BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15269
(1858 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust.
Identities = 381/1010 (37%), Positives = 548/1010 (54%), Gaps = 127/1010 (12%)
Query: 37 TLGNQVLTTSLSIVRNLPPLSLSNETQLSSLGIESLTQVSTFLRQTVTSTSPKADKTVQS 96
+L N V+ T++ +V +LPPLSL+NE+++ +G++ L+QV+TFL+ VT + AD T+
Sbjct: 187 SLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLK-GVTIPNSGAD-TLGR 244
Query: 97 SLRSRVPLTKSLPPYNAALNLLEEVLRPAT---------------HYQVDLIRSACLVYL 141
L S + L L +L L E + A Q +I C + +
Sbjct: 245 RLASELLL--GLAAQRGSLRYLLEWIEMALGASAVVHTMEKGKLLSSQEGMISFDCFMTI 302
Query: 142 ILV-----------------TLADDNIKPLGD------RKSSNSNTDIDSTSTPKLTYNI 178
++ T D + L + + +D T +
Sbjct: 303 LMQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQT 362
Query: 179 GDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTG 238
GD I +VY WG N HQ+++ + K +P+L S+ + IEAGQ+CTF++ + G
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVPLEA--AIVSLSVSKCSEAHVLTVTSEGEVYSW 293
+ GKG LGL ++ Q K++ E +I +S SK S+ H L T+EGEV+SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 294 GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
G G++GKLGHGN+ +Q+ PKLI G L GK V VSAG+ HSAAVTEDG LYTWGEGD GR
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542
Query: 354 LGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
LGHGD SR+ PTLV ++S+VG VSCG SHT+ LS+DG TVWS G G+ GKLGH DT +V
Sbjct: 543 LGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHTPVLVTGL 469
PKVIEAL+ +RKVCAG+ S+ALT G V+ WG LG SS + P L+ L
Sbjct: 603 YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEEL 662
Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
++ +IVDVSIGDSH LALS NEVYAWG+N+MGQCGQ N + P+ +P KV GL+ + ++Q
Sbjct: 663 AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQ 722
Query: 530 ICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQYSACFETGDYI---P 586
I AG+ S+A+T P + + + P CVD+ TF+ +R FLE+Y C + I P
Sbjct: 723 ISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLERY--CDKINSEIPPLP 780
Query: 587 FCSKVTHAQFILLLLRLLSSHLYLALIGARSSSVLGNETAALRHVLFKLVDMETSPEIET 646
F S H F+ L L+LLS+HL LAL G ++S+LG + LR++LF+L+D EI+
Sbjct: 781 FPSSREHHSFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSTVPDEIQE 840
Query: 647 LLTDCLAIGASLLLPPVVEQLDLLKTLLSQD----HPLSNGQRMLLGVITSSLHKNEELA 702
++ + L++GA++LLPP+ E+++LL +LL Q LS GQRM L +I +SL + +A
Sbjct: 841 VVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVA 900
Query: 703 HIFYFDQNQDTNIL-------------------------MLEDLLKISCRKSYAYTLTHF 737
+ + D L + E L+K R YT F
Sbjct: 901 SLLGYSSPSDAADLSSVCTGYGNLSDQPYGTQSCHPDTHLAEILMKTLLRNLGFYTDQAF 960
Query: 738 ---QSNACKV------SPQETPV---SQVVTLLQSLIITQYVVKHSEICEEV--YQHYLD 783
+ N+ K S P + +L + L+ ++ SE V +L
Sbjct: 961 GELEKNSDKFLLGTSSSENSQPAHLHELLCSLQKQLLAFCHINNISENSSSVALLHKHLQ 1020
Query: 784 IVFPHVIDILERSIAWVNQ----GKDIEVLNELLYNSLAGKILFSIVHSLL---INIHRS 836
++ PH DI RS + + G E L +++Y S AG +L IV+SLL +++ R
Sbjct: 1021 LLLPHATDIYSRSANLLKESPWNGSVGEKLRDVIYVSAAGSMLCQIVNSLLLLPVSVARP 1080
Query: 837 MYPTLRYFLA-------ILPLLDSL-NQLL--PMQGN-----------YTETNSFLWLID 875
+ L L +LP D L +Q L P+ G S++WL+D
Sbjct: 1081 LLSYLLDLLPPLDCLNRLLPAADLLEDQELQWPLHGGPELIDPAGLPLPQPAQSWVWLVD 1140
Query: 876 MERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPSTAIID 925
+ER +ALLIG+ LG ML G P + EE +T +W+KT L S G+E T +D
Sbjct: 1141 LERTIALLIGRCLGGMLQGSPVSPEEQDTAYWMKTPLFSDGVEMDTPQLD 1190
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 315/565 (55%), Gaps = 81/565 (14%)
Query: 1215 NTLLREVSSNMIHILAIACANHIEDLNESVRSKLTSCLHVYLETLLPPS----------- 1263
+T L+ S+ ++ ILAI + + L+ V L L L+ LL +
Sbjct: 1808 STALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGEG 1867
Query: 1264 ------------DTQGNLEHD------VHNHTEERNLAYYLSFIYSLTSVSTVCQLLATQ 1305
D+ G E H E +L +L F+ + S + +A+
Sbjct: 1868 EQEDGEEEEKKVDSSGETEKKDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASP 1927
Query: 1306 PWIQSLLYLLSIS-PSGLCKLNLLRARLLTLNLLTAILPHAQQG-----ELGIITELLTQ 1359
W + LL + S SG+ + LR RLL L++L A+LP + G I+ L +
Sbjct: 1928 KWTEVLLNIASQKCSSGIPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQIVERLFSL 1987
Query: 1360 LSHNMWKVPRTVAHHNALKKEEELDKQIEHLYCPPPSGTSNASRQGYVD-------IDSV 1412
LS MW+ P A H KE+E + +++ +QG ++ I V
Sbjct: 1988 LSDCMWETPIAQAKHAIQIKEKEQEIKLQ--------------KQGELEEEDENLPIQEV 2033
Query: 1413 SFDKEKCVCCTVECGGQSLIHGPGTRGYGVANIGITRGCYQWKFLIVNEHKGNEGTCIGV 1472
SFD EK CC VE GQ L HG G +GYG+A+ G+T GCYQWKF IV E++GNEGTC+GV
Sbjct: 2034 SFDPEKAQCCLVE-NGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGV 2092
Query: 1473 TRWPIRDYNHRTTGDMWLYRAYSGNVYHSGEQTTMLPSFTQGDYITVVLDMDAQTLSFGK 1532
+RWP+ D+NHRTT DMWLYRAYSGN+YH+GEQT L SFTQGD+IT VLDM+A+T+SFGK
Sbjct: 2093 SRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGK 2152
Query: 1533 NGEEPHLAFQDLDTSAPLYPIVLFYSTNANGEKVKITDMTVCETPRDLLCGEPYCAPVPI 1592
NGEEP LAF+D+D +A LYP V+FYS+N GEKVKI DM + TPRDLL G+P C+PV
Sbjct: 2153 NGEEPKLAFEDVD-AAELYPCVMFYSSNP-GEKVKICDMQMRGTPRDLLPGDPICSPVAA 2210
Query: 1593 LMVESYISLLRQLHKIDRWKAHVNQCLLDRLSVIKELTAAAEEDNASAFVPQADK----- 1647
++ E+ I L+R LH+ DRW +N+ +++RL IK + + + Q+ +
Sbjct: 2211 VLAEATIQLIRILHRTDRWTYCINKKMMERLHKIKICIKESGQKLKKSRSVQSREENEMR 2270
Query: 1648 ----------------GRLVLEEAQMELLCREVWPALVVMGGGDDGLRMGGKCVEKPSGR 1691
G L E Q+ LC EVWP L V+GG D GLR+GG+CV K +GR
Sbjct: 2271 EEKESKEEEKGKHTRHGLADLSELQLRTLCIEVWPVLAVIGGVDAGLRVGGRCVHKQTGR 2330
Query: 1692 VGTLLGTLKEGIAKVKDLNFDEIDL 1716
TLLG +KEG K + +DE ++
Sbjct: 2331 HATLLGVVKEGSTSAK-VQWDEAEI 2354
Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 220/396 (55%), Gaps = 18/396 (4%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG--- 246
VY WG H Q+ + R P S + + GQ CTF++ + G +L G+G
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGSYG 4057
Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKC-SEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
LG N+ + L L+ +V+ V+ C S+ H + +T GEV+SWG G++GKLGHG
Sbjct: 4058 RLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHG 4117
Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
N+ QRRP+ I L G+ V Q+S G HSA VT DG L+T+G GD+GRLG G+ ++
Sbjct: 4118 NSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKL 4176
Query: 365 PTLVTELS--DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
P VT L +G V+CG +HTL +S DG VW+ G G+ GKLG ++ ++P+ I+ L
Sbjct: 4177 PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL 4236
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG----LGLRSSSISFHT-PVLVTGLSSHQIVDV 477
++KV GT FSVALT DG V+ +G +GL H P + L+ I DV
Sbjct: 4237 CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDV 4296
Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFS 537
++G H LAL+ +VYAWGSN+ GQ G + +N V +P+ V GL+ VRQI AG S
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGH-TNHVREPTLVTGLQGKNVRQISAGRCHS 4355
Query: 538 IAYTVPPSNSALSSAFTPLCV---DVRPHTFTLIRE 570
A+T PP PL + D P + +RE
Sbjct: 4356 AAWTAPPVPPRAPGVSVPLQLGLPDTVPPQYGALRE 4391
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 198/374 (52%), Gaps = 20/374 (5%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVYGKG- 246
V WG N Q+ K P S +R HI G F++ G + G+G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 247 --WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
LGL T PLP ++P L +V H L +T +G+V+SWG GE GKLGH
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGH 3107
Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
GN + +P+L+ L K++ V+ G SHSAA++ G LYTWG G++GRLGHGD ++
Sbjct: 3108 GNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQL 3166
Query: 364 TPTLVTELSD--VGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
P LVT L+ V V+CG ++ TL L++DG V+S G G+ GKLG + TP I
Sbjct: 3167 KPKLVTALAGRRVVQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRGGSEGSDTPHEI 3225
Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQI 474
E L V ++ G FS+ALT G V+ WG G P + GL ++
Sbjct: 3226 ERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRV 3285
Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN-FSNPVDQPSKVVGLEDVCVRQICAG 533
+ V++G H LA++ +VYAWG N GQ G N F N +P+ V+GL+ V V ++ G
Sbjct: 3286 IHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVN--KKPALVIGLDAVFVNRVACG 3343
Query: 534 SLFSIAYTVPPSNS 547
S SIA+ +P ++S
Sbjct: 3344 SSHSIAWGLPNASS 3357
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 161/301 (53%), Gaps = 18/301 (5%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H L +T+EGEVY+WG GE GKLGHGN +S RPKL+ L G V ++ G +HSAA+T
Sbjct: 4147 HCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITA 4205
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSC--GESHTLVLSQDGHTVW 395
G + TWG+G +GRLGHGD + + P LV L A ++C G++ TL ++ D VW
Sbjct: 4206 SGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDD-DNVW 4264
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
S G G+ GKLG + P IE+L V KV G+ FSVALT G V+ WG G
Sbjct: 4265 SWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFH 4324
Query: 453 -LRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
L S+ P V L +I+ ++ G H +A S EVY WG N GQ G D
Sbjct: 4325 RLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG-DGTV 4383
Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTFTLIRE 570
+ +P V L+ + ++ GS A+T+ S S LS PL P + L+R+
Sbjct: 4384 TAIQRPRLVAALQGKHIVKVTCGS----AHTLALSTSQLSERLRPL--PNPPLEYDLVRD 4437
Query: 571 F 571
Sbjct: 4438 L 4438
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 219/496 (44%), Gaps = 71/496 (14%)
Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEV------------------------------- 290
VP + + C E +L ++ EG++
Sbjct: 565 VPTLSCRFQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPLPMEEVAHDVFISIAGHCE 624
Query: 291 -------------YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
YSWG GE +LGHG+T ++ P I L V V G S+SAA+
Sbjct: 625 GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAI 683
Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHT 393
T G L TWG G + RLGHG+ R PTLV LSD A+ G++H+L L+ +G
Sbjct: 684 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG-L 742
Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
V++ G G+ GKLG+ + P ++E+L RV++V AG+ FSVAL+ +G ++ WG
Sbjct: 743 VFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQFSVALSSEGQLYTWGKAT 800
Query: 451 -LG---LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ-CG 505
LG + S P LV+ L +IVDV++ +H LALS EV+ WG N Q C
Sbjct: 801 CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP 860
Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLCVDVRPHTF 565
S P+ + +V L I S S+ +T A P VD+ TF
Sbjct: 861 ASVSSEPLLRTPILVSLPTFPASGIACTSAQSLVWTQSSHQGVPRRA--PFVVDLGEPTF 918
Query: 566 TLIREFLEQYSA--CFETGDYIPFCSKVTHAQ-FILLLLRLLSSHLYLALIGARSSSVLG 622
L+ + L S+ +T + C V F L LL L+++ + +G S S L
Sbjct: 919 RLLDQLLGMCSSQDNRQTPNQESECIAVACLNLFRLQLLALIANGVEPRQVGLASGSRL- 977
Query: 623 NETAALRHVLFKLV-DMETSPEIETLLTDCLAIGASLLLPPVVEQLDLLKTLLSQD--HP 679
+L+ + L + I+ L G S+LLP E+ L +LL +
Sbjct: 978 --LCSLKTRILGLAGGSQVLRTIQVAAQQALQDGWSVLLPTAAERAQTLTSLLPSEPGQA 1035
Query: 680 LSNGQRMLLGVITSSL 695
S G R + ++ SSL
Sbjct: 1036 SSAGHRFMTDLLVSSL 1051
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 176/415 (42%), Gaps = 73/415 (17%)
Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLP----------SNIRHIEAGQFCTFLLDSTG 238
K+YTW + ++P + LP S H E F +DS
Sbjct: 592 KLYTW--------------RLAKPEAEPLPMEEVAHDVFISIAGHCEGRHF--LAIDSNH 635
Query: 239 GLLVYGKG---WLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWG 294
+G G LG +T + +P ++ LE V CS + +T G + +WG
Sbjct: 636 NAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS--YSAAITCGGNLLTWG 693
Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSHSAAVTEDGLLYTWGEGDHG 352
G + +LGHGN+ + P L++ L V V+ +G +HS A+T +GL++ WG+GD+G
Sbjct: 694 RGTYARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYG 752
Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLGHE--- 408
+LG+G+ P LV L V V G ++ LS +G W G LGH+
Sbjct: 753 KLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTW----GKATCLGHQLVE 808
Query: 409 -DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSIS---- 459
+ P+++ +L+ R+ V + +AL+ G VF WG + +S+S
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSSEPL 868
Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE---------VYAWGSNT-------MGQ 503
TP+LV+ L + ++ + L +Q + V G T +G
Sbjct: 869 LRTPILVS-LPTFPASGIACTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTFRLLDQLLGM 927
Query: 504 C-GQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAFTPLC 557
C QDN P +Q S+ + + C+ L IA V P L+S LC
Sbjct: 928 CSSQDNRQTP-NQESECIAV--ACLNLFRLQLLALIANGVEPRQVGLASGSRLLC 979
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1
SV=3
Length = 4836
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 183/339 (53%), Gaps = 21/339 (6%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
H L + + GEVYSWG G+ G+LGHG+T+ PK+I G GK V ++ G ++SAA
Sbjct: 507 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 566
Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
+T +G LYTWG G++GRLGHG + P LV L + V+CG ++ TL ++++G
Sbjct: 567 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 626
Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
VWS G G+ GKLG + TPK+IE L+ V KV G+ FS+ALT DG V+ WG G
Sbjct: 627 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKG 685
Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
+ P L+ GL +++DV+ G +H LAL++ +EV++WGSN QC
Sbjct: 686 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 743
Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
D +P+ + GL+ + I G S A++ S S S P VD+ TF
Sbjct: 744 DTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 800
Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
+ L Q S + T D+ P K A L LLRL
Sbjct: 801 EQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRL 839
Score = 194 bits (492), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 212/414 (51%), Gaps = 32/414 (7%)
Query: 146 LADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGCNLHHQILDEV 205
LA DN + D+ S+ S + TP L + +KV+ WG N Q+
Sbjct: 2927 LASDNEEEEDDKGSTGS---LIRKKTPGLE------STATIRTKVFVWGLNDKDQLGGLK 2977
Query: 206 RGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----GLLVYGKGWLGLANTTIQPL 258
K P S N+ + G F + G G G+ LG+++ T+ P+
Sbjct: 2978 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTV-PI 3036
Query: 259 PKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
P+++ L + +V H +T +G+V+SWG G+ GKLGH + ++ +P+LI
Sbjct: 3037 PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3096
Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVG 375
L KR+ ++ G SHSAA+T G LYTWG G++GRLGHGD ++ P +V L V
Sbjct: 3097 -LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3155
Query: 376 AVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
V+CG ++ TL L+ +G V+S G G+ GKLG + P+ IE L V ++ G
Sbjct: 3156 QVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECG 3214
Query: 434 TSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALS 488
FS+ALT G+V+ WG G S + P +V GL +IV V++G H LA++
Sbjct: 3215 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3274
Query: 489 QYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVRQICAGSLFSIAYT 541
+VYAWG N GQ Q N + V+ +P+ V GLE + ++ GS S+A+T
Sbjct: 3275 DSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H L ++SEGEVYSWG E GKLGHGN RP++I L G V V+AG +HSA VT
Sbjct: 4052 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4110
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
G LYTWG+G +GRLGH D + + P LV L V ++C G++ TL L+ D TVW
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDD-DTVW 4169
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
S G G+ GKLG + P I++L V KV G+ FSVALT G V+ WG G
Sbjct: 4170 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4229
Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
S P V GL +++ ++ G H + ++ EVY WG N GQ G D +
Sbjct: 4230 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4288
Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
N + +P V L+ V ++ GS ++A+ T P+++ A P+
Sbjct: 4289 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4335
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 127/226 (56%), Gaps = 11/226 (4%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
C + +T+EGE+Y+WG G +G+LGHG++ + P L+ GL G +V V+ +G +
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 617
Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
+ AVTE+G +++WG+GD+G+LG G TP L+ +L DV V CG ++ L++DG
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDG 677
Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
V+S G G+ +LGH V PK++E L+ +V V AG++ +ALT D V WG
Sbjct: 678 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 736
Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
+ ++ P + GL S IV ++ G + A S +E
Sbjct: 737 NDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSFAWSSCSE 782
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)
Query: 282 LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
L+ G +Y WG G+LG G + P + L R Q+ G AVT
Sbjct: 3948 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4004
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
DG LY G G GRLG G +S TPTL+ + V AV+ G H L LS +G V+
Sbjct: 4005 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4063
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
S G GKLGH + P+VIE+LR V V AG + S +T G ++ WG G
Sbjct: 4064 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
S S P LV L H+++D++ GD+ L L+ + V++WG G+ G+
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
S+ P K+ L + V ++ GS FS+A T
Sbjct: 4184 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 21/284 (7%)
Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS------NIRHIEAGQFCTFLLDSTG 238
A +VY+WGC ++ P++ S S ++ HI G + + + G
Sbjct: 512 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571
Query: 239 GLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWG 294
L +G+ G LG ++ + +P V + + V+ S +A L VT G+V+SWG
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 295 VGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
G++GKLG G + + PKLI L V +V G S A+T+DG +Y+WG+GD+ RL
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRL 690
Query: 355 GHGDLKSRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK 412
GHG + P L+ L V V+ G +H L L++D V S GS + + H DT +
Sbjct: 691 GHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE-VHSWGSND--QCQHFDTLR 747
Query: 413 VTTPK--VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
VT P+ + L + + G + S A W W +GLR
Sbjct: 748 VTKPEPTALPGLDSKHIVGIACGPAQSFA--WSSCSE-WSIGLR 788
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 873 LIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPS 920
LID ER L LL+G + + P + E E WL++S+ S GL+ S
Sbjct: 1303 LIDTERNLGLLLGLHASYLAMSTPLSPVEVECAKWLQSSIFSGGLQTS 1350
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 183/339 (53%), Gaps = 21/339 (6%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM---GGLYGKRVTQVSAGHSHSAA 336
H L + + GEVYSWG G+ G+LGHG+T+ PK+I G GK V ++ G ++SAA
Sbjct: 506 HYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAA 565
Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA--VSCG--ESHTLVLSQDGH 392
+T +G LYTWG G++GRLGHG + P LV L + V+CG ++ TL ++++G
Sbjct: 566 ITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQ 625
Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
VWS G G+ GKLG + TPK+IE L+ V KV G+ FS+ALT DG V+ WG G
Sbjct: 626 -VWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKG 684
Query: 453 -----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ- 506
+ P L+ GL +++DV+ G +H LAL++ +EV++WGSN QC
Sbjct: 685 DNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHF 742
Query: 507 DNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALSSAF-TPLCVDVRPHTF 565
D +P+ + GL+ + I G S A++ S S S P VD+ TF
Sbjct: 743 DTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWS---SCSEWSIGLRVPFVVDICSMTF 799
Query: 566 TLIREFLEQYSACFE-TGDYIPFCSKVTHAQFILLLLRL 603
+ L Q S + + D+ P K A L LLRL
Sbjct: 800 EQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRL 838
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 197/373 (52%), Gaps = 23/373 (6%)
Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPS--NIRHIEAGQFCTFLLDSTG-----G 239
+KV+ WG N Q+ K P S N+ + G F + G G
Sbjct: 2958 RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 240 LLVYGKGWLGLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
G+ LG+++ T+ P+P+++ L + +V H +T +G+V+SWG G+
Sbjct: 3018 EATNGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
GKLGH + ++ +P+LI L KR+ ++ G SHSAA+T G LYTWG G++GRLGHGD
Sbjct: 3077 GKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 359 LKSRHTPTLVTEL--SDVGAVSCG--ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT 414
++ P +V L V V+CG ++ TL L+ +G V+S G G+ GKLG +
Sbjct: 3136 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-LVFSWGDGDFGKLGRGGSEGCN 3194
Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG-----LRSSSISFHTPVLVTGL 469
P+ IE L V ++ G FS+ALT G+V+ WG G S + P +V GL
Sbjct: 3195 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 3254
Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVD-QPSKVVGLEDVCVR 528
+IV V++G H LA++ +VYAWG N GQ Q N + V+ +P+ V GLE +
Sbjct: 3255 RGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ--QGNGTTTVNRKPTLVQGLEGQKIT 3312
Query: 529 QICAGSLFSIAYT 541
++ GS S+A+T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 156/287 (54%), Gaps = 13/287 (4%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H L ++SEGEVYSWG E GKLGHGN RP++I L G V V+AG +HSA VT
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTA 4108
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSC--GESHTLVLSQDGHTVW 395
G LYTWG+G +GRLGH D + + P LV L V ++C G++ TL L+ D TVW
Sbjct: 4109 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDD-DTVW 4167
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG--- 452
S G G+ GKLG + P I++L V KV G+ FSVALT G V+ WG G
Sbjct: 4168 SWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH 4227
Query: 453 --LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
S P V GL +++ ++ G H + ++ EVY WG N GQ G D +
Sbjct: 4228 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG-DGTT 4286
Query: 511 NPVDQPSKVVGLEDVCVRQICAGSLFSIAY-TVPPSNSALSSAFTPL 556
N + +P V L+ V ++ GS ++A+ T P+++ A P+
Sbjct: 4287 NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPM 4333
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 127/226 (56%), Gaps = 11/226 (4%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS--AGHSH 333
