++    S I    I AG+  +  L  +G +  +G+
Sbjct: 276 ELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGR 335

Query: 246 ---GWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
              G LGL +T  +  P  +  L+   V      C  +H   +T +G V+++G G+HG+L
Sbjct: 336 NDFGQLGLGHTDGKDFPSLIEALDNQKVEFLA--CGGSHTALLTKDGLVFTFGAGKHGQL 393

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLGHGDLK 360
           GH +T ++ RP+L+   L G RVTQ++ G  H+ A   D G ++++G G  G+LG+G   
Sbjct: 394 GHNSTQNELRPRLVT-ELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTH 452

Query: 361 SRHTP 365
           ++  P
Sbjct: 453 NQLIP 457



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 372 SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC 431
           + + +V  G  + L+LS DG                E    +   +    L++  + ++ 
Sbjct: 216 AKIHSVDQGAEYMLILSSDGKPF-------------EYNYSIEHARFQCILQEKXIIQIT 262

Query: 432 AGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVL 485
            G   S+AL+  G +F WG      LG+ S   S   P +V  LS   +V +S G +H +
Sbjct: 263 CGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAHSM 322

Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
           ALS    +Y+WG N  GQ G  + ++  D PS +  L++  V  + C GS
Sbjct: 323 ALSMSGNIYSWGRNDFGQLGLGH-TDGKDFPSLIEALDNQKVEFLACGGS 371



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 416 PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIV 475
           PK I+  +K ++  V  G  + + L+ DG  F +   +  +            L    I+
Sbjct: 207 PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYSIEHARFQ-------CILQEKXII 259

Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSL 535
            ++ GD H LALS+  E++AWG N  GQ G  +    +  P  V  L  + + QI AG  
Sbjct: 260 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKA 319

Query: 536 FSIAYTV 542
            S+A ++
Sbjct: 320 HSMALSM 326


>gi|390345351|ref|XP_003726313.1| PREDICTED: serine/threonine-protein kinase Nek8-like
           [Strongylocentrotus purpuratus]
          Length = 625

 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 135/302 (44%), Gaps = 18/302 (5%)

Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG-KLGHGNTLSQRRPKLI 315
           P P R+PL  A   +       +    VT  G +  W     G   G    + Q  P  I
Sbjct: 266 PSPLRLPLPHADTKVLQVSIGRSQKTGVTHNGRLIIWESPSIGTDSGLPGAVDQVVPLYI 325

Query: 316 MGGLYGKR---VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL- 371
              L G+    +  VS G    A +T+ G+L T+G G HG LGHG+ +      +V  L 
Sbjct: 326 PRYLEGQSAVSIQNVSCGDLFVACLTDRGILMTFGSGAHGCLGHGNYQDLSQAKIVEALL 385

Query: 372 -SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
             +V  VSCG SH + ++ + H V+S G G+ G+LG +    V++P+ +    + R R V
Sbjct: 386 GYEVALVSCGASHVMAVTNE-HEVFSWGRGDNGRLGLDSQESVSSPQAVVLPPQHRARSV 444

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH-----QIVDVSI 479
           C G   S+ +T +G+V   G      LGL            +T +++H      I   +I
Sbjct: 445 CCGVDCSMLITEEGVVIACGSNRCNKLGLDQGEQQIEEVFSLTQVATHPLPQLNITSAAI 504

Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G SH   ++   E Y  GSN  GQ G    +     P K    +DV + Q+  G +F++A
Sbjct: 505 GTSHSAFITDKGECYTLGSNQFGQLGCRTETTTPRIPCKPSFPDDVTLTQVACGDMFTVA 564

Query: 540 YT 541
            T
Sbjct: 565 IT 566



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 25/278 (8%)

Query: 249 GLANTTIQPLPKRVP--LEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
           GL     Q +P  +P  LE  + VS+    C +  V  +T  G + ++G G HG LGHGN
Sbjct: 312 GLPGAVDQVVPLYIPRYLEGQSAVSIQNVSCGDLFVACLTDRGILMTFGSGAHGCLGHGN 371

Query: 306 --TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
              LSQ +   I+  L G  V  VS G SH  AVT +  +++WG GD+GRLG    +S  
Sbjct: 372 YQDLSQAK---IVEALLGYEVALVSCGASHVMAVTNEHEVFSWGRGDNGRLGLDSQESVS 428

Query: 364 TPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE- 420
           +P  V         +V CG   +++++++G  V + GS    KLG  D G+    +V   
Sbjct: 429 SPQAVVLPPQHRARSVCCGVDCSMLITEEG-VVIACGSNRCNKLGL-DQGEQQIEEVFSL 486

Query: 421 ------ALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
                  L +  +     GTS S  +T  G  +  G      LG R+ + +   P   + 
Sbjct: 487 TQVATHPLPQLNITSAAIGTSHSAFITDKGECYTLGSNQFGQLGCRTETTTPRIPCKPSF 546

Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
                +  V+ GD   +A++  ++V++WG    G+ G+
Sbjct: 547 PDDVTLTQVACGDMFTVAITTDDKVFSWGKGARGRIGR 584


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 17/281 (6%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
           C   H + +  +GEVY+ G+   G+LGH       +P+ I G L  + +  V+ G SHS 
Sbjct: 41  CGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQI-GALADQHIIHVACGESHSL 97

Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
           A+++ G L++WG G  G+LG    + S   P L+ +L+   +  VSCG  H L L+ DG 
Sbjct: 98  ALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQ 157

Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
             ++ G  + G+LG  ++     +P+ + +L    + +V AG + S AL+  G VF WG 
Sbjct: 158 -FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 216

Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
                LGL S      +P  V  L + ++V +S G+ H   L++   V+ +G+ + GQ G
Sbjct: 217 NNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275

Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSN 546
            D+ ++ V+ P +V+ L    V QI  G   ++A+ VP S 
Sbjct: 276 HDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSSG 314



 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
           C E+H L ++  G+++SWG G  G+LG   T  S   P+LI   L  + + QVS G+ H 
Sbjct: 91  CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149

Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
            A+  DG  +TWG+  HG+LG G +  S+ +P  V  L  +    V+ G +H+  LS  G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209

Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
             V+  G  N G+LG  D     +P  ++ LR  +V  +  G   +  LT  G VF +G 
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 452 G----LRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
           G    L   S++    P  V  L   ++  ++ G  H LA       +YA+G    GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328

Query: 506 QDNFSNPVDQPSKVVG 521
             +  N V  PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343



 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 100/201 (49%), Gaps = 14/201 (6%)

Query: 315 IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD- 373
           + G +  + V +V+ G +HS  + EDG +YT G    G+LGH   +  + P  +  L+D 
Sbjct: 27  VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQ 84

Query: 374 -VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
            +  V+CGESH+L LS  G    W  GS G LG +  ED+  V  P++I+ L +  + +V
Sbjct: 85  HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDS--VAVPRLIQKLNQQTILQV 142

Query: 431 CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHV 484
             G    +AL  DG  F WG      LGL     S  +P  V  L    +  V+ G +H 
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202

Query: 485 LALSQYNEVYAWGSNTMGQCG 505
            ALS    V+ WG N  GQ G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLG 223



 Score = 87.0 bits (214), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)

Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
           P +   +SD  V  V+CG +H++ L +DG  V++ G    G+LGHE  G    P+ I AL
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81

Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
               +  V  G S S+AL+  G +F WG      LGL ++  S   P L+  L+   I+ 
Sbjct: 82  ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141

Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
           VS G+ H LAL+   + + WG N+ GQ G          P +V  LE + + Q+ AG   
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201

Query: 537 SIAYTV 542
           S A ++
Sbjct: 202 SFALSL 207



 Score = 75.1 bits (183), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 139/331 (41%), Gaps = 39/331 (11%)

Query: 68  GIESLTQVSTFLRQTVTSTSPKADKTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATH 127
           GI +  QV  F+       S ++ K V       V L +    Y   LN   ++      
Sbjct: 20  GIVAEPQVCGFI-------SDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREG 72

Query: 128 YQVDLIRSACLVYLILVTLADDNIKPLGDRK---SSNSNTDI--------DSTSTPKLTY 176
            + + I +    ++I V   + +   L DR    S  + +D         DS + P+L  
Sbjct: 73  NKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQ 132

Query: 177 NIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKCSRPRLQSLPS-NI 221
            +    I              A  + +TWG N H Q  +  E   + S  R++SL    +
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL 192

Query: 222 RHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSE 278
             + AG   +F L  +G +  +G    G LGL++   +  P  V L      + +S C E
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYIS-CGE 251

Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA-V 337
            H   +T  G V+++G G  G+LGH +   +  P+ ++  L G  VTQ++ G  H+ A V
Sbjct: 252 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFV 310

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
              GL+Y +G G  G+LG G   +   P+ V
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341



 Score = 43.5 bits (101), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)

Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN-IRHIEAGQFCTFLLDSTGGLLVYGK-- 245
           V+ WG N   Q+ L + + + S   ++ L +  + +I  G+  T +L  +GG+  +G   
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
            G LG  +   +  P+RV LE     ++   C   H L  V S G +Y++G G  G+LG 
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329

Query: 304 GNTLSQRRPKLIMG 317
           G+T + + P  + G
Sbjct: 330 GHTCNVKCPSPVKG 343


>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
          Length = 1865

 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 17/235 (7%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHG-NTLSQRRPKLI-MGGLYGKRVTQVSAGHSH 333
            C+    + +   G VY+WG   HG LG G + L    P+ I    L    V  VS GH H
Sbjct: 823  CAGFSHVALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAITFFWLMEVEVLSVSCGHCH 882

Query: 334  SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD---VGAVSCGESHTLVLSQD 390
            + AVT +G +Y WG    G+LG G +    TP L+T L+    + AV+ G+ H++ L+ D
Sbjct: 883  TLAVTNNG-VYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVA-GQYHSVALTAD 940

Query: 391  GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
            G  V++ G G  G+LGH +T K  TP ++ +L    +R + AG + ++AL+ +G+V+ +G
Sbjct: 941  GR-VFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFG 999

Query: 451  ------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
                  LG+  S++    P+ V+   S +I  ++ G  H LA+S  N++Y WG++
Sbjct: 1000 CNIFGQLGV-GSNVKSSVPMKVS--LSERITLITTGYFHNLAVSYTNKLYIWGAS 1051



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 10/189 (5%)

Query: 264  LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
            +E  ++S+S   C   H L VT+ G VY+WG  + G+LG G  L    P+LI   L  + 
Sbjct: 869  MEVEVLSVS---CGHCHTLAVTNNG-VYAWGSSQFGQLGLGKVLQCSTPELITS-LAQEV 923