C + +T+EGE+Y+WG G +G+LGHG++ + P L+ GL G +V V+ +G +
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV-AGLKGLKVIDVACGSGDAQ 616
Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDG 391
+ AVTE+G +++WG+GD+G+LG G TP L+ +L DV V CG ++ L++DG
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDG 676
Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
V+S G G+ +LGH V PK++E L+ +V V AG++ +ALT D V WG
Sbjct: 677 Q-VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 735
Query: 452 G-----LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNE 492
+ ++ P + GL + IV ++ G + A S +E
Sbjct: 736 NDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSE 781
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 131/273 (47%), Gaps = 18/273 (6%)
Query: 282 LTVTSEGEVYSWGVGEHGKLG--HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
L+ G +Y WG G+LG G + P + L R Q+ G AVT
Sbjct: 3946 LSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATL---RPVQLIGGEQTLFAVTA 4002
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVW 395
DG LY G G GRLG G +S TPTL+ + V AV+ G H L LS +G V+
Sbjct: 4003 DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VY 4061
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL-- 453
S G GKLGH + P+VIE+LR V V AG + S +T G ++ WG G
Sbjct: 4062 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSI--GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
S S P LV L H++VD++ GD+ L L+ + V++WG G+ G+
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
S+ P K+ L + V ++ GS FS+A T
Sbjct: 4182 -SDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 873 LIDMERALALLIGKTLGDMLLGPPEAHEETETVHWLKTSLLSAGLEPS 920
LID ER L LL+G + + P + E E WL++S+ S GL+ S
Sbjct: 1302 LIDTERNLGLLLGLHASYLAMSTPLSPVEIECAKWLQSSIFSGGLQTS 1349
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 149/285 (52%), Gaps = 21/285 (7%)
Query: 236 STGGLLVYGKGW-----LGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEG 288
S G+ VY GW LG N++ PLP + I ++ C ++H L VT EG
Sbjct: 83 SQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA---CGDSHCLAVTMEG 139
Query: 289 EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
EV SWG ++G+LG G+T P+ I G R+ V+AG H+AAVTEDG LY WG
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 198
Query: 349 GDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
G +G LG GD R P VT + V+CG HT+ +S G +++ G G+LG
Sbjct: 199 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG-ALYTYGWSKYGQLG 257
Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
H D P +EAL + ++ G ++ALT DG ++ WG +G+ +++
Sbjct: 258 HGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQ 316
Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
+PV V ++V VS G H LA+++ N V+AWG T GQ G
Sbjct: 317 CSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 9/192 (4%)
Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSC 379
++V +SAG SHS A+ ++ +WG G+ G+LGHGD + R +PT ++ L + +V+C
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
G HT+ SQ G V+S G G+ G+LGH ++ + TP I+AL R++++ G S +A
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 440 LTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEV 493
+T +G V WG LGL + S P + +I V+ G H A+++ ++
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLGDTEDSL-VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 193
Query: 494 YAWGSNTMGQCG 505
Y WG G G
Sbjct: 194 YGWGWGRYGNLG 205
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 14/244 (5%)
Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK 245
+V +WG N + Q+ L + ++Q+ I+ + AG T + G L YG
Sbjct: 139 GEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL--YGW 196
Query: 246 GW-----LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
GW LGL + T + +P+RV +S+ C H ++V+ G +Y++G ++G+
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTSTGG-EKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
LGHG+ P + L ++Q+S G H+ A+T DG LY WG G++G G+
Sbjct: 256 LGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
+ +P V D V VSCG HTL +++ + V++ G G G+LG ++ PK+
Sbjct: 315 DQCSPVQVRFPDDQKVVQVSCGWRHTLAVTER-NNVFAWGRGTNGQLGIGESVDRNFPKI 373
Query: 419 IEAL 422
IEAL
Sbjct: 374 IEAL 377
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 18/318 (5%)
Query: 243 YGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
YG+ LG + I P+R V C H + V +G VY+ G + G+LG
Sbjct: 9 YGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVG-CGLRHTVFVLDDGTVYTCGCNDLGQLG 67
Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-HGDLKS 361
H S+++P+ ++ L + + V+ G +H+ A+ + G +Y WG G+LG G +
Sbjct: 68 HEK--SRKKPEQVV-ALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEEC 124
Query: 362 RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE-DTGKVTTPKV 418
P + LSD+ V+CG H+L LS+ V+ G G+LG D K T+P++
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSK-ASEVFCWGQNKYGQLGLGIDCQKQTSPQL 183
Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSH 472
I++L +V AG + S LT G +F WG LGL + + P L+ L S
Sbjct: 184 IKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY-VPNLLKSLRSQ 242
Query: 473 QIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICA 532
+IV + G+ H AL++ V+ +G+ GQ G ++ S+ ++ P KV L V Q+
Sbjct: 243 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN-PRKVFELMGSIVTQVAC 301
Query: 533 GSLFSIAYTVPPSNSALS 550
G + A+ VP S S
Sbjct: 302 GRQHTSAF-VPSSGRIYS 318
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 171/395 (43%), Gaps = 48/395 (12%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
VYT GCN Q+ E K + NI + G+ T L+ G + +G G
Sbjct: 55 VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDG 114
Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG- 304
LGL + +P+ + + I + V+ C H L ++ EV+ WG ++G+LG G
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
+ Q P+LI L G QV+AG +HS +T G ++ WG G+LG D R+
Sbjct: 174 DCQKQTSPQLIK-SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV 232
Query: 365 PTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEA 421
P L+ L + + CGE HT L+++G V++ G+G G+LGH T P KV E
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291
Query: 422 LRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGD 481
+ + C S + G ++ +GLG L TG +S++ ++
Sbjct: 292 MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKG 343
Query: 482 SHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAY 540
+ W S GQC QD +G ED CV++I +G S ++
Sbjct: 344 N-------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSH 377
Query: 541 TVPPSNSALSSAFTPLCVDVRPHTFTLIREFLEQY 575
P N F C D +T+ ++++
Sbjct: 378 YSSPQNCGPPDDFR--CSDPSKQIWTVNEALIQKW 410
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
WG +G+LG G L RR + K+V V G H+ V +DG +YT G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
D G+LGH KSR P V L ++ AV+CGE+HTL L+ G W + S G LG
Sbjct: 60 CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
G E+ +V P+ I++L ++ +V G S+AL+ VF WG LGL
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
+P L+ L + V+ G +H L+ ++ WG N GQ G ++ N P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234
Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
+ L + IC G + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
C H + V +G VY+ G + G+LGH S+++P+ ++ L + + VS G +H+
Sbjct: 41 CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97
Query: 336 AVTEDGLLYTWGEGDHGRLG-HGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
A+ + G +Y WG G+LG G + P + LSD+ V+CG H+L LS+
Sbjct: 98 ALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156
Query: 393 TVWSMGSGNLGKLGHE-DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
V+ G G+LG + K T+P++I++L +V AG + S LT G +F WG
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216
Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
LGL + + P L+ L S +IV + G+ H AL++ V+ +G+ GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
++ S+ ++ P KV L V QI G + A+ VP S S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTQIACGRQHTSAF-VPSSGRIYS 318
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 160/372 (43%), Gaps = 44/372 (11%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
VYT GCN Q+ E K + NI + G+ T L+ G + +G G
Sbjct: 55 VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
LGL + +P+ + + I + V+ C H L ++ EV+ WG ++G+LG G
Sbjct: 115 QLGLQGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
++ ++ L G QV+AG +HS +T G ++ WG G+LG D R+ P
Sbjct: 174 ECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
L+ L + + CGE HT L+++G V++ G+G G+LGH T P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
+ C S + G ++ +GLG L TG +S++ ++ +
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ--------LGTGSTSNRKSPFTVKGN 344
Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLED-VCVRQICAGSLFSIAYT 541
W S GQC QD +G ED CV++I +G S ++
Sbjct: 345 -------------WFSYN-GQCPQD------------IGSEDYFCVKRIFSGGDQSFSHY 378
Query: 542 VPPSNSALSSAF 553
P + F
Sbjct: 379 SSPQSCGPPDDF 390
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
WG +G+LG G L R+ + K+V V G H+ V +DG +YT G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVN----KKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
D G+LGH KSR P V L ++ AVSCGE+HTL L+ G W + S G LG
Sbjct: 60 CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
G E+ +V P+ I++L ++ +V G S+AL+ VF WG LGL
Sbjct: 118 LQGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175
Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
+P L+ L + V+ G +H L+ ++ WG N GQ G ++ N P+
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234
Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
+ L + IC G + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 23/283 (8%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGH---GNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
C H + + +GEVY+ G+ G+LGH GN Q +G L + + V+ G S
Sbjct: 41 CGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQ------IGALADQHIIHVACGES 94
Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLK-SRHTPTLVTELSD--VGAVSCGESHTLVLSQ 389
HS A+++ G L++WG G G+LG + S P L+ +L+ + VSCG H L L+
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAA 154
Query: 390 DGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
DG ++ G + G+LG ++ +P+ + +L + +V AG + S AL+ G VF
Sbjct: 155 DGQ-FFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 449 WG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
WG LGL S +P V L + ++V +S G+ H L++ V+ +G+ + G
Sbjct: 214 WGMNNAGQLGL-SDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCG 272
Query: 503 QCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPS 545
Q G D+ ++ V+ P +V+ L V QI G ++A+ VP S
Sbjct: 273 QLGHDSMNDEVN-PRRVLELMGSEVTQIACGRQHTLAF-VPSS 313
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 124/256 (48%), Gaps = 13/256 (5%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHS 334
C E+H L ++ G+++SWG G G+LG T S P+LI L + + QVS G+ H
Sbjct: 91 CGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK-LNQQTILQVSCGNWHC 149
Query: 335 AAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQDG 391
A+ DG +TWG+ HG+LG G + S+ +P V L + V+ G +H+ LS G
Sbjct: 150 LALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 209
Query: 392 HTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL 451
V+ G N G+LG D +P ++ LR +V + G + LT G VF +G
Sbjct: 210 -AVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 268
Query: 452 G----LRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLAL-SQYNEVYAWGSNTMGQCG 505
G L S++ P V L ++ ++ G H LA +YA+G GQ G
Sbjct: 269 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328
Query: 506 QDNFSNPVDQPSKVVG 521
+ N V PS V G
Sbjct: 329 TGHTCN-VKCPSPVKG 343
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 108/225 (48%), Gaps = 17/225 (7%)
Query: 293 WGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
WG G+ G L P+ + G + + V +V+ G +HS + EDG +YT G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQ-VCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNT 62
Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTV-WSMGS-GNLGKLG 406
G+LGH + + P + L+D + V+CGESH+L LS G W GS G LG +
Sbjct: 63 KGQLGHE--REGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT 120
Query: 407 HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISF 460
ED+ V P++I+ L + + +V G +AL DG F WG LGL S
Sbjct: 121 TEDS--VAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQ 178
Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
+P V L + V+ G +H ALS V+ WG N GQ G
Sbjct: 179 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 11/186 (5%)
Query: 365 PTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
P + +SD V V+CG +H++ L +DG V++ G G+LGHE G P+ I AL
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGE-VYTCGLNTKGQLGHEREG--NKPEQIGAL 81
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVD 476
+ V G S S+AL+ G +F WG LGL ++ S P L+ L+ I+
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQ 141
Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
VS G+ H LAL+ + + WG N+ GQ G P +V LE + + Q+ AG
Sbjct: 142 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 201
Query: 537 SIAYTV 542
S A ++
Sbjct: 202 SFALSL 207
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 164 TDIDSTSTPKLTYNIGDTDIS------------VAHSKVYTWGCNLHHQ--ILDEVRGKC 209
T DS + P+L + I A + +TWG N H Q + E +
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQA 179
Query: 210 SRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLE 265
S R++SL + + AG +F L +G + +G G LGL++ + P V L
Sbjct: 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL 239
Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
+ +S C E H +T G V+++G G G+LGH + + P+ ++ L G VT
Sbjct: 240 RTQKVVYIS-CGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297
Query: 326 QVSAGHSHS-AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
Q++ G H+ A V GL+Y +G G G+LG G + P+ V
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
V+ WG N Q+ L + + + S ++ L + + +I G+ T +L +GG+ +G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGH 303
G LG + + P+RV LE ++ C H L V S G +Y++G G G+LG
Sbjct: 271 CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGT 329
Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSA 329
G+T + + P + G + Q+SA
Sbjct: 330 GHTCNVKCPSPVK-GYWAAHSGQLSA 354
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 17/285 (5%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
C H + V +G VY+ G + G+LGH S+++P+ ++ L + + VS G +H+
Sbjct: 41 CGLRHTVFVLDDGTVYTCGCNDLGQLGHEK--SRKKPEQVV-ALDAQNIVAVSCGEAHTL 97
Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGH 392
A+ + G +Y WG G+LG G + P + LSD+ V+CG H+L LS+
Sbjct: 98 ALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK-AS 156
Query: 393 TVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG- 450
V+ G G+LG D K T+P+++++L +V AG + S LT G +F WG
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 216
Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
LGL + + P L+ L S +IV + G+ H AL++ V+ +G+ GQ G
Sbjct: 217 NKFGQLGLNDENDRY-VPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
++ S+ ++ P KV L V +I G + A+ VP S S
Sbjct: 276 HNSTSHEIN-PRKVFELMGSIVTEIACGRQHTSAF-VPSSGRIYS 318
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 9/270 (3%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KG 246
VYT GCN Q+ E K + NI + G+ T L+ G + +G G
Sbjct: 55 VYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 247 WLGLANTT-IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
LGL + +P+ + + I + V+ C H L ++ EV+ WG ++G+LG G
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVA-CGYYHSLALSKASEVFCWGQNKYGQLGLGT 173
Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
++ ++ L G QV+AG +HS +T G ++ WG G+LG D R+ P
Sbjct: 174 DCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 233
Query: 366 TLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEAL 422
L+ L + + CGE HT L+++G V++ G+G G+LGH T P KV E +
Sbjct: 234 NLLKSLRSQKIVYICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
C S + G ++ +GLG
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLG 322
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 293 WGVGEHGKLGHGN-----TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG 347
WG G+LG G L R+ + KRV V G H+ V +DG +YT G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFIN----KRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 348 EGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHT-VWSMGS-GNLG 403
D G+LGH KSR P V L ++ AVSCGE+HTL L+ G W + S G LG
Sbjct: 60 CNDLGQLGHE--KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 404 KLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
+G E+ +V P+ I++L ++ +V G S+AL+ VF WG LGL +
Sbjct: 118 LVGSEECIRV--PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175
Query: 458 ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS 517
+P L+ L + V+ G +H L+ ++ WG N GQ G ++ N P+
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND-ENDRYVPN 234
Query: 518 KVVGLEDVCVRQICAGSLFSIAYT 541
+ L + IC G + A T
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALT 258
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 343 LYTWGEGDHGRLGHGD------LKSRHTPTLVTE-LSDVGAVSCGESHTLVLSQDGHTVW 395
+ WG G+LG G L+ R + + + + DVG CG HT+ + DG TV+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVG---CGLRHTVFVLDDG-TVY 56
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL---- 451
+ G +LG+LGHE + K P+ + AL + V G + ++AL G V+ WGL
Sbjct: 57 TCGCNDLGQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDG 114
Query: 452 --GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
GL S P + LS QIV V+ G H LALS+ +EV+ WG N GQ G
Sbjct: 115 QLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTD 174
Query: 510 SNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
P + L + Q+ AG S T+
Sbjct: 175 CKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 188 SKVYTWGCNLHHQILDEVRGKCSR-PR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYG 244
+VY WG + Q+ +C R PR ++SL I + G + + L + +G
Sbjct: 103 GQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWG 162
Query: 245 K---GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
+ G LGL + Q P+ + I + V+ AH +T G ++ WG + G+
Sbjct: 163 QNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA-AGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 301 LGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLK 360
LG + + P L+ L +++ + G H+AA+T++G ++T+G G +G+LGH
Sbjct: 222 LGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV 418
P V EL S V ++CG HT ++S G G G+LG T +P
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFT 340
Query: 419 IEA 421
++
Sbjct: 341 VKG 343
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 190 VYTWGCNLHHQI-LDEVRGKCSRPRLQSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
++ WG N Q+ L++ + L+SL S I +I G+ T L GG+ +G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 248 LGLA--NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLT-VTSEGEVYSWGVGEHGKLGHG 304
G N+T + R E ++ C H V S G +YS+G+G +G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 305 NTLSQRRPKLIMGGLY 320
+T +++ P + G Y
Sbjct: 331 STSNRKSPFTVKGNWY 346
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 8/211 (3%)
Query: 213 RLQSL--PSNIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAA 267
R +S+ I I G + + L G L +G+ G LG+ ++ A
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189
Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
V L+ EAH + ++ G +YSWG E G+LG G+T S+ P LI GL ++V V
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI-EGLDNQKVEFV 248
Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGESHTL 385
+ G SHSA +T+DGLL+T+G G HG+LGH ++ P LV EL V ++CG HTL
Sbjct: 249 ACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTL 308
Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
D V+S GSG G+LG+ T P
Sbjct: 309 AYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
E I+ ++ C + H L ++ GE+++WG HG+LG G I+ L G +
Sbjct: 137 EKKIIQIT---CGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193
Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGES 382
Q+SAG +HS A++ G +Y+WG+ + G+LG G +S+ P+L+ L + V V+CG S
Sbjct: 194 AQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGS 253
Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTW 442
H+ +L+QDG +++ G+G G+LGH T P ++ L +RV ++ G ++A
Sbjct: 254 HSALLTQDG-LLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVS 312
Query: 443 D-GLVFWWGLG 452
D G VF +G G
Sbjct: 313 DLGKVFSFGSG 323
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 34/301 (11%)
Query: 221 IRHIEAG-QFCTFLLDSTGGLLVYGKGWLG------LANTTIQPLPKRVPLEAAIVSLSV 273
+R +E Q C S G L V +G G LA + PK + L + SV
Sbjct: 47 LRRVEVTRQLCC----SPGRLAVLERGGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSV 102
Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
+ +E H+L ++S+G+ + + L + L + K++ Q++ G H
Sbjct: 103 DQGAE-HMLILSSDGKPFEYDNYSMKHLRFESILQE------------KKIIQITCGDYH 149
Query: 334 SAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDV--GAVSCGESHTLVLSQD 390
S A+++ G L+ WG+ HG+LG G S TP +V L+ V +S GE+H++ LS
Sbjct: 150 SLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMS 209
Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
G+ ++S G G+LG T P +IE L +V V G S S LT DGL+F +G
Sbjct: 210 GN-IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFG 268
Query: 451 LGL-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA-LSQYNEVYAWGSNTMGQC 504
G +S+ + P LV L +++ ++ G H LA +S +V+++GS GQ
Sbjct: 269 AGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQL 328
Query: 505 G 505
G
Sbjct: 329 G 329
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH--------IEAGQFCTFLLDSTGGL 240
+++ WG NLH Q+ G + + P + H I AG+ + L +G +
Sbjct: 158 ELFAWGQNLHGQL-----GVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNI 212
Query: 241 LVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVG 296
+GK G LGL +T + P + L+ V C +H +T +G ++++G G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270
Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTED-GLLYTWGEGDHGRLG 355
+HG+LGH +T ++ RP L+ L G RVTQ++ G H+ A D G ++++G G G+LG
Sbjct: 271 KHGQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLG 329
Query: 356 HGDLKSRHTP 365
+G + + P
Sbjct: 330 NGGTRDQLMP 339
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAG 433
+ +V G H L+LS DG K D + + L++ ++ ++ G
Sbjct: 99 IHSVDQGAEHMLILSSDG------------KPFEYDNYSMKHLRFESILQEKKIIQITCG 146
Query: 434 TSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLAL 487
S+AL+ G +F WG LG+ S TP +V L+ + +S G++H +AL