Query: 324  VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGE 381
            +    AG  HS A+T DG ++TWG G HG+LGHG+   + TPTLVT L  + +  ++ G 
Sbjct: 924  IIDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGH 983

Query: 382  SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALT 441
            +HTL LS +G  V++ G    G+LG     K + P  +      R+  +  G   ++A++
Sbjct: 984  AHTLALSTEG-IVYAFGCNIFGQLGVGSNVKSSVPMKVSLSE--RITLITTGYFHNLAVS 1040

Query: 442  WDGLVFWWG 450
            +   ++ WG
Sbjct: 1041 YTNKLYIWG 1049



 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 13/187 (6%)

Query: 329  AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH-TPTLVTEL----SDVGAVSCGESH 383
            AG SH  A+  +G +YTWG   HG LG G    R+ +P  +T       +V +VSCG  H
Sbjct: 824  AGFSH-VALIRNGNVYTWGSSVHGCLGIGPSVLRYGSPQAITFFWLMEVEVLSVSCGHCH 882

Query: 384  TLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
            TL ++ +G  V++ GS   G+LG     + +TP++I +L +  +    AG   SVALT D
Sbjct: 883  TLAVTNNG--VYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVAGQYHSVALTAD 940

Query: 444  GLVFWWGLGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
            G VF WG G+       ++    TP LVT L    I  ++ G +H LALS    VYA+G 
Sbjct: 941  GRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAFGC 1000

Query: 499  NTMGQCG 505
            N  GQ G
Sbjct: 1001 NIFGQLG 1007



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 84/183 (45%), Gaps = 18/183 (9%)

Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEA--LRKFRVRKVCAGTSF 436
           G SH + L ++G+ V++ GS   G LG      +  +P+ I    L +  V  V  G   
Sbjct: 825 GFSH-VALIRNGN-VYTWGSSVHGCLGIGPSVLRYGSPQAITFFWLMEVEVLSVSCGHCH 882

Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
           ++A+T +G V+ WG      LGL    +   TP L+T L+   I+D   G  H +AL+  
Sbjct: 883 TLAVTNNG-VYAWGSSQFGQLGL-GKVLQCSTPELITSLAQEVIIDAVAGQYHSVALTAD 940

Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
             V+ WG    GQ G  N    +  P+ V  L    +R I AG     A+T+  S   + 
Sbjct: 941 GRVFTWGWGVHGQLGHGNTDKKM-TPTLVTSLLGTVIRYITAGH----AHTLALSTEGIV 995

Query: 551 SAF 553
            AF
Sbjct: 996 YAF 998



 Score = 46.2 bits (108), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 28/205 (13%)

Query: 190  VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG----- 244
            VY +GCN+  Q+      K S P   SL   I  I  G F    +  T  L ++G     
Sbjct: 995  VYAFGCNIFGQLGVGSNVKSSVPMKVSLSERITLITTGYFHNLAVSYTNKLYIWGASPQV 1054

Query: 245  --------KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
                    K    L    ++        E    S +++  +E  +        V S   G
Sbjct: 1055 LRLQAQTQKRTRILEQRDLKQFENIDEFEKVTDSANMNDTNEEVLENNAQNRNVQSKACG 1114

Query: 297  ----EHGKLGHG-----------NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
                   KL +               +  +P ++   L    + ++SAG  H+A +T+DG
Sbjct: 1115 ISTESRKKLDNSCLKSVNVGSLEEAQTHLKPTIVDTSLVKGDIIRISAGCHHNALITKDG 1174

Query: 342  LLYTWGEGDHGRLGHGDLKSRHTPT 366
             LY WG    G++G+G  +    PT
Sbjct: 1175 SLYMWGRNLDGQIGNGSRREVPIPT 1199



 Score = 44.7 bits (104), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 35/274 (12%)

Query: 186  AHSKVYTWGCNLHHQILDEVRGKCSRPRLQS--LPSNIRHIEAGQFCTFLLDSTGGLLVY 243
            A  +V+TWG  +H Q+      K   P L +  L + IR+I AG   T  L + G +  +
Sbjct: 939  ADGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLALSTEGIVYAF 998

Query: 244  G---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
            G    G LG+ +     +P +V L   I  ++       H L V+   ++Y WG      
Sbjct: 999  GCNIFGQLGVGSNVKSSVPMKVSLSERITLITTGY---FHNLAVSYTNKLYIWGASPQVL 1055

Query: 301  LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
                 T  Q+R +++      +R  +          VT+   +    E     +   + +
Sbjct: 1056 RLQAQT--QKRTRIL-----EQRDLKQFENIDEFEKVTDSANMNDTNE----EVLENNAQ 1104

Query: 361  SRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIE 420
            +R          +V + +CG S       D   + S+  G+L     E+      P +++
Sbjct: 1105 NR----------NVQSKACGISTESRKKLDNSCLKSVNVGSL-----EEAQTHLKPTIVD 1149

Query: 421  -ALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL 453
             +L K  + ++ AG   +  +T DG ++ WG  L
Sbjct: 1150 TSLVKGDIIRISAGCHHNALITKDGSLYMWGRNL 1183


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 190/435 (43%), Gaps = 36/435 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG  L   +  E   K S PRL       +++ I  G+    ++   G +  +G   
Sbjct: 233 VFLWGSVLGSMLGSEDIPK-SLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYS 291