Sbjct: 147 DYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMAL 206
Query: 488 SQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQI-CAGS 534
S +Y+WG N GQ G + + D PS + GL++ V + C GS
Sbjct: 207 SMSGNIYSWGKNECGQLGLGH-TESKDDPSLIEGLDNQKVEFVACGGS 253
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 410 TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHTPVLVTGL 469
+G TPK I+ + ++ V G + L+ DG F + S + L
Sbjct: 82 SGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPF------EYDNYSMKHLRFESIL 135
Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQ 529
+I+ ++ GD H LALS+ E++AWG N GQ G P V L V + Q
Sbjct: 136 QEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQ 195
Query: 530 ICAGSLFSIAYTV 542
I AG S+A ++
Sbjct: 196 ISAGEAHSMALSM 208
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 168 STSTPKLTYNIGDTDISV-----AHS-------KVYTWGCNLHHQI-LDEVRGKCSRPRL 214
ST+TP++ ++ ++ AHS +Y+WG N Q+ L K +
Sbjct: 178 STTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLI 237
Query: 215 QSLPS-NIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLA--NTTIQPLPKRVPLEAAIVSL 271
+ L + + + G + LL G L +G G G N+T L R L A +V
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNEL--RPCLVAELVGY 295
Query: 272 SVSK--CSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRP 312
V++ C H L S+ G+V+S+G G+ G+LG+G T Q P
Sbjct: 296 RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMP 339
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 141/294 (47%), Gaps = 16/294 (5%)
Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGG 318
P+R+ + + L + E H L + S VYS G G+LG S RP+ I
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ-A 70
Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG-- 375
L V VS G HS AV G ++ WG G G+LG G+ K PT + L+ +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 376 AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGT 434
VSCG H+L LS+DGH V+S G + G+LG +++ P+ +++L + +V AG
Sbjct: 131 QVSCGHYHSLALSEDGH-VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189
Query: 435 SFSVALTWDGLVFWWG------LGLRSSSIS--FHTPVLVTGLSSHQIVDVSIGDSHVLA 486
+ S AL+ G F WG L L + + + P + L + ++ +S G H
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAV 249
Query: 487 LSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
L++ +V+ +G N+ GQ Q + + P + G+ V QI S +IAY
Sbjct: 250 LTEEGQVFTFGGNSSGQL-QPSPRSGQRGPQLIEGIGGR-VSQIECASYHTIAY 301
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 24/254 (9%)
Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
+SW G R+P+ + G G + Q ++G HS + + +Y+ G+
Sbjct: 3 FSWAAG------------SRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNS 50
Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
G+LG +S P + L+D V VSCG+ H++ + G V++ G+G+ G+LG
Sbjct: 51 WGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKG-KVFAWGAGSEGQLGIG 109
Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
+ +++ P I+AL ++ +V G S+AL+ DG VF WG LGL +S S
Sbjct: 110 EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA 169
Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNPVDQPSKV 519
P V L + V+ G +H ALS + WGSN GQ + + +P +
Sbjct: 170 IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI 229
Query: 520 VGLEDVCVRQICAG 533
L+++ V I G
Sbjct: 230 GALKNLSVIYISCG 243
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
+ GE H+L+L + H V+S G + G+LG P+ I+AL V V G
Sbjct: 27 AASGEHHSLLLFSN-HRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEH 85
Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
SVA+ G VF WG G ISF P + L+ +I+ VS G H LALS+
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGIGEFKEISF-MPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
V++WG N+ GQ G S P KV LE + + Q+ AG S A ++
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 23/315 (7%)
Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPR-LQSLPS-NIRHIEAGQFCTFLLDSTGGLLVY 243
++ +VY+ G N Q+ RP +Q+L ++ + G+ + + G + +
Sbjct: 39 SNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAW 98
Query: 244 G---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
G +G LG+ I +P ++ A I + VS C H L ++ +G V+SWG G
Sbjct: 99 GAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVS-CGHYHSLALSEDGHVFSWGRNSEG 157
Query: 300 KLGHG-NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
+LG G N+ SQ P+ + L G + QV+AG +HS A++ G + WG G+L
Sbjct: 158 QLGLGKNSRSQAIPQKVK-SLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSG 216
Query: 359 LKSR---HTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKV 413
K + + P + L ++ +SCG HT VL+++G V++ G + G+L
Sbjct: 217 NKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ-VFTFGGNSSGQLQPSPRSGQ 275
Query: 414 TTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPV------LV 466
P++IE + RV ++ + ++A + G V G G +S H +
Sbjct: 276 RGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDIT 334
Query: 467 TGLSSHQIVDVSIGD 481
L++ +VD+ + D
Sbjct: 335 CLLAAEDLVDIEVKD 349
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 14/287 (4%)
Query: 266 AAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVT 325
A+I V S + L VT EV+ +G+ LG G+ S PK + G L GK++
Sbjct: 19 ASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG-LCGKKIK 77
Query: 326 QVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGE 381
+S G H TEDG++Y WG + +LG+G P V + V V+CG
Sbjct: 78 SLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS 137
Query: 382 SHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSFSVAL 440
H++ L+ DG V++ G N G++G T TP KV L RV + G + S+A+
Sbjct: 138 HHSMALAADGE-VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAV 196
Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
+G V+ WG LGL ++ TPV V L S + + G +H LAL+ +Y
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
AWG+NT GQ G N +N + +V E V C + S A T
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKT 302
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
LG + +PK++ S+S S HVL T +G VY+WG + +LG+G T
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
P + L K+V +V+ G HS A+ DG ++ WG + G++G G ++ TP
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRK 173
Query: 368 VT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
VT + V ++CG++ ++ + +G V+ G G+LG + G TP + AL
Sbjct: 174 VTNCLHIKRVVGIACGQTSSMAVLDNGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHS 232
Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG 450
V ++ G + ++ALT +GL++ WG
Sbjct: 233 VCVNQIVCGYAHTLALTDEGLLYAWG 258
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 6/211 (2%)
Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
G LG T P +V I + C H + + ++GEV++WG G++G
Sbjct: 103 GYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGS 162
Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
G+T +Q P+ + L+ KRV ++ G + S AV ++G +Y WG +G+LG G+ ++
Sbjct: 163 GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222
Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
TP V L V + CG +HTL L+ +G +++ G+ G+LG + + +P I
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGNKNNLLSPAHI-M 280
Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
+ K RV ++ C S A T G V+ WG
Sbjct: 281 VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRH---IEAGQFCTFLLDSTG--- 238
A +V+ WG N Q+ PR + +I+ I GQ + + G
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203
Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
G G G LGL N Q P RV AA+ S+ V++ C AH L +T EG +Y+WG
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
+G+LG GN + P IM + +RV +++A HS SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGNKNNLLSPAHIM--VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAV 337
E H L + + V S G G+LG P+ I L V VS G HS AV
Sbjct: 32 ERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKEHSLAV 90
Query: 338 TEDGLLYTWGEGDHGRLGHGDLKS-RHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTV 394
G ++ WG G G+LG G+ K TP + L+D+ VSCG H+L LS+D V
Sbjct: 91 CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQ-V 149
Query: 395 WSMGSGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
+S G + G+LG ++ +P+ + +L + +V AG + S AL+ G F WG
Sbjct: 150 FSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNS 209
Query: 451 -----LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
L R+ + + P+ V L + +V +S GD+H L+Q +V+ +G N GQ G
Sbjct: 210 AGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 506 QDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAY 540
P + ++V D V QI GS ++AY
Sbjct: 270 YS--PTPEKRGPQLVERIDGLVSQIDCGSYHTLAY 302
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 42/329 (12%)
Query: 198 HHQIL---DEVRGKCSRPRLQ--SLPSNIRHIE--------AGQFCTFLLDSTGGLLVYG 244
+H++L D RG+ R Q LP I+ +E G+ + + G + +G
Sbjct: 41 NHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWG 100
Query: 245 ---KGWLGLAN-TTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
+G LG+ I PK++ I + VS C H L ++ + +V+SWG HG+
Sbjct: 101 AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVS-CGHYHSLALSKDSQVFSWGKNSHGQ 159
Query: 301 LGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDL 359
LG G SQ P+ + L G + QV+AG +HS A++ G + WG G+L L
Sbjct: 160 LGLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA---L 215
Query: 360 KSRHTPTLVTELSDVGA--------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG 411
R+ P + VGA +SCG++HT VL+QDG V++ G G+LG+ T
Sbjct: 216 SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTP 274
Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTW-DGLVFWWGLGLRSSSISFHTPVLVTG-- 468
+ P+++E + V ++ G+ ++A G V +G G +S H L
Sbjct: 275 EKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFD 333
Query: 469 ----LSSHQIVDVSIGDSHVLALSQYNEV 493
+S+ VDV + H+ A + N V
Sbjct: 334 ISCLISAEDFVDVQV--KHIFAGTYANFV 360
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 23/254 (9%)
Query: 291 YSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGD 350
+ WG L +RR G G + Q ++G HS + + + + G+
Sbjct: 3 FCWG-------ADSRELQRRR----TAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNS 51
Query: 351 HGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE 408
G+LG + P + L V VSCG+ H+L + G V++ G+G+ G+LG
Sbjct: 52 RGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGR-VFAWGAGSEGQLGIG 110
Query: 409 DTGKVT-TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
+ +++ TPK I L ++ +V G S+AL+ D VF WG LGL S
Sbjct: 111 EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQA 170
Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPV--DQPSKV 519
+P V L + V+ G +H ALS + WGSN+ GQ + PV ++P V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230
Query: 520 VGLEDVCVRQICAG 533
L+++ V I G
Sbjct: 231 GALKNLGVVYISCG 244
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
+ GE H+L+L + H V S G + G+LG + P+ I+AL V V G
Sbjct: 28 AASGERHSLLLLTN-HRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEH 86
Query: 437 SVALTWDGLVFWWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
S+A+ G VF WG G ISF TP + L+ +I+ VS G H LALS+
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGEFKEISF-TPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 490 YNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
++V++WG N+ GQ G P +V LE + + Q+ AG S A ++
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 37/236 (15%)
Query: 171 TPKLTYNIGDTDI---SVAH---------SKVYTWGCNLHHQ--ILDEVRGKCSRPRLQS 216
TPK + D I S H S+V++WG N H Q + E + S R++S
Sbjct: 118 TPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS 177
Query: 217 LPS-NIRHIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLE-AAIVSL 271
L + + AG +F L G +G G L L+ + P+ PL A+ +L
Sbjct: 178 LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNV-PVQSNKPLSVGALKNL 236
Query: 272 SVS--KCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI--MGGLYGKRVTQV 327
V C +AH +T +G+V+++G G+LG+ T +R P+L+ + GL V+Q+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL----VSQI 292
Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLKSRHTPTLVTELSDVGAVSCGE 381
G H+ A Y G GHG D P +TE D+ + E
Sbjct: 293 DCGSYHTLA-------YVHTTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAE 341
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 135/291 (46%), Gaps = 15/291 (5%)
Query: 263 PLEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
P EA +I V S + VT EV+ +G+ LG G+ S PK + L G
Sbjct: 15 PQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA-LCG 73
Query: 322 KRVTQVSAGHS-HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAV 377
K++ +S G H TEDG++Y WG + +LG+G P V + V V
Sbjct: 74 KKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEV 133
Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP-KVIEALRKFRVRKVCAGTSF 436
+CG H++ L+ DG +++ G N G++G T TP KV L RV + G +
Sbjct: 134 ACGSHHSMALAADGE-LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTS 192
Query: 437 SVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQY 490
S+A+ G V+ WG LGL ++ TPV V L + + G +H LAL+
Sbjct: 193 SMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-TPVRVAALHGMCVNQIVCGYAHTLALTDE 251
Query: 491 NEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT 541
+YAWG+NT GQ G + +N + +V E V C + S A T
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKT 302
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 248 LGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
LG + +PK++ S+S S HVL T +G VY+WG + +LG+G T
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
P + L K+V +V+ G HS A+ DG L+ WG + G++G G ++ TP
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRK 173
Query: 368 VTEL---SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRK 424
VT V ++CG++ ++ + G V+ G G+LG + G TP + AL
Sbjct: 174 VTNCLHTKRVVNIACGQTSSMAVLDSGE-VYGWGYNGNGQLGLGNNGNQLTPVRVAALHG 232
Query: 425 FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVS 478
V ++ G + ++ALT +GL++ WG LG S + + +P + + ++++++
Sbjct: 233 MCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKN-NLLSPTQIM-VEKERVIEIA 290
Query: 479 IGDS-HV-LALSQYNEVYAWG 497
S H A +Q VY WG
Sbjct: 291 ACHSTHTSAAKTQGGHVYMWG 311
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 244 GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH 303
G LG T P +V I + C H + + ++GE+++WG G++G
Sbjct: 103 GYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGS 162
Query: 304 GNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRH 363
G+T +Q P+ + L+ KRV ++ G + S AV + G +Y WG +G+LG G+ ++
Sbjct: 163 GSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL 222
Query: 364 TPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
TP V L V + CG +HTL L+ +G +++ G+ G+LG + +P I
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEG-LLYAWGANTYGQLGTGSKNNLLSPTQI-M 280
Query: 422 LRKFRVRKV--CAGTSFSVALTWDGLVFWWG 450
+ K RV ++ C T S A T G V+ WG
Sbjct: 281 VEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 185 VAHSKVYTWGCNLHHQILDEVRGKCSRPRLQS---LPSNIRHIEAGQFCTFLLDSTG--- 238
A +++ WG N Q+ PR + + +I GQ + + +G
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 239 GLLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVG 296
G G G LGL N Q P RV AA+ + V++ C AH L +T EG +Y+WG
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPVRV---AALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 297 EHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
+G+LG G+ + P IM + +RV +++A HS SAA T+ G +Y WG+
Sbjct: 261 TYGQLGTGSKNNLLSPTQIM--VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 16/264 (6%)
Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
G LG+ + P+R+ S+S S H++ T++GEV++WG + +LG+G
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135
Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
T P I L K+V +V+ G HS +T DG ++ WG + G++G G ++ P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 195
Query: 366 TLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
VT + V +++CG+ ++ + G V+ G G+LG +G TP + AL
Sbjct: 196 RRVTGCLQNKVVMSIACGQMCSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTPCRVAAL 254
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-RSSSISFHTPVLVTGLSSHQIV 475
+ RV++V G + ++ LT +G ++ WG LG S+ S+ TPV+V +I+
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV---EKDRII 311
Query: 476 DVSIGDSH--VLALSQYNEVYAWG 497
+++ S A SQ VY WG
Sbjct: 312 EIAACHSAHTSAAKSQGGHVYMWG 335
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 15/255 (5%)
Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
VL T E++ G G LG G+ S P+ + L GK++ +S G H T
Sbjct: 58 VLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRR-LDSLTGKKIASLSYGSGPHIVLATT 116
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELSD--VGAVSCGESHTLVLSQDGHTVWS 396
DG ++TWG + +LG+G P + T LS+ V V+CG H+LVL+ DG V++
Sbjct: 117 DGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE-VFA 175
Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
G N G++G T P+ V L+ V + G S+A+ G V+ WG
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
LGL SS + TP V L ++ V+ G +H L L+ ++YAWG+N+ GQ G N
Sbjct: 236 QLGLGSSG-NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 510 SNPVDQPSKVVGLED 524
SN P+ VV +D
Sbjct: 295 SNQ-SYPTPVVVEKD 308
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 43/352 (12%)
Query: 79 LRQTVTSTSPKADKTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACL 138
+ + V ++ K+VQ++L S L P + + ++ LIR AC+
Sbjct: 1 MEEEVPGFYGESGKSVQATLSSLKMLDVGKWP----------IFSLCSEEELQLIRQACV 50
Query: 139 VYL----ILVTLADDNIKPLGDRKSSNSNT-DIDSTSTPK------------LTYNIG-D 180
+L T +D I LG S DI ST P+ L+Y G
Sbjct: 51 FGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPH 110
Query: 181 TDISVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIE--AGQFCTFLLDST 237
++ +V+TWG N + Q+ + P + + SN + IE G + + +L S
Sbjct: 111 IVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 238 GGLLVYG---KGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
G + +G G +G +T QP+P+RV L+ +V +S++ C + + V GEVY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV-MSIA-CGQMCSMAVVDTGEVYV 228
Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
WG +G+LG G++ +Q P + L G RV +V+ G++H+ +T++G +Y WG +G
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHT-LVLSQDGHT-VWSMGSG 400
+LG G+ ++ PT V D + +C +HT SQ GH +W G
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRG 339
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 156/355 (43%), Gaps = 48/355 (13%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY-----G 244
VYTWG + + RL L + + + G+ + +G L+ + G
Sbjct: 322 VYTWGSGISTPL-----------RLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVG 370
Query: 245 KGWLGLANTTIQPLPKRVP--LEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKL 301
G L Q P+ + LE + V++ C + +T G + ++G G +G L
Sbjct: 371 SGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCL 430
Query: 302 GHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
GHGN +PK++ L G + QVS G SH AVT + +++WG GD+GRLG S
Sbjct: 431 GHGNFNDVTQPKIVEA-LLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDS 489
Query: 362 RHTPTLVTELSDVGA--VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKV- 418
+ P V+ +D A V CG ++++S H + + G+ KLG + P
Sbjct: 490 HNCPQQVSLPADFEAQRVLCGVDCSMIMSTQ-HQILACGNNRFNKLGLDKVSGTEEPSSF 548
Query: 419 --IEALRKF-----------RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSIS 459
+E + F ++ + GT+ SVA+T G F +G LG S S
Sbjct: 549 CQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGC-SHRRS 607
Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG--QDNFSNP 512
P V+GL I + GD+ LA+ EVY WG G+ G +++F P
Sbjct: 608 SRVPYQVSGLQG--ITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIP 660
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 40/311 (12%)
Query: 259 PKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG-----NTLSQRRP 312
P R+P L ++ +S+ + + + VT G + +W E +G G + Q +P
Sbjct: 332 PLRLPMLNTEVIQVSLGRTQK---MGVTKSGRLITW---EAPSVGSGEPTLPGAVEQMQP 385
Query: 313 KLI---MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
+ I + G G + VS G + +T+ G++ T+G G +G LGHG+ P +V
Sbjct: 386 QFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVE 445
Query: 370 EL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRV 427
L ++ VSCG SH L ++ + V+S G G+ G+LG P+ + F
Sbjct: 446 ALLGYELVQVSCGASHVLAVTNE-REVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEA 504
Query: 428 RKVCAGTSFSVALTWDGLVFWWG------LGLRSSS-------------ISFHTPVLVTG 468
++V G S+ ++ + G LGL S + V
Sbjct: 505 QRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAP 564
Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
L++ +IV + IG +H +A+++ + + +GSN GQ G + + P +V GL+ + +
Sbjct: 565 LNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSS-RVPYQVSGLQGITM- 622
Query: 529 QICAGSLFSIA 539
G F++A
Sbjct: 623 -AACGDAFTLA 632
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 37/258 (14%)
Query: 290 VYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG 349
VY+WG G L R P L V QVS G + VT+ G L TW
Sbjct: 322 VYTWGSGISTPL--------RLPML------NTEVIQVSLGRTQKMGVTKSGRLITW--- 364
Query: 350 DHGRLGHGD-----LKSRHTPTLVTELSD------VGAVSCGESHTLVLSQDGHTVWSMG 398
+ +G G+ + P ++ + + +VSCG+ T L+ G + + G
Sbjct: 365 EAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRG-IIMTFG 423
Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LG 452
SG+ G LGH + VT PK++EAL + + +V G S +A+T + VF WG LG
Sbjct: 424 SGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLG 483
Query: 453 LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
L + S + P V+ + + V G + +S +++ A G+N + G D S
Sbjct: 484 LATQD-SHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSG- 541
Query: 513 VDQPSKVVGLEDVCVRQI 530
++PS +E+V + Q+
Sbjct: 542 TEEPSSFCQVEEVHLFQL 559
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
G LGLA P++V L A + V C + ++++ ++ + G KLG
Sbjct: 480 GRLGLATQDSHNCPQQVSLPADFEAQRV-LCGVDCSMIMSTQHQILACGNNRFNKLGLDK 538
Query: 306 TLSQRRP------------KLIMGG-LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
P +L+ L +++ + G +HS AVTE G +T+G HG
Sbjct: 539 VSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHG 598
Query: 353 RLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGH--EDT 410
+LG +S P V+ L + +CG++ TL + +G V++ G G G+LG ED
Sbjct: 599 QLGCSHRRSSRVPYQVSGLQGITMAACGDAFTLAIGAEGE-VYTWGKGARGRLGRKEEDF 657
Query: 411 GKVTTPKVIEALRKFRVRKV--CAGTSF 436
G + P ++ F V V C G +
Sbjct: 658 G-IPKPVQLDESHAFTVTSVACCHGNTL 684
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 118/300 (39%), Gaps = 35/300 (11%)
Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS 277
I+ + G T L G ++ +G G LG N PK V + VS C
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVS-CG 458
Query: 278 EAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIM--GGLYGKRVTQVSAGHSHSA 335
+HVL VT+E EV+SWG G++G+LG S P+ + +RV G S
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVL---CGVDCSM 515
Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGA----------------VSC 379
++ + G +LG + P+ ++ +V +
Sbjct: 516 IMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDI 575
Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
G +H++ +++ G ++ GS G+LG P + L+ + G +F++A
Sbjct: 576 GTAHSVAVTEKGQ-CFTFGSNQHGQLGCSHRRSSRVPYQVSGLQG--ITMAACGDAFTLA 632
Query: 440 LTWDGLVFWWGLGLRS----SSISFHTPVLVTGLSSHQIVDVSIGDSH---VLALSQYNE 492
+ +G V+ WG G R F P V SH S+ H +LA+ + E
Sbjct: 633 IGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVACCHGNTLLAVKPFFE 692
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 16/264 (6%)
Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
G LGL + P+R+ +S S H++ T+EGEV++WG + +LG+G
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135
Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
T P I L K+V +V+ G HS +T DG ++ WG + G++G G ++ P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195
Query: 366 TLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
VT + V ++CG+ + + G V+ G G+LG ++G TP + AL
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTPCRVAAL 254
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-RSSSISFHTPVLVTGLSSHQIV 475
+ RV++V G + ++ LT +G V+ WG LG S+ S+ TPV V +I+
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV---EKDRII 311
Query: 476 DVSIGDS-HV-LALSQYNEVYAWG 497
+++ S H A +Q VY WG
Sbjct: 312 EIAACHSTHTSAAKTQGGHVYMWG 335
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 33/299 (11%)
Query: 129 QVDLIRSACLV----YLILVTLADDNIK----------PLGDRKSSNSNTDIDSTSTPK- 173
++ LIR AC+ +L T +D I LGD +S+ +DS + K
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI 100
Query: 174 --LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIE--AG 227
L+Y G ++ +V+TWG N + Q+ + P + + SN + IE G
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACG 160
Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP---LEAAIVSLSVSKCSEAHV 281
+ + +L S G + +G G +G +T QP+P+RV +V+++ C +
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIA---CGQMCC 217
Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
+ V GEVY WG +G+LG GN+ +Q P + L G RV +V+ G++H+ +T++G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEG 276
Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
+Y WG +G+LG G+ ++ PT VT D + +C +HT G V+ G
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
VL T E++ G G LG G+ S P+ + L GK++ +S G H T
Sbjct: 58 VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR-LDSLNGKKIACLSYGSGPHIVLATT 116
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELSD--VGAVSCGESHTLVLSQDGHTVWS 396
+G ++TWG + +LG+G P + T LS+ V V+CG H+LVL+ DG V++
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE-VFA 175
Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
G N G++G T P+ V L+ V + G +A+ G V+ WG
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
LGL +S + TP V L ++ V+ G +H L L+ +VYAWG+N+ GQ G N
Sbjct: 236 QLGLGNSG-NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 510 SN 511
SN
Sbjct: 295 SN 296
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSE 278
I GQ C + TG + V+G G LGL N+ QP P RV AA+ + V + C
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV---AALQGIRVQRVACGY 266
Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS--HSAA 336
AH L +T EG+VY+WG +G+LG GN +Q P + + R+ +++A HS SAA
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT--VEKDRIIEIAACHSTHTSAA 324
Query: 337 VTEDGLLYTWGE 348
T+ G +Y WG+
Sbjct: 325 KTQGGHVYMWGQ 336
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 16/264 (6%)
Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
G LGL + P+R+ +S S H++ T+EGEV++WG + +LG+G
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 135
Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
T P I L K+V +V+ G HS +T DG ++ WG + G++G G ++ P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIP 195
Query: 366 TLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
VT + V ++CG+ + + G V+ G G+LG ++G TP + AL
Sbjct: 196 RRVTGCLQNKVVVTIACGQMCCMAVVDTGE-VYVWGYNGNGQLGLGNSGNQPTPCRVAAL 254
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-RSSSISFHTPVLVTGLSSHQIV 475
+ RV++V G + ++ LT +G V+ WG LG S+ S+ TPV V +I+
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV---EKDRII 311
Query: 476 DVSIGDS-HV-LALSQYNEVYAWG 497
+++ S H A +Q VY WG
Sbjct: 312 EIAACHSTHTSAAKTQGGHVYMWG 335
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 144/299 (48%), Gaps = 33/299 (11%)
Query: 129 QVDLIRSACLV----YLILVTLADDNIK----------PLGDRKSSNSNTDIDSTSTPK- 173
++ LIR AC+ +L T +D I LGD +S+ +DS + K
Sbjct: 41 ELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI 100
Query: 174 --LTYNIG-DTDISVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIE--AG 227
L+Y G ++ +V+TWG N + Q+ + P + + SN + IE G
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACG 160
Query: 228 QFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVP---LEAAIVSLSVSKCSEAHV 281
+ + +L S G + +G G +G +T QP+P+RV +V+++ C +
Sbjct: 161 SYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIA---CGQMCC 217
Query: 282 LTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
+ V GEVY WG +G+LG GN+ +Q P + L G RV +V+ G++H+ +T++G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEG 276
Query: 342 LLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
+Y WG +G+LG G+ ++ PT VT D + +C +HT G V+ G
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 14/242 (5%)
Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
VL T E++ G G LG G+ S P+ + L GK++ +S G H T
Sbjct: 58 VLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR-LDSLNGKKIACLSYGSGPHIVLATT 116
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELSD--VGAVSCGESHTLVLSQDGHTVWS 396
+G ++TWG + +LG+G P + T LS+ V V+CG H+LVL+ DG V++
Sbjct: 117 EGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE-VFA 175
Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
G N G++G T P+ V L+ V + G +A+ G V+ WG
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
LGL +S + TP V L ++ V+ G +H L L+ +VYAWG+N+ GQ G N
Sbjct: 236 QLGLGNSG-NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294
Query: 510 SN 511
SN
Sbjct: 295 SN 296
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 224 IEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSE 278
I GQ C + TG + V+G G LGL N+ QP P RV AA+ + V + C
Sbjct: 210 IACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRV---AALQGIRVQRVACGY 266
Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS--HSAA 336
AH L +T EG+VY+WG +G+LG GN +Q P + + R+ +++A HS SAA
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT--VEKDRIIEIAACHSTHTSAA 324
Query: 337 VTEDGLLYTWGE 348
T+ G +Y WG+
Sbjct: 325 KTQGGHVYMWGQ 336
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 15/255 (5%)
Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS-HSAAVTE 339
VL T E++ G G LG G+ S P+ + L GK++ +S G H T
Sbjct: 58 VLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRR-LDSLTGKKIASLSYGSGPHIVLATT 116
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELSD--VGAVSCGESHTLVLSQDGHTVWS 396
DG ++TWG + +LG+G P + T LS+ V V+CG H+LVL+ DG V++
Sbjct: 117 DGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE-VFA 175
Query: 397 MGSGNLGKLGHEDTGKVTTPK-VIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
G N G++G T P+ V L+ V + G S+A+ G V+ WG
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 451 -LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNF 509
LGL SS + TP V L ++ V+ G +H L L+ ++YAWG+N+ GQ G N
Sbjct: 236 QLGLGSSG-NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 510 SNPVDQPSKVVGLED 524
SN P+ VV +D
Sbjct: 295 SNQ-SYPTPVVVEKD 308
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 16/264 (6%)
Query: 246 GWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN 305
G LG+ + P+R+ S+S S H++ T++GEV++WG + +LG+G
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGT 135
Query: 306 TLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTP 365
T P I L K+V +V+ G HS +T DG ++ WG + G++G G ++ P
Sbjct: 136 TNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIP 195
Query: 366 TLVT---ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
VT + V ++CG+ ++ + G V+ G G+LG +G TP + AL
Sbjct: 196 RRVTGCLQNKVVMNIACGQMCSMAVVDTGE-VYVWGYNGNGQLGLGSSGNQPTPCRVAAL 254
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-RSSSISFHTPVLVTGLSSHQIV 475
+ RV++V G + ++ LT +G ++ WG LG S+ S+ TPV+V +I+
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVV---EKDRII 311
Query: 476 DVSIGDS-HV-LALSQYNEVYAWG 497
+++ S H A +Q VY WG
Sbjct: 312 EIAACHSAHTSAAKTQGGHVYMWG 335
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 161/348 (46%), Gaps = 41/348 (11%)
Query: 79 LRQTVTSTSPKADKTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACL 138
+ + V ++ K+VQ++L S L P + + ++ LIR AC+
Sbjct: 1 MEEEVPGFYGESGKSVQATLSSLKMLDVGKWP----------IFSLCSEEELQLIRQACV 50
Query: 139 V----YLILVTLADDNIKPLGDRKSSNSNT-DIDSTSTPK------------LTYNIG-D 180
+L T +D I LG S DI ST P+ L+Y G
Sbjct: 51 FGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPH 110
Query: 181 TDISVAHSKVYTWGCNLHHQILDEVRGKCSRP-RLQSLPSNIRHIE--AGQFCTFLLDST 237
++ +V+TWG N + Q+ + P + + SN + IE G + + +L S
Sbjct: 111 IVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 238 GGLLVYG---KGWLGLANTTIQPLPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYS 292
G + +G G +G +T QP+P+RV L+ +V ++++ C + + V GEVY
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV-MNIA-CGQMCSMAVVDTGEVYV 228
Query: 293 WGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
WG +G+LG G++ +Q P + L G RV +V+ G++H+ +T++G +Y WG +G
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 353 RLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMG 398
+LG G+ ++ PT V D + +C +HT G V+ G
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 19/172 (11%)
Query: 189 KVYTWGCNLHHQILDEVRGKCSRPR-----LQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
+V+ WG N Q+ PR LQ+ + +I GQ C+ + TG + V+
Sbjct: 172 EVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQN--KVVMNIACGQMCSMAVVDTGEVYVW 229
Query: 244 ---GKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEH 298
G G LGL ++ QP P RV AA+ + V + C AH L +T EG++Y+WG +
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRV---AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSY 286
Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSH--SAAVTEDGLLYTWGE 348
G+LG GN +Q P ++ + R+ +++A HS SAA T+ G +Y WG+
Sbjct: 287 GQLGTGNKSNQSYPTPVV--VEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 336
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 223 HIEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSE 278
H+ G + ++ L ++G G LGL + + P V L+ V L+ C
Sbjct: 39 HLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAA--CGR 96
Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
H L T G VY+ G G+LG G+T + +I ++ Q+SAG + SAA+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 339 EDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMG 398
EDG L+ WG+ G++G ++ + P VT V +SCG H+ ++ DG ++ G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGE-LYVFG 215
Query: 399 SGNLGKLG--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG---- 452
GKLG ++ G TP+++ + + +V +V G +V LT + V+ +GLG
Sbjct: 216 EPENGKLGLPNQLLGNHRTPQLVSEIPE-KVIQVACGGEHTVVLT-ENAVYTFGLGQFGQ 273
Query: 453 LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDN 508
L + F T P ++ + I +S G++H ++ +Y +G G+ G +N
Sbjct: 274 LGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Query: 509 FSN 511
F+N
Sbjct: 334 FTN 336
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 189 KVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK-- 245
+++ WG N QI L V C P+ ++ + I G + + + + G L V+G+
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCV-PQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPE 218
Query: 246 -GWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHGKLG 302
G LGL N + R P + + V + C H + +T E VY++G+G+ G+LG
Sbjct: 219 NGKLGLPNQLLGN--HRTPQLVSEIPEKVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLG 275
Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLK 360
G L + ++ + + ++ +S G +H+A +T+ GL+YT+G+G HG+LG G +
Sbjct: 276 LGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFT 335
Query: 361 SRHTPTLVTELSD--VGAVSCGESHTLVLS 388
+ PTL + V V+CG H +V +
Sbjct: 336 NHFIPTLCSNFLRFIVKLVACGGCHMVVFA 365
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 45/363 (12%)
Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
S VY WG L + RL L + + + AG+ + +G L+++
Sbjct: 312 SSVYAWGGGLGTPL-----------RLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPP 360
Query: 248 LGLANTTI------QPLPKRVP--LEA-AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
LG ++ QP P+ + LE + V++ C + +T G + ++G G +
Sbjct: 361 LGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSN 420
Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
G LGHG+ +P ++ L G + QV+ G SH A++ + L+ WG GD GRLG G
Sbjct: 421 GCLGHGSLTDISQPTIVEA-LLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGT 479
Query: 359 LKSRHTPTLV--TELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--HEDTGKVT 414
+S P V + V CG +++L+ G + + GS KLG H G+
Sbjct: 480 RESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQAL-ACGSNRFNKLGLDHLSLGEEP 538
Query: 415 TP--KVIEALR----------KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
P +V EAL + + + GT+ S A+T G + +G LG +
Sbjct: 539 VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTR 598
Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
S P V GL ++ V+ GD+ +A+ +EVY+WG G+ G+ + + +P
Sbjct: 599 RGS-RAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRP 657
Query: 517 SKV 519
++
Sbjct: 658 VQL 660
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 138/313 (44%), Gaps = 41/313 (13%)
Query: 259 PKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGN------TLSQRR 311
P R+P L +V ++ + +A VT G + W E LG G + Q +
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKA---GVTRSGRLILW---EAPPLGAGGGSLLPGAVEQPQ 377
Query: 312 PKLI---MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV 368
P+ I + G G + V+ G +A +T+ G++ T+G G +G LGHG L PT+V
Sbjct: 378 PQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIV 437
Query: 369 TEL--SDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR 426
L ++ V+CG SH L LS + +++ G G+ G+LG + P+ +
Sbjct: 438 EALLGYEMVQVACGASHVLALSTE-RELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQE 496
Query: 427 VRKVCAGTSFSVALTWDGLVFWWG------LGLR--------------SSSISFHTPVLV 466
++V G S+ LT G G LGL ++SF T +
Sbjct: 497 AQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSF-TLLGS 555
Query: 467 TGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVC 526
L ++ + +G +H A++ + Y +GSN GQ G N P KV GLE +
Sbjct: 556 APLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLG-TNTRRGSRAPCKVQGLEGIK 614
Query: 527 VRQICAGSLFSIA 539
+ + G F++A
Sbjct: 615 MAMVACGDAFTVA 627
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
AH VT+ G+ Y++G +HG+LG R P + G L G ++ V+ G + + A+
Sbjct: 571 AHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIG 629
Query: 339 EDGLLYTWGEGDHGRLGHGDLKS---RHTPTLVTELSDVGAVSCGESHTLV 386
+ +Y+WG+G GRLG D + R T V +VSC +TL+
Sbjct: 630 AESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLL 680
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 33/306 (10%)
Query: 227 GQFCTFLLDSTGGLLVYGK---GWLGLAN-------TTIQPL-PKRVPLEAAIVSLSVSK 275
G T ++ L ++G G LGL + T I+ L P++V L A
Sbjct: 43 GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAA--------- 93
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
C H L T G VY+ G G+LG G+T + I+ + Q+SAG + SA
Sbjct: 94 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
A+TEDG L+ WG+ G++G D + P VT + +SCG H+ ++ DG ++
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGE-LY 212
Query: 396 SMGSGNLGKLG--HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG- 452
+ G GKLG +E +P+ + + + RV +V G +V LT + +V+ +GLG
Sbjct: 213 TFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLT-EKVVYAFGLGQ 270
Query: 453 ---LRSSSISFHT--PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CG 505
L + F T P ++ + +I +S G++H +++ +Y +G G+ G
Sbjct: 271 FGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 330
Query: 506 QDNFSN 511
+NF+N
Sbjct: 331 MENFTN 336
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGK--- 245
K++ WG N QI E + P ++ I I G + + + G L +G+
Sbjct: 160 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPEN 219
Query: 246 GWLGLANTTI--QPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG 302
G LGL N + P+RV + ++ ++ C H + +T E VY++G+G+ G+LG
Sbjct: 220 GKLGLPNELLMNHRSPQRVLGIPERVIQVA---CGGGHTVVLT-EKVVYAFGLGQFGQLG 275
Query: 303 HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG--DLK 360
G L + I+ + +++ +S G +H+A +TE GLLYT+G+G HG+LG G +
Sbjct: 276 LGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFT 335
Query: 361 SRHTPTLVTEL--SDVGAVSCGESHTLVLS 388
++ PTL + V ++CG H LV +
Sbjct: 336 NQFFPTLCSNFLRFAVQLIACGGCHMLVFA 365
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 172/421 (40%), Gaps = 92/421 (21%)
Query: 164 TDIDSTSTPKLTYNIGDTDISVAHSKVYTWG--------CNLHHQILDEVRGKCSRPRLQ 215
T+ D++ PKL + D D + + WG CN+ E+ +
Sbjct: 137 TNFDTSLIPKLGHE--DKDELESDHYITIWGNGIRNYKNCNMSSIGFSEMYNQ------- 187
Query: 216 SLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGL---ANTTIQPLPKRVPLEAAIVSLS 272
I I G + + G L +G G LG N PK V SL
Sbjct: 188 ---QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLR 244
Query: 273 VSKCSEA--HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRR---PKLIMGGL-------- 319
V + H L +T G+VYSWG + +LG GN S P+LI +
Sbjct: 245 VVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNN 304
Query: 320 -------------------------------YGKRVTQVSAGHSHSAAVTEDGLLYTWGE 348
++ ++S G + SA +T+ GLL+T+G
Sbjct: 305 NNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGR 364
Query: 349 GDHGRLGHGD--LKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSGNLGK 404
GDHGRLG G+ L + TP LV L + +S G H+LVL+ G V+S G + G+
Sbjct: 365 GDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKG-LVFSFGRNDQGQ 423
Query: 405 LGHE-DTGKVTTPKVIEALRK--------FRVRKVCAGTSFSVALTWDGLVFWWG---LG 452
LG + + T PK I+ + + KV AG S+A++ + + WG G
Sbjct: 424 LGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYG 483
Query: 453 LRSSSISF----HTPVLVTG----LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQC 504
+ +SI + PVL+ + + + +DVS G H +A+S +Y+WG N +
Sbjct: 484 VLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRL 543
Query: 505 G 505
G
Sbjct: 544 G 544
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 56/253 (22%)
Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD-----VGA 376
+++ +S G HS+ +T+ G LYT+G+G G+LGHG+L+S +P LV V +
Sbjct: 188 QKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVS 247
Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHED---TGKVTTPKVIE------------- 420
++ G H+L L+ G V+S G + +LG + + + P++I
Sbjct: 248 IANGGKHSLALTICGK-VYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 421 ---------------------------ALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
K ++ K+ GT+ S +T GL+F +G
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 451 ---LGLRSSSISFH-TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQ 506
LGL S+ TP LV L H I+D+S G H L L+ V+++G N GQ G
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGI 426
Query: 507 DNFSNPVDQPSKV 519
FSN P ++
Sbjct: 427 GCFSNQQTIPKQI 439
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 29/134 (21%)
Query: 404 KLGHEDTGKVTTPKVI---------------------EALRKFRVRKVCAGTSFSVALTW 442
KLGHED ++ + I E + ++ + G S +T
Sbjct: 146 KLGHEDKDELESDHYITIWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITD 205
Query: 443 DGLVFWWGLGL-----RSSSISFHTPVLVTGLSSH---QIVDVSIGDSHVLALSQYNEVY 494
G ++ +G GL + S+ +P LV + ++V ++ G H LAL+ +VY
Sbjct: 206 QGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVY 265
Query: 495 AWGSNTMGQCGQDN 508
+WG N Q G N
Sbjct: 266 SWGGNDSCQLGLGN 279
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 41/325 (12%)
Query: 252 NTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGE--HGKLGHGNTL 307
N ++ P +V E A+ L V+K CS+ +T G ++WG G LG+ +
Sbjct: 157 NDLLEGTPSKV--EGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSD-- 212
Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
SQ+R + + Q++ G H A+T G +YTWG G +LG L+ R L
Sbjct: 213 SQKRTAEPTQ-MRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGL 271
Query: 368 VTE---LSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-----HEDTGKVTTPKVI 419
+ L ++ +V G H+ + G V++ G + G E+ +T P ++
Sbjct: 272 TPQPLALKNIISVGAGSYHSFAIDNKGR-VYAWGLNITRQCGIEVEDEEEGAVITKPTLV 330
Query: 420 EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGL-------------RSSSISF 460
+AL + V+ + G ++AL DG V WG LG+ + ++
Sbjct: 331 DALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYL 390
Query: 461 HTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPS--K 518
TP ++ GL++ ++ V G H LA++ +VY+WGS + GQ + V P+ +
Sbjct: 391 STPTIIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVR 448
Query: 519 VVGLEDVCVRQICAGSLFSIAYTVP 543
+++V +R AG FSI +P
Sbjct: 449 SKAIKEVAIRVAGAGGQFSIIAGIP 473
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 36/270 (13%)
Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGH-------------GNTLSQRR 311
+ +V L+V H ++ +G VY+WGV + LG N L +
Sbjct: 107 KVGVVDLAVGGM---HSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGT 163
Query: 312 PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLGHGDLKSRHTPTLVT 369
P + G L RVT+V + +AA+T++G +TWG G LG+ D + R
Sbjct: 164 PSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQM 223
Query: 370 ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT----TPKVIEALRKF 425
L ++ ++ G H + L+ G V++ G+G +LG + TP+ + AL+
Sbjct: 224 RLPEICQLATGTDHIIALTTTGK-VYTWGNGQQFQLGRRMLERRRLQGLTPQPL-ALKN- 280
Query: 426 RVRKVCAGTSFSVALTWDGLVFWWGLGL-RSSSISFH---------TPVLVTGLSSHQIV 475
+ V AG+ S A+ G V+ WGL + R I P LV L + +
Sbjct: 281 -IISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 476 DVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
++ G+ H LAL + V AWG + Q G
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLG 369
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 141/332 (42%), Gaps = 67/332 (20%)
Query: 175 TYNIGDTDISVA--HS-------KVYTWGCN-------LHHQILDEVRGKCSRPRLQSLP 218