Query: 248 LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLG 302
            G  +  +      PK V   A++   +V+  S+ H   +T  GE++ WG G H  G + 
Sbjct: 292 SGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK-HTCAITVSGELFEWGEGAHSLGLMN 350

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                +Q  P   +G +    V++++ G  H+A +T  G L+T+G+G  G LGHGD +  
Sbjct: 351 DWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGV 410

Query: 363 HTPTLVTEL--SDVGAVSCGESHTLVL-----SQDGHT----VWSMGSGNLGKLGHEDTG 411
             P  V  L  S V +V+CG  HT  +     S  G+     +++ G  + GKLGH D  
Sbjct: 411 ARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRK 470

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVT 467
               P  +++L  + + +V  GT+ +V LT  G+VF  G      L +      +   V 
Sbjct: 471 MKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVE 530

Query: 468 G-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           G L +  + ++S G SHV  L+   +V+ WG    GQ G  ++SN    P+ V  LE   
Sbjct: 531 GPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSN-RSSPTLVEALEGRD 589

Query: 527 VRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP 586
           V  +  G  F+ A  +  + S    +    C         ++  F  +   C+  G    
Sbjct: 590 VESVVCGFNFTAAICLHKTMSMKDQSVCSSC--------QMVFGFTRKKHNCYNCGSM-- 639

Query: 587 FCSKVTHAQFILLLL 601
           FCS  T  +  +  L
Sbjct: 640 FCSSCTSNKITMAAL 654


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 145/328 (44%), Gaps = 77/328 (23%)

Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
             +V++WG  L  ++   V    S P+    L + N+  +  G++ +  +  +G L ++G
Sbjct: 323 QGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWG 382

Query: 245 K-----GWLGLANTTIQPLPKRV--PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
                 G LG  +   Q +P+++  PLE   VS SVS C   H   VTS G+++++G G 
Sbjct: 383 GNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVS-SVS-CGPWHTAVVTSAGQLFTFGDGT 440

Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE------------DGLLYT 345
            G LGHG+ +S   P+ +   L G R  + + G  H+AAV E             G L+T
Sbjct: 441 FGVLGHGDRISVSIPREVES-LKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFT 499

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT---------- 393
           WG+GD  RLGHGD ++R  PT V  L   +   V+CG S T  L+  G            
Sbjct: 500 WGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSPVYGQ 559

Query: 394 -----------------------------------------VWSMGSGNLGKLGHEDTGK 412
                                                    V++ G G  G+LGH D   
Sbjct: 560 LGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDADD 619

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
             +P V+EAL+  +V+ +  GTSF+ A+
Sbjct: 620 RNSPSVVEALKDKQVKGIVCGTSFTAAI 647



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 21/284 (7%)

Query: 276 CSEAHVLTVTSEGEVYSWGVGEH--GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
           C E H   VT  G++Y WG   +  G LG G+  +Q  P+ + G L G  V+ VS G  H
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVSCGPWH 423

Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAV--SCGESHTLVLSQ-- 389
           +A VT  G L+T+G+G  G LGHGD  S   P  V  L  +  +  +CG  HT  + +  
Sbjct: 424 TAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVVEIM 483

Query: 390 ---------DGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
                        +++ G G+  +LGH D      P  +  L +    +V  G S + AL
Sbjct: 484 VGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAAL 543

Query: 441 TWDGLVFWWGL----GLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYA 495
           T  G V+  G      L +       P  V G L  + + +++ G  HV  L+   EVY 
Sbjct: 544 TTTGQVYTMGSPVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYT 603

Query: 496 WGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           WG    G+ G  + ++  + PS V  L+D  V+ I  G+ F+ A
Sbjct: 604 WGKGANGRLGHGD-ADDRNSPSVVEALKDKQVKGIVCGTSFTAA 646



 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 117/265 (44%), Gaps = 25/265 (9%)

Query: 264 LEAAIV-SLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGK 322
           LE+A++  +    C   H   VT +GEV+SWG    G+LGHG       PK +  GL   
Sbjct: 299 LESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFV-DGLKNF 357

Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEG--DHGRLGHGDLKSRHTPTLVT---ELSDVGAV 377
            V  V+ G  HS AVT  G LY WG    + G LG G   ++  P  +    E   V +V
Sbjct: 358 NVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSV 417

Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
           SCG  HT V++  G  +++ G G  G LGH D   V+ P+ +E+L+  R  +   G   +
Sbjct: 418 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHT 476

Query: 438 VALT------------WDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQIVDVSIG 480
            A+               G +F WG G +         +   P  V  L       V+ G
Sbjct: 477 AAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACG 536

Query: 481 DSHVLALSQYNEVYAWGSNTMGQCG 505
            S   AL+   +VY  GS   GQ G
Sbjct: 537 HSLTAALTTTGQVYTMGSPVYGQLG 561


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 140/325 (43%), Gaps = 76/325 (23%)

Query: 293 WGVGEHGKLGHGNT-----LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
           WG    G+LG G       L  RR +       GKRV  V  G  H+  + EDG +YT G
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEF----FEGKRVRDVGCGRRHTVFLLEDGTVYTCG 59

Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
             D G+LGH   K+R  P  V  L   ++ AVSCGE+HTL L+  G    W +GS G LG
Sbjct: 60  CNDLGQLGHE--KARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLG 117