T +G D++V HS +VYTWG N L DE K L+ P
Sbjct: 105 TDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTP 164
Query: 219 SNIR----HIEAGQ-FC----TFLLDSTGGLLVYG-----KGWLGLANT---TIQPLPKR 261
S + H+ + C T + G +G G LG +++ T +P R
Sbjct: 165 SKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMR 224
Query: 262 VPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYG 321
+P I L+ H++ +T+ G+VY+WG G+ +LG +R L L
Sbjct: 225 LP---EICQLATGT---DHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLAL 278
Query: 322 KRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG-------HGDLKSRHTPTLVTELS-- 372
K + V AG HS A+ G +Y WG + G G + ++ PTLV L
Sbjct: 279 KNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITK--PTLVDALEGY 336
Query: 373 DVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTG--------------KVTTPKV 418
+V +++ GE HTL L +DG V + G + +LG D ++TP +
Sbjct: 337 NVKSITGGEHHTLALLEDGR-VLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTI 395
Query: 419 IEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
I L V +V GT ++A+T DG V+ WG
Sbjct: 396 IPGL--TNVIQVVCGTHHNLAVTSDGKVYSWG 425
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 136/338 (40%), Gaps = 56/338 (16%)
Query: 240 LLVYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
++ GK + A + P P RVP A ++K E T VY +G G
Sbjct: 31 VMKNGKKPVKRAKVSSLPKPVRVPGSAK----RINKIPELP----TERLNVYVFGSGSMN 82
Query: 300 KLGHGNTLSQ--RRPKL---IMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRL 354
+LG G RP+L + G V ++ G HSAA++ DG +YTWG D L
Sbjct: 83 ELGMGEEEMDVVYRPRLNPILSTDKVG--VVDLAVGGMHSAALSHDGRVYTWGVNDDYAL 140
Query: 355 GH--GDLKSRHTPTLVTELSD--------------VGAVSCGESHTLVLSQDGHT-VWSM 397
G D K + + +L + V V C ++ T ++ +G W
Sbjct: 141 GRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGT 200
Query: 398 GSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVC---AGTSFSVALTWDGLVFWWGLG-- 452
+ G LG+ D+ K T + R+ ++C GT +ALT G V+ WG G
Sbjct: 201 FRCSDGVLGYSDSQKRTAEPT-----QMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQ 255
Query: 453 -------LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
L + TP L+ I+ V G H A+ VYAWG N QCG
Sbjct: 256 FQLGRRMLERRRLQGLTP---QPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCG 312
Query: 506 ---QDNFSNPV-DQPSKVVGLEDVCVRQICAGSLFSIA 539
+D V +P+ V LE V+ I G ++A
Sbjct: 313 IEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLA 350
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 34/208 (16%)
Query: 189 KVYTWGCNLHHQILDEVRGKCSRPRLQSLP------SNIRHIEAGQFCTFLLDSTGGLLV 242
KVYTWG Q+ R R RLQ L NI + AG + +F +D+ G +
Sbjct: 246 KVYTWGNGQQFQL---GRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYA 302
Query: 243 YG-----KGWLGLANTTIQPLPKRVPLEAAIVSLSVSKCS--EAHVLTVTSEGEVYSWGV 295
+G + + + + + + L A+ +V + E H L + +G V +WG
Sbjct: 303 WGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGR 362
Query: 296 GEHGKLG--------------HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDG 341
+ +LG GN P +I G V QV G H+ AVT DG
Sbjct: 363 DDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLT---NVIQVVCGTHHNLAVTSDG 419
Query: 342 LLYTWGEGDHGRLGHGDLKSR-HTPTLV 368
+Y+WG ++ +G GD PTLV
Sbjct: 420 KVYSWGSAENYEVGQGDNDEDVAVPTLV 447
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 35/260 (13%)
Query: 280 HVLTVTSEGEVYSW-----GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
H VT E E+Y+W G HG+LGHG+ S R+PK + L GK + QVS G +
Sbjct: 380 HFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEK-LQGKAIRQVSCGDDFT 438
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-------SDVGAVSCGESHTLVL 387
VT++G LY +G +G +G + P ++ + + V VSCG++H +VL
Sbjct: 439 VCVTDEGQLYAFGSDYYGCMG---VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVL 495
Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
+++ V+S G G G+LG + TP+ ++ + + V G + LT G V
Sbjct: 496 TRN-KEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVL 554
Query: 448 WWG------LGLRS--SSISFHTP----------VLVTGLSSHQIVDVSIGDSHVLALSQ 489
G LGL S I H L LS ++I ++ G +H A+ +
Sbjct: 555 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 490 YNEVYAWGSNTMGQCGQDNF 509
+ +G N GQ G N+
Sbjct: 615 RGRLLTFGCNKCGQLGVGNY 634
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 152/342 (44%), Gaps = 33/342 (9%)
Query: 188 SKVYTWGCNLHH-QILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
S+VY WG Q LD ++ CS ++ + ++ + + ++ GG ++G+
Sbjct: 347 SEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ- 405
Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
LG + PK V VS C + + VT EG++Y++G +G +G
Sbjct: 406 -LGHGDKASYRQPKHVEKLQGKAIRQVS-CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKV 463
Query: 307 LSQRRPKLI----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
P+++ + V QVS G +H +T + +Y+WG G++GRLG +
Sbjct: 464 AG---PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY 520
Query: 363 HTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG----------HEDT 410
+TP V + + AV CG T +L+Q G V + G KLG HE
Sbjct: 521 YTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK-VLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 411 GKV---TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
+V T+ + + L +++R + G + + A+ G + +G LG+ +
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
+L L Q++ VS GD +A + N ++AWG+ G+
Sbjct: 640 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGR 681
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 36/251 (14%)
Query: 274 SKCSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
S +EA + VTS EVY WG G+ + ++ +I G + QV AG++
Sbjct: 332 STVTEAPIAVVTSRTSEVYVWGGGKS---------TPQKLDVIKSGCSAR---QVCAGNT 379
Query: 333 HSAAVTEDGLLYTW-----GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
H A VT + LYTW G HG+LGHGD S P V +L + VSCG+ T+
Sbjct: 380 HFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTV 439
Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR-----KFRVRKVCAGTSFSVAL 440
++ +G +++ GS G +G + KV P+V+E ++ V +V G + V L
Sbjct: 440 CVTDEGQ-LYAFGSDYYGCMGVD---KVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVL 495
Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
T + V+ WG LGL S ++TP V + IV V G L+Q +V
Sbjct: 496 TRNKEVYSWGCGEYGRLGLDSEE-DYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVL 554
Query: 495 AWGSNTMGQCG 505
A G N + G
Sbjct: 555 ACGLNEFNKLG 565
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 38/265 (14%)
Query: 170 STPKLTYNIGDTDISV--AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIE 225
S P + GD + V + +VY+WGC + ++ + P+ +P I ++
Sbjct: 479 SNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQ 538
Query: 226 AGQFCTFLLDSTGGLLVYG----------KGWLGLAN---------TTIQPLPKRVPLEA 266
G TFLL +G +L G + G+ N TT L K++
Sbjct: 539 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF-Y 597
Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
I +++ K H + G + ++G + G+LG GN + L+ G L GK+V +
Sbjct: 598 KIRTIAPGK---THTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654
Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--------ELSDVGAVS 378
VS G + A T+D ++ WG G +GRL + H + T L V +S
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLS 714
Query: 379 CGESHTLVLSQ---DGHTVWSMGSG 400
C HT+++ + + T+ S SG
Sbjct: 715 CRGWHTILIVEKVLNSKTIRSNSSG 739
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 120/262 (45%), Gaps = 35/262 (13%)
Query: 280 HVLTVTSEGEVYSW-----GVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHS 334
H VT E E+Y+W G HG+LGHG+ S R+PK + L GK + QVS G +
Sbjct: 380 HFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEK-LQGKAIHQVSCGDDFT 438
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL-------SDVGAVSCGESHTLVL 387
VT++G LY +G +G +G + P ++ + + V VSCG++H +VL
Sbjct: 439 VCVTDEGQLYAFGSDYYGCMG---VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVL 495
Query: 388 SQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVF 447
+++ V+S G G G+LG + TP+ ++ + + V G + LT G V
Sbjct: 496 TRN-KEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVL 554
Query: 448 WWG------LGLRS--SSISFHTP----------VLVTGLSSHQIVDVSIGDSHVLALSQ 489
G LGL S I H L LS ++I ++ G +H A+ +
Sbjct: 555 ACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE 614
Query: 490 YNEVYAWGSNTMGQCGQDNFSN 511
+ +G N GQ G N+
Sbjct: 615 RGRLLTFGCNKCGQLGVGNYKK 636
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 152/342 (44%), Gaps = 33/342 (9%)
Query: 188 SKVYTWGCNLHH-QILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG 246
S+VY WG Q LD ++ CS ++ + ++ + + ++ GG ++G+
Sbjct: 347 SEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ- 405
Query: 247 WLGLANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNT 306
LG + PK V VS C + + VT EG++Y++G +G +G
Sbjct: 406 -LGHGDKASYRQPKHVEKLQGKAIHQVS-CGDDFTVCVTDEGQLYAFGSDYYGCMGVDKV 463
Query: 307 LSQRRPKLI----MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR 362
P+++ + V QVS G +H +T + +Y+WG G++GRLG +
Sbjct: 464 SG---PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY 520
Query: 363 HTPTLVT--ELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG----------HEDT 410
+TP V + + AV CG T +L+Q G V + G KLG HE
Sbjct: 521 YTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK-VLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 411 GKV---TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFH 461
+V T+ + + L +++R + G + + A+ G + +G LG+ +
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 462 TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
+L L Q++ VS GD +A + N ++AWG+ G+
Sbjct: 640 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGR 681
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 119/251 (47%), Gaps = 36/251 (14%)
Query: 274 SKCSEAHVLTVTSE-GEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHS 332
S +EA + VTS EVY WG G+ + ++ +I G + QV AG++
Sbjct: 332 STVTEAPIAVVTSRTSEVYVWGGGKS---------TPQKLDVIKSGCSAR---QVCAGNT 379
Query: 333 HSAAVTEDGLLYTW-----GEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTL 385
H A VT + LYTW G HG+LGHGD S P V +L + VSCG+ T+
Sbjct: 380 HFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTV 439
Query: 386 VLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALR-----KFRVRKVCAGTSFSVAL 440
++ +G +++ GS G +G + KV+ P+V+E ++ V +V G + V L
Sbjct: 440 CVTDEGQ-LYAFGSDYYGCMGVD---KVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVL 495
Query: 441 TWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
T + V+ WG LGL S ++TP V + IV V G L+Q +V
Sbjct: 496 TRNKEVYSWGCGEYGRLGLDSEE-DYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVL 554
Query: 495 AWGSNTMGQCG 505
A G N + G
Sbjct: 555 ACGLNEFNKLG 565
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 38/265 (14%)
Query: 170 STPKLTYNIGDTDISV--AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIE 225
S P + GD + V + +VY+WGC + ++ + P+ +P I ++
Sbjct: 479 SNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQ 538
Query: 226 AGQFCTFLLDSTGGLLVYG----------KGWLGLAN---------TTIQPLPKRVPLEA 266
G TFLL +G +L G + G+ N TT L K++
Sbjct: 539 CGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSF-Y 597
Query: 267 AIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQ 326
I +++ K H + G + ++G + G+LG GN + L+ G L GK+V +
Sbjct: 598 KIRTIAPGK---THTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654
Query: 327 VSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--------ELSDVGAVS 378
VS G + A T+D ++ WG G +GRL + H + T L V +S
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLS 714
Query: 379 CGESHTLVLSQ---DGHTVWSMGSG 400
C HT+++ + + T+ S SG
Sbjct: 715 CRGWHTILIVEKVLNSKTIRSNSSG 739
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 411 GKVTTPKVIEALRK-FRVRKVCAGTSFSVALTWDGLVFWW----------GLGLRSSSIS 459
G +TP+ ++ ++ R+VCAG + +T + ++ W G S
Sbjct: 354 GGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKAS 413
Query: 460 FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNP 512
+ P V L I VS GD + ++ ++YA+GS+ G G D S P
Sbjct: 414 YRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGP 466
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 17/236 (7%)
Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
V + +++WG +G+LG G+ + + + +++ G HSA VT++G
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGS 69
Query: 343 LYTWGEGDHGRLGHGDLKS--RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSG 400
L+ G G+LG G + TP + V+CG T++L+++G V S GS
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQ-VLSCGSN 128
Query: 401 NLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS-- 457
+ G+LG + P+ IE LR+ +V + AG ++A T G VF WG GL SS
Sbjct: 129 SFGQLGVPHGPRRCVIPQAIELLRE-KVVSIAAGLRHALAATASGTVFQWGTGLASSGRR 187
Query: 458 ----------ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
++ P VTGL + Q V V G H +L+ E+Y WGSN GQ
Sbjct: 188 LCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQ 243
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 166/412 (40%), Gaps = 66/412 (16%)
Query: 188 SKVYTWGCNLHHQI-LDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
+ ++ WG N + Q+ L S +L + I+ I G + ++ G L V G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 245 ---KGWLGLANT--TIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
G LGL +T + P + L AI ++ C + +T G+V S G G
Sbjct: 75 LNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVA---CGWDFTIILTENGQVLSCGSNSFG 131
Query: 300 KLG--HGNTLSQRR---PKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEG---DH 351
+LG HG RR P+ I L ++V ++AG H+ A T G ++ WG G
Sbjct: 132 QLGVPHG----PRRCVIPQAIE--LLREKVVSIAAGLRHALAATASGTVFQWGTGLASSG 185
Query: 352 GRLGHGD----LKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDGHT-VWSMGSGNLGK 404
RL G + P+ VT L + AV G H+ L+ G VW GS G+
Sbjct: 186 RRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVW--GSNKHGQ 243
Query: 405 LGHEDTGKVTTPKVIEALRKFRVRKVCA---GTSFSVALTWDGLVFWWG------LG--- 452
L + + P+ IEA R F+ K+ A G + VA T G VF WG LG
Sbjct: 244 LASQ-AAFLLLPQRIEA-RCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTV 301
Query: 453 --------------LRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGS 498
L S TP + L+ ++S G H LA+ ++WG
Sbjct: 302 ETREGWESEKQDPSLPGSGPQKGTPSCLPCLTG--ATEISCGSEHNLAVIG-GVCHSWGW 358
Query: 499 NTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNSALS 550
N G CG D V P V GL + G+ S+A P+ AL
Sbjct: 359 NEHGMCG-DGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALCQLPALPALG 409
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 161/363 (44%), Gaps = 45/363 (12%)
Query: 188 SKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGW 247
S VY WG L + RL L + + + AG+ + +G L+++
Sbjct: 318 SSVYAWGGGLSSPL-----------RLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPP 366
Query: 248 LGLANTTIQPLPKRVPLEAAI---------VSLSVSKCSEAHVLTVTSEGEVYSWGVGEH 298
LG T+ P +P + V++ C + +T G + ++G G +
Sbjct: 367 LGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN 426
Query: 299 GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
G LGHGN +P I+ L G + QV+ G SH A++ DG L+ WG GD GRLG G
Sbjct: 427 GCLGHGNLTDISQPT-IVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGT 485
Query: 359 LKSRHTP--TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHE----DTGK 412
+S + P V + V CG +++L+ G V + GS KLG + D
Sbjct: 486 RESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGR-VLACGSNRFNKLGLDHLSLDEEP 544
Query: 413 VTTPKVIEALR----------KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSS 456
V +V EAL + + V GT+ S A+T G + +G LG S
Sbjct: 545 VPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSR 604
Query: 457 SISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
+S P V GL ++V V+ GD+ +A+ EVY+WG T G+ G+ + + +P
Sbjct: 605 RVS-RAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRP 663
Query: 517 SKV 519
++
Sbjct: 664 VQL 666
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 283 TVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
TV++ +++WG +G+LG G+ P+ + + V+ G HSA VT+ G
Sbjct: 10 TVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGD 69
Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGHTVWSMGSG 400
L+ G G+LG G + T+ L + V+CG T++L++ G V S GS
Sbjct: 70 LFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQ-VLSCGSN 128
Query: 401 NLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS-- 457
G+LG K P+ IE LR+ +V V AG ++A T G VF WG GL SS
Sbjct: 129 AFGQLGVPHGPRKCVVPQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTGLASSGRR 187
Query: 458 ----------ISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
++ P VTGL + V G H +L+ E+Y WG N GQ
Sbjct: 188 LCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQ 243
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 42/245 (17%)
Query: 208 KCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGLANTTIQP-------LPK 260
+C R ++ + + +RH A +TG + +G G L + + P L
Sbjct: 149 ECLREKVVCVAAGLRHALA-------TTATGSVFQWGTG-LASSGRRLCPGQNLPLFLTA 200
Query: 261 RVPLEAAIVSLSVSKCSEA---HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMG 317
+ P + S + C+ A H ++T GE+Y WG +HG+L ++
Sbjct: 201 KEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAH 260
Query: 318 GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG--------------------HG 357
++VT V +G +H A TE G ++TWG D+G+LG G
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQG 320
Query: 358 DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPK 417
S P+ + L+ +SCG H L + +D W G G G V TP
Sbjct: 321 PQNS--VPSPLHCLTGATEISCGSEHNLAVIRDKCCSW--GWNEHGMCGDGTESNVWTPT 376
Query: 418 VIEAL 422
++AL
Sbjct: 377 PVQAL 381
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 23/262 (8%)
Query: 279 AHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVT 338
H VT G+++ G+ + G+LG G+T R I L G + QV+ G + +T
Sbjct: 59 GHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLR-FTICKPLRGCPIRQVACGWDFTIMLT 117
Query: 339 EDGLLYTWGEGDHGRLG--HGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWS 396
E G + + G G+LG HG K + V V+ G H L + G +V+
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATG-SVFQ 176
Query: 397 MGSGNLGKLGHEDTGKVTTPKVIEALRKFRV------RKVC--AGTSFSVALTWDGLVFW 448
G+G L G P + A RV VC AG+ S +LT G ++
Sbjct: 177 WGTG-LASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYV 235
Query: 449 WGLG----LRSSSISFHTPVLVTG--LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMG 502
WG L S ++ P + ++ V G +H++A ++ +V+ WG G
Sbjct: 236 WGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYG 295
Query: 503 QCGQ----DNFSNPVDQPSKVV 520
Q G+ PV+Q S +
Sbjct: 296 QLGRRLEPPEAQKPVEQDSSLA 317
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 137/339 (40%), Gaps = 66/339 (19%)
Query: 221 IRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTT-------IQPLPKRVPLEAAIVS 270
I+ + G + ++ G L V G G LGL +T +PL + P+
Sbjct: 51 IKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPL-RGCPIRQV--- 106
Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRR---PKLIMGGLYGKRVT 325
C + +T +G+V S G G+LG HG R+ P+ I ++V
Sbjct: 107 ----ACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG----PRKCVVPQAIE--CLREKVV 156
Query: 326 QVSAGHSHSAAVTEDGLLYTWGEG---DHGRLGHGD----LKSRHTPTLVTELSDVGAVS 378
V+AG H+ A T G ++ WG G RL G + P+ VT L + AV
Sbjct: 157 CVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVC 216
Query: 379 C--GESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEA--LRKFRVRKVCAG 433
G H+ L+ G VW G G+L + P+ IEA + +V V +G
Sbjct: 217 AVAGSDHSASLTDTGELYVW--GRNKHGQLASRAV-FLPLPQRIEAHYFQDEKVTAVWSG 273
Query: 434 TSFSVALTWDGLVFWWG------LGLR------------SSSISFHTPVLVTGLSSHQIV 475
+ VA T G VF WG LG R SS++F P H +
Sbjct: 274 WTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLT 333
Query: 476 ---DVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSN 511
++S G H LA+ + ++ +WG N G CG SN
Sbjct: 334 GATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDGTESN 371
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 29/240 (12%)
Query: 269 VSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVS 328
VS VS AH L +T+EG+++SWG + G+LGHG+T PKLI GL + + +
Sbjct: 123 VSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIE-GLGEEVIVAAA 181
Query: 329 AGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSR--HTPTLVTELSDVGAVSCGESHTLV 386
G +H+ A+TE+G +YT+GE G+LG G+ T+ + V+CG +++
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMI 241
Query: 387 LSQDGHTVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWDGL 445
+ G+ ++S G G+LGH GK + + IE + R+V + + T DG
Sbjct: 242 VDCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRV----AIFIEKTKDGQ 296
Query: 446 VFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
V P +V DV+ G +H L L V++WG G+ G
Sbjct: 297 V-------------LPVPNVVA-------RDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI- 315
P+P V + A C H L + S+ V+SWG G +G+LGH + P+L+
Sbjct: 299 PVPNVVARDVA--------CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVK 350
Query: 316 MGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--D 373
+ G+ TQ+ G+ S A++E G L+ WG + R +S P V +L
Sbjct: 351 LFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSR------ESTMYPKAVQDLCGWK 404
Query: 374 VGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDT--GKVTTPKVIEALRKFRVRKVC 431
+ +++CG+S +V + D W S G+LG+ D TT + ++ L +V
Sbjct: 405 IRSLACGKSSIIVAADDSTISWGP-SPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVV 463
Query: 432 AGTSFSVALT 441
G S S+ +
Sbjct: 464 MGYSHSLVIA 473
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 144/355 (40%), Gaps = 61/355 (17%)
Query: 183 ISVAHSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSNIRHIEA-GQFCTFLLDSTGGL 240
I K+++WG N Q+ + P+L + L + A G+ T L G +
Sbjct: 137 IITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTV 196
Query: 241 LVYGK---GWLGLANTTIQPL-PKRVPLEAA-IVSLSVSKCSEAHVLTVTSEGEVYSWGV 295
+G+ G LG N T L P + IV ++ C + V +G +YS+G
Sbjct: 197 YTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVA---CGAEFSMIVDCKGNLYSFGC 253
Query: 296 GEHGKLGH---GNTLSQRRPKLIMGGLYGKRVT--------------------QVSAGHS 332
E+G+LGH G +++ + L +RV V+ G +
Sbjct: 254 PEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGAN 313
Query: 333 HSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGA--VSCGESHTLVLS 388
H+ + +++WG G +GRLGH + K P LV + GA + CG + LS
Sbjct: 314 HTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALS 373
Query: 389 QDGHTVWSMGSGNLGKLGHEDTGKVTT--PKVIEALRKFRVRKVCAGTSFSVALTWDGLV 446
+ G L G +T + +T PK ++ L +++R + G S + D +
Sbjct: 374 E---------MGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTI 424
Query: 447 FW----------WGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