Query: 404 -----------------------------------------------KLGHEDTGK---- 412
                                                          K G    G+    
Sbjct: 118 LSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGAC 177

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLV 466
           V +P+VI++L+     ++ AG + S  LT  G +F WG      LGL  +      PVL+
Sbjct: 178 VCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDND-DRRFPVLL 236

Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
             L S Q+V +  G+ H  AL++   V+ +G+   GQ G ++ ++ V+ P KV  L    
Sbjct: 237 KTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVN-PRKVFELMGSV 295

Query: 527 VRQICAGSLFSIAYTVPPSNSALSS 551
           V QI  G   ++A+   PS+  + S
Sbjct: 296 VSQIACGRQHTLAFI--PSSGKIDS 318



 Score =  106 bits (264), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 42/387 (10%)

Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRV-PLEAA-IVSLSVSKCS 277
           +R +  G+  T  L   G +   G   LG L +   +  P++V  L+A  IV++S   C 
Sbjct: 36  VRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPEQVVSLDAQNIVAVS---CG 92

Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
           EAH L +  +G+V++WG+G  G+LG        R    +  L    +TQV+ G+ HS A+
Sbjct: 93  EAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLAL 152

Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDV--GAVSCGESHTLVLSQDGHTV 394
              G +++WG+  +G+LG G   +   +P ++  L  +  G +S G +H+  L+  G  +
Sbjct: 153 ARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSG-AI 211

Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-- 452
           +  G    G+LG  D      P +++ LR  +V  +C G   + ALT +G VF +G G  
Sbjct: 212 FGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGY 271

Query: 453 --LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQCGQDN 508
             L  +S +    P  V  L    +  ++ G  H LA +    ++ ++G    GQ G  +
Sbjct: 272 GQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRS 331

Query: 509 FSNPVDQPSKVVGL-----------------EDVCVRQICAGSLFSIAYTVPPSNSALSS 551
             N +  P+ V G                     CV++I AG   S A+     +     
Sbjct: 332 TCNRIS-PTPVKGCWRAHADPCVELCISEAERSYCVKRIYAGGDQSFAHYALSEDDG--- 387

Query: 552 AFTPLCVDV-RP--HTFTLIREFLEQY 575
              PL V + RP    +TL  E ++++
Sbjct: 388 --PPLDVRITRPAGQIYTLSTELIQKW 412



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 26/277 (9%)

Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
            +V+ WG     Q+   +   C R PR ++SL   +I  +  G + +  L   G +  +G
Sbjct: 103 GQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWG 162

Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
           +   G LGL          +V      +         AH   +T  G ++ WG  + G+L
Sbjct: 163 QNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQL 222

Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
           G G+   +R P +++  L  ++V  +  G  H+AA+T++G ++T+G G +G+LGH     
Sbjct: 223 GLGDNDDRRFP-VLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281

Query: 362 RHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
              P  V EL  S V  ++CG  HTL        + S G G  G+LG   T    +P  +
Sbjct: 282 EVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPV 341

Query: 420 -----------------EALRKFRVRKVCAGTSFSVA 439
                            EA R + V+++ AG   S A
Sbjct: 342 KGCWRAHADPCVELCISEAERSYCVKRIYAGGDQSFA 378


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 177/418 (42%), Gaps = 28/418 (6%)

Query: 146 LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHS--KVYTWGCNLHHQILD 203
           +++  I  L D    N   +   T TPKL    G        S   V+ WG +    ILD
Sbjct: 185 MSNPEIHGLQDIMVGNREKEEKITQTPKLKTFEGPRAACRLDSLKDVFFWG-DAFGSILD 243

Query: 204 EVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQPLPKR 261
                 S P L    +  +++ I  G+    ++   G +  +G    G     +     R
Sbjct: 244 YDDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSR 303

Query: 262 VPLEAAIVSLSVSKCS--EAHVLTVTSEGEVYSWGVGEH-GKLG-HGNTLSQRRPKLIMG 317
             L  ++ SL V   +    H   VT  GE++ WG G H G+L  + N L    P  +  
Sbjct: 304 PKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNL--WFPHKLFS 361

Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
            L G  V +++ G  H+A +T  G LYT+G+G  G LGHGD +    P  V  L  S V 
Sbjct: 362 PLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVK 421

Query: 376 AVSCGESHTLVL---------SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
            V+CG  HT  +         +     +++ G  + GKLGH D      P  +++L  + 
Sbjct: 422 CVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYD 481

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFH----TPVLVTGLSSHQIVD-VSIGD 481
             +V  G + +V L+  G+VF  G  +     + H    T   V GL   + V  +S G 
Sbjct: 482 FIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGS 541

Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           SHV  L+   +V+ WG    GQ G  ++ N    P+ V  LE   V  I  G  ++ A
Sbjct: 542 SHVAVLTTNGKVFTWGKGKEGQLGLGDYLNR-STPTLVDALEGRQVESISCGYNYTAA 598



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 143/328 (43%), Gaps = 73/328 (22%)

Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPS-NIRHIEAGQFCTFLLDSTGGL 240
           I     +VY+WG      I ++V  K SRP+L +S+ S +++ +  G      +  +G L
Sbjct: 275 IITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGEL 334