W +G SS + + G+ S Q+V +G SH L +++ +
Sbjct: 425 SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVV---MGYSHSLVIARQD 476
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 371 LSDVGAVSC-----GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF 425
LSDV VSC +H+L+++ +G +WS G + G+LGH DT ++ PK+IE L +
Sbjct: 118 LSDV-QVSCVVSGPCAAHSLIITTEGK-LWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE 175
Query: 426 RVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSI 479
+ G + ++ALT +G V+ +G LG + + + +P + + IV V+
Sbjct: 176 VIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVAC 234
Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
G + + +Y++G GQ G ++
Sbjct: 235 GAEFSMIVDCKGNLYSFGCPEYGQLGHNS 263
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 21/251 (8%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H L +T GE+Y WG H +L ++ + + + +RV +S G + SAA+ E
Sbjct: 45 HSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIME 104
Query: 340 DGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQ-----DGHTV 394
+GLLY WG G K +PT V L V VS G +H V++ + +V
Sbjct: 105 NGLLYVWGTLIEGG------KCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTPEKRSV 158
Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR 454
++ G+ G+LG P+ + K VC G F+ A+ VF WG
Sbjct: 159 YTWGTNRKGQLGVVGDSITNAPRRVTLGSK--AISVCCGEEFTAAIVEGNEVFVWGYNKS 216
Query: 455 SSSISFHT----PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN-TMGQCGQD-- 507
S ++ + V IV++S +++ A S V WGSN + + G D
Sbjct: 217 RQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQVCRIGDDKF 276
Query: 508 -NFSNPVDQPS 517
NF N + Q S
Sbjct: 277 INFPNKIKQIS 287
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 19/184 (10%)
Query: 178 IGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDST 237
+ D+ + VYTWG N Q+ + PR +L S + G+ T +
Sbjct: 146 VADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSKAISVCCGEEFTAAIVEG 205
Query: 238 GGLLVYG--KGWLGLANTT--IQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSW 293
+ V+G K +N + I +P + L IV LS C++ ++ + G V W
Sbjct: 206 NEVFVWGYNKSRQICSNNSDEIISIPVKPFLGRDIVELS---CTKNYIAARSGVGNVCVW 262
Query: 294 GVGEH-GKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHG 352
G E ++G ++ + ++ Q+SA SH ++E G +++WG +
Sbjct: 263 GSNEQVCRIGDDKFIN-----------FPNKIKQISASTSHILVLSEKGEIFSWGNSEDN 311
Query: 353 RLGH 356
+L H
Sbjct: 312 QLSH 315
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 480 GDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIA 539
G +H LAL++ E+Y WG N Q + +D+P K+ + + V+ I G FS A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 246 GWLGLANTTIQPLPKRVP-LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
G LGL + + P V L+ V + C H L T G+VY+ G G+LG G
Sbjct: 65 GQLGLGSKSTVSKPTCVKALKPEKVKFAA--CGRNHTLVSTEGGKVYAAGGNNEGQLGLG 122
Query: 305 NTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHT 364
+T + LI +++ Q+SAG + SAA+TEDG L+ WG+ G++G ++ +
Sbjct: 123 DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCV 182
Query: 365 PTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVT--TPKVIEAL 422
P VT + +SCG H+ ++ +G +++ G GKLG + V P+ + +
Sbjct: 183 PQQVTVGKPISWISCGYYHSAFVTTEGQ-LYTFGEPECGKLGLPNQLLVNHRMPQPVPGI 241
Query: 423 RKFRVRKVCAGTSFSVALTWDGLVFWWGLG----LRSSSISFHT--PVLVTGLSSHQIVD 476
+V +V G +V LT + V+ +GLG L + F T P + + +I
Sbjct: 242 PG-KVVQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISF 299
Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
++ G++H ++ +Y +G G+ G
Sbjct: 300 IACGENHTALITDMGLMYTFGDGRHGKLG 328
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTEL--SDVGAVSCGES 382
T +S G H+A VT + LY +G + G+LG G + PT V L V +CG +
Sbjct: 38 TFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRN 97
Query: 383 HTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFR-VRKVCAGTSFSVALT 441
HTLV S +G V++ G N G+LG DT + +T +I R ++++ AG++ S ALT
Sbjct: 98 HTLV-STEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 442 WDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYA 495
DG +F WG +GL + + + P VT I +S G H ++ ++Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVT-NVCVPQQVT--VGKPISWISCGYYHSAFVTTEGQLYT 213
Query: 496 WGSNTMGQCGQDN---FSNPVDQPSKVVGLEDVCVRQICAG 533
+G G+ G N ++ + QP V G+ V+ C G
Sbjct: 214 FGEPECGKLGLPNQLLVNHRMPQP--VPGIPGKVVQVACGG 252
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 298 HGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHG 357
+G+LG G+ P+ + + V +++ G HSA VT+ G L+ G G+LG G
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 84
Query: 358 DLKS--RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG-HEDTGKVT 414
+ TP + V+CG T++L+++G + S GS + G+LG +
Sbjct: 85 HTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVL-SCGSNSFGQLGVPHGPRRCV 143
Query: 415 TPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSS------------ISFHT 462
P+ IE L K +V + AG +VA T G+VF WG GL S +
Sbjct: 144 VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKE 202
Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
P VTGL + + + V G H +L+ EVY WGSN GQ + PV Q +
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCF 262
Query: 523 EDVCVRQICAGSLFSIAYT 541
++ V I +G +A T
Sbjct: 263 QNEKVTAIWSGWTHLVAQT 281
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 155/373 (41%), Gaps = 53/373 (14%)
Query: 218 PSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQPLPKRVPLEAAI-VSLSV 273
P ++R I G + ++ G L V G G LGL +T + +P P ++ +
Sbjct: 48 PRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHT--EDIPYFTPCKSLFGCPIQQ 105
Query: 274 SKCSEAHVLTVTSEGEVYSWGVGEHGKLG--HGNTLSQRR---PKLIMGGLYGKRVTQVS 328
C + +T G+V S G G+LG HG RR P+ I L+ ++V ++
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG----PRRCVVPQAIE--LHKEKVVCIA 159
Query: 329 AGHSHSAAVTEDGLLYTWGEGDHG---RLGHGD----LKSRHTPTLVTELSDVGA--VSC 379
AG H+ A T G+++ WG G RL G + P+ VT L + A V
Sbjct: 160 AGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLA 219
Query: 380 GESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA--LRKFRVRKVCAGTSFS 437
G H+ L+ G V+ GS G+L +E + P+ IEA + +V + +G +
Sbjct: 220 GSDHSASLTDAGE-VYVWGSNKHGQLANE-AAFLPVPQKIEAHCFQNEKVTAIWSGWTHL 277
Query: 438 VALTWDGLVFWWG------------------LGLRSSSISFHTPVLVTGLSSHQIV---D 476
VA T G +F WG L + S + P S H + +
Sbjct: 278 VAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATE 337
Query: 477 VSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLF 536
VS G H LA+ Y+WG N G CG +N V P V L + G+
Sbjct: 338 VSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEAN-VWAPKPVQALLSSSGLLVGCGAGH 395
Query: 537 SIAYTVPPSNSAL 549
S+A P++ AL
Sbjct: 396 SLALCQLPAHPAL 408
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 23/173 (13%)
Query: 188 SKVYTWGCNLHHQILDE---------VRGKC-SRPRLQSLPSNIRHI----EAGQFCTFL 233
+VY WG N H Q+ +E + C ++ ++ S H+ E G+ T+
Sbjct: 231 GEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWG 290
Query: 234 LDSTGGL---LVYGKGWLGLANTTIQPL---PKRVPLEAAIVSLSVS-KCSEAHVLTVTS 286
G L L +GW + P P +P ++ + C H L +
Sbjct: 291 RADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG 350
Query: 287 EGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
G YSWG EHG G G + PK + L V G HS A+ +
Sbjct: 351 -GVCYSWGWNEHGMCGDGTEANVWAPKPVQ-ALLSSSGLLVGCGAGHSLALCQ 401
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
C H+L ++S G++ +WG G+ G G++ + G + +++ G HSA
Sbjct: 783 CGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPA--IEKIACGQFHSA 840
Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRH--TPTLVTEL-SDVGAVSCGESHTLVLSQDGH 392
+ DG L+T+G G G+LGHG + + PT V L V ++CG +HT+VL+ G
Sbjct: 841 FICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDTGR 900
Query: 393 TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
V GSG+ G++G +D K L RVR + S+ +T D VF WG
Sbjct: 901 -VLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 32/298 (10%)
Query: 221 IRHIEAGQFCTFLLDSTGGLLVYGKG-WLGLA----NTTIQPLPKRVPLEAAIVSLSVSK 275
I I GQF + + S G L +G G W L N + Q +P RV I ++
Sbjct: 829 IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV--NGLICKVTQIA 886
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ--RRPKLIMGGLYGKRVTQVSAGHSH 333
C AH + +T G V G G +G++G + + + L +G L RV ++ + H
Sbjct: 887 CGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPL---RVRDIATHYYH 943
Query: 334 SAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHT 393
S +TED ++ WG +LK R ++ ++ + + + S +G T
Sbjct: 944 SICITEDNRVFEWGRNPQ------ELKMRMF--VMKKIRSAQLKNTEDPSSPSPSTNGST 995
Query: 394 VWSMGSGNL-GKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
+ NL ++ ED G ++ + V G S S +T +G ++ WG G
Sbjct: 996 --PRVNLNLPAEIPREDLGLREVKHFLDG----NIVSVACGLSHSALITSEGTLYTWGKG 1049
Query: 453 L-----RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
L + P V + + V+VS+G++H +A + V+AWG N GQCG
Sbjct: 1050 LDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 42/235 (17%)
Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKGWLGL--ANTTIQPLPKRVPLEAAIVS 270
R+ L + I G+ T +L TG +LV G G G + I+ + PL +
Sbjct: 874 RVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR 933
Query: 271 LSVSKCSEAHVLTVTSEGEVYSWGVGEH--------------------------GKLGHG 304
+ H + +T + V+ WG +G
Sbjct: 934 VRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNG 993
Query: 305 NT------LSQRRPKLIMG-----GLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGR 353
+T L P+ +G + V+ G SHSA +T +G LYTWG+G +
Sbjct: 994 STPRVNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQ 1053
Query: 354 LGHGDLKSRHTPTLVTELSDVG--AVSCGESHTLVLSQDGHTVWSMGSGNLGKLG 406
LGHG+ R P V E + VS G +HT+ + DG +V++ G + G+ G
Sbjct: 1054 LGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDG-SVFAWGKNDFGQCG 1107
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 376 AVSCGESHTLVLSQDGH-TVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGT 434
A++CG H LVLS G + W G G+ G + ++ ++ + K+ G
Sbjct: 780 AIACGAEHILVLSSSGQLSAW--GGNRFGQCGVGHSFRIANLHQVDGDWP-AIEKIACGQ 836
Query: 435 SFSVALTWDG--LVFWWGL------GLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLA 486
S + DG F WG+ G R++S P V GL ++ ++ G +H +
Sbjct: 837 FHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQL-VPTRVNGLIC-KVTQIACGRAHTVV 894
Query: 487 LSQYNEVYAWGSNTMGQCGQDN 508
L+ V GS + GQ G D+
Sbjct: 895 LTDTGRVLVCGSGSYGQMGVDD 916
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 88.2 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 44/196 (22%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H L + + G+V+SWG G HG+LGHG ++ P+L + L G + +V+AG HS V+E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRL-LEALQGLTMAEVAAGGWHSVCVSE 227
Query: 340 DGLLYTWGEGDHGRLG--------HGDLKSRHTPTLVTELSDV--------GA------- 376
G +Y WG + G+L G+ +R L + S V GA
Sbjct: 228 TGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAV 287
Query: 377 -----------------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
VSCG HT V+++ G +++ G G G+LGHEDT + P+ +
Sbjct: 288 QPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGE-LYTWGWGKYGQLGHEDTTSLDWPRRV 346
Query: 420 EAL--RKFRVRKVCAG 433
E ++ +V+ V G
Sbjct: 347 EYFVDKQLQVKAVTCG 362
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 61/211 (28%), Positives = 90/211 (42%), Gaps = 45/211 (21%)
Query: 222 RHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
R +E G LLD+ G + +G G G L + T++ + LEA + L++++ +
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-LQGLTMAEVAAGG 219
Query: 280 -HVLTVTSEGEVYSWGVGEHGKLG--------HGNTLSQRRPKLIMGGLYGKRV------ 324
H + V+ G++Y WG E G+L G T+++ L G KR
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDG 279
Query: 325 -----------------------TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
+VS G H+A VT G LYTWG G +G+LGH D S
Sbjct: 280 APAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 362 RHTPTLVTELSD----VGAVSCGESHTLVLS 388
P V D V AV+CG +T V +
Sbjct: 340 LDWPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 27/235 (11%)
Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCG 380
R Q+ G H+ + G +++WG G HG+LGHG L++ P L+ L + V+ G
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAG 218
Query: 381 ESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
H++ +S+ G +W G ++G++ P A V + G
Sbjct: 219 GWHSVCVSETGDIYIW----------GWNESGQLALPTRNLAEDGETVAREATG------ 262
Query: 440 LTWDG-LVFWWGL---GLRSSSISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
L DG V G G + I+ P L+ V VS G H +++ E+Y
Sbjct: 263 LNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELY 322
Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLED--VCVRQICAGSLFSIAYTVPPSNS 547
WG GQ G ++ + +D P +V D + V+ + G + Y V S
Sbjct: 323 TWGWGKYGQLGHED-TTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDV 477
+ R R++ G ++ L G VF WG G R + T P L+ L + +V
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGG-RHGQLGHGTLEAELEPRLLEALQGLTMAEV 215
Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQ 503
+ G H + +S+ ++Y WG N GQ
Sbjct: 216 AAGGWHSVCVSETGDIYIWGWNESGQ 241
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 67/274 (24%)
Query: 277 SEAHVLTVTSEG-EVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
+EA + VTS EVY WG G + ++ + GG R QV AG +H A
Sbjct: 317 TEAPIAVVTSRSSEVYVWG---------GGKTTPQKLDVFKGGW---RARQVCAGDAHFA 364
Query: 336 AVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVW 395
VT + LYTW ++ G
Sbjct: 365 VVTVEKELYTW----------------------------------------VNMQG---- 380
Query: 396 SMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
GS G+LGH D PK +E L+ V+KV G+ F+V +T +G ++ +G
Sbjct: 381 --GSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYG 438
Query: 451 -LGLRSSSIS-FHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDN 508
LG+ S+ S P+LV + + VS GDSH++AL++ VY+WG G+ G D+
Sbjct: 439 CLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDS 498
Query: 509 FSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTV 542
+ V P KV +C+ +C GS S T+
Sbjct: 499 -EDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTL 531
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 148/345 (42%), Gaps = 29/345 (8%)
Query: 183 ISVAHSKVYTWGC-NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLL 241
++ S+VY WG Q LD +G ++ + ++ + + ++ GG
Sbjct: 324 VTSRSSEVYVWGGGKTTPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSK 383
Query: 242 VYGKGWLGLANTTIQPLPKRVPLEAAIVSLSVSK--CSEAHVLTVTSEGEVYSWGVGEHG 299
++G+ LG + PK V + SV K C + +T EG++YS+G +G
Sbjct: 384 LHGQ--LGHGDRASYRQPKHV---EKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYG 438
Query: 300 KLGHGNTL-SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGD 358
LG + S+ L++ + V QVS G SH A+T +Y+WG G++GRLG
Sbjct: 439 CLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDS 498
Query: 359 LKSRHTPTLVTELSDVGAVS--CGESHTLVLSQDG---------HTVWSMGSGNLGKLGH 407
++P V + V+ CG + +L+ G H + G + H
Sbjct: 499 EDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558
Query: 408 EDTGKV---TTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
E +V T+ + + L +++R + G + + A+ G + +G LG+
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRK 618
Query: 459 SFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
+L L Q++ VS GD A + N ++AWG+ G+
Sbjct: 619 HLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGR 663
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 25/198 (12%)
Query: 179 GDTDI-SVAHSK-VYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLL 234
GD+ I ++ SK VY+WGC + ++ + P+ + I ++ G +FLL
Sbjct: 470 GDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLL 529
Query: 235 DSTGGLLVYG---KGWLGLANTT--------IQPLPKRVPLEAA-------IVSLSVSKC 276
TG +L G LGL T Q +P L A I S+S +
Sbjct: 530 TLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGR- 588
Query: 277 SEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAA 336
H + G + ++G + G+LG G+ L+ G L GK+V +VS G + A
Sbjct: 589 --THTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Query: 337 VTEDGLLYTWGEGDHGRL 354
T D ++ WG G +GRL
Sbjct: 647 ATADNHIFAWGNGGNGRL 664
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 31/246 (12%)
Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
L V VS AH L +T+EG+++SWG E G+LGHG+T P+LI GL +
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIE-GLSHEV 203
Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT---LVTELSDVGAVSCG 380
+ + G +H+ A+TE G ++ +GE G+LG G+ ++ P+ ++ + ++CG
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACG 262
Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVA 439
++++ G+ ++S G G+LGH GK + + IE + R+V + +
Sbjct: 263 AEFSMIMDCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV----AIFIE 317
Query: 440 LTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
T DG + P +V + DV+ G +H L L V++WG
Sbjct: 318 KTKDGQI-------------LPVPNVV-------VRDVACGANHTLVLDSQKRVFSWGFG 357
Query: 500 TMGQCG 505
G+ G
Sbjct: 358 GYGRLG 363
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHS 334
C H L + S+ V+SWG G +G+LGH + P+L+ + G+ +Q+ AG++ S
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCS 396
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
AV+E G L+ WG + R +S P V +L + +++CG+S +V + +
Sbjct: 397 FAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 450
Query: 393 TVWSMGSGNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
W S G+LG+ D T + ++ L +V G S S+ + D
Sbjct: 451 ISWGP-SPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 502
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 142/349 (40%), Gaps = 61/349 (17%)
Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
K+++WG N Q+ + PRL S+ I G+ T L TG + +G
Sbjct: 168 EGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFG 227
Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIV----SLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
+ G LGL N T VP A I+ ++ C + + +G +YS+G E
Sbjct: 228 ENKMGQLGLGNQT-----DAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPE 282
Query: 298 HGKLGHGN---------------TLSQRRPKLIMGGLYGKR--------VTQVSAGHSHS 334
+G+LGH + L RR + + + V V+ G +H+
Sbjct: 283 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 342
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGA--VSCGESHTLVLSQD 390
+ +++WG G +GRLGH + K P LV + GA + G + + +S+
Sbjct: 343 LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSE- 401
Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTT--PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
G L G +T + +T PK ++ L +R+R + G S S+ + D
Sbjct: 402 --------VGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKS-SIIVAADESTIS 452
Query: 449 WGLGLRSSSISF--HTPVLVTGLSSHQIVD------VSIGDSHVLALSQ 489
WG + + H P T + +D V++G SH L +++
Sbjct: 453 WGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 501
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 416 PKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTG 468
P L RVR V +G+ + S+ +T +G ++ WG + + P L+ G
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEG 198
Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
LS IV + G +H LAL++ V+A+G N MGQ G N ++ V P++++ +
Sbjct: 199 LSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITK 258
Query: 529 QICAGSLFSI 538
C G+ FS+
Sbjct: 259 MAC-GAEFSM 267
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
SC +H+L+++ +G +WS G G+LGH DT +V P++IE L + G + +
Sbjct: 157 SCA-AHSLLITTEGK-LWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 214
Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
+ALT G VF +G LGL + + + +P + + I ++ G + +
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIM-YNGQPITKMACGAEFSMIMDCKG 273
Query: 492 EVYAWGSNTMGQCGQDN 508
+Y++G GQ G ++
Sbjct: 274 NLYSFGCPEYGQLGHNS 290
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSL----PSNIRHIEAGQFCTFLLDSTGGLL 241
+ +V++WG + ++ + PRL L I AG C+F + GGL
Sbjct: 347 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLF 406
Query: 242 VYGKGWLGLANTTIQP--LPKRVP--LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
+ G NT+ + PK V I SL+ K S + V ++ SWG
Sbjct: 407 FW-----GATNTSRESTMYPKAVQDLCGWRIRSLACGKSS----IIVAADESTISWGPSP 457
Query: 298 -HGKLGHGNTLSQRRPKLIMGG-----LYGKRVTQVSAGHSHSAAVTED 340
G+LG+G+ +PK L G QV+ G+SHS + D
Sbjct: 458 TFGELGYGD----HKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 502
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 44/196 (22%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H L + + G+V+SWG G HG+LGHG ++ P+L + L G + +V+AG HS V+E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRL-LEALQGLVMAEVAAGGWHSVCVSE 227
Query: 340 DGLLYTWGEGDHGRLG--------HGDLKSRHTPTLVTELSDV----GA----------- 376
G +Y WG + G+L G+ +R L + S V GA
Sbjct: 228 TGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAV 287
Query: 377 -----------------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVI 419
SCG HT V+++ G +++ G G G+LGHEDT + P+ +
Sbjct: 288 QPFPALLDLPMGSDAVKASCGSRHTAVVTRTGE-LYTWGWGKYGQLGHEDTTSLDRPRRV 346
Query: 420 EAL--RKFRVRKVCAG 433
E ++ +V+ V G
Sbjct: 347 EYFVDKQLQVKAVTCG 362
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 45/211 (21%)
Query: 222 RHIEAGQFCTFLLDSTGGLLVYGKGWLG-LANTTIQPLPKRVPLEAAIVSLSVSKCSEA- 279
R +E G LLD+ G + +G G G L + T++ + LEA + L +++ +
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGG 219
Query: 280 -HVLTVTSEGEVYSWGVGEHGKLG--------HGNTLSQRRPKLIMGGLYGKRV------ 324
H + V+ G++Y WG E G+L G T+++ +L G KR
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 325 -----------------------TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKS 361
+ S G H+A VT G LYTWG G +G+LGH D S
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 362 RHTPTLVTELSD----VGAVSCGESHTLVLS 388
P V D V AV+CG +T V +
Sbjct: 340 LDRPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 27/235 (11%)
Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDV--GAVSCG 380
R Q+ G H+ + G +++WG G HG+LGHG L++ P L+ L + V+ G
Sbjct: 159 RARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAG 218
Query: 381 ESHTLVLSQDGHT-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVA 439
H++ +S+ G +W G ++G++ P A V + +
Sbjct: 219 GWHSVCVSETGDIYIW----------GWNESGQLALPTRNLAEDGETVARE------ATE 262
Query: 440 LTWDGLVFWWGLGLRSSS----ISFHT-PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
L DG G + I+ P L+ V S G H +++ E+Y
Sbjct: 263 LNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELY 322
Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLED--VCVRQICAGSLFSIAYTVPPSNS 547
WG GQ G ++ + +D+P +V D + V+ + G + Y V S
Sbjct: 323 TWGWGKYGQLGHED-TTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDV 477
+ R R++ G ++ L G VF WG G R + T P L+ L + +V
Sbjct: 157 ELRARQLELGAEHALLLDAAGQVFSWGGG-RHGQLGHGTLEAELEPRLLEALQGLVMAEV 215
Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQ 503
+ G H + +S+ ++Y WG N GQ
Sbjct: 216 AAGGWHSVCVSETGDIYIWGWNESGQ 241
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 42/194 (21%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
HVL + + G+V+SWG G HG+LGHG ++ P+L+ L G R+ +V+AG HS ++E
Sbjct: 172 HVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE-ALQGLRMAKVAAGGWHSVCLSE 230
Query: 340 DGLLYTWGEGDHGRL------GHGDLKSRHTPTLVTE--------LSDVGA--------- 376
G +Y WG + G+L G + R T + E ++D GA
Sbjct: 231 TGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQP 290
Query: 377 ---------------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEA 421
SCG HT V+++ G +++ G G G+LGH+D+ + P +E
Sbjct: 291 FPALLDLPLGSDAVMASCGSRHTAVVTRTGE-LYTWGWGKYGQLGHKDSTSLDRPCCVEY 349
Query: 422 L--RKFRVRKVCAG 433
R+ VR V G
Sbjct: 350 FVERQLEVRAVTCG 363
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 92/233 (39%), Gaps = 35/233 (15%)
Query: 323 RVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCG 380
RV Q+ G H + G +++WG G HG+LGHG L++ P L+ L + V+ G
Sbjct: 162 RVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVAL 440
H++ LS+ +G++ G ++G++ P K + + L
Sbjct: 222 GWHSVCLSE---------TGDIYIWGWNESGQLALPTRSGTENKAEREE-------ATEL 265
Query: 441 TWDGLVFWWGLGLRSSSISFH------TPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVY 494
DGL L + + H P L+ V S G H +++ E+Y
Sbjct: 266 NEDGLKE--ELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELY 323
Query: 495 AWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYTVPPSNS 547
WG GQ G + S +D+P CV L A T P N+
Sbjct: 324 TWGWGKYGQLGHKD-STSLDRP--------CCVEYFVERQLEVRAVTCGPWNT 367
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 46/170 (27%)
Query: 186 AHSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIR--HIEAGQFCTFLLDSTGGLLVY 243
A +V++WG H Q+ PRL +R + AG + + L TG + ++
Sbjct: 178 AAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 244 G---KGWLGLANTT------------------------------------IQPLPK--RV 262
G G L L + IQP P +
Sbjct: 238 GWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDL 297
Query: 263 PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP 312
PL + V ++ C H VT GE+Y+WG G++G+LGH ++ S RP
Sbjct: 298 PLGSDAV---MASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRP 344
Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 424 KFRVRKVCAGTSFSVALTWDGLVFWWGLGLRSSSISFHT------PVLVTGLSSHQIVDV 477
+ RVR++ G + L G VF WG G R + T P L+ L ++ V
Sbjct: 160 ELRVRQLELGAEHVLLLCAAGQVFSWGAG-RHGQLGHGTLEAELEPRLLEALQGLRMAKV 218
Query: 478 SIGDSHVLALSQYNEVYAWGSNTMGQ 503
+ G H + LS+ ++Y WG N GQ
Sbjct: 219 AAGGWHSVCLSETGDIYIWGWNESGQ 244
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
+ S++ C+ AH L +T EG+++SWG + G+LGHG+ PKLI L G+
Sbjct: 141 VRSVASGSCA-AHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIE-SLKGEVFVHA 198
Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD---VGAVSCGESHT 384
+ G +H+ A+TE+G +Y +GE G+LG G+ K+ P+ L + + V+CG +
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGAEFS 257
Query: 385 LVLSQDGHTVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
+++ G+ ++S G G+LGH GK + + IE + R++ + + T D
Sbjct: 258 MIMDCKGN-LYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRI----AIFIEKTKD 312
Query: 444 GLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ 503
G + P +V + D++ G +H L L V++WG G+
Sbjct: 313 GQI-------------LPVPNVV-------VRDIACGINHSLILDSQKRVFSWGFGGYGR 352
Query: 504 CGQDNFSNPVDQPSKVVGLEDVCVR---QICAGSLFSIAYT 541
G + + ++V L D R QI AG+ S A +
Sbjct: 353 LGHSEQRD--EMVPRLVKLFDFPGRGAAQIYAGATCSFAVS 391
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHS 334
C H L + S+ V+SWG G +G+LGH + P+L+ + G+ Q+ AG + S
Sbjct: 328 CGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCS 387
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGH 392
AV+E G L+ WG + R S P V +L V +++CG+S +V + +
Sbjct: 388 FAVSEMGGLFFWGATNTSR------DSTMYPKAVQDLCGWKVRSLACGKSSIIVAADEST 441
Query: 393 TVWSMGSGNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
W S G+LG+ D TT + ++ L +V G S ++ + D
Sbjct: 442 ISWGP-SPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTLVVARD 493
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 59/348 (16%)
Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRL-QSLPSNIR-HIEAGQFCTFLLDSTGGLLVYG 244
K+++WG N Q+ + P+L +SL + H G+ T L G + +G
Sbjct: 159 EGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFG 218
Query: 245 K---GWLGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGK 300
+ G LGL N T P P ++ ++ C + + +G +YS+G E+G+
Sbjct: 219 ENKMGQLGLGNKTDAVPSPAQILYNGQPITKVA--CGAEFSMIMDCKGNLYSFGCPEYGQ 276
Query: 301 LGH---GNTLSQRRPKLIMGGLYGKR--------------------VTQVSAGHSHSAAV 337
LGH G +++ + L +R V ++ G +HS +
Sbjct: 277 LGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLIL 336
Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGA--VSCGESHTLVLSQDGHT 393
+++WG G +GRLGH + + P LV + GA + G + + +S+
Sbjct: 337 DSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSE---- 392
Query: 394 VWSMGSGNLGKLGHEDTGKVTT--PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW--- 448
G L G +T + +T PK ++ L ++VR + G S + + + W
Sbjct: 393 -----MGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIVAADESTISWGPS 447
Query: 449 -------WGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
+G SS + + G+ S Q++ +G+SH L +++
Sbjct: 448 PTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVI---MGNSHTLVVAR 492
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 91/186 (48%), Gaps = 16/186 (8%)
Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
SH + TE GL+ T G+GD G+LG G+ + R P LV L DV G HT+ LSQ
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQS 85
Query: 391 GHTVWSMGSGNLGKLGHEDT--GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
G V+S G + G LG + + G P +E K V +V AG S + ALT DG VF
Sbjct: 86 GQ-VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFL 142
Query: 449 WG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
WG +GL PV V +V V+ G+ H++ L+ ++Y G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDAPVVKVASGNDHLVMLTNDGDLYTLGCGE 200
Query: 501 MGQCGQ 506
GQ G+
Sbjct: 201 QGQLGR 206
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 38/290 (13%)
Query: 246 GWLGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
G LGL + ++ P VPL +V ++ H + ++ G+VYS+G + G LG
Sbjct: 46 GQLGLGESVLERKKPALVPLLQDVVQ---AEAGGMHTVCLSQSGQVYSFGCNDEGALGRD 102
Query: 305 NTL--SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLGHGD-L 359
++ S+ P + ++V QVSAG SH+AA+TEDG ++ WG ++G +G + +
Sbjct: 103 TSVEGSEMVPGKVE---LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPM 159
Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL-----------GHE 408
K P V + V V+ G H ++L+ DG ++++G G G+L G +
Sbjct: 160 KKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD-LYTLGCGEQGQLGRVPELFANRGGRQ 218
Query: 409 DTGKVTTPKVI----EALR-KFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
G++ P+ + R + R + G F+ A++ +G V+ +G LG +
Sbjct: 219 GLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTG 278
Query: 458 ISFHTPVLVTGL--SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
F P +T S+ V S G H + + + Y+ G G+ G
Sbjct: 279 SCF-IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG 327
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 43/336 (12%)
Query: 188 SKVYTWGCNLHHQILDE--VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
+VY++GCN + + V G P L + + AG T L G + ++G
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 245 ----KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
G +GL + + P +V L+A +V ++ H++ +T++G++Y+ G GE G
Sbjct: 146 FRDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVA---SGNDHLVMLTNDGDLYTLGCGEQG 202
Query: 300 KLGHGNTLSQRR-----------PKLIM---GGLYGK-RVTQVSAGHSHSAAVTEDGLLY 344
+LG L R P+ ++ G G+ R G + A++ +G +Y
Sbjct: 203 QLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY 262
Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD-----VGAVSCGESHTLVLSQDGHTVWSMGS 399
+G ++ +LG S P +T + VG S G+ HT+ + +G +S+G
Sbjct: 263 GFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVG-FSGGQHHTVCMDSEGKA-YSLGR 320
Query: 400 GNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR---- 454
G+LG E + + P +I L V V G S A++ DG VF WG+G
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Query: 455 -SSSISFHTPVLVTG--LSSHQIVDVSIGDSHVLAL 487
+PV +TG L + ++ VS G H + L
Sbjct: 379 TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 156/367 (42%), Gaps = 52/367 (14%)
Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQP---LPKRVPL 264
+P L L ++ EAG T L +G + +G +G LG +T+++ +P +V L
Sbjct: 59 KPALVPLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALG-RDTSVEGSEMVPGKVEL 117
Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
+ +V +S ++H +T +G V+ WG G ++ + + V
Sbjct: 118 QEKVVQVSAG---DSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAPV 174
Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH--------GD--------------LKSR 362
+V++G+ H +T DG LYT G G+ G+LG G LKSR
Sbjct: 175 VKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSR 234
Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
T V D CG T +S++GH V+ G N +LG TG P+ + +
Sbjct: 235 GTRGRV-RFQDA---FCGAYFTFAISREGH-VYGFGLSNYHQLGTPGTGSCFIPQNLTSF 289
Query: 423 RKFRVRKV--CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
+ V G +V + +G + G LGL + P L++ L +
Sbjct: 290 KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV--V 347
Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDNFS-NPVDQPSKVVGLEDVCVRQIC 531
V+ G S A+S+ V+AWG T Q GQD + +PV+ K LE+ V +
Sbjct: 348 SSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQ--LENRVVLTVS 405
Query: 532 AGSLFSI 538
+G ++
Sbjct: 406 SGGQHTV 412
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 131/327 (40%), Gaps = 41/327 (12%)
Query: 79 LRQTVTSTSPKADKTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACL 138
L++ V S T + RV L S N + LLE + + QV L A +
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DAPV 174
Query: 139 VYLI-----LVTLADDNIKPLGDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTW 193
V + LV L +D GD + P+L N G ++
Sbjct: 175 VKVASGNDHLVMLTND-----GDLYTLGCGEQGQLGRVPELFANRGGRQ---GLGRLLVP 226
Query: 194 GCNLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-----WL 248
C +L + RG R R Q G + TF + G VYG G L
Sbjct: 227 RC-----VLLKSRGTRGRVRFQD-------AFCGAYFTFAISREG--HVYGFGLSNYHQL 272
Query: 249 GLANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTL 307
G T +P+ + + + S + H + + SEG+ YS G E+G+LG G
Sbjct: 273 GTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGA 332
Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
++ ++ L V+ V+ G S AV++DG ++ WG G + +LG G + +P
Sbjct: 333 EEKSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVE 390
Query: 368 VT----ELSDVGAVSCGESHTLVLSQD 390
+T E V VS G HT++L +D
Sbjct: 391 MTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 31/246 (12%)
Query: 264 LEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKR 323
L V VS AH L +T+EG+++SWG E G+LGHG+T P+LI L +
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIE-ALSHEA 201
Query: 324 VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT---LVTELSDVGAVSCG 380
+ + G +H+ A+T+ G ++ +GE G+LG G+ ++ P+ ++ + ++CG
Sbjct: 202 IVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGN-QTDAVPSPAQIMYNGQPITKMACG 260
Query: 381 ESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGK-VTTPKVIEALRKFRVRKVCAGTSFSVA 439
++++ G+ ++S G G+LGH GK + + IE + R+V + +
Sbjct: 261 AEFSMLMDCKGN-LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV----AIFIE 315
Query: 440 LTWDGLVFWWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSN 499
T DG + P +V + DV+ G +H L L V++WG
Sbjct: 316 KTKDGQI-------------LPVPNVV-------VRDVACGANHTLVLDSQKRVFSWGFG 355
Query: 500 TMGQCG 505
G+ G
Sbjct: 356 GYGRLG 361
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI-MGGLYGKRVTQVSAGHSHS 334
C H L + S+ V+SWG G +G+LGH + P+L+ + G+ TQ+ AG++ S
Sbjct: 335 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCS 394
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSD--VGAVSCGESHTLVLSQDGH 392
AV+E G L+ WG + R +S P V +L + +++CG+S +V + +
Sbjct: 395 FAVSEVGGLFFWGATNTSR------ESTMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 448
Query: 393 TVWSMGSGNLGKLGHED--TGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWD 443
W S G+LG+ D T + ++ L +V G S S+ + D
Sbjct: 449 ISWGP-SPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARD 500
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 142/349 (40%), Gaps = 61/349 (17%)
Query: 187 HSKVYTWGCNLHHQILDEVRGKCSRPRLQSLPSN--IRHIEAGQFCTFLLDSTGGLLVYG 244
K+++WG N Q+ + PRL S+ I G+ T L TG + +G
Sbjct: 166 EGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFG 225
Query: 245 K---GWLGLANTTIQPLPKRVPLEAAIV----SLSVSKCSEAHVLTVTSEGEVYSWGVGE 297
+ G LGL N T VP A I+ ++ C + + +G +YS+G E
Sbjct: 226 ENKMGQLGLGNQT-----DAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPE 280
Query: 298 HGKLGHGN---------------TLSQRRPKLIMGGLYGKR--------VTQVSAGHSHS 334
+G+LGH + L RR + + + V V+ G +H+
Sbjct: 281 YGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT 340
Query: 335 AAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT--ELSDVGA--VSCGESHTLVLSQD 390
+ +++WG G +GRLGH + K P LV + GA + G + + +S+
Sbjct: 341 LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSE- 399
Query: 391 GHTVWSMGSGNLGKLGHEDTGKVTT--PKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
G L G +T + +T PK ++ L +R+R + G S S+ + D
Sbjct: 400 --------VGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKS-SIIVAADESTIS 450
Query: 449 WGLGLRSSSISF--HTPVLVTGLSSHQIVD------VSIGDSHVLALSQ 489
WG + + H P T + +D V++G SH L +++
Sbjct: 451 WGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIAR 499
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 378 SCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFS 437
SC +H+L+++ +G +WS G G+LGH DT +V P++IEAL + G + +
Sbjct: 155 SCA-AHSLLITTEGK-LWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 212
Query: 438 VALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYN 491
+ALT G VF +G LGL + + + +P + + I ++ G + +
Sbjct: 213 LALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIM-YNGQPITKMACGAEFSMLMDCKG 271
Query: 492 EVYAWGSNTMGQCGQDN 508
+Y++G GQ G ++
Sbjct: 272 NLYSFGCPEYGQLGHNS 288
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 416 PKVIEALRKFRVRKVCAGT--SFSVALTWDGLVFWWGLGLRSS-----SISFHTPVLVTG 468
P L RVR V +G+ + S+ +T +G ++ WG + + P L+
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEA 196
Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVR 528
LS IV + G +H LAL+ V+A+G N MGQ G N ++ V P++++ +
Sbjct: 197 LSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITK 256
Query: 529 QICAGSLFSI 538
C G+ FS+
Sbjct: 257 MAC-GAEFSM 265
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 91/186 (48%), Gaps = 16/186 (8%)
Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
SH + TE GL+ T G+GD G+LG G+ + R P LV L DV G HT+ L+Q
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGGMHTVCLNQS 85
Query: 391 GHTVWSMGSGNLGKLGHEDT--GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
G V+S G + G LG + + G P +E K V +V AG S + ALT DG VF
Sbjct: 86 GQ-VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFL 142
Query: 449 WG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
WG +GL PV V +V V+ G+ H++ L+ ++Y G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDMPVVKVASGNDHLVMLTTDGDLYTLGCGE 200
Query: 501 MGQCGQ 506
GQ G+
Sbjct: 201 QGQLGR 206
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 43/341 (12%)
Query: 188 SKVYTWGCNLHHQILDE--VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
+VY++GCN + + V G P L + + AG T L G + ++G
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS 145
Query: 245 ----KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
G +GL + + P +V L+ +V ++ H++ +T++G++Y+ G GE G
Sbjct: 146 FRDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVA---SGNDHLVMLTTDGDLYTLGCGEQG 202
Query: 300 KLGHGNTLSQRR-----------PKLIM---GGLYGK-RVTQVSAGHSHSAAVTEDGLLY 344
+LG L R PK ++ G G+ R G + A++ +G +Y
Sbjct: 203 QLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVY 262
Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD-----VGAVSCGESHTLVLSQDGHTVWSMGS 399
+G ++ +LG S P +T + VG S G+ HT+ + +G +S+G
Sbjct: 263 GFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVG-FSGGQHHTICMDSEGKA-YSLGR 320
Query: 400 GNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR---- 454
G+LG E + + P +I L V V G S A++ DG VF WG+G
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLISRLPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQLG 378
Query: 455 -SSSISFHTPVLVTG--LSSHQIVDVSIGDSHVLALSQYNE 492
+PV +TG L + ++ VS G H + L + E
Sbjct: 379 TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDKE 419
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 38/290 (13%)
Query: 246 GWLGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
G LGL + ++ P VPL +V ++ H + + G+VYS+G + G LG
Sbjct: 46 GQLGLGESVLERKKPALVPLLQDVVQ---AEAGGMHTVCLNQSGQVYSFGCNDEGALGRD 102
Query: 305 NTL--SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLGHGD-L 359
++ S+ P + ++V QVSAG SH+AA+TEDG ++ WG ++G +G + +
Sbjct: 103 TSVEGSEMVPGKVE---LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPM 159
Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL-----------GHE 408
K P V V V+ G H ++L+ DG ++++G G G+L G +
Sbjct: 160 KKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGD-LYTLGCGEQGQLGRVPELFANRGGRQ 218
Query: 409 DTGKVTTPKVI-----EALRKFRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
++ PK + + + R + G + A++ +G V+ +G LG ++
Sbjct: 219 GLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTA 278
Query: 458 ISFHTPVLVTGL--SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
F P +T S+ V S G H + + + Y+ G G+ G
Sbjct: 279 SCF-IPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLG 327
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 161/373 (43%), Gaps = 64/373 (17%)
Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQP---LPKRVPL 264
+P L L ++ EAG T L+ +G + +G +G LG +T+++ +P +V L
Sbjct: 59 KPALVPLLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALG-RDTSVEGSEMVPGKVEL 117
Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGV--GEHGKLG----HGNTLSQRRPKLIMGG 318
+ +V +S ++H +T +G V+ WG +G +G ++ + +L M
Sbjct: 118 QEKVVQVSAG---DSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDM-- 172
Query: 319 LYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH--------GD------------ 358
V +V++G+ H +T DG LYT G G+ G+LG G
Sbjct: 173 ----PVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKC 228
Query: 359 --LKSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTP 416
LKSR + V D CG T +S++GH V+ G N +LG T P
Sbjct: 229 VLLKSRGSRGRV-RFQDA---FCGAYLTFAISREGH-VYGFGLSNYHQLGTPGTASCFIP 283
Query: 417 KVIEALRKFRVRKV--CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTG 468
+ + + + V G ++ + +G + G LGL + P L++
Sbjct: 284 QNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR 343
Query: 469 LSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDNFS-NPVDQPSKVVGLEDV 525
L + V+ G S A+S+ V+AWG T Q GQD + +PV+ K LE+
Sbjct: 344 LPV--VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQ--LENR 399
Query: 526 CVRQICAGSLFSI 538
V + +G ++
Sbjct: 400 VVLTVSSGGQHTV 412
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 131/325 (40%), Gaps = 37/325 (11%)
Query: 79 LRQTVTSTSPKADKTVQSSLRSRVPLTKSLPPYNAALNLLEEVLRPATHYQVDLIRSACL 138
L++ V S T + RV L S N + LLE + + QV L
Sbjct: 117 LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLD----- 171
Query: 139 VYLILVTLADDNIKPL---GDRKSSNSNTDIDSTSTPKLTYNIGDTDISVAHSKVYTWGC 195
+ ++ V +D++ L GD + P+L N G ++ C
Sbjct: 172 MPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQ---GLERLLVPKC 228
Query: 196 NLHHQILDEVRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYGKG-----WLGL 250
+L + RG R R Q G + TF + G VYG G LG
Sbjct: 229 -----VLLKSRGSRGRVRFQD-------AFCGAYLTFAISREG--HVYGFGLSNYHQLGT 274
Query: 251 ANTTIQPLPKRV-PLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
T +P+ + + + S + H + + SEG+ YS G E+G+LG G +
Sbjct: 275 PGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
+ ++ L V+ V+ G S AV++DG ++ WG G + +LG G + +P +T
Sbjct: 335 KSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMT 392
Query: 370 ----ELSDVGAVSCGESHTLVLSQD 390
E V VS G HT++L +D
Sbjct: 393 GKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium
discoideum GN=gefC PE=2 SV=1
Length = 1457
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 75/318 (23%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGH--------------------------------GNTL 307
H++ +T G V++WG +G+LG+ +
Sbjct: 344 HIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSASSSSPSSSSLQ 403
Query: 308 SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTL 367
+ PK++ K V ++ G ++AA+TE G LY WG +HG LG GD R TPT
Sbjct: 404 TTCTPKMVEI----KCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTR 459
Query: 368 VTELSD--VGAVSCGESHTLVLSQDGHT-VWSMGSGNLGK-------------LGHEDTG 411
V L + V ++C +H+ ++ G VW S GK L E
Sbjct: 460 VIRLKNEVVSTIACSSTHSACYTESGKMYVWGQ-SDETGKIQAIPSPLPIHSYLDREIKS 518
Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGL-GLRSSSISFHTPV-LVTGL 469
+++++ G LT G VF W + G+ P+ L L
Sbjct: 519 PNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGI---------PIPLRNAL 569
Query: 470 SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL------- 522
+H + ++ +G+ H++ L+ EV G N GQ G+ + N +P V L
Sbjct: 570 ENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGRTDAEN---EPGIVKQLSFDPDGL 626
Query: 523 -EDVCVRQICAGSLFSIA 539
D V I AG S+A
Sbjct: 627 NSDEFVVSIAAGEFHSVA 644
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 474 IVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
I V++G+ H++ L++ V+ WGSN+ GQ G
Sbjct: 335 IKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 91/186 (48%), Gaps = 16/186 (8%)
Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHGD-LKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
SH + TE GL+ T G+GD G+LG G+ + R P LV+ DV G HT+ LS+
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKS 85
Query: 391 GHTVWSMGSGNLGKLGHEDT--GKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
G V+S G + G LG + + G P +E K V +V AG S + ALT DG VF
Sbjct: 86 GQ-VYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFL 142
Query: 449 WG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