Query: 241 LVYGKG-WLG----LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
             +G+G  +G     AN    P     PL+   +S+    C   H   +TS G++Y++G 
Sbjct: 335 FEWGEGPHMGQLDCYANNLWFPHKLFSPLDG--ISVVKIACGPWHTAIITSSGQLYTYGD 392

Query: 296 GEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE----------DGLLYT 345
           G  G LGHG+T    RPK +   L G RV  V+ G  H+AA+ E             L+T
Sbjct: 393 GTFGVLGHGDTQGTTRPKEVEY-LKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFT 451

Query: 346 WGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLS--------------- 388
           WG+ D G+LGH D K +  PT V  L+D     VSCG + T+VLS               
Sbjct: 452 WGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQ 511

Query: 389 -----QDGHTV-------------------------------WSMGSGNLGKLGHEDTGK 412
                 DG TV                               ++ G G  G+LG  D   
Sbjct: 512 LGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLN 571

Query: 413 VTTPKVIEALRKFRVRKVCAGTSFSVAL 440
            +TP +++AL   +V  +  G +++ A+
Sbjct: 572 RSTPTLVDALEGRQVESISCGYNYTAAV 599


>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
            [Oxytricha trifallax]
          Length = 2049

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 136/313 (43%), Gaps = 67/313 (21%)

Query: 276  CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            C  +H + +   G+V+ WG  + G+LG G+      P+++            SAG+ HS 
Sbjct: 1640 CGNSHTMVINMSGQVFVWGANQTGQLGLGDN----SPQIL------------SAGYEHSI 1683

Query: 336  AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHT 393
            A+T+   LY WG G  G  G G LK ++ P  +     S +    CG  HT+ +++D   
Sbjct: 1684 AITKSNELYIWGSG--GLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEA 1741

Query: 394  V-WSMGSG-NLG-------KL--GHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
              W +  G  LG       KL  G  D  +V TP+ I  L   ++ +V  G + S+A+T 
Sbjct: 1742 YSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMTK 1801

Query: 443  DGLVFWWG------LGLRSSSISF-----------HTPVLVTGLSSHQIVDVSIGDSHVL 485
            DG ++ WG      LGL  S  SF           + P  + GL   +I  +  G +  L
Sbjct: 1802 DGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTL 1861

Query: 486  ALSQYNEVYAWGSNTMGQCGQDNF-------------------SNPVDQPSKVVGLEDVC 526
              +   ++Y  G N +GQ G D F                   ++ V  P++V+  + + 
Sbjct: 1862 FQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIA 1921

Query: 527  VRQICAGSLFSIA 539
            + QI  G   S+A
Sbjct: 1922 IHQIACGESHSLA 1934



 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 146/359 (40%), Gaps = 82/359 (22%)

Query: 189  KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHI-EAGQFCTFLLDSTGGLLVYGKGW 247
            +V+ WG N   Q+               L  N   I  AG   +  +  +  L ++G G 
Sbjct: 1653 QVFVWGANQTGQL--------------GLGDNSPQILSAGYEHSIAITKSNELYIWGSGG 1698

Query: 248  L-GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG---- 302
            L G+     Q  P ++        L+   C   H + VT + E YSWG+ E G+LG    
Sbjct: 1699 LCGIGTLKQQNAPVKIDFFNKSKILTAV-CGGLHTVAVTKDWEAYSWGLTEGGQLGLPQS 1757

Query: 303  --------HGNT----LSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
                     G+       QR PKL      G ++ QV+ G +HS A+T+DG +Y WG+ +
Sbjct: 1758 TIVKLCQGQGDEPQVLTPQRIPKL-----EGLQIAQVACGEAHSIAMTKDGTIYGWGQSN 1812

Query: 351  HGRLGHGDLKSRHTPTLVTELSDV--------------GAVSCGESHTLVLSQDGHTVWS 396
            +G+LG G       P L  E S V                + CG + TL  +  G  ++ 
Sbjct: 1813 YGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKG-DLYG 1871

Query: 397  MGSGNLGKLG--------------------HEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
             G  +LG+LG                    H  T  V  P  +   +   + ++  G S 
Sbjct: 1872 CGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQIACGESH 1931

Query: 437  SVALTWDGL-VFW-WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
            S+A++ DG+ + W WG      LGL   ++  + P  V  L S QI  ++ G  H +AL
Sbjct: 1932 SLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLN-PRPVQSLCSSQIQRIACGSMHSVAL 1989



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 60/293 (20%)

Query: 246  GWLGLANTTIQPL------------PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
            G LGL  +TI  L            P+R+P    +    V+ C EAH + +T +G +Y W
Sbjct: 1750 GQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVA-CGEAHSIAMTKDGTIYGW 1808

Query: 294  GVGEHGKLGHGNTLSQRRPKLIM-----------GGLYGKRVTQVSAGHSHSAAVTEDGL 342
            G   +G+LG G +     P L M            GL  ++++++  G + +   T+ G 
Sbjct: 1809 GQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQTDKGD 1868

Query: 343  LYTWGEGDHGRLGHGDL-------------KSRHT-------PTLVTELSDVG--AVSCG 380
            LY  G  D G+LG                 K +H        PT V     +    ++CG
Sbjct: 1869 LYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRVICFQGIAIHQIACG 1928

Query: 381  ESHTLVLSQDG-HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
            ESH+L +S DG + +W+ G    G+LG  +      P+ +++L   +++++  G+  SVA
Sbjct: 1929 ESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVA 1988