WG +GL PV V +V V+ G+ H++ L+ ++Y G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQ--LDVPVVKVASGNDHLVMLTADGDLYTLGCGE 200
Query: 501 MGQCGQ 506
GQ G+
Sbjct: 201 QGQLGR 206
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 188 SKVYTWGCNLHHQILDE--VRGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG- 244
+VY++GCN + + V G P L + + AG T L G + ++G
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS 145
Query: 245 ----KGWLGLANTTIQPL-PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
G +GL + + P +V L+ +V ++ H++ +T++G++Y+ G GE G
Sbjct: 146 FRDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVA---SGNDHLVMLTADGDLYTLGCGEQG 202
Query: 300 KLGHGNTLSQRR-----------PKLIM----GGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
+LG L R PK +M G R G + A++ +G +Y
Sbjct: 203 QLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY 262
Query: 345 TWGEGDHGRLGHGDLKSRHTPTLVTELSD-----VGAVSCGESHTLVLSQDGHTVWSMGS 399
+G ++ +LG +S P +T + VG S G+ HT+ + +G +S+G
Sbjct: 263 GFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVG-FSGGQHHTVCMDSEG-KAYSLGR 320
Query: 400 GNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR---- 454
G+LG E + + P +I L V V G S A+T DG VF WG+G
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQLG 378
Query: 455 -SSSISFHTPVLVTG--LSSHQIVDVSIGDSHVLALSQYNE 492
+PV + G L + ++ VS G H + L + E
Sbjct: 379 TGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKE 419
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 52/367 (14%)
Query: 211 RPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLGLANTTIQP---LPKRVPL 264
+P L S+P ++ EAG T L +G + +G +G LG +T+++ +P +V L
Sbjct: 59 KPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALG-RDTSVEGSEMVPGKVEL 117
Query: 265 EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRV 324
+ +V +S ++H +T +G V+ WG G ++ + + V
Sbjct: 118 QEKVVQVSAG---DSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPV 174
Query: 325 TQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGH--------GD--------------LKSR 362
+V++G+ H +T DG LYT G G+ G+LG G LKSR
Sbjct: 175 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSR 234
Query: 363 HTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEAL 422
+ V D CG T +S +GH V+ G N +LG T P+ + +
Sbjct: 235 GSRGHV-RFQDA---FCGAYFTFAISHEGH-VYGFGLSNYHQLGTPGTESCFIPQNLTSF 289
Query: 423 RKFRVRKV--CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQI 474
+ V G +V + +G + G LGL + P L++ L + +
Sbjct: 290 KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPA--V 347
Query: 475 VDVSIGDSHVLALSQYNEVYAWGSNTMGQ--CGQDNFS-NPVDQPSKVVGLEDVCVRQIC 531
V+ G S A+++ V+AWG T Q GQD + +PV+ K LE+ V +
Sbjct: 348 SSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQ--LENRVVLSVS 405
Query: 532 AGSLFSI 538
+G ++
Sbjct: 406 SGGQHTV 412
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 246 GWLGLA-NTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
G LGL N + P V + +V ++ H + ++ G+VYS+G + G LG
Sbjct: 46 GQLGLGENVMERKKPALVSIPEDVVQ---AEAGGMHTVCLSKSGQVYSFGCNDEGALGRD 102
Query: 305 NTL--SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLGHGD-L 359
++ S+ P + ++V QVSAG SH+AA+T+DG ++ WG ++G +G + +
Sbjct: 103 TSVEGSEMVPGKVE---LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPM 159
Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL-----------GHE 408
K P V V V+ G H ++L+ DG ++++G G G+L G +
Sbjct: 160 KKSMVPVQVQLDVPVVKVASGNDHLVMLTADG-DLYTLGCGEQGQLGRVPELFANRGGRQ 218
Query: 409 DTGKVTTPKVIEALRK-----FRVRKVCAGTSFSVALTWDGLVFWWG------LGLRSSS 457
++ PK + + R + G F+ A++ +G V+ +G LG +
Sbjct: 219 GLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTE 278
Query: 458 ISFHTPVLVTGL--SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG 505
F P +T S+ V S G H + + + Y+ G G+ G
Sbjct: 279 SCF-IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLG 327
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMG 398
+YTWG+ + LGHG S+H P LV S G V + H++ LSQ G V++ G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQ-VYTCG 202
Query: 399 SGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGL----- 453
G G+LGH D P+++E L +V A +V LT DG V+ +GL +
Sbjct: 203 HGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLG 262
Query: 454 ---RSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCG---QD 507
SS + + L I+ V+ G H + ++ VY G N GQ G
Sbjct: 263 IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTR-EAVYTMGLNG-GQLGCLLDP 320
Query: 508 NFSNPVDQPSKVVGL--EDVCVRQICAGSLFSIAYT 541
N V P +V L +D+ + + A ++ T
Sbjct: 321 NGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVT 356
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 281 VLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLI----MGGLYGKRVTQVSAGHSHSAA 336
V T +VY+WG + LGHG+ S+ P+L+ G+Y + QV HS
Sbjct: 135 VFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIY---IKQVVLCKFHSVF 191
Query: 337 VTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELS--DVGAVSCGESHTLVLSQDGHTV 394
+++ G +YT G G GRLGHGD ++ P LV L+ + V+ + HT+VL++DG V
Sbjct: 192 LSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDG-CV 250
Query: 395 WSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
++ G +L G + P R+ + + + T VA V W
Sbjct: 251 YTFGLNIFHQL-----GIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLW 299
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 22/245 (8%)
Query: 280 HVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTE 339
H + ++ +G+VY+ G G G+LGHG+ + P+L+ GL G +QV+A H+ +TE
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVE-GLNGHNCSQVAAAKDHTVVLTE 246
Query: 340 DGLLYTWGEGDHGRLGHGDLKS-----RHTPTLVTELSDVGAVSCGESHTLVLSQDGHTV 394
DG +YT+G +LG S R + + V+ G HT++ +++
Sbjct: 247 DGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYT 306
Query: 395 WSMGSGNLGKLGHEDTGK-VTTPKVIEAL--RKFRVRKVCAGTSFSVALTWDGLVF---- 447
+ G LG L + K VT P+ + AL + + V A +V +T G ++
Sbjct: 307 MGLNGGQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLAD 366
Query: 448 WWGLGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSH------VLALSQYNEVYAWGS--N 499
+ + S ++ VLV+G VD + +LA+ V+ W S +
Sbjct: 367 YQCKKMASKQLNLKK-VLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRSVNS 425
Query: 500 TMGQC 504
++ QC
Sbjct: 426 SLKQC 430
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 116/267 (43%), Gaps = 22/267 (8%)
Query: 257 PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG---NTLSQRRPK 313
PLP P E ++ +S C AH L +T V+S G HG+ G + + K
Sbjct: 162 PLPLDRPQETKVLQVS---CGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHK 218
Query: 314 LIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPT-LVTELS 372
+ + +V QV G HS +T+ G +Y+ G G G+ G G TP+ L +L+
Sbjct: 219 VHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLA 278
Query: 373 DVGAVSCGE--SHTLVLSQDGHTVWSMGSGNLGKLGH-EDTGKVTTPKVIEALRKFRVRK 429
V V L LS DG V+ G+ +L D+ +V P+ + +V++
Sbjct: 279 GVTVVQVATYGDCCLALSADG-GVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQ 337
Query: 430 VCAGTSFSVALTWDGLVFWWGLG-------LRSSSISFHTPVLVTGLSSH----QIVDVS 478
V G + L +G VF WG G L ++I P + GL+ Q+ +
Sbjct: 338 VACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIR 397
Query: 479 IGDSHVLALSQYNEVYAWGSNTMGQCG 505
G SH AL+ E++ WG N G G
Sbjct: 398 CGLSHFAALTNKGELFVWGKNIRGCLG 424
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 230 CTFLLDSTGGLLVYGKG-WLGLANTTIQP---LPKRVPLEAAIVSLSVSKCSEAHVLTVT 285
C L + GG+ +G +L LA+ T +P+ +P + + + C +
Sbjct: 291 CCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPF-SGVGKVKQVACGGTGCAVLN 349
Query: 286 SEGEVYSWGVGEHGKLGHGNTLSQRR-PKLIMGGLYG-------KRVTQVSAGHSHSAAV 337
+EG V+ WG +G LG G L + P++I L+G +V+Q+ G SH AA+
Sbjct: 350 AEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAAL 406
Query: 338 TEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVGAVSCGESHTLVLSQ 389
T G L+ WG+ G LG G L+ ++ P VT + V+CG H + L++
Sbjct: 407 TNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPVDVACGVDHMVTLAK 458
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 19/229 (8%)
Query: 276 CSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSA 335
C + H L +T +GEVYS G G G+ G G+ P + G L G V QV+
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 336 AVTEDGLLYTWGEGDHGRLGH-GDLKSRHTPTLV--TELSDVGAVSCGESHTLVLSQDGH 392
A++ DG ++ WG ++ +L D + P + + + V V+CG + VL+ +GH
Sbjct: 294 ALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGH 353
Query: 393 T-VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKF----RVRKVCAGTSFSVALTWDGLVF 447
VW G G E P + L +F +V ++ G S ALT G +F
Sbjct: 354 VFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELF 413
Query: 448 WWGLGLRS-------SSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
WG +R F V + G + VDV+ G H++ L++
Sbjct: 414 VWGKNIRGCLGIGRLEDQYFPWRVTMPG----EPVDVACGVDHMVTLAK 458
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGH---EDTGKVTTPKVIEALRKF--RVRKVC 431
VSCG +H+LVL+ D V+SMG+ + G+ G ED + KV ++ F +V +V
Sbjct: 176 VSCGRAHSLVLT-DREGVFSMGNNSHGQCGRKVVEDEVYSESHKV-HRMQDFDGQVVQVV 233
Query: 432 AGTSFSVALTWDGLVFWWGLGLRSSSISFH-----TPVLVTG-LSSHQIVDVSIGDSHVL 485
G S+ LT G V+ G G + H TP + G L+ +V V+ L
Sbjct: 234 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 486 ALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
ALS V+ WG++ Q S V+ P
Sbjct: 294 ALSADGGVFGWGNSEYLQLASVTDSTQVNVP 324
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 19/77 (24%)
Query: 449 WGLGL-RSSSISFH------------------TPVLVTGLSSHQIVDVSIGDSHVLALSQ 489
WG+GL + S + FH P+ + +++ VS G +H L L+
Sbjct: 129 WGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTD 188
Query: 490 YNEVYAWGSNTMGQCGQ 506
V++ G+N+ GQCG+
Sbjct: 189 REGVFSMGNNSHGQCGR 205
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 30/221 (13%)
Query: 255 IQPLPKRVPL--EAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRP 312
IQ P +VP + IV L+ K H+L + EG V++WG G+ +LG + + R
Sbjct: 208 IQKTPWKVPTFSKYNIVQLAPGK---DHILFLDEEGMVFAWGNGQQNQLGR-KVMERFRL 263
Query: 313 KLIMGGLYGKR-VTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLG------HGDLKSRHTP 365
K + +G R V +++G +H A+T+D L +WG G+ G G L ++
Sbjct: 264 KTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKR 323
Query: 366 TLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKLG--------------HEDTG 411
+ + + +++ GE H+L+LSQDG ++S G ++ ++G H
Sbjct: 324 LALPDNVVIRSIAAGEHHSLILSQDG-DLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKAR 382
Query: 412 KVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLG 452
V P + + KF + V AG+ SVA+ +G+ + WG G
Sbjct: 383 AVPLPTKLNNVPKF--KSVAAGSHHSVAVAQNGIAYSWGFG 421
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 30/290 (10%)
Query: 286 SEGEVYSWGVGE--HGKLG-HGNTLSQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGL 342
S GEVY+WG G LG + + + ++ + + Q++ G H + E+G+
Sbjct: 182 SNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGM 241
Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTE---LSDVGAVSCGESHTLVLSQDGHTVWSMGS 399
++ WG G +LG ++ TL L V ++ GE+H L++D V S G
Sbjct: 242 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLV-SWGL 300
Query: 400 GNLGKLG----HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG----- 450
G+ G ED VT PK + +R + AG S+ L+ DG ++ G
Sbjct: 301 NQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMF 360
Query: 451 -LGLRSSSISFHTPVLVTGLSSH-----------QIVDVSIGDSHVLALSQYNEVYAWGS 498
+G+ ++ +T V G + + V+ G H +A++Q Y+WG
Sbjct: 361 EVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGF 420
Query: 499 NTMGQCGQDNFSNPVDQPSKV--VGLEDVCVRQICAGSLFSIAYTVPPSN 546
G F + + P+++ +D + + G FS++ V S+
Sbjct: 421 GETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSVSGGVKLSD 470
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 47/297 (15%)
Query: 289 EVYSWGVGEHGKLGHG---NTLSQRRPKL-IMGGLYGKRVTQVSAGHSHSAAVTEDGLLY 344
+++ WG G +LG G +RP+L ++ + G H+ A+ E+ ++
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVW 106
Query: 345 TWGEGDHGRLGHGDLKSRH-----------------------TPTLV--------TELSD 373
+WG D G LG ++ TP + E
Sbjct: 107 SWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHK 166
Query: 374 VGAVSCGESHTLVLSQDGHT-VWSMGSGNLGKLG-HEDTGKV-TTPKVIEALRKFRVRKV 430
V ++ ++ + L +G W N G LG ++D K+ TP + K+ + ++
Sbjct: 167 VVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQL 226
Query: 431 CAGTSFSVALTWDGLVFWWGLGL-----RSSSISFHTPVL-VTGLSSHQIVDVSIGDSHV 484
G + L +G+VF WG G R F L + ++ G++H
Sbjct: 227 APGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHC 286
Query: 485 LALSQYNEVYAWGSNTMGQCG-QDNFSNP--VDQPSKVVGLEDVCVRQICAGSLFSI 538
AL++ N++ +WG N GQCG ++ + V +P ++ ++V +R I AG S+
Sbjct: 287 FALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSL 343
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 190 VYTWGCNLHHQILDEVRGKCSRPRLQSLPSNIRHIE---AGQFCTFLLDSTGGLLVYGKG 246
V+ WG +Q+ +V + L P +RH++ +G+ F L L+ +G
Sbjct: 242 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLN 301
Query: 247 WLG-------LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHG 299
G + + + PKR+ L +V S++ E H L ++ +G++YS G +
Sbjct: 302 QFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIA-AGEHHSLILSQDGDLYSCGRLDMF 360
Query: 300 KLGHGNTLSQRRPKLIMGGLYGK--------------RVTQVSAGHSHSAAVTEDGLLYT 345
++G P+ ++GK + V+AG HS AV ++G+ Y+
Sbjct: 361 EVG---IPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYS 417
Query: 346 WGEGDHGRLGHGDLKSR-HTPTLV----TELSDVGAVSCG 380
WG G+ +G G + PT + T+ ++ V CG
Sbjct: 418 WGFGETYAVGLGPFEDDTEVPTRIKNTATQDHNIILVGCG 457
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 42/337 (12%)
Query: 186 AHSKVYTWGCNLHHQILDEV--RGKCSRPRLQSLPSNIRHIEAGQFCTFLLDSTGGLLVY 243
A +YT+GCN + + G +P L + + AG T L G + V+
Sbjct: 90 ASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVF 149
Query: 244 G-----KGWLGLANTTIQPLPKR-VPLEAAIVSLSVSKCS-EAHVLTVTSEGEVYSWGVG 296
G G +GL ++P+ K VP++ I + + S H++ +T +G++Y+ G G
Sbjct: 150 GSFRDNNGVIGL----LEPMKKSMVPVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCG 205
Query: 297 EHGKLGH--------GNTLSQRR---PKLIMGGLYGK-RV--TQVSAGHSHSAAVTEDGL 342
E G+LG G R P+ I G RV V G + AV+++G
Sbjct: 206 EQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGH 265
Query: 343 LYTWGEGDHGRLGHGDLKSRHTPTLVTELSDVG----AVSCGESHTLVLSQDGHTVWSMG 398
+Y +G ++ +LG + ++ + P +T + S G+ HT+ + +G +S+G
Sbjct: 266 VYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGK-AYSLG 324
Query: 399 SGNLGKLG-HEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWGLGLR--- 454
G+LG E+ + + P I L K + V +G S S A++ DG VF WG+G
Sbjct: 325 RAEYGRLGLGENAEEQSEPTPIPDLPK--INSVASGASVSYAVSTDGCVFAWGMGTNLQL 382
Query: 455 --SSSISFHTPVLVTG--LSSHQIVDVSIGDSHVLAL 487
+P +TG L +++ VS G H + L
Sbjct: 383 GTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLL 419
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 18/193 (9%)
Query: 332 SHSAAVTEDGLLYTWGEGDHGRLGHG-DLKSRHTPTLVTELSDVGAVSCGESHTLVLSQD 390
+H + T G + T G+GD G+LG G D+ R P LVT D+ + G HT+ L
Sbjct: 32 THPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIVQAAAGGMHTVCLGAS 91
Query: 391 GHTVWSMGSGNLGKLGHE--DTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFW 448
G ++++ G + G LG + + G P +E K V +V AG S + ALT DG VF
Sbjct: 92 G-SIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEK--VVQVSAGDSHTAALTEDGRVFV 148
Query: 449 WG--------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNT 500
+G +GL PV V + ++ ++ G+ H++ L+ ++Y G
Sbjct: 149 FGSFRDNNGVIGLLEPMKKSMVPVQVQ--INTPVIKIASGNDHLVLLTVDGDLYTSGCGE 206
Query: 501 MGQCGQ--DNFSN 511
GQ G+ + F+N
Sbjct: 207 QGQLGRVPERFTN 219
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 41/326 (12%)
Query: 246 GWLGLANTTIQ-PLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHG 304
G LGL ++ P V L IV + H + + + G +Y++G + G LG
Sbjct: 52 GQLGLGEDIMERKKPALVTLTEDIVQAAAGGM---HTVCLGASGSIYTFGCNDEGALGRD 108
Query: 305 NTL--SQRRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWG--EGDHGRLGHGD-L 359
+ S+ +P + ++V QVSAG SH+AA+TEDG ++ +G ++G +G + +
Sbjct: 109 TSEEGSEMQPGKVE---LAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPM 165
Query: 360 KSRHTPTLVTELSDVGAVSCGESHTLVLSQDGHTVWSMGSGNLGKL-----------GHE 408
K P V + V ++ G H ++L+ DG +++ G G G+L G +
Sbjct: 166 KKSMVPVQVQINTPVIKIASGNDHLVLLTVDGD-LYTSGCGEQGQLGRVPERFTNRGGRK 224
Query: 409 DTGKVTTPKVIEALRKFRVR----KVCAGTSFSVALTWDGLVFWWG------LGLRSSSI 458
++ P+ I K R V G F+ A++ +G V+ +G LG +++
Sbjct: 225 GLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQA 284
Query: 459 SFHTPVLVTGL--SSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQP 516
+ P +T S+ + S G H + + + Y+ G G+ G + +P
Sbjct: 285 CY-APQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEP 343
Query: 517 SKVVGLEDVCVRQICAGSLFSIAYTV 542
+ + L + + +G+ S++Y V
Sbjct: 344 TPIPDLPK--INSVASGA--SVSYAV 365
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 171/418 (40%), Gaps = 51/418 (12%)
Query: 158 KSSNSNTDIDSTST-PKLTY----NIGDTDISVAHSKVYTWGCNLHHQILDEVRGKCSRP 212
+ SN +D+ T P +T+ +G +++ V G L I++ +P
Sbjct: 14 EESNGTSDVKKTKALPIVTHPSHGTVGGQVLTLGQGDVGQLG--LGEDIMER-----KKP 66
Query: 213 RLQSLPSNIRHIEAGQFCTFLLDSTGGLLVYG---KGWLG--LANTTIQPLPKRVPLEAA 267
L +L +I AG T L ++G + +G +G LG + + P +V L
Sbjct: 67 ALVTLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEK 126
Query: 268 IVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPKLIMGGLYGKRVTQV 327
+V +S ++H +T +G V+ +G G ++ + + V ++
Sbjct: 127 VVQVSAG---DSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQINTPVIKI 183
Query: 328 SAGHSHSAAVTEDGLLYTWGEGDHGRLGH--------GDLKS--RHTPTLVTELSDVGA- 376
++G+ H +T DG LYT G G+ G+LG G K R L G+
Sbjct: 184 ASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSG 243
Query: 377 ------VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKV 430
V CG T +SQ+GH V+ G N +LG ++T P+ + + + +
Sbjct: 244 RVHFQDVFCGAYFTFAVSQEGH-VYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWI 302
Query: 431 --CAGTSFSVALTWDGLVFWWG------LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDS 482
G +V + +G + G LGL ++ P + L +I V+ G S
Sbjct: 303 GFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLP--KINSVASGAS 360
Query: 483 HVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVG--LEDVCVRQICAGSLFSI 538
A+S V+AWG T Q G + V P ++ G LED V + +G ++
Sbjct: 361 VSYAVSTDGCVFAWGMGTNLQLGTGEEED-VWSPEQMTGKHLEDREVLSVSSGGQHTV 417
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 250 LANTTIQPLPKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQ 309
L+ + + L K ++ V L+ + EA L + EV++WG G+ G+LGHG+ L +
Sbjct: 482 LSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPR 541
Query: 310 RRPKLIMGGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLVT 369
+P L + L GK V + AG SHS A+T +Y+WG G+LGH + PT V
Sbjct: 542 LQP-LCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEF-----PTTVP 595
Query: 370 ELSDVG------AVSCGESHTLVL 387
LS V +V+ G+ ++L L
Sbjct: 596 RLSKVSSENGVWSVAAGQDYSLFL 619
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 259 PKRVPLEAAIVSLSVSKCSEAHVLTVTSEGEVYSWGVGEHGKLGHGNTLSQRRPK--LIM 316
P+R+P L + H + +T +GEVYS+G L + ++ P L+
Sbjct: 32 PERLPGWGGKTVLQAA-LGVRHGVLLTEDGEVYSFGT-----LPWKSESAEICPSSPLLE 85
Query: 317 GGLYGKRVTQVSAGHSHSAAVTEDGLLYTWGEGDHGRLGHGDLKSRHTPTLV----TELS 372
L G V V+ G HS AVTE G++Y WGE G+ + + P+ V +E S
Sbjct: 86 SALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETS 145
Query: 373 DVGAV-----SCGESHTLVLSQDGHTVWSMGSG-NLGKLGHEDTGKVTTPKVIEALRKFR 426
AV +CGE HTL LS +W+ G+G LG + T VT P+ +E L
Sbjct: 146 PSLAVRILQLACGEEHTLALSLS-REIWAWGTGCQLGLI--TTTFPVTKPQKVEHLAGRV 202
Query: 427 VRKVCAGTSFSVAL 440
V +V G S+AL
Sbjct: 203 VLQVACGAFHSLAL 216
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 377 VSCGESHTLVLSQDGHTVWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSF 436
+ G H ++L++DG V+S G+ E ++P + AL V V G+
Sbjct: 46 AALGVRHGVLLTEDGE-VYSFGTLPWKSESAEIC--PSSPLLESALVGHHVITVATGSFH 102
Query: 437 SVALTWDGLVFWWGLGLRSSS-------ISFHTPVLVTGLSSH-----QIVDVSIGDSHV 484
S A+T G+V+ WG + +PV ++ + +I+ ++ G+ H
Sbjct: 103 SGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHT 162
Query: 485 LALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGLEDVCVRQICAGSLFSIAYT--V 542
LALS E++AWG+ Q G + PV +P KV L V Q+ G+ S+A +
Sbjct: 163 LALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCL 220
Query: 543 PPSN 546
PP +
Sbjct: 221 PPQD 224
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 463 PVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFSNPVDQPSKVVGL 522
P+ V L +++ + G SH LAL+ ++VY+WGSNT GQ G F V + SKV
Sbjct: 544 PLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQLGHSEFPTTVPRLSKVS-- 601
Query: 523 EDVCVRQICAGSLFSI 538
+ V + AG +S+
Sbjct: 602 SENGVWSVAAGQDYSL 617
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 394 VWSMGSGNLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG--- 450
VW GS +L TP+ + V + G V LT DG V+ +G
Sbjct: 22 VWQAGSFSL------------TPERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGTLP 69
Query: 451 LGLRSSSISFHTPVLVTGLSSHQIVDVSIGDSHVLALSQYNEVYAWGSNTMGQCGQDNFS 510
S+ I +P+L + L H ++ V+ G H A+++ VY WG N GQC N
Sbjct: 70 WKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVAN-Q 128
Query: 511 NPVDQPSKV 519
V +PS V
Sbjct: 129 QYVPEPSPV 137
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 348 EGDHGRLGHGDLKSRHTPTLVTELSDVGAVSC-------GESHTLVLSQDGHTVWSMGSG 400
EG RL L S+ +P L+ + + V + GE+ L+ S VW+ G G
Sbjct: 470 EGGSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE-VWTWGKG 528
Query: 401 NLGKLGHEDTGKVTTPKVIEALRKFRVRKVCAGTSFSVALTWDGLVFWWG 450
G+LGH D P ++ L V + AG S S+ALT V+ WG
Sbjct: 529 KEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWG 578
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Query: 224 IEAGQFCTFLLDSTGGLLVYGK---GWLGLANTTIQPLPKRVPLEAAIVSLSVS------ 274
+ G F + + +G + ++G+ G +AN P P V + + S S++
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQL 155
Query: 275 KCSEAHVLTVTSEGEVYSWGVGEHGKLGH-GNTLSQRRPKLIMGGLYGKRVTQVSAGHSH 333
C E H L ++ E+++WG G +LG T +P+ + L G+ V QV+ G H
Sbjct: 156 ACGEEHTLALSLSREIWAWGTG--CQLGLITTTFPVTKPQKVE-HLAGRVVLQVACGAFH 212
Query: 334 SAAVTE 339
S A+ +
Sbjct: 213 SLALVQ 218
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 688,277,532
Number of Sequences: 539616
Number of extensions: 29697605
Number of successful extensions: 75964
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 74353
Number of HSP's gapped (non-prelim): 807
length of query: 1858
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1726
effective length of database: 120,340,147
effective search space: 207707093722
effective search space used: 207707093722
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)