Query: 440  LTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
            L  D           ++ IS ++    +  S+ QI +  + D   LA +  NE
Sbjct: 1989 LIGD-----------TNQISIYSTQFYS--SNEQIKNYYVQDIRGLANNWQNE 2028



 Score = 84.7 bits (208), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 59/295 (20%)

Query: 288  GEVYSWGVGEHGKLG------------HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
            G ++S G   +G+LG            H  ++    P++I+  L  + + +V  G+SH+ 
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIIS-LKDEVIREVCCGNSHTM 1646

Query: 336  AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGH-TV 394
             +   G ++ WG    G+LG GD    ++P ++         S G  H++ +++     +
Sbjct: 1647 VINMSGQVFVWGANQTGQLGLGD----NSPQIL---------SAGYEHSIAITKSNELYI 1693

Query: 395  WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL--- 451
            W  GSG L  +G     +   P  I+   K ++     G   +VA+T D   + WGL   
Sbjct: 1694 W--GSGGLCGIG--TLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSWGLTEG 1749

Query: 452  ---GLRSSSI-----------SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWG 497
               GL  S+I              TP  +  L   QI  V+ G++H +A+++   +Y WG
Sbjct: 1750 GQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIAMTKDGTIYGWG 1809

Query: 498  SNTMGQCG----QDNF-------SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
             +  GQ G     D+F        + V +P ++ GL+   + +I  G+ F++  T
Sbjct: 1810 QSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLFQT 1864


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 155/335 (46%), Gaps = 41/335 (12%)

Query: 235 DSTGGLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
           D+ G + ++G+    + +  ++PL   V L+   ++     C   H   VT +GE+++WG
Sbjct: 234 DALGDVYIWGEV---ICDNLVKPLESNVVLDVHHIA-----CGVRHAALVTRQGEIFTWG 285

Query: 295 VGEHGKLGHGNTLSQRRPKLIMG-----------GLYGKRVTQVSAGHSHSAAVTEDGLL 343
               G+LGHG      +P+L+              L G +V  V+ G  H+A VT    L
Sbjct: 286 EESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQL 345

Query: 344 YTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHT-----LVLSQDGHTV-- 394
           +T+G+G  G LGHGD  +   P  V  LS +   AV+CG  HT     ++++Q   +V  
Sbjct: 346 FTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSS 405

Query: 395 ---WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
              ++ G G+  +LGH D      P  + AL ++  +KV  G S +V LT  G V   G 
Sbjct: 406 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGS 465

Query: 451 -----LGLRSSSISFHTPVLVTG-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
                LG   S      P  V   L    + +++ G  HV  L+  NEVY WG    G+ 
Sbjct: 466 TVYGQLGNPQSDGKL--PCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 523

Query: 505 GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
           G  +  +    P+ V  L+D  V+ I  GS ++ A
Sbjct: 524 GHGDIED-RKTPTLVETLKDRHVKYIACGSNYTAA 557



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 151/350 (43%), Gaps = 50/350 (14%)

Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK 245
           A   VY WG      I D +     +P   ++  ++ HI  G     L+   G +  +G+
Sbjct: 235 ALGDVYIWG----EVICDNL----VKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGE 286

Query: 246 ---GWLG--LANTTIQPLPKR-----------VPLEAAIVSLSVSKCSEAHVLTVTSEGE 289
              G LG  +    IQP                PLE   V+ SV+ C   H   VT+  +
Sbjct: 287 ESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVA-SVT-CGPWHTALVTTTRQ 344

Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE---------- 339
           ++++G G  G LGHG+  +   P+ +   L G R   V+ G  H+AAV E          
Sbjct: 345 LFTFGDGTFGVLGHGDKDNVAYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASV 403

Query: 340 -DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWS 396
             G L+TWG+GD  RLGHGD + R  PT V  L +     V+CG S T+ L+  G  V +
Sbjct: 404 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQ-VCT 462

Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---- 452
           MGS   G+LG+  +       V + L    V ++  G      LT    V+ WG G    
Sbjct: 463 MGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGR 522

Query: 453 LRSSSI-SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTM 501
           L    I    TP LV  L    +  ++ G ++  A+     ++ W S T+
Sbjct: 523 LGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAIC----LHKWVSGTV 568


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 190/435 (43%), Gaps = 36/435 (8%)

Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
           V+ WG  L   +  E   K S PRL       +++ I  G+    ++   G +  +G   
Sbjct: 232 VFLWGSVLGSMLGSEDIPK-SLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYS 290

Query: 248 LGLANTTIQ---PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH--GKLG 302
            G  +  +      PK V   A++   +V+  S+ H   +T  GE++ WG G H  G + 
Sbjct: 291 SGRLDQKVNVNASCPKMVESLASVHVKAVAFGSK-HTCAITVSGELFEWGEGAHSLGLMN 349

Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
                +Q  P   +G +    V++++ G  H+A +T  G L+T+G+G  G LGHGD +  
Sbjct: 350 DWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGV 409

Query: 363 HTPTLVTEL--SDVGAVSCGESHTLVL-----SQDGHT----VWSMGSGNLGKLGHEDTG 411
             P  V  L  S V +V+CG  HT  +     S  G+     +++ G  + GKLGH D  
Sbjct: 410 ARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRK 469

Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHTPVLVT 467
               P  +++L  + + +V  GT+ +V LT  G+VF  G      L +      +   V 
Sbjct: 470 MKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGESICSVE 529

Query: 468 G-LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
           G L +  + ++S G SHV  L+   +V+ WG    GQ G  ++SN    P+ V  LE   
Sbjct: 530 GPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSN-RSSPTLVEALEGRD 588

Query: 527 VRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYIP 586
           V  +  G  F+ A  +  + S    +    C         ++  F  +   C+  G    
Sbjct: 589 VESVVCGFNFTAAICLHKTMSMKDQSVCSSC--------QMVFGFTRKEHNCYNCGSM-- 638

Query: 587 FCSKVTHAQFILLLL 601
           FCS  T  +  +  L
Sbjct: 639 FCSSCTSNKITMAAL 653


>gi|422294826|gb|EKU22126.1| hect domain and rld 4, partial [Nannochloropsis gaditana CCMP526]
          Length = 516

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 130/288 (45%), Gaps = 18/288 (6%)

Query: 249 GLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLS 308
           G  N    P P RV L   +  L VS C   H L +   G V SWGVG  G+LG G+ LS
Sbjct: 151 GTVNGRAYPEPSRVSLGVPLRCLQVS-CGRKHALALMEGGFVTSWGVGYFGQLGQGDNLS 209

Query: 309 QRRPKLIM----GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
             RP+LI       L G RV  V+ G  HSA  T    ++ +G   +G++G G   ++ +
Sbjct: 210 SDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKIS 269

Query: 365 PTLVTELSDVGA-----VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTT-PKV 418
                 +S +G+     + CG  HT VL+  G  V+S G+ + G+LG  D  K+   P  
Sbjct: 270 TPRPVNMSGIGSSQIRQLVCGRHHTSVLTDKGQ-VFSWGASSFGRLGLPDPKKIVGLPTE 328

Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR-----SSSISFHTPVLVTGLSSHQ 473
           + A R   +  +  G    + L  DG  + WG G        +++   TP  V GL   +
Sbjct: 329 VPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSR 388

Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN-PVDQPSKVV 520
           I  ++ G    + +++   +Y WG    G  G +  S  P  +P   V
Sbjct: 389 IAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPV 436



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 427 VRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
           V+ +  G +F++ALT  G+ + WG     +  ++  P  V+     + + VS G  H LA
Sbjct: 128 VQDIACGATFTIALTSRGVPYQWGT---VNGRAYPEPSRVSLGVPLRCLQVSCGRKHALA 184

Query: 487 LSQYNEVYAWGSNTMGQCGQ-DNFSNPVDQP 516
           L +   V +WG    GQ GQ DN S+  D+P
Sbjct: 185 LMEGGFVTSWGVGYFGQLGQGDNLSS--DRP 213


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 17/262 (6%)

Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
           A+I    V   S    L VT   EV+ +G+     LG G++ S   PK +   L GK++ 
Sbjct: 19  ASIRKACVFGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEA-LCGKKIK 77

Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
            +S G   H    TEDG++Y WG   + +LG+G       P  V     +  V  V+CG 
Sbjct: 78  SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS 137

Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
            H++ L+ DG  V++ G  N G++G   T    TP KV   L   +V  +  G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAV 196

Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
             +G V+ WG      LGL ++     TPV V  L S  +  +  G +H LAL+    +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255

Query: 495 AWGSNTMGQCG---QDNFSNPV 513
           AWG+NT GQ G   ++N  NPV
Sbjct: 256 AWGANTYGQLGTGNKNNLLNPV 277



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 17/272 (6%)

Query: 240 LLVYGKGW---LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
           + V+G  +   LG  ++    +PK++         S+S  S  HVL  T +G VY+WG  
Sbjct: 43  VFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHN 102

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH 356
            + +LG+G T     P  +   L  K+V +V+ G  HS A+  DG ++ WG  + G++G 
Sbjct: 103 GYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162

Query: 357 GDLKSRHTPTLVTE---LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
           G   ++ TP  VT    +  V  ++CG++ ++ +  +G  V+  G    G+LG  + G  
Sbjct: 163 GSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQ 221

Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVT 467
            TP  + AL    V ++  G + ++ALT +GL++ WG      LG  + + +   PV + 
Sbjct: 222 LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKN-NLLNPVHIM 280

Query: 468 GLSSHQIVDVSIGDS-HV-LALSQYNEVYAWG 497
            +   ++V+++   S H   A +Q   VY WG
Sbjct: 281 -VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)

Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
            A  +V+ WG N   Q+          PR  +   +I+    I  GQ  +  +   G   
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVY 203

Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
           G    G G LGL N   Q  P RV   AA+ S+ V++  C  AH L +T EG +Y+WG  
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260

Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
            +G+LG GN  +   P  IM  +  +RV +++A HS   SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLNPVHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.134    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,107,087,211
Number of Sequences: 23463169
Number of extensions: 1249874440
Number of successful extensions: 3115735
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3896
Number of HSP's successfully gapped in prelim test: 3038
Number of HSP's that attempted gapping in prelim test: 3012350
Number of HSP's gapped (non-prelim): 34694
length of query: 1858
length of database: 8,064,228,071
effective HSP length: 158
effective length of query: 1700
effective length of database: 8,652,014,665
effective search space: 14708424930500
effective search space used: 14708424930500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 85 (37.4 bits)